15-12-21 20:59:01.059 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29=================== 15-12-21 20:59:01.060 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:01.060 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:01.061 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle=================== 15-12-21 20:59:01.062 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:01.062 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:01.062 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:01.063 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:01.119 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:01.120 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Selecting Reagent USB (5)=================== 15-12-21 20:59:01.120 -05 000000057 INF: Valve A2: Go to position 5 15-12-21 20:59:01.120 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 20:59:01.169 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:01.181 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 3\r 15-12-21 20:59:01.181 -05 000000057 INF: Valve A2: 209.663 seconds since last move, > 5.000 seconds required between moves 15-12-21 20:59:01.181 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 3 to 5 15-12-21 20:59:01.181 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW5\r 15-12-21 20:59:01.182 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 20:59:01.182 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 20:59:01.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:01.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:01.285 -05 000000056 INF: FPGA: Recv MIOCOMPF 15-12-21 20:59:01.285 -05 000000062 INF: Compensator: Moved IntoPath in 610 ms 15-12-21 20:59:01.286 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface=================== 15-12-21 20:59:01.352 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface=================== 15-12-21 20:59:01.366 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Aligning=================== 15-12-21 20:59:01.367 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Aligning=================== 15-12-21 20:59:01.368 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Aligning=================== 15-12-21 20:59:01.402 -05 000000045 INF: ===================Move Tilt Motor 3=================== 15-12-21 20:59:01.402 -05 000000090 INF: ===================Move Tilt Motor 1=================== 15-12-21 20:59:01.402 -05 000000040 INF: ===================Move Tilt Motor 2=================== 15-12-21 20:59:01.402 -05 000000045 INF: Tilt Motor 3: Moving to 5.5758 mm, started at 5.4102 mm, delta = 0.1656 mm 15-12-21 20:59:01.402 -05 000000045 INF: FPGA: Xmit T3RD\n 15-12-21 20:59:01.402 -05 000000090 INF: Tilt Motor 1: Moving to 5.3599 mm, started at 5.5245 mm, delta = -0.1646 mm 15-12-21 20:59:01.402 -05 000000040 INF: Tilt Motor 2: Moving to 5.5090 mm, started at 5.3751 mm, delta = 0.1339 mm 15-12-21 20:59:01.408 -05 000000040 INF: FPGA: Xmit T2RD\n 15-12-21 20:59:01.413 -05 000000090 INF: FPGA: Xmit T1RD\n 15-12-21 20:59:01.415 -05 000000037 INF: FPGA: Recv T3RD 21298 15-12-21 20:59:01.415 -05 000000045 INF: Tilt Motor 3: Encoder: at motor step 3549 + 4/6 15-12-21 20:59:01.416 -05 000000045 INF: Tilt Motor 3: Moving to 21952 encoder counts 15-12-21 20:59:01.416 -05 000000045 INF: FPGA: Xmit T3MOVETO 21952\n 15-12-21 20:59:01.465 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:01.479 -05 000000093 INF: FPGA: Recv T2RD 21162 15-12-21 20:59:01.479 -05 000000093 INF: FPGA: Recv T1RD 21750 15-12-21 20:59:01.479 -05 000000090 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 20:59:01.479 -05 000000090 INF: Tilt Motor 1: Moving to 21102 encoder counts 15-12-21 20:59:01.479 -05 000000090 INF: FPGA: Xmit T1MOVETO 21102\n 15-12-21 20:59:01.479 -05 000000040 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 20:59:01.479 -05 000000040 INF: Tilt Motor 2: Moving to 21689 encoder counts 15-12-21 20:59:01.481 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 20:59:01.481 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:01.482 -05 000000040 INF: FPGA: Xmit T2MOVETO 21689\n 15-12-21 20:59:01.592 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:01.604 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:01.604 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:01.664 -05 000000024 INF: FPGA: Recv T3MOVETO 108 15-12-21 20:59:01.664 -05 000000045 INF: Tilt Motor 3: To move from 5.410 to 5.576 (0.166 mm) should take 109 steps, but required 108 steps (0.165 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 20:59:01.664 -05 000000045 INF: FPGA: Xmit T3RD\n 15-12-21 20:59:01.743 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:01.745 -05 000000031 INF: FPGA: Recv T3RD 21946 15-12-21 20:59:01.745 -05 000000031 INF: FPGA: Recv T2MOVETO 87 15-12-21 20:59:01.745 -05 000000031 INF: FPGA: Recv T1MOVETO 107 15-12-21 20:59:01.746 -05 000000040 INF: Tilt Motor 2: To move from 5.375 to 5.509 (0.134 mm) should take 88 steps, but required 87 steps (0.133 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 20:59:01.746 -05 000000090 INF: Tilt Motor 1: To move from 5.525 to 5.360 (-0.165 mm) should take 108 steps, but required 107 steps (0.163 mm). Slippage = -0.002 mm (0.01%) 15-12-21 20:59:01.746 -05 000000040 INF: FPGA: Xmit T2RD\n 15-12-21 20:59:01.746 -05 000000045 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 20:59:01.748 -05 000000090 INF: FPGA: Xmit T1RD\n 15-12-21 20:59:01.750 -05 000000045 INF: FPGA: Xmit T3RD\n 15-12-21 20:59:01.824 -05 000000093 INF: FPGA: Recv T2RD 21683 15-12-21 20:59:01.824 -05 000000093 INF: FPGA: Recv T1RD 21108 15-12-21 20:59:01.824 -05 000000093 INF: FPGA: Recv T3RD 21946 15-12-21 20:59:01.824 -05 000000045 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 20:59:01.824 -05 000000045 INF: FPGA: Xmit T3RD\n 15-12-21 20:59:01.824 -05 000000090 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 20:59:01.824 -05 000000040 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 20:59:01.826 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 30.606C:A1\r\n 15-12-21 20:59:01.826 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:01.826 -05 000000090 INF: FPGA: Xmit T1RD\n 15-12-21 20:59:01.827 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 20:59:01.827 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:01.827 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 20:59:01.829 -05 000000040 INF: FPGA: Xmit T2RD\n 15-12-21 20:59:01.883 -05 000000061 INF: FPGA: Recv T3RD 21946 15-12-21 20:59:01.883 -05 000000061 INF: FPGA: Recv T1RD 21108 15-12-21 20:59:01.883 -05 000000061 INF: FPGA: Recv T2RD 21683 15-12-21 20:59:01.883 -05 000000090 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 20:59:01.883 -05 000000045 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 20:59:01.883 -05 000000045 INF: Tilt Motor 3: After move to 5.5758, error = -0.0015, min/max error = -0.0015/0.0009, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 20:59:01.883 -05 000000045 INF: Tilt Motor 3: Moved to 5.5743 after 480.4562 ms 15-12-21 20:59:01.884 -05 000000040 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 20:59:01.884 -05 000000090 INF: FPGA: Xmit T1RD\n 15-12-21 20:59:01.884 -05 000000045 INF: ====================================== 15-12-21 20:59:01.886 -05 000000040 INF: FPGA: Xmit T2RD\n 15-12-21 20:59:01.936 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:01.945 -05 000000060 INF: FPGA: Recv T1RD 21108 15-12-21 20:59:01.945 -05 000000060 INF: FPGA: Recv T2RD 21683 15-12-21 20:59:01.945 -05 000000040 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 20:59:01.945 -05 000000040 INF: Tilt Motor 2: After move to 5.5090, error = -0.0015, min/max error = -0.0015/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 20:59:01.945 -05 000000040 INF: Tilt Motor 2: Moved to 5.5075 after 541.8512 ms 15-12-21 20:59:01.946 -05 000000090 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 20:59:01.946 -05 000000090 INF: Tilt Motor 1: After move to 5.3599, error = 0.0015, min/max error = -0.0015/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 20:59:01.946 -05 000000090 INF: Tilt Motor 1: Moved to 5.3614 after 542.7235 ms 15-12-21 20:59:01.946 -05 000000040 INF: ====================================== 15-12-21 20:59:01.947 -05 000000090 INF: ====================================== 15-12-21 20:59:01.948 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Aligning=================== 15-12-21 20:59:01.950 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Aligning=================== 15-12-21 20:59:01.980 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface=================== 15-12-21 20:59:02.018 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface=================== 15-12-21 20:59:02.093 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 20:59:02.093 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:02.113 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:02.114 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:02.128 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:02.137 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:02.138 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:02.138 -05 000000062 INF: Compensator: Remaining IntoPath 15-12-21 20:59:02.148 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:02.205 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:02.463 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 20:59:02.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 20:59:02.539 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:02.540 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 20:59:02.541 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:02.541 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -107.9 um, section = A_1 15-12-21 20:59:02.599 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 20:59:02.604 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:02.606 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:02.607 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:02.607 -05 000000023 INF: ===================Move X,Y=================== 15-12-21 20:59:02.608 -05 000000060 INF: ===================MoveEmissionFilters=================== 15-12-21 20:59:02.672 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 20:59:02.673 -05 000000045 INF: Z Motor: Entering MoveAbsStepped 15-12-21 20:59:02.673 -05 000000045 INF: Z Motor: Moving to -0.1703 mm, started at -0.1079 mm 15-12-21 20:59:02.673 -05 000000045 INF: FPGA: Xmit ZTRG 0\n 15-12-21 20:59:02.674 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 20:59:02.674 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:02.677 -05 000000023 INF: ===================Move X,Y, Parallel=================== 15-12-21 20:59:02.677 -05 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 20:59:02.678 -05 000000093 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 20:59:02.678 -05 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 20:59:02.678 -05 000000031 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 20:59:02.743 -05 000000037 INF: FPGA: Recv ZTRG 15-12-21 20:59:02.744 -05 000000045 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 20:59:02.744 -05 000000061 INF: ===================Move Y Motor without settling=================== 15-12-21 20:59:02.744 -05 000000055 INF: ===================Move X Motor without settling=================== 15-12-21 20:59:02.745 -05 000000061 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 20:59:02.745 -05 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 20:59:02.745 -05 000000093 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 20:59:02.760 -05 000000055 INF: X Motor: Xmit PR VM\n 15-12-21 20:59:02.761 -05 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 20:59:02.761 -05 000000031 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 20:59:02.837 -05 000000020 INF: FPGA: Recv ZYT 15-12-21 20:59:02.837 -05 000000045 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 20:59:02.837 -05 000000045 INF: FPGA: Xmit ZMV 44635\n 15-12-21 20:59:02.838 -05 000000038 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 20:59:02.838 -05 000000029 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 20:59:02.838 -05 000000061 INF: Y Motor: Xmit 1D6568846\n 15-12-21 20:59:02.838 -05 000000040 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 20:59:02.839 -05 000000092 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 20:59:02.839 -05 000000037 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 20:59:02.839 -05 000000055 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 20:59:02.922 -05 000000055 INF: X Motor: Xmit PR VI\n 15-12-21 20:59:02.922 -05 000000040 INF: ====================================== 15-12-21 20:59:02.922 -05 000000061 INF: Y Motor: Xmit 1G\n 15-12-21 20:59:02.922 -05 000000056 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 20:59:02.922 -05 000000020 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 20:59:02.923 -05 000000020 INF: ====================================== 15-12-21 20:59:02.952 -05 000000024 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 20:59:02.952 -05 000000038 INF: ====================================== 15-12-21 20:59:02.964 -05 000000029 INF: ====================================== 15-12-21 20:59:02.965 -05 000000024 INF: ====================================== 15-12-21 20:59:02.965 -05 000000056 INF: ====================================== 15-12-21 20:59:02.965 -05 000000040 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 20:59:02.965 -05 000000040 INF: FPGA: Recv ZMV 15-12-21 20:59:02.965 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 20:59:02.965 -05 000000045 INF: Z Motor: MoveAndTrigger 'ZMV' command took 127.8596 ms 15-12-21 20:59:02.965 -05 000000045 INF: FPGA: Xmit ZDACR\n 15-12-21 20:59:02.966 -05 000000061 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 20:59:02.966 -05 000000037 INF: Emission Filter 12: Remaining IntoPath 15-12-21 20:59:02.974 -05 000000055 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 20:59:02.974 -05 000000093 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 20:59:02.974 -05 000000055 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 20:59:02.974 -05 000000055 INF: X Motor: Moving to 75.9620 mm @15.000 mm/sec, started at 17.9380 mm 15-12-21 20:59:02.974 -05 000000037 INF: ====================================== 15-12-21 20:59:02.974 -05 000000061 INF: Y Motor: Recv 1G\r\n 15-12-21 20:59:02.977 -05 000000055 INF: X Motor: Xmit MA 6948\n 15-12-21 20:59:02.977 -05 000000092 INF: ====================================== 15-12-21 20:59:02.978 -05 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 20:59:02.978 -05 000000061 INF: Y Motor: Xmit 1D\n 15-12-21 20:59:02.985 -05 000000093 INF: ====================================== 15-12-21 20:59:02.986 -05 000000025 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 20:59:02.996 -05 000000090 INF: ====================================== 15-12-21 20:59:02.996 -05 000000031 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 20:59:03.004 -05 000000025 INF: ====================================== 15-12-21 20:59:03.014 -05 000000031 INF: ====================================== 15-12-21 20:59:03.024 -05 000000040 INF: FPGA: Recv ZDACR 44635 15-12-21 20:59:03.041 -05 000000061 INF: Y Motor: Recv 1D\r\n 15-12-21 20:59:03.041 -05 000000045 INF: Z Motor: MoveAndTrigger took 368.5135 ms w/comms 15-12-21 20:59:03.072 -05 000000045 INF: Z Motor: After move to -0.1703, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 20:59:03.072 -05 000000045 INF: Z Motor: MoveAbsStepped took 399.2812 ms 15-12-21 20:59:03.072 -05 000000060 INF: ====================================== 15-12-21 20:59:03.073 -05 000000055 INF: X Motor: Recv MA 6948\r\n> 15-12-21 20:59:03.073 -05 000000061 INF: Y Motor: Recv *6568846\r\n 15-12-21 20:59:03.073 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:03.093 -05 000000055 INF: X Motor: WaitUntilStopped 63868 15-12-21 20:59:03.118 -05 000000061 INF: Y Motor: WaitUntilStopped 62465 15-12-21 20:59:03.127 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 20:59:03.186 -05 000000031 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:03.213 -05 000000092 INF: ===================Camera Arm TDI=================== 15-12-21 20:59:03.215 -05 000000031 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:03.326 -05 000000031 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 20:59:03.363 -05 000000031 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 20:59:03.368 -05 000000031 INF: FPGA: Xmit ZSEL 3\n 15-12-21 20:59:03.432 -05 000000038 INF: FPGA: Recv ZSEL 15-12-21 20:59:03.447 -05 000000031 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 20:59:03.448 -05 000000031 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:03.496 -05 000000031 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 20:59:03.496 -05 000000031 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 20:59:03.496 -05 000000031 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 20:59:03.553 -05 000000025 INF: FPGA: Recv ZSTEP 15-12-21 20:59:03.554 -05 000000031 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:03.558 -05 000000031 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 20:59:03.563 -05 000000031 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:03.570 -05 000000031 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 20:59:03.570 -05 000000031 INF: Z Motor: Entering ArmAbsStepped 15-12-21 20:59:03.570 -05 000000031 INF: Z Motor: Arming to move to -0.1303 mm 15-12-21 20:59:03.574 -05 000000031 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 20:59:03.625 -05 000000056 INF: FPGA: Recv ZYT 15-12-21 20:59:03.625 -05 000000031 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1203756 enc / 12.038 mm / ) = 7052534 enc / 70.525 mm 15-12-21 20:59:03.626 -05 000000031 INF: FPGA: Xmit ZARM 34149\n 15-12-21 20:59:03.679 -05 000000056 INF: FPGA: Recv ZARM 15-12-21 20:59:03.679 -05 000000031 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 53.1521 ms 15-12-21 20:59:03.679 -05 000000031 INF: Z Motor: ArmAbsStepped took 109.1651 ms 15-12-21 20:59:03.680 -05 000000031 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:03.682 -05 000000031 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:03.685 -05 000000031 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 20:59:03.685 -05 000000031 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:03.696 -05 000000031 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 20:59:03.701 -05 000000031 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:03.704 -05 000000031 INF: ====================================== 15-12-21 20:59:03.792 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:03.866 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 20:59:03.866 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:03.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:03.975 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:03.976 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 20:59:03.976 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:03.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:03.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:04.052 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:04.064 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 20:59:04.109 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:04.152 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 20:59:04.180 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:04.180 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:04.240 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 20:59:04.240 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 20:59:04.241 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 20:59:04.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:04.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:04.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:04.340 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P7680R\r 15-12-21 20:59:04.428 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:04.528 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:04.614 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:04.864 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:04.886 -05 000000092 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 20:59:04.886 -05 000000092 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 20:59:04.886 -05 000000092 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 20:59:04.928 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:05.178 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:05.241 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:05.493 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:05.550 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:05.636 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:05.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:05.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:05.800 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:05.817 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:05.890 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:05.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:05.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:05.998 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:06.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:06.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:06.140 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:06.190 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:06.275 -05 000000092 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 20:59:06.275 -05 000000092 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 20:59:06.275 -05 000000092 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 20:59:06.276 -05 000000092 INF: ====================================== 15-12-21 20:59:06.284 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:06.291 -05 000000045 INF: ====================================== 15-12-21 20:59:06.478 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:06.555 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:06.581 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 20:59:06.600 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:06.646 -05 000000061 INF: Y Motor: Moved to 70.6884 after 3528 ms 15-12-21 20:59:06.647 -05 000000061 INF: ====================================== 15-12-21 20:59:06.655 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 20:59:06.660 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 20:59:06.660 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:06.721 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 20:59:06.721 -05 000000057 INF: Current Position of Pump is: 7680 15-12-21 20:59:06.721 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 20:59:06.821 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 20:59:06.909 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:06.936 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:06.971 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 27.836C:A1\r\n 15-12-21 20:59:06.971 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:07.012 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:07.094 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:07.272 -05 000000022 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205, Registering and Extracting C028 L002 T2206, Registering and Extracting C028 L002 T2207=================== 15-12-21 20:59:07.278 -05 000000087 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205, Registering and Extracting C028 L002 T2206=================== 15-12-21 20:59:07.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:07.344 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:07.349 -05 000000068 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205, Registering and Extracting C028 L002 T2206, Registering and Extracting C028 L002 T2209, Registering and Extracting C028 L002 T2210=================== 15-12-21 20:59:07.349 -05 000000063 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205, Registering and Extracting C028 L002 T2206, Registering and Extracting C028 L002 T2209, Registering and Extracting C028 L002 T2210=================== 15-12-21 20:59:07.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:07.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:07.407 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:07.407 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:07.408 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 20:59:07.472 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:07.476 -05 000000055 INF: X Motor: Xmit PR ER\n 15-12-21 20:59:07.491 -05 000000033 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205, Registering and Extracting C028 L002 T2206, Registering and Extracting C028 L002 T2209=================== 15-12-21 20:59:07.533 -05 000000055 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 20:59:07.533 -05 000000055 INF: X Motor: Moved to 75.9653 after 4440 ms 15-12-21 20:59:07.533 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 20:59:07.533 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:07.534 -05 000000055 INF: ====================================== 15-12-21 20:59:07.539 -05 000000023 INF: ===================Move X,Y=================== 15-12-21 20:59:07.540 -05 000000023 INF: ====================================== 15-12-21 20:59:07.548 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:07.553 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:07.553 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 20:59:07.555 -05 000000081 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205, Registering and Extracting C028 L002 T2206, Registering and Extracting C028 L002 T2209=================== 15-12-21 20:59:07.555 -05 000000028 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205, Registering and Extracting C028 L002 T2206, Registering and Extracting C028 L002 T2209=================== 15-12-21 20:59:07.563 -05 000000074 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205=================== 15-12-21 20:59:07.563 -05 000000054 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2204, Registering and Extracting C028 L002 T2205=================== 15-12-21 20:59:07.565 -05 000000011 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203=================== 15-12-21 20:59:07.565 -05 000000079 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203=================== 15-12-21 20:59:07.644 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:07.646 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 20:59:07.647 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 20:59:07.655 -05 000000009 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212, Registering and Extracting C028 L002 T2213, Registering and Extracting C028 L002 T2214, Registering and Extracting C028 L002 T2215=================== 15-12-21 20:59:07.655 -05 000000048 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212, Registering and Extracting C028 L002 T2213, Registering and Extracting C028 L002 T2214, Registering and Extracting C028 L002 T2215, Registering and Extracting C028 L002 T2216=================== 15-12-21 20:59:07.655 -05 000000088 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212, Registering and Extracting C028 L002 T2213, Registering and Extracting C028 L002 T2214, Registering and Extracting C028 L002 T2215, Registering and Extracting C028 L002 T2216=================== 15-12-21 20:59:07.655 -05 000000051 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212, Registering and Extracting C028 L002 T2213, Registering and Extracting C028 L002 T2214, Registering and Extracting C028 L002 T2215, Registering and Extracting C028 L002 T2216=================== 15-12-21 20:59:07.656 -05 000000027 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212, Registering and Extracting C028 L002 T2213, Registering and Extracting C028 L002 T2214, Registering and Extracting C028 L002 T2215, Registering and Extracting C028 L002 T2216=================== 15-12-21 20:59:07.719 -05 000000092 INF: FPGA: Recv ZFREQCL 15-12-21 20:59:07.720 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 20:59:07.721 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:07.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:07.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:07.721 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 20:59:07.780 -05 000000061 INF: FPGA: Recv TDIYERD 7068847 15-12-21 20:59:07.780 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068847 counts (70.688 mm) 15-12-21 20:59:07.781 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:07.783 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:07.833 -05 000000055 INF: ===================Set YMotor gains for scans=================== 15-12-21 20:59:07.833 -05 000000090 INF: ===================TDI FPGA Arm=================== 15-12-21 20:59:07.834 -05 000000055 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 20:59:07.853 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:07.880 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 20:59:07.880 -05 000000090 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 20:59:07.890 -05 000000055 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 20:59:07.891 -05 000000055 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 20:59:07.891 -05 000000055 INF: ====================================== 15-12-21 20:59:07.917 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 20:59:07.920 -05 000000084 INF: FPGA: Recv TDIYPOS 15-12-21 20:59:07.920 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:07.945 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 20:59:07.948 -05 000000090 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 20:59:07.969 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 20:59:07.969 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:08.003 -05 000000084 INF: FPGA: Recv TDIYARM3 15-12-21 20:59:08.005 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:08.034 -05 000000090 INF: ===================TDI FPGA Arm=================== 15-12-21 20:59:08.040 -05 000000090 INF: ====================================== 15-12-21 20:59:08.050 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:08.055 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:08.056 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:08.058 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:08.063 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:08.113 -05 000000029 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 20:59:08.113 -05 000000061 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 20:59:08.114 -05 000000029 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 20:59:08.114 -05 000000029 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 20:59:08.114 -05 000000029 INF: Excitation Filter 1: Moving -36 steps 15-12-21 20:59:08.114 -05 000000029 INF: FPGA: Xmit EX1MV -36\n 15-12-21 20:59:08.114 -05 000000061 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 20:59:08.114 -05 000000061 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 20:59:08.114 -05 000000061 INF: Excitation Filter 2: Moving -107 steps 15-12-21 20:59:08.117 -05 000000061 INF: FPGA: Xmit EX2MV -107\n 15-12-21 20:59:08.159 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:08.329 -05 000000045 INF: FPGA: Recv EX1MV 15-12-21 20:59:08.330 -05 000000029 INF: Excitation Filter 1: Moved -36 steps in 215.8567 ms 15-12-21 20:59:08.330 -05 000000029 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 216.0519 ms 15-12-21 20:59:08.330 -05 000000029 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 216.1897 ms 15-12-21 20:59:08.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:08.