Bismark Processing Report


Data processed at 15:02 on 2018-08-13


Sequences analysed in total 11408856
Single-end alignments with a unique best hit 4536160
Sequences without alignments under any condition 1477731
Sequences that did not map uniquely 5394965
Genomic sequence context not extractable (edges of chromosomes) 8697

Cytosine Methylation

Total C's analysed 25520936
Methylated C's in CpG context 1016597
Methylated C's in CHG context 68499
Methylated C's in CHH context 1376350
Methylated C's in Unknown context 409
Unmethylated C's in CpG context 2445956
Unmethylated C's in CHG context 4625068
Unmethylated C's in CHH context 15988466
Unmethylated C's in Unknown context 4191
Percentage methylation (CpG context) 29.4%
Percentage methylation (CHG context) 1.5%
Percentage methylation (CHH context) 7.9%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 2075415 original top strand
CTOT 187772 complementary to original top strand
CTOB 188978 complementary to original bottom strand
OB 2075298 original bottom strand