Bismark Processing Report


Data processed at 22:30 on 2018-09-13


Sequences analysed in total 9365330
Single-end alignments with a unique best hit 4948388
Sequences without alignments under any condition 1167257
Sequences that did not map uniquely 3249685
Genomic sequence context not extractable (edges of chromosomes) 12780

Cytosine Methylation

Total C's analysed 38161289
Methylated C's in CpG context 1531141
Methylated C's in CHG context 109076
Methylated C's in CHH context 1203167
Methylated C's in Unknown context 20550
Unmethylated C's in CpG context 4042220
Unmethylated C's in CHG context 7359622
Unmethylated C's in CHH context 23916063
Unmethylated C's in Unknown context 116752
Percentage methylation (CpG context) 27.5%
Percentage methylation (CHG context) 1.5%
Percentage methylation (CHH context) 4.8%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 2376810 original top strand
CTOT 89497 complementary to original top strand
CTOB 91166 complementary to original bottom strand
OB 2378135 original bottom strand