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:08.331 -05 000000029 INF: ====================================== 15-12-21 20:59:08.438 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:08.452 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 20:59:08.452 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:08.512 -05 000000024 INF: FPGA: Recv EX2MV 15-12-21 20:59:08.512 -05 000000061 INF: Excitation Filter 2: Moved -107 steps in 397.6473 ms 15-12-21 20:59:08.512 -05 000000061 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 397.827 ms 15-12-21 20:59:08.512 -05 000000061 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 397.9518 ms 15-12-21 20:59:08.513 -05 000000061 INF: ====================================== 15-12-21 20:59:08.516 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:08.520 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:08.525 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 20:59:08.525 -05 000000090 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 20:59:08.525 -05 000000040 INF: ===================FPGA Z Wait=================== 15-12-21 20:59:08.525 -05 000000084 INF: ===================Move Y Motor without settling=================== 15-12-21 20:59:08.526 -05 000000084 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6884 mm 15-12-21 20:59:08.526 -05 000000084 INF: Y Motor: Xmit 1D407662\n 15-12-21 20:59:08.529 -05 000000084 INF: Y Motor: Xmit 1G\n 15-12-21 20:59:08.532 -05 000000040 INF: FPGA: Xmit ZWAIT\n 15-12-21 20:59:08.533 -05 000000023 INF: ===================Camera TDI, Parallel=================== 15-12-21 20:59:08.543 -05 000000090 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 20:59:08.544 -05 000000090 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 20:59:08.553 -05 000000038 INF: ===================Camera TDI=================== 15-12-21 20:59:08.553 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 20:59:08.592 -05 000000084 INF: Y Motor: Recv 1D407662\r\n 15-12-21 20:59:08.593 -05 000000084 INF: Y Motor: Recv 1G\r\n 15-12-21 20:59:08.594 -05 000000084 INF: Y Motor: Xmit 1D\n 15-12-21 20:59:08.614 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:08.614 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:08.616 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:08.616 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 20:59:08.617 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 20:59:08.661 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:08.661 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°, FC temperature to 60°=================== 15-12-21 20:59:08.688 -05 000000084 INF: Y Motor: Recv 1D\r\n 15-12-21 20:59:08.689 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.985C:A1\r\n 15-12-21 20:59:08.689 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:08.689 -05 000000084 INF: Y Motor: Recv *407662\r\n 15-12-21 20:59:08.690 -05 000000084 INF: Y Motor: WaitUntilStopped 76451 15-12-21 20:59:08.836 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:60.00\r 15-12-21 20:59:08.876 -05 000000092 INF: FPGA: Recv ZWAIT 15-12-21 20:59:08.877 -05 000000040 INF: ====================================== 15-12-21 20:59:08.879 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 20:59:08.879 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:09.012 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:0:1\r 15-12-21 20:59:09.025 -05 000000038 INF: ===================Frame #4=================== 15-12-21 20:59:09.073 -05 000000089 INF: ===================Frame #8=================== 15-12-21 20:59:09.077 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 20:59:09.077 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:09.257 -05 000000038 INF: ===================Frame #22=================== 15-12-21 20:59:09.258 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 20:59:09.259 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 20:59:09.262 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 20:59:09.263 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 20:59:09.309 -05 000000089 INF: ===================Frame #26=================== 15-12-21 20:59:09.309 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:09.335 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:09.379 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 20:59:09.379 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:09.411 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:09.412 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Selecting Reagent CRM (7)=================== 15-12-21 20:59:09.412 -05 000000057 INF: Valve A2: Go to position 7 15-12-21 20:59:09.412 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 20:59:09.486 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 20:59:09.486 -05 000000057 INF: Valve A2: 8.304 seconds since last move, > 5.000 seconds required between moves 15-12-21 20:59:09.486 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 5 to 7 15-12-21 20:59:09.486 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW7\r 15-12-21 20:59:09.487 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 20:59:09.487 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 20:59:09.627 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:09.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:09.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:09.765 -05 000000038 INF: ===================Frame #62=================== 15-12-21 20:59:09.771 -05 000000089 INF: ===================Frame #63=================== 15-12-21 20:59:09.799 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:09.858 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:09.858 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:09.922 -05 000000089 INF: ===================Frame #75=================== 15-12-21 20:59:09.985 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:10.043 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 7\r 15-12-21 20:59:10.043 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:10.043 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 20:59:10.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:10.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:10.072 -05 000000089 INF: ===================Frame #87=================== 15-12-21 20:59:10.113 -05 000000038 INF: ===================Frame #90=================== 15-12-21 20:59:10.145 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:10.168 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 20:59:10.168 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:10.222 -05 000000089 INF: ===================Frame #98=================== 15-12-21 20:59:10.276 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 20:59:10.294 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 20:59:10.294 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:10.327 -05 000000038 INF: ===================Frame #107=================== 15-12-21 20:59:10.401 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:10.418 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 20:59:10.418 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:10.479 -05 000000038 INF: ===================Frame #119=================== 15-12-21 20:59:10.524 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:10.524 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 20:59:10.525 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:10.566 -05 000000089 INF: ===================Frame #126=================== 15-12-21 20:59:10.607 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:10.618 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 20:59:10.630 -05 000000038 INF: ===================Frame #131=================== 15-12-21 20:59:10.707 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 20:59:10.781 -05 000000038 INF: ===================Frame #143=================== 15-12-21 20:59:10.793 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 20:59:10.793 -05 000000057 INF: Current Position of Pump is: 7680 15-12-21 20:59:10.793 -05 000000089 INF: ===================Frame #144=================== 15-12-21 20:59:10.793 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7), Aspirating port PortB=================== 15-12-21 20:59:10.893 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P21120R\r 15-12-21 20:59:10.935 -05 000000038 INF: ===================Frame #155=================== 15-12-21 20:59:10.980 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:10.986 -05 000000089 INF: ===================Frame #159=================== 15-12-21 20:59:11.080 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:11.086 -05 000000038 INF: ===================Frame #167=================== 15-12-21 20:59:11.139 -05 000000089 INF: ===================Frame #171=================== 15-12-21 20:59:11.167 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:11.237 -05 000000038 INF: ===================Frame #179=================== 15-12-21 20:59:11.268 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:11.290 -05 000000089 INF: ===================Frame #183=================== 15-12-21 20:59:11.291 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:11.291 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:11.353 -05 000000063 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212, Registering and Extracting C028 L002 T2213, Registering and Extracting C028 L002 T2214, Registering and Extracting C028 L002 T2215=================== 15-12-21 20:59:11.387 -05 000000038 INF: ===================Frame #191=================== 15-12-21 20:59:11.403 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:11.418 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:11.441 -05 000000089 INF: ===================Frame #195=================== 15-12-21 20:59:11.480 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:11.481 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:11.481 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:11.542 -05 000000038 INF: ===================Frame #203=================== 15-12-21 20:59:11.583 -05 000000068 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212, Registering and Extracting C028 L002 T2213, Registering and Extracting C028 L002 T2214=================== 15-12-21 20:59:11.589 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:11.592 -05 000000089 INF: ===================Frame #207=================== 15-12-21 20:59:11.604 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:11.604 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:11.695 -05 000000038 INF: ===================Frame #215=================== 15-12-21 20:59:11.730 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:11.745 -05 000000089 INF: ===================Frame #219=================== 15-12-21 20:59:11.771 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:11.793 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:11.796 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 20:59:11.796 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:11.846 -05 000000038 INF: ===================Frame #227=================== 15-12-21 20:59:11.895 -05 000000089 INF: ===================Frame #231=================== 15-12-21 20:59:11.998 -05 000000038 INF: ===================Frame #239=================== 15-12-21 20:59:12.007 -05 000000028 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212, Registering and Extracting C028 L002 T2213=================== 15-12-21 20:59:12.043 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:12.047 -05 000000089 INF: ===================Frame #243=================== 15-12-21 20:59:12.079 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:12.079 -05 000000009 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203, Registering and Extracting C028 L002 T2212=================== 15-12-21 20:59:12.103 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:12.104 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 25.333C:A1\r\n 15-12-21 20:59:12.104 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:12.148 -05 000000038 INF: ===================Frame #251=================== 15-12-21 20:59:12.197 -05 000000089 INF: ===================Frame #255=================== 15-12-21 20:59:12.298 -05 000000038 INF: ===================Frame #262=================== 15-12-21 20:59:12.313 -05 000000048 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202, Registering and Extracting C028 L002 T2203=================== 15-12-21 20:59:12.347 -05 000000089 INF: ===================Frame #266=================== 15-12-21 20:59:12.353 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:12.370 -05 000000051 INF: ===================Registering and Extracting C028 L002 T2201, Registering and Extracting C028 L002 T2202=================== 15-12-21 20:59:12.416 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:12.460 -05 000000027 INF: ===================Registering and Extracting C028 L002 T2201=================== 15-12-21 20:59:12.596 -05 000000088 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 20:59:12.614 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 20:59:12.620 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 20:59:12.666 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:12.724 -05 000000089 INF: ===================Frame #296=================== 15-12-21 20:59:12.727 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:12.738 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 20:59:12.746 -05 000000038 INF: ===================Frame #298=================== 15-12-21 20:59:12.748 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 20:59:12.836 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:12.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:12.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:12.871 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 20:59:12.879 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 20:59:12.930 -05 000000089 INF: ===================Frame #312=================== 15-12-21 20:59:12.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:12.959 -05 000000038 INF: ===================Frame #315=================== 15-12-21 20:59:12.977 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:12.980 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:12.980 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:12.981 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 20:59:12.987 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 20:59:13.040 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:13.083 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:13.086 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 20:59:13.107 -05 000000089 INF: ===================Frame #326=================== 15-12-21 20:59:13.109 -05 000000038 INF: ===================Frame #327=================== 15-12-21 20:59:13.164 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:13.164 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:13.259 -05 000000038 INF: ===================Frame #338=================== 15-12-21 20:59:13.285 -05 000000089 INF: ===================Frame #341=================== 15-12-21 20:59:13.293 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:13.352 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:13.435 -05 000000089 INF: ===================Frame #352=================== 15-12-21 20:59:13.492 -05 000000038 INF: ===================Frame #357=================== 15-12-21 20:59:13.602 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:13.639 -05 000000089 INF: ===================Frame #369=================== 15-12-21 20:59:13.642 -05 000000038 INF: ===================Frame #369=================== 15-12-21 20:59:13.662 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:13.790 -05 000000089 INF: ===================Frame #380=================== 15-12-21 20:59:13.792 -05 000000038 INF: ===================Frame #381=================== 15-12-21 20:59:13.838 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:13.912 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:13.917 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 26.995C:A1\r\n 15-12-21 20:59:13.917 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:13.948 -05 000000038 INF: ===================Frame #392=================== 15-12-21 20:59:13.974 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:13.985 -05 000000089 INF: ===================Frame #396=================== 15-12-21 20:59:14.054 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 20:59:14.169 -05 000000089 INF: ===================Frame #410=================== 15-12-21 20:59:14.210 -05 000000038 INF: ===================Frame #414=================== 15-12-21 20:59:14.224 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:14.288 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:14.337 -05 000000089 INF: ===================Frame #424=================== 15-12-21 20:59:14.387 -05 000000038 INF: ===================Frame #428=================== 15-12-21 20:59:14.392 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:14.413 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:14.413 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:14.508 -05 000000089 INF: ===================Frame #437=================== 15-12-21 20:59:14.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:14.538 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:14.539 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:14.539 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:14.556 -05 000000038 INF: ===================Frame #441=================== 15-12-21 20:59:14.600 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:14.644 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:14.658 -05 000000089 INF: ===================Frame #449=================== 15-12-21 20:59:14.662 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:14.662 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:14.706 -05 000000038 INF: ===================Frame #453=================== 15-12-21 20:59:14.808 -05 000000089 INF: ===================Frame #461=================== 15-12-21 20:59:14.850 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:14.856 -05 000000038 INF: ===================Frame #465=================== 15-12-21 20:59:14.911 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:14.959 -05 000000089 INF: ===================Frame #473=================== 15-12-21 20:59:15.006 -05 000000038 INF: ===================Frame #477=================== 15-12-21 20:59:15.110 -05 000000089 INF: ===================Frame #485=================== 15-12-21 20:59:15.156 -05 000000038 INF: ===================Frame #488=================== 15-12-21 20:59:15.161 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:15.224 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:15.260 -05 000000089 INF: ===================Frame #497=================== 15-12-21 20:59:15.378 -05 000000038 INF: ===================Frame #506=================== 15-12-21 20:59:15.411 -05 000000089 INF: ===================Frame #509=================== 15-12-21 20:59:15.474 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:15.536 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:15.550 -05 000000038 INF: ===================Frame #520=================== 15-12-21 20:59:15.561 -05 000000089 INF: ===================Frame #520=================== 15-12-21 20:59:15.719 -05 000000038 INF: ===================Frame #533=================== 15-12-21 20:59:15.786 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:15.824 -05 000000089 INF: ===================Frame #541=================== 15-12-21 20:59:15.846 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:15.871 -05 000000038 INF: ===================Frame #545=================== 15-12-21 20:59:15.888 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:15.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:15.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:15.975 -05 000000089 INF: ===================Frame #553=================== 15-12-21 20:59:16.016 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:16.021 -05 000000038 INF: ===================Frame #557=================== 15-12-21 20:59:16.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:16.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:16.096 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:16.128 -05 000000089 INF: ===================Frame #565=================== 15-12-21 20:59:16.146 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:16.160 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:16.161 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:16.161 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:16.172 -05 000000038 INF: ===================Frame #569=================== 15-12-21 20:59:16.279 -05 000000089 INF: ===================Frame #577=================== 15-12-21 20:59:16.322 -05 000000038 INF: ===================Frame #581=================== 15-12-21 20:59:16.410 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:16.429 -05 000000089 INF: ===================Frame #589=================== 15-12-21 20:59:16.472 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:16.472 -05 000000038 INF: ===================Frame #592=================== 15-12-21 20:59:16.580 -05 000000089 INF: ===================Frame #601=================== 15-12-21 20:59:16.712 -05 000000038 INF: ===================Frame #611=================== 15-12-21 20:59:16.722 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:16.731 -05 000000089 INF: ===================Frame #613=================== 15-12-21 20:59:16.784 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:16.863 -05 000000038 INF: ===================Frame #623=================== 15-12-21 20:59:16.881 -05 000000089 INF: ===================Frame #625=================== 15-12-21 20:59:16.898 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:16.970 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.019C:A1\r\n 15-12-21 20:59:16.970 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:17.013 -05 000000038 INF: ===================Frame #635=================== 15-12-21 20:59:17.031 -05 000000089 INF: ===================Frame #637=================== 15-12-21 20:59:17.034 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:17.095 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:17.163 -05 000000038 INF: ===================Frame #647=================== 15-12-21 20:59:17.181 -05 000000089 INF: ===================Frame #649=================== 15-12-21 20:59:17.210 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:17.316 -05 000000038 INF: ===================Frame #659=================== 15-12-21 20:59:17.332 -05 000000089 INF: ===================Frame #661=================== 15-12-21 20:59:17.345 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:17.408 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:17.466 -05 000000038 INF: ===================Frame #671=================== 15-12-21 20:59:17.482 -05 000000089 INF: ===================Frame #672=================== 15-12-21 20:59:17.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:17.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:17.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:17.618 -05 000000038 INF: ===================Frame #683=================== 15-12-21 20:59:17.658 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:17.699 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:17.720 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:17.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:17.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:17.768 -05 000000038 INF: ===================Frame #695=================== 15-12-21 20:59:17.821 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:17.845 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:17.845 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:17.868 -05 000000089 INF: ===================Frame #703=================== 15-12-21 20:59:17.918 -05 000000038 INF: ===================Frame #707=================== 15-12-21 20:59:17.970 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:18.020 -05 000000089 INF: ===================Frame #715=================== 15-12-21 20:59:18.030 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:18.069 -05 000000038 INF: ===================Frame #719=================== 15-12-21 20:59:18.171 -05 000000089 INF: ===================Frame #727=================== 15-12-21 20:59:18.219 -05 000000038 INF: ===================Frame #731=================== 15-12-21 20:59:18.280 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:18.321 -05 000000089 INF: ===================Frame #739=================== 15-12-21 20:59:18.344 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:18.344 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 20:59:18.370 -05 000000038 INF: ===================Frame #743=================== 15-12-21 20:59:18.444 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 20:59:18.472 -05 000000089 INF: ===================Frame #751=================== 15-12-21 20:59:18.522 -05 000000038 INF: ===================Frame #755=================== 15-12-21 20:59:18.531 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 20:59:18.531 -05 000000057 INF: Current Position of Pump is: 28800 15-12-21 20:59:18.531 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 20:59:18.623 -05 000000089 INF: ===================Frame #763=================== 15-12-21 20:59:18.631 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 20:59:18.673 -05 000000038 INF: ===================Frame #766=================== 15-12-21 20:59:18.717 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:18.774 -05 000000089 INF: ===================Frame #774=================== 15-12-21 20:59:18.817 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:18.906 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:19.072 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:19.093 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 34.651C:A1\r\n 15-12-21 20:59:19.093 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:19.128 -05 000000038 INF: ===================Frame #802=================== 15-12-21 20:59:19.133 -05 000000089 INF: ===================Frame #803=================== 15-12-21 20:59:19.156 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:19.195 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:19.216 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:19.216 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:19.217 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:19.217 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:19.217 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 20:59:19.283 -05 000000089 INF: ===================Frame #815=================== 15-12-21 20:59:19.318 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:19.325 -05 000000038 INF: ===================Frame #818=================== 15-12-21 20:59:19.341 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 20:59:19.341 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:19.434 -05 000000089 INF: ===================Frame #827=================== 15-12-21 20:59:19.444 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:19.468 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:19.468 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:19.499 -05 000000038 INF: ===================Frame #832=================== 15-12-21 20:59:19.570 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 20:59:19.584 -05 000000089 INF: ===================Frame #839=================== 15-12-21 20:59:19.592 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 20:59:19.592 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:19.667 -05 000000038 INF: ===================Frame #845=================== 15-12-21 20:59:19.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:19.716 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:19.716 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:19.735 -05 000000089 INF: ===================Frame #850=================== 15-12-21 20:59:19.819 -05 000000038 INF: ===================Frame #857=================== 15-12-21 20:59:19.824 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:19.840 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 20:59:19.840 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:19.948 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:19.949 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:19.950 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:19.950 -05 000000057 INF: WaitCommand(5000) start 15-12-21 20:59:19.950 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 20:59:19.969 -05 000000038 INF: ===================Frame #869=================== 15-12-21 20:59:19.985 -05 000000089 INF: ===================Frame #870=================== 15-12-21 20:59:20.120 -05 000000038 INF: ===================Frame #881=================== 15-12-21 20:59:20.163 -05 000000089 INF: ===================Frame #884=================== 15-12-21 20:59:20.271 -05 000000038 INF: ===================Frame #893=================== 15-12-21 20:59:20.342 -05 000000089 INF: ===================Frame #898=================== 15-12-21 20:59:20.421 -05 000000038 INF: ===================Frame #905=================== 15-12-21 20:59:20.510 -05 000000089 INF: ===================Frame #912=================== 15-12-21 20:59:20.571 -05 000000038 INF: ===================Frame #917=================== 15-12-21 20:59:20.686 -05 000000089 INF: ===================Frame #926=================== 15-12-21 20:59:20.721 -05 000000038 INF: ===================Frame #928=================== 15-12-21 20:59:20.859 -05 000000089 INF: ===================Frame #939=================== 15-12-21 20:59:20.950 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:20.951 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 20:59:20.989 -05 000000038 INF: ===================Frame #950=================== 15-12-21 20:59:21.011 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:21.011 -05 000000089 INF: ===================Frame #951=================== 15-12-21 20:59:21.028 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:21.028 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:21.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:21.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:21.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:21.162 -05 000000089 INF: ===================Frame #963=================== 15-12-21 20:59:21.170 -05 000000038 INF: ===================Frame #964=================== 15-12-21 20:59:21.253 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:21.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:21.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:21.312 -05 000000089 INF: ===================Frame #975=================== 15-12-21 20:59:21.341 -05 000000038 INF: ===================Frame #977=================== 15-12-21 20:59:21.465 -05 000000089 INF: ===================Frame #987=================== 15-12-21 20:59:21.492 -05 000000038 INF: ===================Frame #989=================== 15-12-21 20:59:21.615 -05 000000089 INF: ===================Frame #999=================== 15-12-21 20:59:21.642 -05 000000038 INF: ===================Frame #1001=================== 15-12-21 20:59:21.765 -05 000000089 INF: ===================Frame #1011=================== 15-12-21 20:59:21.792 -05 000000038 INF: ===================Frame #1013=================== 15-12-21 20:59:21.915 -05 000000089 INF: ===================Frame #1023=================== 15-12-21 20:59:21.942 -05 000000038 INF: ===================Frame #1025=================== 15-12-21 20:59:21.952 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:21.952 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 20:59:22.066 -05 000000089 INF: ===================Frame #1035=================== 15-12-21 20:59:22.079 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:22.093 -05 000000038 INF: ===================Frame #1037=================== 15-12-21 20:59:22.151 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.017C:A1\r\n 15-12-21 20:59:22.151 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:22.216 -05 000000089 INF: ===================Frame #1047=================== 15-12-21 20:59:22.243 -05 000000038 INF: ===================Frame #1049=================== 15-12-21 20:59:22.367 -05 000000089 INF: ===================Frame #1058=================== 15-12-21 20:59:22.395 -05 000000038 INF: ===================Frame #1061=================== 15-12-21 20:59:22.510 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:22.531 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.734C:A1\r\n 15-12-21 20:59:22.531 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:22.545 -05 000000038 INF: ===================Frame #1073=================== 15-12-21 20:59:22.637 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:22.697 -05 000000038 INF: ===================Frame #1085=================== 15-12-21 20:59:22.713 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:22.713 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:22.736 -05 000000089 INF: ===================Frame #1088=================== 15-12-21 20:59:22.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:22.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:22.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:22.847 -05 000000038 INF: ===================Frame #1096=================== 15-12-21 20:59:22.922 -05 000000089 INF: ===================Frame #1102=================== 15-12-21 20:59:22.941 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:22.952 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:22.952 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 20:59:22.961 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:22.961 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:23.102 -05 000000089 INF: ===================Frame #1117=================== 15-12-21 20:59:23.178 -05 000000038 INF: ===================Frame #1123=================== 15-12-21 20:59:23.252 -05 000000089 INF: ===================Frame #1128=================== 15-12-21 20:59:23.329 -05 000000038 INF: ===================Frame #1135=================== 15-12-21 20:59:23.436 -05 000000089 INF: ===================Frame #1143=================== 15-12-21 20:59:23.479 -05 000000038 INF: ===================Frame #1146=================== 15-12-21 20:59:23.589 -05 000000089 INF: ===================Frame #1155=================== 15-12-21 20:59:23.684 -05 000000038 INF: ===================Frame #1163=================== 15-12-21 20:59:23.740 -05 000000089 INF: ===================Frame #1167=================== 15-12-21 20:59:23.836 -05 000000038 INF: ===================Frame #1175=================== 15-12-21 20:59:23.891 -05 000000089 INF: ===================Frame #1179=================== 15-12-21 20:59:23.952 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:23.952 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 20:59:23.986 -05 000000038 INF: ===================Frame #1186=================== 15-12-21 20:59:24.041 -05 000000089 INF: ===================Frame #1191=================== 15-12-21 20:59:24.178 -05 000000038 INF: ===================Frame #1202=================== 15-12-21 20:59:24.