Bismark Processing Report


Data processed at 22:30 on 2018-09-13


Sequences analysed in total 11560658
Single-end alignments with a unique best hit 6120182
Sequences without alignments under any condition 1415586
Sequences that did not map uniquely 4024890
Genomic sequence context not extractable (edges of chromosomes) 15614

Cytosine Methylation

Total C's analysed 47056655
Methylated C's in CpG context 1889769
Methylated C's in CHG context 114764
Methylated C's in CHH context 1430716
Methylated C's in Unknown context 23580
Unmethylated C's in CpG context 4949099
Unmethylated C's in CHG context 9036311
Unmethylated C's in CHH context 29635996
Unmethylated C's in Unknown context 141728
Percentage methylation (CpG context) 27.6%
Percentage methylation (CHG context) 1.3%
Percentage methylation (CHH context) 4.6%
Methylated C's in Unknown context N/A%

Alignment to Individual Bisulfite Strands

OT 2943526 original top strand
CTOT 108115 complementary to original top strand
CTOB 108228 complementary to original bottom strand
OB 2944699 original bottom strand