Bismark Processing Report


Data processed at 15:02 on 2018-08-13


Sequences analysed in total 10113854
Single-end alignments with a unique best hit 3984767
Sequences without alignments under any condition 1329633
Sequences that did not map uniquely 4799454
Genomic sequence context not extractable (edges of chromosomes) 7873

Cytosine Methylation

Total C's analysed 22414088
Methylated C's in CpG context 854767
Methylated C's in CHG context 57383
Methylated C's in CHH context 1200345
Methylated C's in Unknown context 349
Unmethylated C's in CpG context 2163006
Unmethylated C's in CHG context 4071784
Unmethylated C's in CHH context 14066803
Unmethylated C's in Unknown context 3847
Percentage methylation (CpG context) 28.3%
Percentage methylation (CHG context) 1.4%
Percentage methylation (CHH context) 7.9%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 1824319 original top strand
CTOT 165565 complementary to original top strand
CTOB 166368 complementary to original bottom strand
OB 1820642 original bottom strand