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:24.191 -05 000000089 INF: ===================Frame #1203=================== 15-12-21 20:59:24.210 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:24.210 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:24.310 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:24.334 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 41.401C:A1\r\n 15-12-21 20:59:24.334 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:24.341 -05 000000089 INF: ===================Frame #1215=================== 15-12-21 20:59:24.346 -05 000000038 INF: ===================Frame #1215=================== 15-12-21 20:59:24.439 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:24.492 -05 000000089 INF: ===================Frame #1227=================== 15-12-21 20:59:24.496 -05 000000038 INF: ===================Frame #1227=================== 15-12-21 20:59:24.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:24.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:24.625 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:24.642 -05 000000089 INF: ===================Frame #1238=================== 15-12-21 20:59:24.646 -05 000000038 INF: ===================Frame #1239=================== 15-12-21 20:59:24.648 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:24.648 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:24.796 -05 000000038 INF: ===================Frame #1250=================== 15-12-21 20:59:24.832 -05 000000056 INF: FPGA: Recv TDIYWAIT 15-12-21 20:59:24.833 -05 000000090 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 20:59:24.835 -05 000000090 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 20:59:24.839 -05 000000086 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 20:59:24.839 -05 000000061 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 20:59:24.839 -05 000000086 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 20:59:24.842 -05 000000086 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 20:59:24.842 -05 000000086 INF: Excitation Filter 1: Moving 36 steps 15-12-21 20:59:24.842 -05 000000061 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 20:59:24.842 -05 000000086 INF: FPGA: Xmit EX1MV 36\n 15-12-21 20:59:24.842 -05 000000061 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 20:59:24.842 -05 000000061 INF: Excitation Filter 2: Moving 107 steps 15-12-21 20:59:24.847 -05 000000061 INF: FPGA: Xmit EX2MV 107\n 15-12-21 20:59:24.874 -05 000000038 INF: Camera complete - got 1250 frames. 15-12-21 20:59:24.875 -05 000000038 INF: ===================CameraTDI Cleanup=================== 15-12-21 20:59:24.953 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:24.953 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:24.954 -05 000000057 INF: WaitCommand(5000) end 15-12-21 20:59:24.954 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:24.957 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:24.961 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:24.966 -05 000000025 INF: ===================WaitCommand=================== 15-12-21 20:59:24.967 -05 000000092 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 20:59:24.967 -05 000000025 INF: WaitCommand(15000) start 15-12-21 20:59:24.967 -05 000000025 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 20:59:24.967 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:25.019 -05 000000056 INF: FPGA: Recv EX1MV 15-12-21 20:59:25.019 -05 000000086 INF: Excitation Filter 1: Moved 36 steps in 176.796 ms 15-12-21 20:59:25.019 -05 000000086 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 179.6669 ms 15-12-21 20:59:25.019 -05 000000086 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 179.7425 ms 15-12-21 20:59:25.020 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:25.020 -05 000000086 INF: ====================================== 15-12-21 20:59:25.027 -05 000000089 INF: ===================Frame #1250=================== 15-12-21 20:59:25.027 -05 000000038 INF: ===================Camera TDI=================== 15-12-21 20:59:25.060 -05 000000089 INF: Camera complete - got 1250 frames. 15-12-21 20:59:25.062 -05 000000089 INF: ===================CameraTDI Cleanup=================== 15-12-21 20:59:25.065 -05 000000038 INF: ====================================== 15-12-21 20:59:25.120 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:25.208 -05 000000038 INF: FPGA: Recv EX2MV 15-12-21 20:59:25.208 -05 000000061 INF: Excitation Filter 2: Moved 107 steps in 365.74 ms 15-12-21 20:59:25.208 -05 000000061 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 365.9273 ms 15-12-21 20:59:25.208 -05 000000061 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 366.0712 ms 15-12-21 20:59:25.209 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:25.209 -05 000000061 INF: ====================================== 15-12-21 20:59:25.211 -05 000000090 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 20:59:25.215 -05 000000090 INF: ====================================== 15-12-21 20:59:25.244 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 20:59:25.272 -05 000000089 INF: ====================================== 15-12-21 20:59:25.277 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 20:59:25.279 -05 000000023 INF: ====================================== 15-12-21 20:59:25.309 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 20:59:25.395 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 20:59:25.395 -05 000000092 INF: Current Position of Pump is: 28800 15-12-21 20:59:25.395 -05 000000092 INF: Dispense Steps 48000 is greater than steps to home syringe 28800, reducing number of steps to 28800 15-12-21 20:59:25.395 -05 000000092 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 20:59:25.495 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD28800R\r 15-12-21 20:59:25.521 -05 000000084 INF: Y Motor: Moved to 9.0764 after 16829 ms 15-12-21 20:59:25.522 -05 000000084 INF: ====================================== 15-12-21 20:59:25.524 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:25.530 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:25.534 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:25.535 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 20:59:25.580 -05 000000056 INF: FPGA: Recv TDICLINES 10155 15-12-21 20:59:25.580 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 20:59:25.581 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:25.642 -05 000000061 INF: FPGA: Recv TDIYERD 907644 15-12-21 20:59:25.642 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 20:59:25.681 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:25.707 -05 000000045 INF: FPGA: Recv ZADCR 38255 15-12-21 20:59:25.707 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.146. Y moved -60.304 mm 15-12-21 20:59:25.707 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 20:59:25.708 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:25.769 -05 000000056 INF: FPGA: Recv TDIPULSES 160001 15-12-21 20:59:25.769 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 20:59:25.769 -05 000000062 INF: TDIScan finished after 23304.5229 ms 15-12-21 20:59:25.769 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.370 mm (error = -0.010 mm) 15-12-21 20:59:25.769 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.370 mm (error = -0.010 mm) 15-12-21 20:59:25.771 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:25.801 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.043 um 15-12-21 20:59:25.807 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:25.864 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:25.875 -05 000000038 INF: ===================Dither Clean Up Command=================== 15-12-21 20:59:25.876 -05 000000055 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 20:59:25.879 -05 000000056 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 20:59:25.883 -05 000000055 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 20:59:25.887 -05 000000084 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 20:59:25.887 -05 000000084 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 20:59:25.887 -05 000000084 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 20:59:25.889 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 20:59:25.890 -05 000000045 INF: ===================LFT:Extracting coords=================== 15-12-21 20:59:25.891 -05 000000086 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 20:59:25.891 -05 000000086 INF: FPGA: Xmit ZSEL 0\n 15-12-21 20:59:25.953 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 20:59:25.955 -05 000000045 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 20:59:25.956 -05 000000061 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:25.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:25.956 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:25.956 -05 000000089 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:25.957 -05 000000061 INF: ===================Lookup Focus Tracking=================== 15-12-21 20:59:25.957 -05 000000023 INF: ===================Lookup Focus Tracking=================== 15-12-21 20:59:25.957 -05 000000089 INF: ===================Lookup Focus Tracking=================== 15-12-21 20:59:25.958 -05 000000090 INF: FPGA: Recv ZSTEP 15-12-21 20:59:25.958 -05 000000090 INF: FPGA: Recv ZSEL 15-12-21 20:59:25.958 -05 000000055 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 20:59:25.958 -05 000000086 INF: FPGA: Xmit ZDACW 44635\n 15-12-21 20:59:25.958 -05 000000084 INF: ====================================== 15-12-21 20:59:25.958 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:25.958 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:25.959 -05 000000055 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 20:59:25.959 -05 000000056 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 20:59:25.959 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 20:59:25.959 -05 000000055 INF: ====================================== 15-12-21 20:59:25.967 -05 000000025 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 20:59:26.076 -05 000000084 INF: FPGA: Recv ZDACW 15-12-21 20:59:26.077 -05 000000056 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 20:59:26.077 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:26.077 -05 000000086 INF: ====================================== 15-12-21 20:59:26.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:26.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:26.078 -05 000000056 INF: ====================================== 15-12-21 20:59:26.186 -05 000000061 INF: LFT found best fwhm score 2.587932 in 183 ms 15-12-21 20:59:26.196 -05 000000078 INF: LFT found best fwhm score 2.579305 in 191 ms 15-12-21 20:59:26.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:26.201 -05 000000078 INF: LFT found good score at index 6865 with fwhm value 2.579305. Next cycle, cycle 26 starting Z position for top surface is at -0.175 mm FC:B, C:25,L:1,T 15-12-21 20:59:26.202 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:26.210 -05 000000089 INF: LFT found best fwhm score 2.689147 in 204 ms 15-12-21 20:59:26.210 -05 000000089 INF: LFT found good score at index 4013 with fwhm value 2.689147. Next cycle, cycle 26 starting Z position for top surface is at -0.175 mm FC:B, C:25,L:1,T 15-12-21 20:59:26.210 -05 000000089 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:26.219 -05 000000078 INF: ====================================== 15-12-21 20:59:26.219 -05 000000089 INF: ====================================== 15-12-21 20:59:26.222 -05 000000023 INF: LFT found best fwhm score 2.332346 in 220 ms 15-12-21 20:59:26.228 -05 000000023 INF: LFT found good score at index 4629 with fwhm value 2.332346. Next cycle, cycle 26 starting Z position for top surface is at -0.175 mm FC:B, C:25,L:1,T 15-12-21 20:59:26.228 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:26.236 -05 000000023 INF: ====================================== 15-12-21 20:59:26.245 -05 000000061 INF: LFT found good score at index 7125 with fwhm value 2.587932. Next cycle, cycle 26 starting Z position for top surface is at -0.175 mm FC:B, C:25,L:1,T 15-12-21 20:59:26.245 -05 000000061 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:26.254 -05 000000061 INF: ====================================== 15-12-21 20:59:26.256 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:26.256 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:26.258 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 20:59:26.266 -05 000000045 INF: LFT weighted average best Z for top surface is at -0.175mm FC:B, C:25,L:1,T 15-12-21 20:59:26.275 -05 000000045 INF: ====================================== 15-12-21 20:59:26.276 -05 000000038 INF: ====================================== 15-12-21 20:59:26.296 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:26.327 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:26.328 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 20:59:26.328 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:26.328 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 20:59:26.355 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:26.364 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 20:59:26.364 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:26.364 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 20:59:26.364 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:26.364 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 20:59:26.372 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 20:59:26.391 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:26.401 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:26.409 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Waiting for image analysis, Dispensing port PortC, Delay 14 of 15 seconds left=================== 15-12-21 20:59:26.409 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Dispensing port PortC, Delay 14 of 15 seconds left=================== 15-12-21 20:59:26.409 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Waiting for image analysis=================== 15-12-21 20:59:26.410 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 20:59:26.423 -05 000000062 INF: Waited 50 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 29, buffer wait time 0 15-12-21 20:59:26.437 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:26.438 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 20:59:26.438 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 20:59:26.438 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 20:59:26.451 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 20:59:26.461 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:26.461 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:26.480 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:26.481 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 20:59:26.481 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:26.481 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -170.3 um, section = A_1 15-12-21 20:59:26.484 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:26.485 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:26.487 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 20:59:26.487 -05 000000084 INF: ===================MoveEmissionFilters=================== 15-12-21 20:59:26.487 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:26.488 -05 000000055 INF: ===================Move X,Y, Parallel=================== 15-12-21 20:59:26.497 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 20:59:26.497 -05 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 20:59:26.497 -05 000000061 INF: Z Motor: Entering MoveAbsStepped 15-12-21 20:59:26.497 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 20:59:26.497 -05 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 20:59:26.498 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:26.498 -05 000000029 INF: ===================Move Y Motor without settling=================== 15-12-21 20:59:26.498 -05 000000045 INF: ===================Move X Motor without settling=================== 15-12-21 20:59:26.498 -05 000000029 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 20:59:26.498 -05 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 20:59:26.498 -05 000000029 INF: Y Motor: Xmit 1D6568846\n 15-12-21 20:59:26.499 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 20:59:26.499 -05 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 20:59:26.499 -05 000000045 INF: X Motor: Xmit PR VM\n 15-12-21 20:59:26.499 -05 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 20:59:26.500 -05 000000029 INF: Y Motor: Xmit 1G\n 15-12-21 20:59:26.500 -05 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 20:59:26.500 -05 000000056 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 20:59:26.500 -05 000000086 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 20:59:26.501 -05 000000086 INF: Emission Filter 12: Remaining IntoPath 15-12-21 20:59:26.501 -05 000000089 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 20:59:26.501 -05 000000086 INF: ====================================== 15-12-21 20:59:26.502 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 20:59:26.502 -05 000000089 INF: ====================================== 15-12-21 20:59:26.503 -05 000000056 INF: ====================================== 15-12-21 20:59:26.504 -05 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 20:59:26.504 -05 000000089 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 20:59:26.505 -05 000000089 INF: ====================================== 15-12-21 20:59:26.512 -05 000000090 INF: ====================================== 15-12-21 20:59:26.512 -05 000000056 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 20:59:26.513 -05 000000086 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 20:59:26.513 -05 000000086 INF: ====================================== 15-12-21 20:59:26.514 -05 000000056 INF: ====================================== 15-12-21 20:59:26.514 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:26.515 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:26.516 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 20:59:26.516 -05 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 20:59:26.516 -05 000000090 INF: ====================================== 15-12-21 20:59:26.517 -05 000000056 INF: ===================Camera Arm TDI=================== 15-12-21 20:59:26.517 -05 000000023 INF: ====================================== 15-12-21 20:59:26.517 -05 000000086 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 20:59:26.518 -05 000000086 INF: ====================================== 15-12-21 20:59:26.518 -05 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 20:59:26.518 -05 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 20:59:26.519 -05 000000029 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 20:59:26.519 -05 000000089 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 20:59:26.519 -05 000000089 INF: FPGA: Xmit ZSEL 3\n 15-12-21 20:59:26.520 -05 000000038 INF: ====================================== 15-12-21 20:59:26.525 -05 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 20:59:26.526 -05 000000078 INF: ====================================== 15-12-21 20:59:26.527 -05 000000084 INF: ====================================== 15-12-21 20:59:26.631 -05 000000078 INF: FPGA: Recv ZSEL 15-12-21 20:59:26.632 -05 000000029 INF: Y Motor: Recv 1G\r\n 15-12-21 20:59:26.633 -05 000000045 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 20:59:26.633 -05 000000045 INF: X Motor: Xmit PR VI\n 15-12-21 20:59:26.633 -05 000000029 INF: Y Motor: Xmit 1D\n 15-12-21 20:59:26.634 -05 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 20:59:26.634 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:26.641 -05 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 20:59:26.641 -05 000000089 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 20:59:26.641 -05 000000089 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 20:59:26.653 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:26.689 -05 000000023 INF: FPGA: Recv ZSTEP 15-12-21 20:59:26.690 -05 000000029 INF: Y Motor: Recv 1D\r\n 15-12-21 20:59:26.690 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:26.690 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:26.691 -05 000000045 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 20:59:26.691 -05 000000045 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 20:59:26.691 -05 000000045 INF: X Motor: Moving to 76.7340 mm @15.000 mm/sec, started at 75.9653 mm 15-12-21 20:59:26.691 -05 000000045 INF: X Motor: Xmit MA 7264\n 15-12-21 20:59:26.691 -05 000000029 INF: Y Motor: Recv *6568846\r\n 15-12-21 20:59:26.692 -05 000000029 INF: Y Motor: WaitUntilStopped 62465 15-12-21 20:59:26.701 -05 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 20:59:26.702 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:26.707 -05 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 20:59:26.708 -05 000000089 INF: Z Motor: Entering ArmAbsStepped 15-12-21 20:59:26.708 -05 000000089 INF: Z Motor: Arming to move to -0.1303 mm 15-12-21 20:59:26.708 -05 000000089 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 20:59:26.712 -05 000000044 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104=================== 15-12-21 20:59:26.713 -05 000000034 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105=================== 15-12-21 20:59:26.713 -05 000000072 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105=================== 15-12-21 20:59:26.713 -05 000000031 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106=================== 15-12-21 20:59:26.713 -05 000000088 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1107=================== 15-12-21 20:59:26.714 -05 000000027 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1107, Registering and Extracting C025 L001 T1108=================== 15-12-21 20:59:26.714 -05 000000082 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104=================== 15-12-21 20:59:26.714 -05 000000020 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104=================== 15-12-21 20:59:26.759 -05 000000078 INF: FPGA: Recv ZYT 15-12-21 20:59:26.759 -05 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907641 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 20:59:26.759 -05 000000089 INF: FPGA: Xmit ZARM 34149\n 15-12-21 20:59:26.762 -05 000000045 INF: X Motor: Recv MA 7264\r\n> 15-12-21 20:59:26.762 -05 000000045 INF: X Motor: WaitUntilStopped 60051 15-12-21 20:59:26.814 -05 000000038 INF: FPGA: Recv ZARM 15-12-21 20:59:26.814 -05 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 54.9604 ms 15-12-21 20:59:26.814 -05 000000089 INF: Z Motor: ArmAbsStepped took 105.8139 ms 15-12-21 20:59:26.815 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:26.818 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:26.821 -05 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 20:59:26.822 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:26.827 -05 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 20:59:26.827 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:26.829 -05 000000089 INF: ====================================== 15-12-21 20:59:26.960 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:26.968 -05 000000025 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 20:59:27.066 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:27.258 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:27.262 -05 000000045 INF: X Motor: Xmit PR ER\n 15-12-21 20:59:27.313 -05 000000045 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 20:59:27.313 -05 000000045 INF: X Motor: Moved to 76.7344 after 550 ms 15-12-21 20:59:27.313 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.017C:A1\r\n 15-12-21 20:59:27.313 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:27.315 -05 000000045 INF: ====================================== 15-12-21 20:59:27.316 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:27.385 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:27.655 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:27.657 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:27.718 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:27.954 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:28.017 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:28.018 -05 000000025 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 20:59:28.021 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:28.021 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:28.086 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:28.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:28.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:28.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:28.336 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:28.359 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:28.403 -05 000000056 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 20:59:28.404 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:28.404 -05 000000056 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 20:59:28.404 -05 000000056 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 20:59:28.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:28.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:28.654 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:28.734 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:28.984 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:29.054 -05 000000025 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 20:59:29.055 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:29.305 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:29.395 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:29.439 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:29.452 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 47.380C:A1\r\n 15-12-21 20:59:29.452 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:29.645 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:29.724 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:29.725 -05 000000092 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 20:59:29.725 -05 000000092 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 20:59:29.777 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:29.824 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 20:59:29.842 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:29.842 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:29.945 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:30.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:30.045 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:30.055 -05 000000025 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 20:59:30.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:30.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:30.100 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:30.142 -05 000000056 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 20:59:30.143 -05 000000056 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 20:59:30.143 -05 000000056 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 20:59:30.145 -05 000000056 INF: ====================================== 15-12-21 20:59:30.147 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:30.149 -05 000000061 INF: ====================================== 15-12-21 20:59:30.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:30.247 -05 000000029 INF: Y Motor: Moved to 70.6885 after 3555 ms 15-12-21 20:59:30.248 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:30.248 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:30.249 -05 000000029 INF: ====================================== 15-12-21 20:59:30.252 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 20:59:30.255 -05 000000055 INF: ====================================== 15-12-21 20:59:30.260 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:30.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:30.262 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 20:59:30.308 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 20:59:30.309 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 20:59:30.352 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:30.402 -05 000000089 INF: FPGA: Recv ZFREQCL 15-12-21 20:59:30.404 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 20:59:30.404 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:30.404 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 20:59:30.464 -05 000000090 INF: FPGA: Recv TDIYERD 7068851 15-12-21 20:59:30.464 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068851 counts (70.689 mm) 15-12-21 20:59:30.465 -05 000000092 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:30.466 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:30.466 -05 000000092 INF: ====================================== 15-12-21 20:59:30.467 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:30.472 -05 000000092 INF: ===================TDI FPGA Arm=================== 15-12-21 20:59:30.476 -05 000000078 INF: ===================Set YMotor gains for scans=================== 15-12-21 20:59:30.476 -05 000000078 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 20:59:30.477 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:30.485 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 20:59:30.489 -05 000000092 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 20:59:30.526 -05 000000089 INF: FPGA: Recv TDIYPOS 15-12-21 20:59:30.527 -05 000000078 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 20:59:30.527 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:30.528 -05 000000078 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 20:59:30.528 -05 000000078 INF: ====================================== 15-12-21 20:59:30.544 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 20:59:30.547 -05 000000092 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 20:59:30.589 -05 000000045 INF: FPGA: Recv TDIYARM3 15-12-21 20:59:30.590 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:30.593 -05 000000092 INF: ===================TDI FPGA Arm=================== 15-12-21 20:59:30.602 -05 000000092 INF: ====================================== 15-12-21 20:59:30.604 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:30.606 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:30.606 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:30.