Bismark Processing Report


Data processed at 15:02 on 2018-08-13


Sequences analysed in total 11555321
Single-end alignments with a unique best hit 4558848
Sequences without alignments under any condition 1568078
Sequences that did not map uniquely 5428395
Genomic sequence context not extractable (edges of chromosomes) 8921

Cytosine Methylation

Total C's analysed 25864841
Methylated C's in CpG context 1008114
Methylated C's in CHG context 77277
Methylated C's in CHH context 1449502
Methylated C's in Unknown context 404
Unmethylated C's in CpG context 2566173
Unmethylated C's in CHG context 4698459
Unmethylated C's in CHH context 16065316
Unmethylated C's in Unknown context 4356
Percentage methylation (CpG context) 28.2%
Percentage methylation (CHG context) 1.6%
Percentage methylation (CHH context) 8.3%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 2082412 original top strand
CTOT 194744 complementary to original top strand
CTOB 195969 complementary to original bottom strand
OB 2076802 original bottom strand