Bismark Processing Report


Data processed at 15:02 on 2018-08-13


Sequences analysed in total 13949213
Single-end alignments with a unique best hit 5449339
Sequences without alignments under any condition 1876942
Sequences that did not map uniquely 6622932
Genomic sequence context not extractable (edges of chromosomes) 11076

Cytosine Methylation

Total C's analysed 30870373
Methylated C's in CpG context 1093598
Methylated C's in CHG context 91495
Methylated C's in CHH context 1695039
Methylated C's in Unknown context 496
Unmethylated C's in CpG context 3116289
Unmethylated C's in CHG context 5620981
Unmethylated C's in CHH context 19252971
Unmethylated C's in Unknown context 5381
Percentage methylation (CpG context) 26.0%
Percentage methylation (CHG context) 1.6%
Percentage methylation (CHH context) 8.1%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 2485153 original top strand
CTOT 235658 complementary to original top strand
CTOB 236212 complementary to original bottom strand
OB 2481240 original bottom strand