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:30.608 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:30.614 -05 000000037 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 20:59:30.615 -05 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 20:59:30.615 -05 000000037 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 20:59:30.615 -05 000000037 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 20:59:30.615 -05 000000037 INF: Excitation Filter 2: Moving -107 steps 15-12-21 20:59:30.618 -05 000000037 INF: FPGA: Xmit EX2MV -107\n 15-12-21 20:59:30.619 -05 000000090 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 20:59:30.619 -05 000000090 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 20:59:30.619 -05 000000090 INF: Excitation Filter 1: Moving -36 steps 15-12-21 20:59:30.623 -05 000000090 INF: FPGA: Xmit EX1MV -36\n 15-12-21 20:59:30.777 -05 000000055 INF: FPGA: Recv EX1MV 15-12-21 20:59:30.778 -05 000000090 INF: Excitation Filter 1: Moved -36 steps in 159.0192 ms 15-12-21 20:59:30.778 -05 000000090 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 159.1922 ms 15-12-21 20:59:30.778 -05 000000090 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 159.3542 ms 15-12-21 20:59:30.779 -05 000000090 INF: ====================================== 15-12-21 20:59:31.025 -05 000000090 INF: FPGA: Recv EX2MV 15-12-21 20:59:31.025 -05 000000037 INF: Excitation Filter 2: Moved -107 steps in 410.4192 ms 15-12-21 20:59:31.025 -05 000000037 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 410.5428 ms 15-12-21 20:59:31.025 -05 000000037 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 410.6349 ms 15-12-21 20:59:31.026 -05 000000037 INF: ====================================== 15-12-21 20:59:31.032 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:31.034 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:31.042 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 20:59:31.042 -05 000000045 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 20:59:31.043 -05 000000056 INF: ===================FPGA Z Wait=================== 15-12-21 20:59:31.048 -05 000000056 INF: FPGA: Xmit ZWAIT\n 15-12-21 20:59:31.048 -05 000000092 INF: ===================Move Y Motor without settling=================== 15-12-21 20:59:31.048 -05 000000092 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 20:59:31.048 -05 000000092 INF: Y Motor: Xmit 1D407662\n 15-12-21 20:59:31.048 -05 000000045 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 20:59:31.049 -05 000000084 INF: ===================Camera TDI, Parallel=================== 15-12-21 20:59:31.049 -05 000000045 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 20:59:31.049 -05 000000092 INF: Y Motor: Xmit 1G\n 15-12-21 20:59:31.055 -05 000000038 INF: ===================Camera TDI=================== 15-12-21 20:59:31.058 -05 000000025 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 20:59:31.058 -05 000000061 INF: ===================Camera TDI=================== 15-12-21 20:59:31.088 -05 000000092 INF: Y Motor: Recv 1D407662\r\n 15-12-21 20:59:31.089 -05 000000092 INF: Y Motor: Recv 1G\r\n 15-12-21 20:59:31.090 -05 000000092 INF: Y Motor: Xmit 1D\n 15-12-21 20:59:31.150 -05 000000092 INF: Y Motor: Recv 1D\r\n 15-12-21 20:59:31.151 -05 000000092 INF: Y Motor: Recv *407662\r\n 15-12-21 20:59:31.152 -05 000000092 INF: Y Motor: WaitUntilStopped 76451 15-12-21 20:59:31.398 -05 000000090 INF: FPGA: Recv ZWAIT 15-12-21 20:59:31.399 -05 000000056 INF: ====================================== 15-12-21 20:59:31.514 -05 000000038 INF: ===================Frame #1=================== 15-12-21 20:59:31.515 -05 000000061 INF: ===================Frame #1=================== 15-12-21 20:59:31.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:31.589 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:31.589 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:31.666 -05 000000038 INF: ===================Frame #13=================== 15-12-21 20:59:31.666 -05 000000061 INF: ===================Frame #13=================== 15-12-21 20:59:31.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:31.776 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:31.776 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:31.816 -05 000000061 INF: ===================Frame #25=================== 15-12-21 20:59:31.817 -05 000000038 INF: ===================Frame #25=================== 15-12-21 20:59:31.919 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:31.983 -05 000000061 INF: ===================Frame #37=================== 15-12-21 20:59:31.984 -05 000000038 INF: ===================Frame #37=================== 15-12-21 20:59:31.985 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:31.985 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:32.059 -05 000000025 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 20:59:32.172 -05 000000061 INF: ===================Frame #53=================== 15-12-21 20:59:32.172 -05 000000038 INF: ===================Frame #53=================== 15-12-21 20:59:32.263 -05 000000044 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1107=================== 15-12-21 20:59:32.267 -05 000000051 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1107, Registering and Extracting C025 L001 T1109=================== 15-12-21 20:59:32.323 -05 000000038 INF: ===================Frame #65=================== 15-12-21 20:59:32.323 -05 000000061 INF: ===================Frame #65=================== 15-12-21 20:59:32.463 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:32.473 -05 000000038 INF: ===================Frame #77=================== 15-12-21 20:59:32.474 -05 000000061 INF: ===================Frame #77=================== 15-12-21 20:59:32.480 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.015C:A1\r\n 15-12-21 20:59:32.480 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:32.626 -05 000000061 INF: ===================Frame #89=================== 15-12-21 20:59:32.626 -05 000000038 INF: ===================Frame #89=================== 15-12-21 20:59:32.647 -05 000000034 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1107=================== 15-12-21 20:59:32.647 -05 000000082 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106=================== 15-12-21 20:59:32.668 -05 000000048 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1110=================== 15-12-21 20:59:32.668 -05 000000009 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1110, Registering and Extracting C025 L001 T1111=================== 15-12-21 20:59:32.776 -05 000000038 INF: ===================Frame #101=================== 15-12-21 20:59:32.776 -05 000000061 INF: ===================Frame #101=================== 15-12-21 20:59:32.846 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:32.920 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.252C:A1\r\n 15-12-21 20:59:32.920 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:32.926 -05 000000061 INF: ===================Frame #113=================== 15-12-21 20:59:32.926 -05 000000038 INF: ===================Frame #113=================== 15-12-21 20:59:33.059 -05 000000025 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 20:59:33.077 -05 000000038 INF: ===================Frame #125=================== 15-12-21 20:59:33.077 -05 000000061 INF: ===================Frame #125=================== 15-12-21 20:59:33.135 -05 000000031 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1110=================== 15-12-21 20:59:33.169 -05 000000028 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1110, Registering and Extracting C025 L001 T1112=================== 15-12-21 20:59:33.227 -05 000000061 INF: ===================Frame #137=================== 15-12-21 20:59:33.227 -05 000000038 INF: ===================Frame #137=================== 15-12-21 20:59:33.255 -05 000000088 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1110=================== 15-12-21 20:59:33.256 -05 000000020 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106=================== 15-12-21 20:59:33.269 -05 000000063 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1113=================== 15-12-21 20:59:33.274 -05 000000068 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1113, Registering and Extracting C025 L001 T1114=================== 15-12-21 20:59:33.280 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:33.307 -05 000000072 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1113=================== 15-12-21 20:59:33.343 -05 000000027 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106=================== 15-12-21 20:59:33.352 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:33.352 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:33.376 -05 000000079 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1115=================== 15-12-21 20:59:33.376 -05 000000054 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1115, Registering and Extracting C025 L001 T1116=================== 15-12-21 20:59:33.377 -05 000000038 INF: ===================Frame #148=================== 15-12-21 20:59:33.377 -05 000000061 INF: ===================Frame #148=================== 15-12-21 20:59:33.477 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:33.494 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:33.494 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:33.630 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:33.713 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:33.713 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:34.059 -05 000000025 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 20:59:34.592 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:34.646 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 52.840C:A1\r\n 15-12-21 20:59:34.646 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:35.015 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:35.070 -05 000000025 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 20:59:35.083 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:35.083 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:35.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:35.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:35.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:35.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:35.615 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:35.615 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:36.072 -05 000000025 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 20:59:36.220 -05 000000038 INF: ===================Frame #373=================== 15-12-21 20:59:36.220 -05 000000061 INF: ===================Frame #373=================== 15-12-21 20:59:36.325 -05 000000051 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106, Registering and Extracting C025 L001 T1115=================== 15-12-21 20:59:36.371 -05 000000038 INF: ===================Frame #385=================== 15-12-21 20:59:36.371 -05 000000061 INF: ===================Frame #385=================== 15-12-21 20:59:36.522 -05 000000061 INF: ===================Frame #397=================== 15-12-21 20:59:36.522 -05 000000038 INF: ===================Frame #397=================== 15-12-21 20:59:36.673 -05 000000038 INF: ===================Frame #409=================== 15-12-21 20:59:36.673 -05 000000061 INF: ===================Frame #409=================== 15-12-21 20:59:36.828 -05 000000038 INF: ===================Frame #421=================== 15-12-21 20:59:36.828 -05 000000061 INF: ===================Frame #421=================== 15-12-21 20:59:36.903 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:36.973 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:36.973 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:36.979 -05 000000038 INF: ===================Frame #433=================== 15-12-21 20:59:36.979 -05 000000061 INF: ===================Frame #433=================== 15-12-21 20:59:37.073 -05 000000025 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 20:59:37.079 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:37.129 -05 000000061 INF: ===================Frame #445=================== 15-12-21 20:59:37.129 -05 000000038 INF: ===================Frame #445=================== 15-12-21 20:59:37.160 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:37.160 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:37.270 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:37.279 -05 000000061 INF: ===================Frame #457=================== 15-12-21 20:59:37.280 -05 000000038 INF: ===================Frame #457=================== 15-12-21 20:59:37.346 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:37.346 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:37.430 -05 000000061 INF: ===================Frame #469=================== 15-12-21 20:59:37.431 -05 000000038 INF: ===================Frame #469=================== 15-12-21 20:59:37.442 -05 000000048 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105, Registering and Extracting C025 L001 T1106=================== 15-12-21 20:59:37.581 -05 000000061 INF: ===================Frame #481=================== 15-12-21 20:59:37.581 -05 000000038 INF: ===================Frame #481=================== 15-12-21 20:59:37.584 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:37.596 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 20:59:37.596 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:37.732 -05 000000061 INF: ===================Frame #493=================== 15-12-21 20:59:37.732 -05 000000038 INF: ===================Frame #493=================== 15-12-21 20:59:37.798 -05 000000009 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103, Registering and Extracting C025 L001 T1104, Registering and Extracting C025 L001 T1105=================== 15-12-21 20:59:37.883 -05 000000061 INF: ===================Frame #505=================== 15-12-21 20:59:37.883 -05 000000038 INF: ===================Frame #505=================== 15-12-21 20:59:38.026 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:38.034 -05 000000061 INF: ===================Frame #517=================== 15-12-21 20:59:38.034 -05 000000038 INF: ===================Frame #517=================== 15-12-21 20:59:38.074 -05 000000025 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 20:59:38.096 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 16.971C:A1\r\n 15-12-21 20:59:38.096 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:38.184 -05 000000038 INF: ===================Frame #528=================== 15-12-21 20:59:38.185 -05 000000061 INF: ===================Frame #528=================== 15-12-21 20:59:38.440 -05 000000068 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103=================== 15-12-21 20:59:38.440 -05 000000028 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102, Registering and Extracting C025 L001 T1103=================== 15-12-21 20:59:38.631 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:38.657 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:38.660 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:38.701 -05 000000063 INF: ===================Registering and Extracting C025 L001 T1101, Registering and Extracting C025 L001 T1102=================== 15-12-21 20:59:38.764 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:38.781 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:38.781 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:38.825 -05 000000054 INF: ===================Registering and Extracting C025 L001 T1101=================== 15-12-21 20:59:38.889 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:38.907 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:38.907 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:38.920 -05 000000079 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 20:59:38.942 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 20:59:38.952 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 20:59:39.074 -05 000000025 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 20:59:39.114 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 20:59:39.125 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 20:59:39.246 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 20:59:39.258 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 20:59:39.284 -05 000000038 INF: ===================Frame #615=================== 15-12-21 20:59:39.307 -05 000000061 INF: ===================Frame #617=================== 15-12-21 20:59:39.381 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 20:59:39.389 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 20:59:39.434 -05 000000038 INF: ===================Frame #627=================== 15-12-21 20:59:39.457 -05 000000061 INF: ===================Frame #629=================== 15-12-21 20:59:39.490 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 20:59:39.586 -05 000000038 INF: ===================Frame #639=================== 15-12-21 20:59:39.607 -05 000000061 INF: ===================Frame #641=================== 15-12-21 20:59:39.737 -05 000000038 INF: ===================Frame #651=================== 15-12-21 20:59:39.757 -05 000000061 INF: ===================Frame #653=================== 15-12-21 20:59:39.774 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:39.841 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 57.563C:A1\r\n 15-12-21 20:59:39.841 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:39.888 -05 000000038 INF: ===================Frame #663=================== 15-12-21 20:59:39.907 -05 000000061 INF: ===================Frame #665=================== 15-12-21 20:59:39.969 -05 000000025 INF: ===================WaitCommand=================== 15-12-21 20:59:39.969 -05 000000025 INF: WaitCommand(15000) end 15-12-21 20:59:39.970 -05 000000025 INF: ====================================== 15-12-21 20:59:39.971 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:39.973 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:39.976 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:39.977 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:40.045 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:40.051 -05 000000038 INF: ===================Frame #675=================== 15-12-21 20:59:40.055 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Selecting Reagent CWM (8)=================== 15-12-21 20:59:40.055 -05 000000057 INF: Valve A2: Go to position 8 15-12-21 20:59:40.055 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 20:59:40.062 -05 000000061 INF: ===================Frame #677=================== 15-12-21 20:59:40.094 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 7\r 15-12-21 20:59:40.094 -05 000000057 INF: Valve A2: 30.606 seconds since last move, > 5.000 seconds required between moves 15-12-21 20:59:40.094 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 7 to 8 15-12-21 20:59:40.094 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW8\r 15-12-21 20:59:40.096 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 20:59:40.096 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 20:59:40.165 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:40.306 -05 000000038 INF: ===================Frame #690=================== 15-12-21 20:59:40.306 -05 000000061 INF: ===================Frame #690=================== 15-12-21 20:59:40.310 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:40.310 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:40.448 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:40.488 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:40.488 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:40.510 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 8\r 15-12-21 20:59:40.560 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:40.571 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 20:59:40.612 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:40.664 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 20:59:40.664 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:40.835 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:40.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:40.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:41.026 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 20:59:41.042 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 20:59:41.042 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:41.156 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:41.232 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 20:59:41.232 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:41.338 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:41.339 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 20:59:41.339 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:41.400 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:41.410 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 20:59:41.463 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 20:59:41.502 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 20:59:41.535 -05 000000061 INF: ===================Frame #793=================== 15-12-21 20:59:41.541 -05 000000038 INF: ===================Frame #794=================== 15-12-21 20:59:41.589 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 20:59:41.589 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 20:59:41.589 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 20:59:41.686 -05 000000061 INF: ===================Frame #805=================== 15-12-21 20:59:41.690 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P4608R\r 15-12-21 20:59:41.775 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:41.836 -05 000000061 INF: ===================Frame #817=================== 15-12-21 20:59:41.846 -05 000000038 INF: ===================Frame #818=================== 15-12-21 20:59:41.875 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:41.963 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:41.986 -05 000000061 INF: ===================Frame #829=================== 15-12-21 20:59:42.030 -05 000000038 INF: ===================Frame #832=================== 15-12-21 20:59:42.136 -05 000000061 INF: ===================Frame #841=================== 15-12-21 20:59:42.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:42.201 -05 000000038 INF: ===================Frame #846=================== 15-12-21 20:59:42.213 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:42.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:42.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:42.274 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:42.287 -05 000000061 INF: ===================Frame #853=================== 15-12-21 20:59:42.336 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:42.354 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:42.354 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:42.371 -05 000000038 INF: ===================Frame #859=================== 15-12-21 20:59:42.438 -05 000000061 INF: ===================Frame #865=================== 15-12-21 20:59:42.463 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:42.478 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:42.478 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:42.521 -05 000000038 INF: ===================Frame #871=================== 15-12-21 20:59:42.524 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:42.587 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:42.588 -05 000000061 INF: ===================Frame #877=================== 15-12-21 20:59:42.671 -05 000000038 INF: ===================Frame #883=================== 15-12-21 20:59:42.707 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:42.728 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.982C:A1\r\n 15-12-21 20:59:42.728 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:42.738 -05 000000061 INF: ===================Frame #888=================== 15-12-21 20:59:42.821 -05 000000038 INF: ===================Frame #895=================== 15-12-21 20:59:42.837 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:42.900 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:42.971 -05 000000038 INF: ===================Frame #907=================== 15-12-21 20:59:43.121 -05 000000038 INF: ===================Frame #919=================== 15-12-21 20:59:43.150 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:43.159 -05 000000061 INF: ===================Frame #922=================== 15-12-21 20:59:43.198 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:43.210 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:43.230 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 18.236C:A1\r\n 15-12-21 20:59:43.230 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:43.272 -05 000000038 INF: ===================Frame #931=================== 15-12-21 20:59:43.352 -05 000000061 INF: ===================Frame #937=================== 15-12-21 20:59:43.422 -05 000000038 INF: ===================Frame #943=================== 15-12-21 20:59:43.460 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:43.502 -05 000000061 INF: ===================Frame #949=================== 15-12-21 20:59:43.524 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:43.573 -05 000000038 INF: ===================Frame #954=================== 15-12-21 20:59:43.654 -05 000000061 INF: ===================Frame #961=================== 15-12-21 20:59:43.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:43.728 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:43.728 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:43.774 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:43.805 -05 000000061 INF: ===================Frame #973=================== 15-12-21 20:59:43.835 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:43.837 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:43.837 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 20:59:43.852 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:43.852 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:43.882 -05 000000038 INF: ===================Frame #979=================== 15-12-21 20:59:43.937 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 20:59:43.955 -05 000000061 INF: ===================Frame #985=================== 15-12-21 20:59:43.961 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:44.023 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 20:59:44.023 -05 000000057 INF: Current Position of Pump is: 4608 15-12-21 20:59:44.023 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 20:59:44.032 -05 000000038 INF: ===================Frame #991=================== 15-12-21 20:59:44.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:44.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:44.106 -05 000000061 INF: ===================Frame #997=================== 15-12-21 20:59:44.123 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 20:59:44.182 -05 000000038 INF: ===================Frame #1003=================== 15-12-21 20:59:44.208 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:44.257 -05 000000061 INF: ===================Frame #1009=================== 15-12-21 20:59:44.308 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:44.333 -05 000000038 INF: ===================Frame #1015=================== 15-12-21 20:59:44.396 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:44.409 -05 000000061 INF: ===================Frame #1021=================== 15-12-21 20:59:44.484 -05 000000038 INF: ===================Frame #1027=================== 15-12-21 20:59:44.559 -05 000000061 INF: ===================Frame #1032=================== 15-12-21 20:59:44.635 -05 000000038 INF: ===================Frame #1038=================== 15-12-21 20:59:44.648 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:44.710 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:44.710 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:44.711 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 20:59:44.711 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:44.789 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 20:59:44.789 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:44.840 -05 000000061 INF: ===================Frame #1055=================== 15-12-21 20:59:44.897 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 20:59:44.899 -05 000000038 INF: ===================Frame #1059=================== 15-12-21 20:59:44.912 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 20:59:44.912 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:44.991 -05 000000061 INF: ===================Frame #1067=================== 15-12-21 20:59:45.015 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:45.038 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.429C:A1\r\n 15-12-21 20:59:45.038 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:45.049 -05 000000038 INF: ===================Frame #1071=================== 15-12-21 20:59:45.141 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 20:59:45.144 -05 000000061 INF: ===================Frame #1079=================== 15-12-21 20:59:45.200 -05 000000038 INF: ===================Frame #1083=================== 15-12-21 20:59:45.264 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:45.264 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:45.265 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:45.266 -05 000000057 INF: WaitCommand(5000) start 15-12-21 20:59:45.266 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 20:59:45.305 -05 000000061 INF: ===================Frame #1091=================== 15-12-21 20:59:45.350 -05 000000038 INF: ===================Frame #1095=================== 15-12-21 20:59:45.433 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:45.464 -05 000000061 INF: ===================Frame #1104=================== 15-12-21 20:59:45.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:45.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:45.535 -05 000000038 INF: ===================Frame #1110=================== 15-12-21 20:59:45.624 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:45.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:45.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:45.802 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:45.807 -05 000000038 INF: ===================Frame #1131=================== 15-12-21 20:59:45.807 -05 000000061 INF: ===================Frame #1131=================== 15-12-21 20:59:45.817 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:45.817 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:45.957 -05 000000038 INF: ===================Frame #1143=================== 15-12-21 20:59:45.958 -05 000000061 INF: ===================Frame #1143=================== 15-12-21 20:59:46.108 -05 000000061 INF: ===================Frame #1155=================== 15-12-21 20:59:46.108 -05 000000038 INF: ===================Frame #1155=================== 15-12-21 20:59:46.258 -05 000000038 INF: ===================Frame #1167=================== 15-12-21 20:59:46.258 -05 000000061 INF: ===================Frame #1167=================== 15-12-21 20:59:46.266 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:46.266 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 20:59:46.408 -05 000000038 INF: ===================Frame #1179=================== 15-12-21 20:59:46.408 -05 000000061 INF: ===================Frame #1179=================== 15-12-21 20:59:46.559 -05 000000038 INF: ===================Frame #1191=================== 15-12-21 20:59:46.559 -05 000000061 INF: ===================Frame #1191=================== 15-12-21 20:59:46.709 -05 000000061 INF: ===================Frame #1202=================== 15-12-21 20:59:46.709 -05 000000038 INF: ===================Frame #1202=================== 15-12-21 20:59:47.043 -05 000000038 INF: ===================Frame #1229=================== 15-12-21 20:59:47.046 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:47.047 -05 000000061 INF: ===================Frame #1229=================== 15-12-21 20:59:47.065 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:47.065 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:47.169 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:47.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:47.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:47.197 -05 000000038 INF: ===================Frame #1241=================== 15-12-21 20:59:47.198 -05 000000061 INF: ===================Frame #1241=================== 15-12-21 20:59:47.266 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:47.268 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 20:59:47.292 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:47.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:47.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:47.348 -05 000000038 INF: ===================Frame #1250=================== 15-12-21 20:59:47.348 -05 000000061 INF: ===================Frame #1250=================== 15-12-21 20:59:47.374 -05 000000089 INF: FPGA: Recv TDIYWAIT 15-12-21 20:59:47.375 -05 000000045 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 20:59:47.386 -05 000000045 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 20:59:47.404 -05 000000078 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 20:59:47.406 -05 000000060 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 20:59:47.406 -05 000000078 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 20:59:47.406 -05 000000078 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 20:59:47.406 -05 000000078 INF: Excitation Filter 1: Moving 36 steps 15-12-21 20:59:47.406 -05 000000078 INF: FPGA: Xmit EX1MV 36\n 15-12-21 20:59:47.407 -05 000000060 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 20:59:47.407 -05 000000060 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 20:59:47.407 -05 000000060 INF: Excitation Filter 2: Moving 107 steps 15-12-21 20:59:47.410 -05 000000060 INF: FPGA: Xmit EX2MV 107\n 15-12-21 20:59:47.494 -05 000000061 INF: Camera complete - got 1250 frames. 15-12-21 20:59:47.497 -05 000000038 INF: Camera complete - got 1250 frames. 