Bismark Processing Report


Data processed at 15:02 on 2018-08-13


Sequences analysed in total 77350922
Single-end alignments with a unique best hit 26345346
Sequences without alignments under any condition 19712667
Sequences that did not map uniquely 31292909
Genomic sequence context not extractable (edges of chromosomes) 49283

Cytosine Methylation

Total C's analysed 156026005
Methylated C's in CpG context 17546382
Methylated C's in CHG context 570521
Methylated C's in CHH context 7734020
Methylated C's in Unknown context 3538
Unmethylated C's in CpG context 4178806
Unmethylated C's in CHG context 30427182
Unmethylated C's in CHH context 95569094
Unmethylated C's in Unknown context 27742
Percentage methylation (CpG context) 80.8%
Percentage methylation (CHG context) 1.8%
Percentage methylation (CHH context) 7.5%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 5897854 original top strand
CTOT 7283883 complementary to original top strand
CTOB 7239281 complementary to original bottom strand
OB 5875045 original bottom strand