Bismark Processing Report


Data processed at 15:02 on 2018-08-13


Sequences analysed in total 11654467
Single-end alignments with a unique best hit 4581756
Sequences without alignments under any condition 1541276
Sequences that did not map uniquely 5531435
Genomic sequence context not extractable (edges of chromosomes) 9178

Cytosine Methylation

Total C's analysed 25938456
Methylated C's in CpG context 995559
Methylated C's in CHG context 112417
Methylated C's in CHH context 1550012
Methylated C's in Unknown context 422
Unmethylated C's in CpG context 2519867
Unmethylated C's in CHG context 4659852
Unmethylated C's in CHH context 16100749
Unmethylated C's in Unknown context 4277
Percentage methylation (CpG context) 28.3%
Percentage methylation (CHG context) 2.4%
Percentage methylation (CHH context) 8.8%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 2080629 original top strand
CTOT 208122 complementary to original top strand
CTOB 208274 complementary to original bottom strand
OB 2075553 original bottom strand