15-12-21 20:59:47.498 -05 000000061 INF: ===================CameraTDI Cleanup=================== 15-12-21 20:59:47.499 -05 000000038 INF: ===================CameraTDI Cleanup=================== 15-12-21 20:59:47.566 -05 000000056 INF: FPGA: Recv EX1MV 15-12-21 20:59:47.567 -05 000000078 INF: Excitation Filter 1: Moved 36 steps in 160.3023 ms 15-12-21 20:59:47.567 -05 000000078 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 160.4657 ms 15-12-21 20:59:47.567 -05 000000078 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 160.6226 ms 15-12-21 20:59:47.568 -05 000000078 INF: ====================================== 15-12-21 20:59:47.813 -05 000000086 INF: FPGA: Recv EX2MV 15-12-21 20:59:47.813 -05 000000060 INF: Excitation Filter 2: Moved 107 steps in 405.6595 ms 15-12-21 20:59:47.813 -05 000000060 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 405.8114 ms 15-12-21 20:59:47.813 -05 000000060 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 406.4565 ms 15-12-21 20:59:47.814 -05 000000060 INF: ====================================== 15-12-21 20:59:47.815 -05 000000045 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 20:59:47.820 -05 000000045 INF: ====================================== 15-12-21 20:59:47.837 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:47.877 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 20:59:47.877 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:47.926 -05 000000038 INF: ===================Camera TDI=================== 15-12-21 20:59:47.954 -05 000000038 INF: ====================================== 15-12-21 20:59:48.044 -05 000000061 INF: ===================Camera TDI=================== 15-12-21 20:59:48.064 -05 000000092 INF: Y Motor: Moved to 9.0765 after 16910 ms 15-12-21 20:59:48.065 -05 000000092 INF: ====================================== 15-12-21 20:59:48.070 -05 000000061 INF: ====================================== 15-12-21 20:59:48.072 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 20:59:48.073 -05 000000084 INF: ====================================== 15-12-21 20:59:48.074 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:48.081 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:48.085 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.087 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 20:59:48.123 -05 000000056 INF: FPGA: Recv TDICLINES 9383 15-12-21 20:59:48.123 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 20:59:48.186 -05 000000060 INF: FPGA: Recv TDIYERD 907647 15-12-21 20:59:48.186 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 20:59:48.251 -05 000000045 INF: FPGA: Recv ZADCR 38907 15-12-21 20:59:48.251 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.148. Y moved -60.304 mm 15-12-21 20:59:48.251 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 20:59:48.268 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:48.268 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 20:59:48.310 -05 000000023 INF: FPGA: Recv TDIPULSES 160001 15-12-21 20:59:48.310 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 20:59:48.310 -05 000000062 INF: TDIScan finished after 21871.236 ms 15-12-21 20:59:48.311 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 20:59:48.311 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 20:59:48.312 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.336 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:48.338 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.340 um 15-12-21 20:59:48.339 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.343 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.348 -05 000000089 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 20:59:48.348 -05 000000056 INF: ===================Dither Clean Up Command=================== 15-12-21 20:59:48.349 -05 000000084 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 20:59:48.353 -05 000000078 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 20:59:48.353 -05 000000089 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 20:59:48.357 -05 000000084 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 20:59:48.357 -05 000000084 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 20:59:48.364 -05 000000025 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 20:59:48.364 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 20:59:48.366 -05 000000025 INF: FPGA: Xmit ZSEL 0\n 15-12-21 20:59:48.367 -05 000000045 INF: ===================LFT:Extracting coords=================== 15-12-21 20:59:48.372 -05 000000060 INF: FPGA: Recv ZSTEP 15-12-21 20:59:48.373 -05 000000084 INF: ====================================== 15-12-21 20:59:48.374 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.226C:A1\r\n 15-12-21 20:59:48.374 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:48.407 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 20:59:48.411 -05 000000045 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 20:59:48.412 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:48.412 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:48.412 -05 000000060 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:48.417 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:48.419 -05 000000086 INF: ===================Lookup Focus Tracking=================== 15-12-21 20:59:48.419 -05 000000060 INF: ===================Lookup Focus Tracking=================== 15-12-21 20:59:48.419 -05 000000092 INF: ===================Lookup Focus Tracking=================== 15-12-21 20:59:48.420 -05 000000023 INF: ===================Lookup Focus Tracking=================== 15-12-21 20:59:48.437 -05 000000090 INF: FPGA: Recv ZSEL 15-12-21 20:59:48.437 -05 000000025 INF: FPGA: Xmit ZDACW 44635\n 15-12-21 20:59:48.438 -05 000000089 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 20:59:48.439 -05 000000089 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 20:59:48.439 -05 000000078 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 20:59:48.439 -05 000000089 INF: ====================================== 15-12-21 20:59:48.499 -05 000000090 INF: FPGA: Recv ZDACW 15-12-21 20:59:48.499 -05 000000025 INF: ====================================== 15-12-21 20:59:48.500 -05 000000078 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 20:59:48.501 -05 000000078 INF: ====================================== 15-12-21 20:59:48.606 -05 000000023 INF: LFT found best fwhm score 2.338118 in 143 ms 15-12-21 20:59:48.606 -05 000000023 INF: LFT found good score at index 8789 with fwhm value 2.338118. Next cycle, cycle 26 starting Z position for top surface is at -0.171 mm FC:B, C:25,L:1,T 15-12-21 20:59:48.607 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:48.607 -05 000000023 INF: ====================================== 15-12-21 20:59:48.614 -05 000000086 INF: LFT found best fwhm score 2.599631 in 151 ms 15-12-21 20:59:48.614 -05 000000086 INF: LFT found good score at index 7725 with fwhm value 2.599631. Next cycle, cycle 26 starting Z position for top surface is at -0.172 mm FC:B, C:25,L:1,T 15-12-21 20:59:48.615 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:48.615 -05 000000086 INF: ====================================== 15-12-21 20:59:48.653 -05 000000060 INF: LFT found best fwhm score 2.587635 in 190 ms 15-12-21 20:59:48.653 -05 000000060 INF: LFT found good score at index 3813 with fwhm value 2.587635. Next cycle, cycle 26 starting Z position for top surface is at -0.172 mm FC:B, C:25,L:1,T 15-12-21 20:59:48.654 -05 000000060 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:48.654 -05 000000092 INF: LFT found best fwhm score 2.672379 in 190 ms 15-12-21 20:59:48.654 -05 000000092 INF: LFT found good score at index 8393 with fwhm value 2.672379. Next cycle, cycle 26 starting Z position for top surface is at -0.171 mm FC:B, C:25,L:1,T 15-12-21 20:59:48.654 -05 000000060 INF: ====================================== 15-12-21 20:59:48.654 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 20:59:48.655 -05 000000092 INF: ====================================== 15-12-21 20:59:48.662 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 20:59:48.665 -05 000000045 INF: LFT weighted average best Z for top surface is at -0.172mm FC:B, C:25,L:1,T 15-12-21 20:59:48.666 -05 000000045 INF: ====================================== 15-12-21 20:59:48.668 -05 000000056 INF: ====================================== 15-12-21 20:59:48.671 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.672 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 20:59:48.672 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.673 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 20:59:48.673 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.673 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 20:59:48.674 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.674 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 20:59:48.674 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.675 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 20:59:48.675 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 20:59:48.676 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left, Waiting for image analysis=================== 15-12-21 20:59:48.676 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 20:59:48.677 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Waiting for image analysis=================== 15-12-21 20:59:48.677 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 20:59:48.677 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 20:59:48.677 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:48.678 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:48.678 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 20:59:48.681 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 1=================== 15-12-21 20:59:48.681 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 20:59:48.681 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:48.681 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface=================== 15-12-21 20:59:48.707 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 20:59:48.710 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 20:59:48.710 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 20:59:48.717 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 20:59:48.719 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 20:59:48.719 -05 000000062 INF: Compensator: Remaining IntoPath 15-12-21 20:59:48.719 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 20:59:48.720 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 20:59:48.731 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 20:59:48.731 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 20:59:48.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:48.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:48.750 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.750 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 20:59:48.750 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:48.751 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -170.3 um, section = B_1 15-12-21 20:59:48.752 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:48.753 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:48.754 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 20:59:48.754 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:48.754 -05 000000029 INF: ===================MoveEmissionFilters=================== 15-12-21 20:59:48.755 -05 000000055 INF: ===================Move X,Y, Parallel=================== 15-12-21 20:59:48.757 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 20:59:48.813 -05 000000023 INF: Z Motor: Entering MoveAbsStepped 15-12-21 20:59:48.813 -05 000000023 INF: Z Motor: Moving to -0.1729 mm, started at -0.1703 mm 15-12-21 20:59:48.813 -05 000000023 INF: FPGA: Xmit ZTRG 0\n 15-12-21 20:59:48.813 -05 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 20:59:48.813 -05 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 20:59:48.813 -05 000000025 INF: ===================Move Y Motor without settling=================== 15-12-21 20:59:48.813 -05 000000084 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 20:59:48.814 -05 000000025 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 20:59:48.814 -05 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 20:59:48.814 -05 000000025 INF: Y Motor: Xmit 1D6568846\n 15-12-21 20:59:48.814 -05 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 20:59:48.815 -05 000000025 INF: Y Motor: Xmit 1G\n 15-12-21 20:59:48.818 -05 000000038 INF: ===================Move X Motor without settling=================== 15-12-21 20:59:48.818 -05 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 20:59:48.819 -05 000000038 INF: X Motor: Xmit PR VM\n 15-12-21 20:59:48.821 -05 000000089 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 20:59:48.821 -05 000000084 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 20:59:48.821 -05 000000045 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 20:59:48.821 -05 000000089 INF: ====================================== 15-12-21 20:59:48.822 -05 000000060 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 20:59:48.822 -05 000000045 INF: Emission Filter 12: Remaining IntoPath 15-12-21 20:59:48.822 -05 000000092 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 20:59:48.822 -05 000000060 INF: ====================================== 15-12-21 20:59:48.822 -05 000000056 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 20:59:48.822 -05 000000092 INF: ====================================== 15-12-21 20:59:48.823 -05 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 20:59:48.823 -05 000000056 INF: ====================================== 15-12-21 20:59:48.824 -05 000000061 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 20:59:48.824 -05 000000089 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 20:59:48.824 -05 000000060 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 20:59:48.825 -05 000000045 INF: ====================================== 15-12-21 20:59:48.825 -05 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 20:59:48.825 -05 000000060 INF: ====================================== 15-12-21 20:59:48.826 -05 000000061 INF: ====================================== 15-12-21 20:59:48.826 -05 000000089 INF: ====================================== 15-12-21 20:59:48.831 -05 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 20:59:48.832 -05 000000084 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 20:59:48.832 -05 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 20:59:48.833 -05 000000090 INF: ====================================== 15-12-21 20:59:48.833 -05 000000084 INF: ====================================== 15-12-21 20:59:48.834 -05 000000086 INF: ====================================== 15-12-21 20:59:48.835 -05 000000078 INF: ====================================== 15-12-21 20:59:48.838 -05 000000029 INF: ====================================== 15-12-21 20:59:48.949 -05 000000086 INF: FPGA: Recv ZTRG 15-12-21 20:59:48.949 -05 000000023 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 20:59:48.950 -05 000000025 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 20:59:48.951 -05 000000025 INF: Y Motor: Recv 1G\r\n 15-12-21 20:59:48.951 -05 000000038 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 20:59:48.951 -05 000000038 INF: X Motor: Xmit PR VI\n 15-12-21 20:59:48.952 -05 000000025 INF: Y Motor: Xmit 1D\n 15-12-21 20:59:49.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:49.010 -05 000000025 INF: Y Motor: Recv 1D\r\n 15-12-21 20:59:49.010 -05 000000089 INF: FPGA: Recv ZYT 15-12-21 20:59:49.011 -05 000000023 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 20:59:49.011 -05 000000023 INF: FPGA: Xmit ZMV 45316\n 15-12-21 20:59:49.011 -05 000000038 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 20:59:49.012 -05 000000025 INF: Y Motor: Recv *6568846\r\n 15-12-21 20:59:49.013 -05 000000038 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 20:59:49.013 -05 000000038 INF: X Motor: Moving to 80.2570 mm @15.000 mm/sec, started at 76.7344 mm 15-12-21 20:59:49.013 -05 000000038 INF: X Motor: Xmit MA 8707\n 15-12-21 20:59:49.014 -05 000000054 INF: ===================Registering and Extracting C025 L001 T1201=================== 15-12-21 20:59:49.014 -05 000000079 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202=================== 15-12-21 20:59:49.014 -05 000000025 INF: Y Motor: WaitUntilStopped 62465 15-12-21 20:59:49.014 -05 000000068 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203=================== 15-12-21 20:59:49.032 -05 000000063 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204=================== 15-12-21 20:59:49.032 -05 000000028 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205=================== 15-12-21 20:59:49.032 -05 000000009 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206=================== 15-12-21 20:59:49.033 -05 000000048 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206, Registering and Extracting C025 L001 T1207=================== 15-12-21 20:59:49.042 -05 000000051 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206, Registering and Extracting C025 L001 T1207, Registering and Extracting C025 L001 T1208=================== 15-12-21 20:59:49.063 -05 000000060 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 20:59:49.063 -05 000000060 INF: FPGA: Recv ZMV 15-12-21 20:59:49.063 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 20:59:49.063 -05 000000023 INF: Z Motor: MoveAndTrigger 'ZMV' command took 52.3115 ms 15-12-21 20:59:49.065 -05 000000023 INF: FPGA: Xmit ZDACR\n 15-12-21 20:59:49.068 -05 000000038 INF: X Motor: Recv MA 8707\r\n> 15-12-21 20:59:49.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:49.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:49.072 -05 000000038 INF: X Motor: WaitUntilStopped 60235 15-12-21 20:59:49.121 -05 000000086 INF: FPGA: Recv ZDACR 45316 15-12-21 20:59:49.125 -05 000000023 INF: Z Motor: MoveAndTrigger took 311.925 ms w/comms 15-12-21 20:59:49.125 -05 000000023 INF: Z Motor: After move to -0.1729, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 20:59:49.125 -05 000000023 INF: Z Motor: MoveAbsStepped took 312.0435 ms 15-12-21 20:59:49.130 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:49.138 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 20:59:49.139 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:49.139 -05 000000078 INF: ===================Camera Arm TDI=================== 15-12-21 20:59:49.152 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:49.159 -05 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 20:59:49.159 -05 000000089 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 20:59:49.162 -05 000000089 INF: FPGA: Xmit ZSEL 3\n 15-12-21 20:59:49.186 -05 000000090 INF: FPGA: Recv ZSEL 15-12-21 20:59:49.187 -05 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 20:59:49.188 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:49.196 -05 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 20:59:49.199 -05 000000089 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 20:59:49.199 -05 000000089 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 20:59:49.209 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:49.247 -05 000000060 INF: FPGA: Recv ZSTEP 15-12-21 20:59:49.248 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:49.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:49.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:49.265 -05 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 20:59:49.302 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:49.302 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 20:59:49.303 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:49.325 -05 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 20:59:49.325 -05 000000089 INF: Z Motor: Entering ArmAbsStepped 15-12-21 20:59:49.325 -05 000000089 INF: Z Motor: Arming to move to -0.1329 mm 15-12-21 20:59:49.325 -05 000000089 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 20:59:49.371 -05 000000061 INF: FPGA: Recv ZYT 15-12-21 20:59:49.371 -05 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907645 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 20:59:49.371 -05 000000089 INF: FPGA: Xmit ZARM 34830\n 15-12-21 20:59:49.433 -05 000000090 INF: FPGA: Recv ZARM 15-12-21 20:59:49.433 -05 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9669 ms 15-12-21 20:59:49.433 -05 000000089 INF: Z Motor: ArmAbsStepped took 107.9779 ms 15-12-21 20:59:49.434 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 20:59:49.438 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:49.447 -05 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 20:59:49.470 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:49.490 -05 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 20:59:49.513 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 20:59:49.516 -05 000000089 INF: ====================================== 15-12-21 20:59:49.842 -05 000000038 INF: X Motor: Xmit PR ER\n 15-12-21 20:59:49.903 -05 000000038 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 20:59:49.903 -05 000000038 INF: X Motor: Moved to 80.2573 after 831 ms 15-12-21 20:59:49.904 -05 000000038 INF: ====================================== 15-12-21 20:59:50.163 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:50.215 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.060C:A1\r\n 15-12-21 20:59:50.215 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:50.282 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:50.282 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:50.282 -05 000000057 INF: WaitCommand(5000) end 15-12-21 20:59:50.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:50.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:50.379 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 20:59:50.417 -05 000000045 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 20:59:50.417 -05 000000084 INF: ===================WaitCommand=================== 15-12-21 20:59:50.417 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:50.421 -05 000000084 INF: WaitCommand(15000) start 15-12-21 20:59:50.422 -05 000000084 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 20:59:50.454 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:50.554 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:50.647 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:50.670 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:50.691 -05 000000078 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 20:59:50.691 -05 000000078 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 20:59:50.691 -05 000000078 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 20:59:50.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:50.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:50.753 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 20:59:50.841 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 20:59:50.841 -05 000000045 INF: Current Position of Pump is: 4608 15-12-21 20:59:50.841 -05 000000045 INF: Dispense Steps 48000 is greater than steps to home syringe 4608, reducing number of steps to 4608 15-12-21 20:59:50.841 -05 000000045 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 20:59:50.864 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:50.949 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD4608R\r 15-12-21 20:59:50.953 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:50.953 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:51.014 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:51.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:51.114 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:51.137 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:51.137 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:51.200 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:51.423 -05 000000084 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 20:59:51.451 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:51.525 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:51.775 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:51.854 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:52.128 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:52.182 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:52.182 -05 000000045 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 20:59:52.183 -05 000000045 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 20:59:52.282 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 20:59:52.305 -05 000000078 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 20:59:52.305 -05 000000078 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 20:59:52.305 -05 000000078 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 20:59:52.307 -05 000000078 INF: ====================================== 15-12-21 20:59:52.309 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 20:59:52.315 -05 000000023 INF: ====================================== 15-12-21 20:59:52.368 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:52.415 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:52.424 -05 000000084 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 20:59:52.431 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:52.431 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:52.468 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:52.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:52.557 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 20:59:52.558 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:52.558 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:52.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:52.684 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:52.684 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:52.685 -05 000000025 INF: Y Motor: Moved to 70.6885 after 3670 ms 15-12-21 20:59:52.686 -05 000000025 INF: ====================================== 15-12-21 20:59:52.692 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 20:59:52.694 -05 000000055 INF: ====================================== 15-12-21 20:59:52.702 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 20:59:52.703 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:52.704 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 20:59:52.807 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 20:59:52.809 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 20:59:52.810 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 20:59:52.867 -05 000000038 INF: FPGA: Recv ZFREQCL 15-12-21 20:59:52.868 -05 000000045 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 20:59:52.868 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 20:59:52.868 -05 000000045 INF: ====================================== 15-12-21 20:59:52.868 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:52.869 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 20:59:52.929 -05 000000086 INF: FPGA: Recv TDIYERD 7068850 15-12-21 20:59:52.929 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 20:59:52.930 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:52.931 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:52.932 -05 000000023 INF: ===================TDI FPGA Arm=================== 15-12-21 20:59:52.933 -05 000000038 INF: ===================Set YMotor gains for scans=================== 15-12-21 20:59:52.933 -05 000000038 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 20:59:52.933 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:52.942 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 20:59:52.945 -05 000000023 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 20:59:52.986 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:52.991 -05 000000041 INF: FPGA: Recv TDIYPOS 15-12-21 20:59:52.992 -05 000000038 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 20:59:52.992 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:52.993 -05 000000038 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 20:59:52.993 -05 000000038 INF: ====================================== 15-12-21 20:59:53.000 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 20:59:53.000 -05 000000023 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 20:59:53.053 -05 000000060 INF: FPGA: Recv TDIYARM3 15-12-21 20:59:53.053 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 20:59:53.055 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 20:59:53.055 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:53.061 -05 000000023 INF: ===================TDI FPGA Arm=================== 15-12-21 20:59:53.063 -05 000000023 INF: ====================================== 15-12-21 20:59:53.065 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 20:59:53.069 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 20:59:53.069 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:53.070 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:53.076 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:53.092 -05 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 20:59:53.092 -05 000000090 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 20:59:53.097 -05 000000089 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 20:59:53.114 -05 000000089 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 20:59:53.114 -05 000000089 INF: Excitation Filter 1: Moving -36 steps 15-12-21 20:59:53.114 -05 000000089 INF: FPGA: Xmit EX1MV -36\n 15-12-21 20:59:53.114 -05 000000090 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 20:59:53.114 -05 000000090 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 20:59:53.115 -05 000000090 INF: Excitation Filter 2: Moving -107 steps 15-12-21 20:59:53.123 -05 000000090 INF: FPGA: Xmit EX2MV -107\n 15-12-21 20:59:53.266 -05 000000038 INF: FPGA: Recv EX1MV 15-12-21 20:59:53.268 -05 000000089 INF: Excitation Filter 1: Moved -36 steps in 154.0955 ms 15-12-21 20:59:53.286 -05 000000089 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 189.3916 ms 15-12-21 20:59:53.286 -05 000000089 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 189.5566 ms 15-12-21 20:59:53.313 -05 000000089 INF: ====================================== 15-12-21 20:59:53.424 -05 000000084 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 20:59:53.490 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:53.506 -05 000000025 INF: FPGA: Recv EX2MV 15-12-21 20:59:53.506 -05 000000090 INF: Excitation Filter 2: Moved -107 steps in 391.4791 ms 15-12-21 20:59:53.506 -05 000000090 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 391.6191 ms 15-12-21 20:59:53.506 -05 000000090 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 391.7405 ms 15-12-21 20:59:53.507 -05 000000090 INF: ====================================== 15-12-21 20:59:53.513 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:53.516 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 20:59:53.524 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 20:59:53.525 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 20:59:53.525 -05 000000086 INF: ===================FPGA Z Wait=================== 15-12-21 20:59:53.525 -05 000000060 INF: ===================Move Y Motor without settling=================== 15-12-21 20:59:53.525 -05 000000086 INF: FPGA: Xmit ZWAIT\n 15-12-21 20:59:53.525 -05 000000060 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 20:59:53.525 -05 000000060 INF: Y Motor: Xmit 1D407662\n 15-12-21 20:59:53.530 -05 000000060 INF: Y Motor: Xmit 1G\n 15-12-21 20:59:53.530 -05 000000056 INF: ===================Camera TDI, Parallel=================== 15-12-21 20:59:53.534 -05 000000061 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 20:59:53.539 -05 000000061 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 20:59:53.543 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 20:59:53.543 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 20:59:53.569 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.876C:A1\r\n 15-12-21 20:59:53.569 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:53.569 -05 000000060 INF: Y Motor: Recv 1D407662\r\n 15-12-21 20:59:53.570 -05 000000060 INF: Y Motor: Recv 1G\r\n 15-12-21 20:59:53.571 -05 000000060 INF: Y Motor: Xmit 1D\n 15-12-21 20:59:53.631 -05 000000060 INF: Y Motor: Recv 1D\r\n 15-12-21 20:59:53.632 -05 000000060 INF: Y Motor: Recv *407662\r\n 15-12-21 20:59:53.636 -05 000000060 INF: Y Motor: WaitUntilStopped 76451 15-12-21 20:59:53.824 -05 000000045 INF: FPGA: Recv ZWAIT 15-12-21 20:59:53.825 -05 000000086 INF: ====================================== 15-12-21 20:59:54.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:54.020 -05 000000041 INF: ===================Frame #3=================== 15-12-21 20:59:54.020 -05 000000078 INF: ===================Frame #3=================== 15-12-21 20:59:54.082 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:54.082 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:54.171 -05 000000078 INF: ===================Frame #15=================== 15-12-21 20:59:54.172 -05 000000041 INF: ===================Frame #15=================== 15-12-21 20:59:54.224 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:54.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:54.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:54.323 -05 000000078 INF: ===================Frame #27=================== 15-12-21 20:59:54.323 -05 000000041 INF: ===================Frame #27=================== 15-12-21 20:59:54.396 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:54.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:54.