Total number of alignments analysed in /home/sam/analyses/20180507_oly_methylseq_bismark/zr1394_6_s456_trimmed_bismark_bt2.bam: 354174 Total number duplicated alignments removed: 7527 (2.13%) Duplicated alignments were found at: 5757 different position(s) Total count of deduplicated leftover sequences: 346647 (97.87% of total)