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:54.425 -05 000000084 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 20:59:54.473 -05 000000078 INF: ===================Frame #39=================== 15-12-21 20:59:54.473 -05 000000041 INF: ===================Frame #39=================== 15-12-21 20:59:54.604 -05 000000054 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206=================== 15-12-21 20:59:54.605 -05 000000068 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206=================== 15-12-21 20:59:54.623 -05 000000041 INF: ===================Frame #51=================== 15-12-21 20:59:54.623 -05 000000078 INF: ===================Frame #51=================== 15-12-21 20:59:54.689 -05 000000088 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206, Registering and Extracting C025 L001 T1209, Registering and Extracting C025 L001 T1210=================== 15-12-21 20:59:54.690 -05 000000027 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206, Registering and Extracting C025 L001 T1209, Registering and Extracting C025 L001 T1210=================== 15-12-21 20:59:54.774 -05 000000078 INF: ===================Frame #63=================== 15-12-21 20:59:54.775 -05 000000041 INF: ===================Frame #63=================== 15-12-21 20:59:54.933 -05 000000078 INF: ===================Frame #75=================== 15-12-21 20:59:54.933 -05 000000041 INF: ===================Frame #75=================== 15-12-21 20:59:55.084 -05 000000041 INF: ===================Frame #88=================== 15-12-21 20:59:55.084 -05 000000078 INF: ===================Frame #87=================== 15-12-21 20:59:55.119 -05 000000079 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206, Registering and Extracting C025 L001 T1209=================== 15-12-21 20:59:55.119 -05 000000028 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1206=================== 15-12-21 20:59:55.119 -05 000000009 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205=================== 15-12-21 20:59:55.190 -05 000000072 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1212, Registering and Extracting C025 L001 T1213=================== 15-12-21 20:59:55.190 -05 000000044 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1212, Registering and Extracting C025 L001 T1213=================== 15-12-21 20:59:55.190 -05 000000031 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1212, Registering and Extracting C025 L001 T1213=================== 15-12-21 20:59:55.235 -05 000000078 INF: ===================Frame #99=================== 15-12-21 20:59:55.396 -05 000000078 INF: ===================Frame #112=================== 15-12-21 20:59:55.425 -05 000000084 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 20:59:55.452 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 20:59:55.456 -05 000000048 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1212=================== 15-12-21 20:59:55.466 -05 000000063 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211=================== 15-12-21 20:59:55.473 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.797C:A1\r\n 15-12-21 20:59:55.473 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:55.496 -05 000000020 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1214=================== 15-12-21 20:59:55.496 -05 000000034 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1214, Registering and Extracting C025 L001 T1215=================== 15-12-21 20:59:55.527 -05 000000051 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1214=================== 15-12-21 20:59:55.597 -05 000000082 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1214, Registering and Extracting C025 L001 T1216=================== 15-12-21 20:59:55.738 -05 000000041 INF: ===================Frame #139=================== 15-12-21 20:59:55.758 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:55.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:55.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:55.893 -05 000000041 INF: ===================Frame #151=================== 15-12-21 20:59:55.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:55.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:55.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:56.044 -05 000000041 INF: ===================Frame #163=================== 15-12-21 20:59:56.100 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:56.162 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:56.162 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:56.195 -05 000000041 INF: ===================Frame #175=================== 15-12-21 20:59:56.346 -05 000000041 INF: ===================Frame #187=================== 15-12-21 20:59:56.425 -05 000000084 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 20:59:56.520 -05 000000041 INF: ===================Frame #199=================== 15-12-21 20:59:56.536 -05 000000078 INF: ===================Frame #202=================== 15-12-21 20:59:56.695 -05 000000041 INF: ===================Frame #215=================== 15-12-21 20:59:56.846 -05 000000041 INF: ===================Frame #227=================== 15-12-21 20:59:56.997 -05 000000041 INF: ===================Frame #239=================== 15-12-21 20:59:57.149 -05 000000041 INF: ===================Frame #251=================== 15-12-21 20:59:57.325 -05 000000041 INF: ===================Frame #265=================== 15-12-21 20:59:57.426 -05 000000084 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 20:59:57.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:57.454 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:57.454 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:57.477 -05 000000041 INF: ===================Frame #277=================== 15-12-21 20:59:57.480 -05 000000078 INF: ===================Frame #277=================== 15-12-21 20:59:57.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:57.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:57.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:57.628 -05 000000041 INF: ===================Frame #289=================== 15-12-21 20:59:57.630 -05 000000078 INF: ===================Frame #289=================== 15-12-21 20:59:57.725 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:57.780 -05 000000078 INF: ===================Frame #301=================== 15-12-21 20:59:57.780 -05 000000041 INF: ===================Frame #301=================== 15-12-21 20:59:57.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:57.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:57.931 -05 000000078 INF: ===================Frame #313=================== 15-12-21 20:59:57.931 -05 000000041 INF: ===================Frame #313=================== 15-12-21 20:59:58.082 -05 000000078 INF: ===================Frame #325=================== 15-12-21 20:59:58.082 -05 000000041 INF: ===================Frame #325=================== 15-12-21 20:59:58.237 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 20:59:58.238 -05 000000041 INF: ===================Frame #337=================== 15-12-21 20:59:58.238 -05 000000078 INF: ===================Frame #337=================== 15-12-21 20:59:58.267 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 20:59:58.267 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:58.390 -05 000000078 INF: ===================Frame #349=================== 15-12-21 20:59:58.390 -05 000000041 INF: ===================Frame #349=================== 15-12-21 20:59:58.441 -05 000000084 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 20:59:58.541 -05 000000078 INF: ===================Frame #361=================== 15-12-21 20:59:58.541 -05 000000041 INF: ===================Frame #361=================== 15-12-21 20:59:58.671 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 20:59:58.692 -05 000000041 INF: ===================Frame #373=================== 15-12-21 20:59:58.692 -05 000000078 INF: ===================Frame #373=================== 15-12-21 20:59:58.704 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.590C:A1\r\n 15-12-21 20:59:58.704 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:58.842 -05 000000078 INF: ===================Frame #385=================== 15-12-21 20:59:58.842 -05 000000041 INF: ===================Frame #385=================== 15-12-21 20:59:58.890 -05 000000088 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211, Registering and Extracting C025 L001 T1214=================== 15-12-21 20:59:58.993 -05 000000078 INF: ===================Frame #397=================== 15-12-21 20:59:58.993 -05 000000041 INF: ===================Frame #397=================== 15-12-21 20:59:59.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 20:59:59.077 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 20:59:59.077 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:59.145 -05 000000078 INF: ===================Frame #409=================== 15-12-21 20:59:59.145 -05 000000041 INF: ===================Frame #409=================== 15-12-21 20:59:59.179 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 20:59:59.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:59.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:59.296 -05 000000041 INF: ===================Frame #421=================== 15-12-21 20:59:59.296 -05 000000078 INF: ===================Frame #421=================== 15-12-21 20:59:59.309 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 20:59:59.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 20:59:59.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 20:59:59.442 -05 000000084 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 20:59:59.446 -05 000000041 INF: ===================Frame #432=================== 15-12-21 20:59:59.446 -05 000000078 INF: ===================Frame #432=================== 15-12-21 20:59:59.477 -05 000000027 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205, Registering and Extracting C025 L001 T1211=================== 15-12-21 20:59:59.675 -05 000000031 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204, Registering and Extracting C025 L001 T1205=================== 15-12-21 20:59:59.878 -05 000000044 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203, Registering and Extracting C025 L001 T1204=================== 15-12-21 21:00:00.047 -05 000000072 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202, Registering and Extracting C025 L001 T1203=================== 15-12-21 21:00:00.132 -05 000000020 INF: ===================Registering and Extracting C025 L001 T1201, Registering and Extracting C025 L001 T1202=================== 15-12-21 21:00:00.321 -05 000000034 INF: ===================Registering and Extracting C025 L001 T1201=================== 15-12-21 21:00:00.327 -05 000000078 INF: ===================Frame #502=================== 15-12-21 21:00:00.424 -05 000000082 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:00:00.442 -05 000000084 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 21:00:00.506 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:00.514 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:00:00.556 -05 000000041 INF: ===================Frame #520=================== 15-12-21 21:00:00.598 -05 000000078 INF: ===================Frame #524=================== 15-12-21 21:00:00.618 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:00.628 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:00.636 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.326C:A1\r\n 15-12-21 21:00:00.636 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:00.638 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:00:00.739 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:00.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:00.745 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:00:00.763 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:00.763 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:00.790 -05 000000078 INF: ===================Frame #539=================== 15-12-21 21:00:00.834 -05 000000041 INF: ===================Frame #542=================== 15-12-21 21:00:00.871 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:00.874 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:00.880 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:00:00.887 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:00.887 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:00.942 -05 000000078 INF: ===================Frame #551=================== 15-12-21 21:00:00.989 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:00.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:01.020 -05 000000041 INF: ===================Frame #557=================== 15-12-21 21:00:01.073 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:01.073 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:01.092 -05 000000078 INF: ===================Frame #563=================== 15-12-21 21:00:01.170 -05 000000041 INF: ===================Frame #569=================== 15-12-21 21:00:01.247 -05 000000078 INF: ===================Frame #575=================== 15-12-21 21:00:01.321 -05 000000041 INF: ===================Frame #581=================== 15-12-21 21:00:01.398 -05 000000078 INF: ===================Frame #587=================== 15-12-21 21:00:01.443 -05 000000084 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 21:00:01.472 -05 000000041 INF: ===================Frame #593=================== 15-12-21 21:00:01.550 -05 000000078 INF: ===================Frame #599=================== 15-12-21 21:00:01.622 -05 000000041 INF: ===================Frame #604=================== 15-12-21 21:00:01.701 -05 000000078 INF: ===================Frame #611=================== 15-12-21 21:00:01.754 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 21:00:01.853 -05 000000078 INF: ===================Frame #623=================== 15-12-21 21:00:01.915 -05 000000041 INF: ===================Frame #628=================== 15-12-21 21:00:02.004 -05 000000078 INF: ===================Frame #635=================== 15-12-21 21:00:02.100 -05 000000041 INF: ===================Frame #642=================== 15-12-21 21:00:02.156 -05 000000078 INF: ===================Frame #647=================== 15-12-21 21:00:02.274 -05 000000041 INF: ===================Frame #656=================== 15-12-21 21:00:02.304 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:02.306 -05 000000078 INF: ===================Frame #659=================== 15-12-21 21:00:02.323 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:02.323 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:02.430 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:02.443 -05 000000084 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 21:00:02.447 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:02.447 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:02.447 -05 000000041 INF: ===================Frame #670=================== 15-12-21 21:00:02.456 -05 000000078 INF: ===================Frame #670=================== 15-12-21 21:00:02.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:02.574 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:02.574 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:02.620 -05 000000041 INF: ===================Frame #683=================== 15-12-21 21:00:02.771 -05 000000041 INF: ===================Frame #695=================== 15-12-21 21:00:02.783 -05 000000078 INF: ===================Frame #696=================== 15-12-21 21:00:02.923 -05 000000041 INF: ===================Frame #707=================== 15-12-21 21:00:02.976 -05 000000078 INF: ===================Frame #711=================== 15-12-21 21:00:03.073 -05 000000041 INF: ===================Frame #719=================== 15-12-21 21:00:03.126 -05 000000078 INF: ===================Frame #723=================== 15-12-21 21:00:03.226 -05 000000041 INF: ===================Frame #731=================== 15-12-21 21:00:03.277 -05 000000078 INF: ===================Frame #735=================== 15-12-21 21:00:03.376 -05 000000041 INF: ===================Frame #743=================== 15-12-21 21:00:03.380 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:03.427 -05 000000078 INF: ===================Frame #747=================== 15-12-21 21:00:03.444 -05 000000084 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 21:00:03.446 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 21:00:03.446 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:03.526 -05 000000041 INF: ===================Frame #755=================== 15-12-21 21:00:03.577 -05 000000078 INF: ===================Frame #759=================== 15-12-21 21:00:03.676 -05 000000041 INF: ===================Frame #767=================== 15-12-21 21:00:03.727 -05 000000078 INF: ===================Frame #771=================== 15-12-21 21:00:03.807 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:03.822 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:03.822 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:03.826 -05 000000041 INF: ===================Frame #779=================== 15-12-21 21:00:03.877 -05 000000078 INF: ===================Frame #783=================== 15-12-21 21:00:03.929 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:03.946 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.230C:A1\r\n 15-12-21 21:00:03.946 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:03.977 -05 000000041 INF: ===================Frame #791=================== 15-12-21 21:00:04.027 -05 000000078 INF: ===================Frame #795=================== 15-12-21 21:00:04.050 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:04.071 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:04.071 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:04.128 -05 000000041 INF: ===================Frame #803=================== 15-12-21 21:00:04.177 -05 000000078 INF: ===================Frame #806=================== 15-12-21 21:00:04.180 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:04.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:04.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:04.279 -05 000000041 INF: ===================Frame #814=================== 15-12-21 21:00:04.445 -05 000000084 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 21:00:04.545 -05 000000078 INF: ===================Frame #836=================== 15-12-21 21:00:04.678 -05 000000041 INF: ===================Frame #846=================== 15-12-21 21:00:04.735 -05 000000078 INF: ===================Frame #851=================== 15-12-21 21:00:04.871 -05 000000041 INF: ===================Frame #861=================== 15-12-21 21:00:04.885 -05 000000078 INF: ===================Frame #862=================== 15-12-21 21:00:05.022 -05 000000041 INF: ===================Frame #873=================== 15-12-21 21:00:05.089 -05 000000078 INF: ===================Frame #878=================== 15-12-21 21:00:05.173 -05 000000041 INF: ===================Frame #885=================== 15-12-21 21:00:05.273 -05 000000078 INF: ===================Frame #893=================== 15-12-21 21:00:05.323 -05 000000041 INF: ===================Frame #897=================== 15-12-21 21:00:05.424 -05 000000078 INF: ===================Frame #905=================== 15-12-21 21:00:05.424 -05 000000084 INF: ===================WaitCommand=================== 15-12-21 21:00:05.424 -05 000000084 INF: WaitCommand(15000) end 15-12-21 21:00:05.425 -05 000000084 INF: ====================================== 15-12-21 21:00:05.427 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:00:05.428 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:00:05.430 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:00:05.430 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle=================== 15-12-21 21:00:05.432 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:05.433 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:05.434 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:05.434 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:05.475 -05 000000041 INF: ===================Frame #909=================== 15-12-21 21:00:05.515 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:05.517 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent CWM (8)=================== 15-12-21 21:00:05.517 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:05.517 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 21:00:05.574 -05 000000078 INF: ===================Frame #917=================== 15-12-21 21:00:05.596 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:05.684 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:00:05.684 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:05.684 -05 000000041 INF: ===================Frame #925=================== 15-12-21 21:00:05.735 -05 000000078 INF: ===================Frame #930=================== 15-12-21 21:00:05.862 -05 000000041 INF: ===================Frame #940=================== 15-12-21 21:00:05.883 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:06.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:06.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:06.137 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:06.206 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.956C:A1\r\n 15-12-21 21:00:06.206 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:06.308 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 21:00:06.332 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:00:06.332 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:06.419 -05 000000078 INF: ===================Frame #984=================== 15-12-21 21:00:06.434 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:06.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:06.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:06.481 -05 000000041 INF: ===================Frame #989=================== 15-12-21 21:00:06.557 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:06.584 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:00:06.584 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:06.631 -05 000000041 INF: ===================Frame #1000=================== 15-12-21 21:00:06.648 -05 000000078 INF: ===================Frame #1002=================== 15-12-21 21:00:06.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:06.685 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:06.686 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 21:00:06.686 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:06.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:06.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:06.768 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:06.776 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:00:06.848 -05 000000078 INF: ===================Frame #1018=================== 15-12-21 21:00:06.869 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:00:06.894 -05 000000041 INF: ===================Frame #1021=================== 15-12-21 21:00:06.954 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 21:00:06.954 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 21:00:06.955 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 21:00:07.032 -05 000000078 INF: ===================Frame #1032=================== 15-12-21 21:00:07.044 -05 000000041 INF: ===================Frame #1033=================== 15-12-21 21:00:07.054 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P18240R\r 15-12-21 21:00:07.143 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:07.194 -05 000000041 INF: ===================Frame #1045=================== 15-12-21 21:00:07.210 -05 000000078 INF: ===================Frame #1046=================== 15-12-21 21:00:07.243 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:07.329 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:07.345 -05 000000041 INF: ===================Frame #1057=================== 15-12-21 21:00:07.378 -05 000000078 INF: ===================Frame #1059=================== 15-12-21 21:00:07.495 -05 000000041 INF: ===================Frame #1069=================== 15-12-21 21:00:07.528 -05 000000078 INF: ===================Frame #1071=================== 15-12-21 21:00:07.579 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:07.640 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:07.645 -05 000000041 INF: ===================Frame #1081=================== 15-12-21 21:00:07.678 -05 000000078 INF: ===================Frame #1083=================== 15-12-21 21:00:07.796 -05 000000041 INF: ===================Frame #1093=================== 15-12-21 21:00:07.828 -05 000000078 INF: ===================Frame #1095=================== 15-12-21 21:00:07.890 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:07.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:07.947 -05 000000041 INF: ===================Frame #1104=================== 15-12-21 21:00:07.954 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:07.982 -05 000000078 INF: ===================Frame #1107=================== 15-12-21 21:00:08.016 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:08.016 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:08.122 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:08.132 -05 000000078 INF: ===================Frame #1119=================== 15-12-21 21:00:08.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:08.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:08.204 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:08.225 -05 000000041 INF: ===================Frame #1126=================== 15-12-21 21:00:08.251 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:08.266 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:08.267 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:08.267 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:08.283 -05 000000078 INF: ===================Frame #1131=================== 15-12-21 21:00:08.407 -05 000000041 INF: ===================Frame #1141=================== 15-12-21 21:00:08.433 -05 000000078 INF: ===================Frame #1143=================== 15-12-21 21:00:08.516 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:08.552 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:08.558 -05 000000041 INF: ===================Frame #1153=================== 15-12-21 21:00:08.577 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:08.578 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 21:00:08.578 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:08.583 -05 000000078 INF: ===================Frame #1155=================== 15-12-21 21:00:08.709 -05 000000041 INF: ===================Frame #1165=================== 15-12-21 21:00:08.733 -05 000000078 INF: ===================Frame #1167=================== 15-12-21 21:00:08.827 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:08.860 -05 000000041 INF: ===================Frame #1177=================== 15-12-21 21:00:08.883 -05 000000078 INF: ===================Frame #1178=================== 15-12-21 21:00:08.888 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:09.011 -05 000000041 INF: ===================Frame #1189=================== 15-12-21 21:00:09.051 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:09.079 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.973C:A1\r\n 15-12-21 21:00:09.079 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:09.139 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:09.161 -05 000000041 INF: ===================Frame #1200=================== 15-12-21 21:00:09.169 -05 000000078 INF: ===================Frame #1201=================== 15-12-21 21:00:09.203 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:09.319 -05 000000078 INF: ===================Frame #1213=================== 15-12-21 21:00:09.397 -05 000000041 INF: ===================Frame #1219=================== 15-12-21 21:00:09.453 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:09.469 -05 000000078 INF: ===================Frame #1225=================== 15-12-21 21:00:09.513 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:09.547 -05 000000041 INF: ===================Frame #1231=================== 15-12-21 21:00:09.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:09.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:09.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:09.622 -05 000000078 INF: ===================Frame #1237=================== 15-12-21 21:00:09.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:09.697 -05 000000041 INF: ===================Frame #1243=================== 15-12-21 21:00:09.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:09.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:09.763 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:09.774 -05 000000078 INF: ===================Frame #1249=================== 15-12-21 21:00:09.811 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:09.826 -05 000000086 INF: FPGA: Recv TDIYWAIT 15-12-21 21:00:09.827 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:09.827 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:00:09.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:09.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:09.829 -05 000000061 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:00:09.830 -05 000000038 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:00:09.831 -05 000000038 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:00:09.831 -05 000000038 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:00:09.831 -05 000000038 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:00:09.831 -05 000000038 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:00:09.836 -05 000000055 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:00:09.838 -05 000000055 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:00:09.838 -05 000000055 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:00:09.838 -05 000000055 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:00:09.848 -05 000000041 INF: ===================Frame #1250=================== 15-12-21 21:00:09.866 -05 000000055 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:00:09.902 -05 000000041 INF: Camera complete - got 1250 frames. 15-12-21 21:00:09.906 -05 000000041 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:00:10.012 -05 000000025 INF: FPGA: Recv EX1MV 15-12-21 21:00:10.012 -05 000000055 INF: Excitation Filter 1: Moved 36 steps in 173.8638 ms 15-12-21 21:00:10.012 -05 000000055 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 173.971 ms 15-12-21 21:00:10.012 -05 000000055 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 174.0575 ms 15-12-21 21:00:10.013 -05 000000055 INF: ====================================== 15-12-21 21:00:10.019 -05 000000078 INF: ===================Frame #1250=================== 15-12-21 21:00:10.019 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 21:00:10.046 -05 000000041 INF: ====================================== 15-12-21 21:00:10.077 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:10.097 -05 000000078 INF: Camera complete - got 1250 frames. 15-12-21 21:00:10.099 -05 000000078 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:00:10.138 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:10.217 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:00:10.238 -05 000000078 INF: ====================================== 15-12-21 21:00:10.240 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 21:00:10.245 -05 000000056 INF: ====================================== 15-12-21 21:00:10.263 -05 000000090 INF: FPGA: Recv EX2MV 15-12-21 21:00:10.263 -05 000000038 INF: Excitation Filter 2: Moved 107 steps in 432.7016 ms 15-12-21 21:00:10.263 -05 000000038 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 432.8276 ms 15-12-21 21:00:10.263 -05 000000038 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 432.9158 ms 15-12-21 21:00:10.266 -05 000000038 INF: ====================================== 15-12-21 21:00:10.269 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:00:10.274 -05 000000061 INF: ====================================== 15-12-21 21:00:10.392 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:10.470 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:10.531 -05 000000060 INF: Y Motor: Moved to 9.0764 after 16895 ms 15-12-21 21:00:10.531 -05 000000060 INF: ====================================== 15-12-21 21:00:10.533 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:10.535 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:10.537 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:10.538 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:00:10.589 -05 000000090 INF: FPGA: Recv TDICLINES 9634 15-12-21 21:00:10.589 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:00:10.667 -05 000000025 INF: FPGA: Recv TDIYERD 907644 15-12-21 21:00:10.667 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 21:00:10.720 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:10.729 -05 000000056 INF: FPGA: Recv ZADCR 38948 15-12-21 21:00:10.731 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.148. Y moved -60.304 mm 15-12-21 21:00:10.732 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:00:10.790 -05 000000078 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:00:10.791 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:00:10.791 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:10.791 -05 000000062 INF: TDIScan finished after 22058.6196 ms 15-12-21 21:00:10.791 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:00:10.791 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:00:10.793 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:10.824 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.009 um 15-12-21 21:00:10.825 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:10.830 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:10.844 -05 000000086 INF: ===================Dither Clean Up Command=================== 15-12-21 21:00:10.844 -05 000000090 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:00:10.845 -05 000000090 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:00:10.845 -05 000000025 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:00:10.845 -05 000000037 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:00:10.845 -05 000000025 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:00:10.845 -05 000000025 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:00:10.849 -05 000000060 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:00:10.849 -05 000000038 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:10.850 -05 000000038 INF: ===================LFT:Extracting coords=================== 15-12-21 21:00:10.851 -05 000000060 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:00:10.899 -05 000000038 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:10.901 -05 000000038 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:00:10.904 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:10.906 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:10.906 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:10.907 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:10.907 -05 000000041 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:10.907 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:10.907 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:10.910 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:10.916 -05 000000061 INF: FPGA: Recv ZSTEP 15-12-21 21:00:10.916 -05 000000061 INF: FPGA: Recv ZSEL 15-12-21 21:00:10.916 -05 000000060 INF: FPGA: Xmit ZDACW 45316\n 15-12-21 21:00:10.917 -05 000000090 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:00:10.917 -05 000000025 INF: ====================================== 15-12-21 21:00:10.918 -05 000000090 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:00:10.918 -05 000000037 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:00:10.918 -05 000000090 INF: ====================================== 15-12-21 21:00:10.980 -05 000000025 INF: FPGA: Recv ZDACW 15-12-21 21:00:10.981 -05 000000037 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:00:10.981 -05 000000060 INF: ====================================== 15-12-21 21:00:10.982 -05 000000037 INF: ====================================== 15-12-21 21:00:11.041 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:11.084 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:11.105 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:11.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:11.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:11.127 -05 000000041 INF: LFT found best fwhm score 2.339968 in 176 ms 15-12-21 21:00:11.127 -05 000000041 INF: LFT found good score at index 169 with fwhm value 2.339968. Next cycle, cycle 26 starting Z position for top surface is at -0.177 mm FC:B, C:25,L:2,T 15-12-21 21:00:11.128 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:11.128 -05 000000041 INF: ====================================== 15-12-21 21:00:11.139 -05 000000055 INF: LFT found best fwhm score 2.580559 in 186 ms 15-12-21 21:00:11.139 -05 000000055 INF: LFT found good score at index 8977 with fwhm value 2.580559. Next cycle, cycle 26 starting Z position for top surface is at -0.175 mm FC:B, C:25,L:2,T 15-12-21 21:00:11.140 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:11.140 -05 000000055 INF: ====================================== 15-12-21 21:00:11.141 -05 000000056 INF: LFT found best fwhm score 2.559068 in 186 ms 15-12-21 21:00:11.141 -05 000000056 INF: LFT found good score at index 2181 with fwhm value 2.559068. Next cycle, cycle 26 starting Z position for top surface is at -0.176 mm FC:B, C:25,L:2,T 15-12-21 21:00:11.142 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:11.142 -05 000000056 INF: ====================================== 15-12-21 21:00:11.143 -05 000000045 INF: LFT found best fwhm score 2.670475 in 191 ms 15-12-21 21:00:11.143 -05 000000045 INF: LFT found good score at index 6921 with fwhm value 2.670475. Next cycle, cycle 26 starting Z position for top surface is at -0.175 mm FC:B, C:25,L:2,T 15-12-21 21:00:11.143 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:11.143 -05 000000045 INF: ====================================== 15-12-21 21:00:11.150 -05 000000038 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:11.153 -05 000000038 INF: LFT weighted average best Z for top surface is at -0.176mm FC:B, C:25,L:2,T 15-12-21 21:00:11.154 -05 000000038 INF: ====================================== 15-12-21 21:00:11.157 -05 000000086 INF: ====================================== 15-12-21 21:00:11.160 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:11.163 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:00:11.164 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:11.164 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:00:11.164 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:11.164 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:00:11.165 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:11.165 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:00:11.165 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:11.165 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 21:00:11.166 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 21:00:11.167 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 21:00:11.168 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 21:00:11.168 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:00:11.168 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 21:00:11.168 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:00:11.170 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 21:00:11.171 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:00:11.171 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:11.172 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:00:11.172 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:00:11.187 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:11.188 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:00:11.188 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:11.188 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -172.9 um, section = B_1 15-12-21 21:00:11.191 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:00:11.192 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:00:11.196 -05 000000090 INF: ===================Move X,Y=================== 15-12-21 21:00:11.196 -05 000000060 INF: ===================MoveEmissionFilters=================== 15-12-21 21:00:11.196 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:00:11.208 -05 000000090 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:00:11.208 -05 000000041 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:00:11.212 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:00:11.212 -05 000000045 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:00:11.212 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:00:11.212 -05 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:00:11.213 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:00:11.213 -05 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:00:11.213 -05 000000055 INF: ===================Move X Motor without settling=================== 15-12-21 21:00:11.213 -05 000000041 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:00:11.220 -05 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:00:11.220 -05 000000055 INF: X Motor: Xmit PR VM\n 15-12-21 21:00:11.220 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:00:11.220 -05 000000056 INF: ===================Move Y Motor without settling=================== 15-12-21 21:00:11.221 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:00:11.221 -05 000000056 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 21:00:11.221 -05 000000056 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:00:11.222 -05 000000089 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:00:11.222 -05 000000089 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:00:11.229 -05 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:00:11.229 -05 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:00:11.229 -05 000000089 INF: ====================================== 15-12-21 21:00:11.229 -05 000000038 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:00:11.229 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:11.235 -05 000000037 INF: ===================Camera Arm TDI=================== 15-12-21 21:00:11.236 -05 000000025 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:00:11.236 -05 000000038 INF: ====================================== 15-12-21 21:00:11.237 -05 000000025 INF: ====================================== 15-12-21 21:00:11.237 -05 000000078 INF: ====================================== 15-12-21 21:00:11.237 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:11.241 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:11.242 -05 000000089 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:00:11.242 -05 000000056 INF: Y Motor: Xmit 1G\n 15-12-21 21:00:11.252 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:00:11.252 -05 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:00:11.258 -05 000000089 INF: ====================================== 15-12-21 21:00:11.258 -05 000000041 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:00:11.258 -05 000000025 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:00:11.258 -05 000000092 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:00:11.262 -05 000000092 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:00:11.262 -05 000000025 INF: ====================================== 15-12-21 21:00:11.262 -05 000000038 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:00:11.263 -05 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:00:11.263 -05 000000038 INF: ====================================== 15-12-21 21:00:11.266 -05 000000078 INF: ====================================== 15-12-21 21:00:11.266 -05 000000041 INF: ====================================== 15-12-21 21:00:11.267 -05 000000056 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:00:11.267 -05 000000061 INF: ====================================== 15-12-21 21:00:11.267 -05 000000086 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:00:11.271 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:11.271 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:11.271 -05 000000056 INF: Y Motor: Recv 1G\r\n 15-12-21 21:00:11.272 -05 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:00:11.274 -05 000000056 INF: Y Motor: Xmit 1D\n 15-12-21 21:00:11.279 -05 000000086 INF: ====================================== 15-12-21 21:00:11.288 -05 000000084 INF: ====================================== 15-12-21 21:00:11.302 -05 000000060 INF: ====================================== 15-12-21 21:00:11.323 -05 000000056 INF: Y Motor: Recv 1D\r\n 15-12-21 21:00:11.323 -05 000000086 INF: FPGA: Recv ZSEL 15-12-21 21:00:11.325 -05 000000056 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:00:11.326 -05 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:00:11.328 -05 000000055 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:00:11.328 -05 000000055 INF: X Motor: Xmit PR VI\n 15-12-21 21:00:11.328 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:11.329 -05 000000056 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:00:11.335 -05 000000092 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:00:11.336 -05 000000092 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:00:11.336 -05 000000092 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:00:11.355 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:11.385 -05 000000089 INF: FPGA: Recv ZSTEP 15-12-21 21:00:11.385 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:11.386 -05 000000055 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:00:11.386 -05 000000055 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:00:11.386 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:11.386 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 21:00:11.386 -05 000000055 INF: X Motor: Moving to 81.0290 mm @15.000 mm/sec, started at 80.2573 mm 15-12-21 21:00:11.386 -05 000000055 INF: X Motor: Xmit MA 9023\n 15-12-21 21:00:11.391 -05 000000082 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104=================== 15-12-21 21:00:11.391 -05 000000034 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104=================== 15-12-21 21:00:11.391 -05 000000044 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104=================== 15-12-21 21:00:11.391 -05 000000072 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105=================== 15-12-21 21:00:11.391 -05 000000031 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106=================== 15-12-21 21:00:11.393 -05 000000027 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1107, Registering and Extracting C025 L002 T1108=================== 15-12-21 21:00:11.393 -05 000000020 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105=================== 15-12-21 21:00:11.393 -05 000000092 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:00:11.395 -05 000000088 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1107=================== 15-12-21 21:00:11.395 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:11.400 -05 000000092 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:00:11.400 -05 000000092 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:00:11.400 -05 000000092 INF: Z Motor: Arming to move to -0.1329 mm 15-12-21 21:00:11.400 -05 000000092 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:00:11.446 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:11.451 -05 000000055 INF: X Motor: Recv MA 9023\r\n> 15-12-21 21:00:11.451 -05 000000055 INF: X Motor: WaitUntilStopped 60051 15-12-21 21:00:11.486 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:00:11.510 -05 000000041 INF: FPGA: Recv ZYT 15-12-21 21:00:11.510 -05 000000092 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907642 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:00:11.510 -05 000000092 INF: FPGA: Xmit ZARM 34830\n 15-12-21 21:00:11.517 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.704C:A1\r\n 15-12-21 21:00:11.517 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:11.604 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 21:00:11.604 -05 000000057 INF: Current Position of Pump is: 18240 15-12-21 21:00:11.604 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:00:11.605 -05 000000060 INF: FPGA: Recv ZARM 15-12-21 21:00:11.605 -05 000000092 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 94.5193 ms 15-12-21 21:00:11.605 -05 000000092 INF: Z Motor: ArmAbsStepped took 203.5193 ms 15-12-21 21:00:11.609 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:11.613 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:11.618 -05 000000092 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:00:11.619 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:11.622 -05 000000092 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:00:11.623 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:11.625 -05 000000092 INF: ====================================== 15-12-21 21:00:11.677 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:11.728 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 21:00:11.732 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:11.732 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:11.821 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:11.873 -05 000000055 INF: X Motor: Xmit PR ER\n 15-12-21 21:00:11.922 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:11.934 -05 000000055 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:00:11.934 -05 000000055 INF: X Motor: Moved to 81.0288 after 483 ms 15-12-21 21:00:11.935 -05 000000055 INF: ====================================== 15-12-21 21:00:12.005 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:12.255 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:12.308 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:12.308 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:12.309 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 21:00:12.309 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:12.371 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:00:12.371 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:12.516 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 21:00:12.557 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:00:12.557 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:12.785 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:12.822 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:00:12.822 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:12.983 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:12.983 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:12.984 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:13.023 -05 000000037 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:00:13.024 -05 000000037 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:00:13.024 -05 000000037 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:00:13.123 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:13.196 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:13.196 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:13.313 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:13.343 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:13.343 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 396ms 15-12-21 21:00:13.408 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:13.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:13.494 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:13.494 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent USB (6)=================== 15-12-21 21:00:13.495 -05 000000057 INF: Valve A2: Go to position 6 15-12-21 21:00:13.495 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 21:00:13.590 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 8\r 15-12-21 21:00:13.590 -05 000000057 INF: Valve A2: 33.493 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:00:13.590 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 8 to 6 15-12-21 21:00:13.590 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC6\r 15-12-21 21:00:13.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:13.591 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 21:00:13.591 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 21:00:13.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:13.731 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:13.798 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 21:00:13.798 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:14.196 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:14.199 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 6\r 15-12-21 21:00:14.200 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:14.200 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 21:00:14.345 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.846C:A1\r\n 15-12-21 21:00:14.345 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:14.452 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:14.522 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:00:14.522 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:14.673 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 21:00:14.713 -05 000000037 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:00:14.714 -05 000000037 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:00:14.714 -05 000000037 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:00:14.716 -05 000000037 INF: ====================================== 15-12-21 21:00:14.722 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:00:14.728 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:00:14.728 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:14.733 -05 000000045 INF: ====================================== 15-12-21 21:00:15.021 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:15.039 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:00:15.039 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:15.039 -05 000000056 INF: Y Motor: Moved to 70.6885 after 3710 ms 15-12-21 21:00:15.040 -05 000000056 INF: ====================================== 15-12-21 21:00:15.042 -05 000000090 INF: ===================Move X,Y=================== 15-12-21 21:00:15.048 -05 000000090 INF: ====================================== 15-12-21 21:00:15.050 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:00:15.054 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:15.058 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:00:15.146 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:15.146 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:15.146 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 21:00:15.147 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:15.161 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:00:15.162 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:15.162 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:15.162 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:00:15.223 -05 000000037 INF: FPGA: Recv ZFREQCL 15-12-21 21:00:15.224 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:00:15.224 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:15.224 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:15.224 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:00:15.235 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 6, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 140, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:00:15.269 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:15.287 -05 000000041 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:00:15.287 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:00:15.288 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:00:15.288 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:00:15.289 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:15.289 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:15.290 -05 000000092 INF: ===================TDI FPGA Arm=================== 15-12-21 21:00:15.290 -05 000000038 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:00:15.290 -05 000000038 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:00:15.301 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:00:15.302 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:00:15.302 -05 000000092 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:00:15.324 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:00:15.348 -05 000000055 INF: FPGA: Recv TDIYPOS 15-12-21 21:00:15.349 -05 000000038 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:00:15.349 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:00:15.350 -05 000000038 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:00:15.350 -05 000000038 INF: ====================================== 15-12-21 21:00:15.356 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:00:15.361 -05 000000092 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:00:15.449 -05 000000045 INF: FPGA: Recv TDIYARM3 15-12-21 21:00:15.452 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 21:00:15.452 -05 000000057 INF: Current Position of Pump is: 18240 15-12-21 21:00:15.453 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6), Aspirating port PortB=================== 15-12-21 21:00:15.454 -05 000000092 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:00:15.456 -05 000000092 INF: ===================TDI FPGA Arm=================== 15-12-21 21:00:15.459 -05 000000092 INF: ====================================== 15-12-21 21:00:15.461 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:00:15.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:15.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:15.466 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:15.468 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:15.470 -05 000000025 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:00:15.470 -05 000000025 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:00:15.470 -05 000000025 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:00:15.470 -05 000000025 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:00:15.470 -05 000000025 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:00:15.472 -05 000000056 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:00:15.472 -05 000000056 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:00:15.472 -05 000000056 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:00:15.472 -05 000000056 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:00:15.486 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:15.488 -05 000000056 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:00:15.556 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P26880R\r 15-12-21 21:00:15.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:15.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:15.634 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:15.660 -05 000000041 INF: FPGA: Recv EX1MV 15-12-21 21:00:15.660 -05 000000056 INF: Excitation Filter 1: Moved -36 steps in 187.5616 ms 15-12-21 21:00:15.660 -05 000000056 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 187.7244 ms 15-12-21 21:00:15.660 -05 000000056 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 187.8708 ms 15-12-21 21:00:15.661 -05 000000056 INF: ====================================== 15-12-21 21:00:15.734 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:15.816 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:15.910 -05 000000089 INF: FPGA: Recv EX2MV 15-12-21 21:00:15.910 -05 000000025 INF: Excitation Filter 2: Moved -107 steps in 439.8186 ms 15-12-21 21:00:15.910 -05 000000025 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 439.9935 ms 15-12-21 21:00:15.910 -05 000000025 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 440.0888 ms 15-12-21 21:00:15.911 -05 000000025 INF: ====================================== 15-12-21 21:00:15.917 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:15.919 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:15.926 -05 000000090 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:00:15.926 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 21:00:15.926 -05 000000038 INF: ===================FPGA Z Wait=================== 15-12-21 21:00:15.931 -05 000000041 INF: ===================Move Y Motor without settling=================== 15-12-21 21:00:15.931 -05 000000041 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:00:15.931 -05 000000041 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:00:15.931 -05 000000090 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:00:15.931 -05 000000038 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:00:15.936 -05 000000041 INF: Y Motor: Xmit 1G\n 15-12-21 21:00:15.940 -05 000000037 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:00:15.946 -05 000000090 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:00:15.950 -05 000000061 INF: ===================Camera TDI=================== 15-12-21 21:00:15.954 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:00:15.988 -05 000000041 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:00:15.989 -05 000000041 INF: Y Motor: Recv 1G\r\n 15-12-21 21:00:15.990 -05 000000041 INF: Y Motor: Xmit 1D\n 15-12-21 21:00:16.034 -05 000000041 INF: Y Motor: Recv 1D\r\n 15-12-21 21:00:16.035 -05 000000041 INF: Y Motor: Recv *407662\r\n 15-12-21 21:00:16.036 -05 000000041 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:00:16.066 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:16.131 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:16.226 -05 000000056 INF: FPGA: Recv ZWAIT 15-12-21 21:00:16.227 -05 000000038 INF: ====================================== 15-12-21 21:00:16.394 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:16.422 -05 000000061 INF: ===================Frame #3=================== 15-12-21 21:00:16.454 -05 000000078 INF: ===================Frame #4=================== 15-12-21 21:00:16.455 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:16.573 -05 000000061 INF: ===================Frame #15=================== 15-12-21 21:00:16.633 -05 000000078 INF: ===================Frame #20=================== 15-12-21 21:00:16.681 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:16.705 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:16.708 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.617C:A1\r\n 15-12-21 21:00:16.708 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:16.725 -05 000000061 INF: ===================Frame #27=================== 15-12-21 21:00:16.809 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:16.849 -05 000000020 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1107=================== 15-12-21 21:00:16.877 -05 000000061 INF: ===================Frame #39=================== 15-12-21 21:00:16.882 -05 000000051 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1107, Registering and Extracting C025 L002 T1109=================== 15-12-21 21:00:17.027 -05 000000061 INF: ===================Frame #51=================== 15-12-21 21:00:17.042 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:17.072 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:17.073 -05 000000078 INF: ===================Frame #55=================== 15-12-21 21:00:17.110 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:17.111 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:17.111 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:17.178 -05 000000061 INF: ===================Frame #63=================== 15-12-21 21:00:17.217 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:17.223 -05 000000078 INF: ===================Frame #66=================== 15-12-21 21:00:17.223 -05 000000044 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1107=================== 15-12-21 21:00:17.237 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:17.237 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:17.271 -05 000000082 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106=================== 15-12-21 21:00:17.281 -05 000000048 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1110, Registering and Extracting C025 L002 T1111=================== 15-12-21 21:00:17.282 -05 000000009 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1110, Registering and Extracting C025 L002 T1111=================== 15-12-21 21:00:17.329 -05 000000061 INF: ===================Frame #75=================== 15-12-21 21:00:17.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:17.360 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:17.363 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:17.363 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:17.423 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:17.480 -05 000000061 INF: ===================Frame #87=================== 15-12-21 21:00:17.495 -05 000000078 INF: ===================Frame #88=================== 15-12-21 21:00:17.630 -05 000000061 INF: ===================Frame #99=================== 15-12-21 21:00:17.673 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:17.701 -05 000000078 INF: ===================Frame #104=================== 15-12-21 21:00:17.734 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:17.781 -05 000000061 INF: ===================Frame #111=================== 15-12-21 21:00:17.800 -05 000000034 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1110=================== 15-12-21 21:00:17.882 -05 000000028 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1110, Registering and Extracting C025 L002 T1112=================== 15-12-21 21:00:17.929 -05 000000072 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1110=================== 15-12-21 21:00:17.932 -05 000000061 INF: ===================Frame #122=================== 15-12-21 21:00:17.941 -05 000000078 INF: ===================Frame #123=================== 15-12-21 21:00:17.982 -05 000000063 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1110, Registering and Extracting C025 L002 T1113=================== 15-12-21 21:00:17.984 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:18.004 -05 000000088 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106, Registering and Extracting C025 L002 T1110=================== 15-12-21 21:00:18.005 -05 000000027 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1106=================== 15-12-21 21:00:18.005 -05 000000031 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105=================== 15-12-21 21:00:18.048 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:18.082 -05 000000079 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1114, Registering and Extracting C025 L002 T1115, Registering and Extracting C025 L002 T1116=================== 15-12-21 21:00:18.082 -05 000000054 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1114, Registering and Extracting C025 L002 T1115, Registering and Extracting C025 L002 T1116=================== 15-12-21 21:00:18.082 -05 000000068 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1114, Registering and Extracting C025 L002 T1115, Registering and Extracting C025 L002 T1116=================== 15-12-21 21:00:18.092 -05 000000078 INF: ===================Frame #135=================== 15-12-21 21:00:18.243 -05 000000078 INF: ===================Frame #147=================== 15-12-21 21:00:18.298 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:18.359 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:18.401 -05 000000078 INF: ===================Frame #159=================== 15-12-21 21:00:18.553 -05 000000078 INF: ===================Frame #172=================== 15-12-21 21:00:18.600 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:18.609 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:18.671 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:18.672 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:18.672 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:18.747 -05 000000061 INF: ===================Frame #187=================== 15-12-21 21:00:18.773 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:18.799 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:18.799 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:18.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:18.898 -05 000000061 INF: ===================Frame #199=================== 15-12-21 21:00:18.921 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:18.923 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:18.923 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:18.984 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:19.056 -05 000000061 INF: ===================Frame #211=================== 15-12-21 21:00:19.085 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:19.111 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 21:00:19.111 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:19.206 -05 000000061 INF: ===================Frame #223=================== 15-12-21 21:00:19.216 -05 000000078 INF: ===================Frame #224=================== 15-12-21 21:00:19.234 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:19.313 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:19.358 -05 000000061 INF: ===================Frame #235=================== 15-12-21 21:00:19.452 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:19.508 -05 000000061 INF: ===================Frame #247=================== 15-12-21 21:00:19.514 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.842C:A1\r\n 15-12-21 21:00:19.514 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:19.613 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:19.665 -05 000000061 INF: ===================Frame #260=================== 15-12-21 21:00:19.670 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:19.915 -05 000000078 INF: ===================Frame #279=================== 15-12-21 21:00:19.920 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:19.993 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:20.073 -05 000000078 INF: ===================Frame #292=================== 15-12-21 21:00:20.226 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:20.243 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:20.295 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:20.295 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:20.295 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:20.411 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:20.420 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:20.420 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:20.553 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:20.599 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:20.606 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:20.669 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:20.669 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:20.856 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:20.889 -05 000000051 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1114, Registering and Extracting C025 L002 T1115=================== 15-12-21 21:00:20.917 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:20.929 -05 000000078 INF: ===================Frame #360=================== 15-12-21 21:00:20.991 -05 000000061 INF: ===================Frame #364=================== 15-12-21 21:00:21.167 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:21.234 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:21.355 -05 000000078 INF: ===================Frame #393=================== 15-12-21 21:00:21.469 -05 000000009 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105, Registering and Extracting C025 L002 T1114=================== 15-12-21 21:00:21.485 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:21.509 -05 000000078 INF: ===================Frame #405=================== 15-12-21 21:00:21.535 -05 000000048 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104, Registering and Extracting C025 L002 T1105=================== 15-12-21 21:00:21.542 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:21.572 -05 000000061 INF: ===================Frame #410=================== 15-12-21 21:00:21.661 -05 000000078 INF: ===================Frame #417=================== 15-12-21 21:00:21.792 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:21.812 -05 000000078 INF: ===================Frame #429=================== 15-12-21 21:00:21.829 -05 000000061 INF: ===================Frame #431=================== 15-12-21 21:00:21.855 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:21.855 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 21:00:21.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:21.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:21.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:21.956 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:00:21.964 -05 000000078 INF: ===================Frame #441=================== 15-12-21 21:00:21.980 -05 000000061 INF: ===================Frame #442=================== 15-12-21 21:00:22.029 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:22.043 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 21:00:22.043 -05 000000057 INF: Current Position of Pump is: 45120 15-12-21 21:00:22.043 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:00:22.106 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.824C:A1\r\n 15-12-21 21:00:22.106 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:22.119 -05 000000078 INF: ===================Frame #453=================== 15-12-21 21:00:22.143 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 21:00:22.210 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:22.236 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:22.237 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:22.237 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:22.255 -05 000000061 INF: ===================Frame #464=================== 15-12-21 21:00:22.269 -05 000000078 INF: ===================Frame #465=================== 15-12-21 21:00:22.336 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:22.349 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:22.417 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:22.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:22.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:22.419 -05 000000078 INF: ===================Frame #477=================== 15-12-21 21:00:22.479 -05 000000061 INF: ===================Frame #482=================== 15-12-21 21:00:22.570 -05 000000078 INF: ===================Frame #489=================== 15-12-21 21:00:22.668 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:22.668 -05 000000061 INF: ===================Frame #497=================== 15-12-21 21:00:22.721 -05 000000078 INF: ===================Frame #501=================== 15-12-21 21:00:22.745 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:22.745 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:22.746 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 21:00:22.746 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:22.807 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:00:22.807 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:23.421 -05 000000061 INF: ===================Frame #509=================== 15-12-21 21:00:23.421 -05 000000078 INF: ===================Frame #513=================== 15-12-21 21:00:23.572 -05 000000028 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103, Registering and Extracting C025 L002 T1104=================== 15-12-21 21:00:23.572 -05 000000078 INF: ===================Frame #568=================== 15-12-21 21:00:23.572 -05 000000061 INF: ===================Frame #568=================== 15-12-21 21:00:23.579 -05 000000063 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102, Registering and Extracting C025 L002 T1103=================== 15-12-21 21:00:23.813 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:23.837 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:00:23.838 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:23.909 -05 000000061 INF: ===================Frame #595=================== 15-12-21 21:00:23.938 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:23.939 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:23.939 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:23.940 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:00:23.940 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle=================== 15-12-21 21:00:23.948 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:23.949 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:23.951 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:00:23.951 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:23.981 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:23.982 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:24.019 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:24.021 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Selecting Reagent IMT (1)=================== 15-12-21 21:00:24.021 -05 000000057 INF: Valve A2: Go to position 1 15-12-21 21:00:24.025 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 21:00:24.060 -05 000000061 INF: ===================Frame #607=================== 15-12-21 21:00:24.062 -05 000000078 INF: ===================Frame #607=================== 15-12-21 21:00:24.071 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 6\r 15-12-21 21:00:24.071 -05 000000057 INF: Valve A2: 10.480 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:00:24.071 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 6 to 1 15-12-21 21:00:24.071 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC1\r 15-12-21 21:00:24.072 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 21:00:24.072 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 21:00:24.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:24.179 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:24.179 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:24.204 -05 000000079 INF: ===================Registering and Extracting C025 L002 T1101, Registering and Extracting C025 L002 T1102=================== 15-12-21 21:00:24.218 -05 000000061 INF: ===================Frame #619=================== 15-12-21 21:00:24.220 -05 000000078 INF: ===================Frame #619=================== 15-12-21 21:00:24.386 -05 000000061 INF: ===================Frame #631=================== 15-12-21 21:00:24.387 -05 000000078 INF: ===================Frame #631=================== 15-12-21 21:00:24.387 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:24.543 -05 000000078 INF: ===================Frame #645=================== 15-12-21 21:00:24.543 -05 000000061 INF: ===================Frame #645=================== 15-12-21 21:00:24.547 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 21:00:24.547 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:24.665 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:24.694 -05 000000078 INF: ===================Frame #657=================== 15-12-21 21:00:24.695 -05 000000061 INF: ===================Frame #657=================== 15-12-21 21:00:24.727 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:24.727 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:24.836 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:24.845 -05 000000061 INF: ===================Frame #669=================== 15-12-21 21:00:24.847 -05 000000078 INF: ===================Frame #669=================== 15-12-21 21:00:24.850 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.905C:A1\r\n 15-12-21 21:00:24.850 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:24.933 -05 000000054 INF: ===================Registering and Extracting C025 L002 T1101=================== 15-12-21 21:00:24.997 -05 000000061 INF: ===================Frame #681=================== 15-12-21 21:00:24.998 -05 000000078 INF: ===================Frame #681=================== 15-12-21 21:00:25.113 -05 000000068 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:00:25.116 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:25.124 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:00:25.148 -05 000000078 INF: ===================Frame #693=================== 15-12-21 21:00:25.148 -05 000000061 INF: ===================Frame #693=================== 15-12-21 21:00:25.162 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 1\r 15-12-21 21:00:25.162 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:25.162 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 21:00:25.162 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:25.224 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:00:25.224 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:25.301 -05 000000061 INF: ===================Frame #705=================== 15-12-21 21:00:25.302 -05 000000078 INF: ===================Frame #705=================== 15-12-21 21:00:25.328 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 21:00:25.351 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:00:25.351 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:25.411 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:25.419 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:00:25.452 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:25.452 -05 000000078 INF: ===================Frame #717=================== 15-12-21 21:00:25.452 -05 000000061 INF: ===================Frame #717=================== 15-12-21 21:00:25.476 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:00:25.476 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:25.581 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:25.581 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 21:00:25.581 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:25.602 -05 000000078 INF: ===================Frame #729=================== 15-12-21 21:00:25.602 -05 000000061 INF: ===================Frame #729=================== 15-12-21 21:00:25.652 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:25.659 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:00:25.660 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:25.669 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:00:25.755 -05 000000061 INF: ===================Frame #741=================== 15-12-21 21:00:25.756 -05 000000078 INF: ===================Frame #741=================== 15-12-21 21:00:25.760 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:00:25.768 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:25.774 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:00:25.847 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 21:00:25.847 -05 000000057 INF: Current Position of Pump is: 45120 15-12-21 21:00:25.847 -05 000000057 INF: Dispensing because using MultiAspirate and syringe is full 15-12-21 21:00:25.895 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:25.906 -05 000000078 INF: ===================Frame #753=================== 15-12-21 21:00:25.906 -05 000000061 INF: ===================Frame #753=================== 15-12-21 21:00:25.947 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 15-12-21 21:00:25.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:25.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:25.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:26.035 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:26.057 -05 000000078 INF: ===================Frame #765=================== 15-12-21 21:00:26.057 -05 000000061 INF: ===================Frame #765=================== 15-12-21 21:00:26.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:26.098 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:26.098 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:26.135 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:26.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:26.207 -05 000000061 INF: ===================Frame #777=================== 15-12-21 21:00:26.208 -05 000000078 INF: ===================Frame #777=================== 15-12-21 21:00:26.223 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:26.286 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:26.286 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:26.358 -05 000000061 INF: ===================Frame #789=================== 15-12-21 21:00:26.358 -05 000000078 INF: ===================Frame #789=================== 15-12-21 21:00:26.473 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:26.508 -05 000000061 INF: ===================Frame #801=================== 15-12-21 21:00:26.508 -05 000000078 INF: ===================Frame #800=================== 15-12-21 21:00:26.534 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:26.634 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 15-12-21 21:00:26.658 -05 000000061 INF: ===================Frame #812=================== 15-12-21 21:00:26.722 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:26.822 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:26.910 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:27.162 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:27.210 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:27.221 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:27.222 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.013C:A1\r\n 15-12-21 21:00:27.222 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:27.387 -05 000000078 INF: ===================Frame #870=================== 15-12-21 21:00:27.471 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:27.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:27.533 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:27.569 -05 000000061 INF: ===================Frame #884=================== 15-12-21 21:00:27.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:27.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:27.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:27.722 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:27.722 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:27.789 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:27.803 -05 000000078 INF: ===================Frame #903=================== 15-12-21 21:00:27.812 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 21:00:27.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:27.845 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:27.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:27.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:27.950 -05 000000061 INF: ===================Frame #915=================== 15-12-21 21:00:27.953 -05 000000078 INF: ===================Frame #915=================== 15-12-21 21:00:28.095 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:28.100 -05 000000061 INF: ===================Frame #926=================== 15-12-21 21:00:28.103 -05 000000078 INF: ===================Frame #927=================== 15-12-21 21:00:28.156 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:28.253 -05 000000078 INF: ===================Frame #938=================== 15-12-21 21:00:28.313 -05 000000061 INF: ===================Frame #943=================== 15-12-21 21:00:28.406 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:28.463 -05 000000061 INF: ===================Frame #955=================== 15-12-21 21:00:28.470 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:28.498 -05 000000078 INF: ===================Frame #958=================== 15-12-21 21:00:28.614 -05 000000061 INF: ===================Frame #967=================== 15-12-21 21:00:28.671 -05 000000078 INF: ===================Frame #972=================== 15-12-21 21:00:28.720 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:28.764 -05 000000061 INF: ===================Frame #979=================== 15-12-21 21:00:28.781 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:28.836 -05 000000078 INF: ===================Frame #985=================== 15-12-21 21:00:28.915 -05 000000061 INF: ===================Frame #991=================== 15-12-21 21:00:28.986 -05 000000078 INF: ===================Frame #996=================== 15-12-21 21:00:29.031 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:29.065 -05 000000061 INF: ===================Frame #1003=================== 15-12-21 21:00:29.073 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:29.092 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:29.093 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:29.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:29.167 -05 000000078 INF: ===================Frame #1011=================== 15-12-21 21:00:29.203 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:29.215 -05 000000061 INF: ===================Frame #1015=================== 15-12-21 21:00:29.219 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:29.219 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:29.317 -05 000000078 INF: ===================Frame #1023=================== 15-12-21 21:00:29.324 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:29.342 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:29.365 -05 000000061 INF: ===================Frame #1026=================== 15-12-21 21:00:29.406 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:29.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:29.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:29.467 -05 000000078 INF: ===================Frame #1034=================== 15-12-21 21:00:29.656 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:29.665 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:29.699 -05 000000061 INF: ===================Frame #1053=================== 15-12-21 21:00:29.717 -05 000000078 INF: ===================Frame #1054=================== 15-12-21 21:00:29.718 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:29.719 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 21:00:29.719 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:29.849 -05 000000061 INF: ===================Frame #1065=================== 15-12-21 21:00:29.905 -05 000000078 INF: ===================Frame #1069=================== 15-12-21 21:00:29.958 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:29.968 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:29.968 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.939C:A1\r\n 15-12-21 21:00:29.968 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:29.999 -05 000000061 INF: ===================Frame #1077=================== 15-12-21 21:00:30.029 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:30.056 -05 000000078 INF: ===================Frame #1081=================== 15-12-21 21:00:30.149 -05 000000061 INF: ===================Frame #1088=================== 15-12-21 21:00:30.206 -05 000000078 INF: ===================Frame #1093=================== 15-12-21 21:00:30.279 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:30.340 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:30.356 -05 000000078 INF: ===================Frame #1105=================== 15-12-21 21:00:30.372 -05 000000061 INF: ===================Frame #1106=================== 15-12-21 21:00:30.506 -05 000000078 INF: ===================Frame #1117=================== 15-12-21 21:00:30.546 -05 000000061 INF: ===================Frame #1120=================== 15-12-21 21:00:30.590 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:30.631 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:30.652 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:30.653 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:30.653 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:30.657 -05 000000078 INF: ===================Frame #1129=================== 15-12-21 21:00:30.720 -05 000000061 INF: ===================Frame #1134=================== 15-12-21 21:00:30.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:30.779 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:30.779 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:30.808 -05 000000078 INF: ===================Frame #1140=================== 15-12-21 21:00:30.883 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:30.892 -05 000000061 INF: ===================Frame #1147=================== 15-12-21 21:00:30.902 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:30.902 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:30.902 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:30.966 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:31.043 -05 000000061 INF: ===================Frame #1159=================== 15-12-21 21:00:31.109 -05 000000078 INF: ===================Frame #1164=================== 15-12-21 21:00:31.193 -05 000000061 INF: ===================Frame #1171=================== 15-12-21 21:00:31.216 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:31.277 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:31.277 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 21:00:31.292 -05 000000078 INF: ===================Frame #1179=================== 15-12-21 21:00:31.343 -05 000000061 INF: ===================Frame #1183=================== 15-12-21 21:00:31.378 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P21120R\r 15-12-21 21:00:31.443 -05 000000078 INF: ===================Frame #1191=================== 15-12-21 21:00:31.464 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:31.494 -05 000000061 INF: ===================Frame #1195=================== 15-12-21 21:00:31.564 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:31.590 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:31.593 -05 000000078 INF: ===================Frame #1202=================== 15-12-21 21:00:31.644 -05 000000061 INF: ===================Frame #1206=================== 15-12-21 21:00:31.794 -05 000000078 INF: ===================Frame #1218=================== 15-12-21 21:00:31.840 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:31.885 -05 000000061 INF: ===================Frame #1226=================== 15-12-21 21:00:31.903 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:31.968 -05 000000078 INF: ===================Frame #1232=================== 15-12-21 21:00:32.082 -05 000000061 INF: ===================Frame #1241=================== 15-12-21 21:00:32.133 -05 000000078 INF: ===================Frame #1245=================== 15-12-21 21:00:32.135 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:32.153 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:32.153 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:32.153 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:32.213 -05 000000045 INF: FPGA: Recv TDIYWAIT 15-12-21 21:00:32.214 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:32.214 -05 000000090 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:00:32.217 -05 000000090 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:00:32.218 -05 000000023 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:00:32.218 -05 000000023 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:00:32.219 -05 000000023 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:00:32.219 -05 000000023 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:00:32.219 -05 000000089 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:00:32.219 -05 000000023 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:00:32.219 -05 000000089 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:00:32.219 -05 000000089 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:00:32.219 -05 000000089 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:00:32.225 -05 000000089 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:00:32.232 -05 000000061 INF: ===================Frame #1250=================== 15-12-21 21:00:32.265 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:32.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:32.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:32.283 -05 000000078 INF: ===================Frame #1250=================== 15-12-21 21:00:32.287 -05 000000061 INF: Camera complete - got 1250 frames. 15-12-21 21:00:32.289 -05 000000061 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:00:32.320 -05 000000078 INF: Camera complete - got 1250 frames. 15-12-21 21:00:32.321 -05 000000078 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:00:32.381 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:32.399 -05 000000084 INF: FPGA: Recv EX1MV 15-12-21 21:00:32.399 -05 000000089 INF: Excitation Filter 1: Moved 36 steps in 180.0126 ms 15-12-21 21:00:32.399 -05 000000089 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 180.1431 ms 15-12-21 21:00:32.399 -05 000000089 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 180.2419 ms 15-12-21 21:00:32.400 -05 000000089 INF: ====================================== 15-12-21 21:00:32.401 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.385C:A1\r\n 15-12-21 21:00:32.401 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:32.464 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:32.507 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:32.525 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:32.588 -05 000000029 INF: FPGA: Recv EX2MV 15-12-21 21:00:32.588 -05 000000023 INF: Excitation Filter 2: Moved 107 steps in 369.3816 ms 15-12-21 21:00:32.588 -05 000000023 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.5195 ms 15-12-21 21:00:32.588 -05 000000023 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.5958 ms 15-12-21 21:00:32.589 -05 000000023 INF: ====================================== 15-12-21 21:00:32.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:32.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:32.597 -05 000000090 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:00:32.600 -05 000000090 INF: ====================================== 15-12-21 21:00:32.676 -05 000000061 INF: ===================Camera TDI=================== 15-12-21 21:00:32.707 -05 000000061 INF: ====================================== 15-12-21 21:00:32.761 -05 000000041 INF: Y Motor: Moved to 9.0765 after 16723 ms 15-12-21 21:00:32.763 -05 000000041 INF: ====================================== 15-12-21 21:00:32.775 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:32.840 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:32.871 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:00:32.895 -05 000000078 INF: ====================================== 15-12-21 21:00:32.897 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 21:00:32.901 -05 000000037 INF: ====================================== 15-12-21 21:00:32.904 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:32.906 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:32.908 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:32.909 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:00:32.996 -05 000000040 INF: FPGA: Recv TDICLINES 10079 15-12-21 21:00:32.996 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:00:33.061 -05 000000040 INF: FPGA: Recv TDIYERD 907648 15-12-21 21:00:33.087 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 21:00:33.106 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:33.135 -05 000000055 INF: FPGA: Recv ZADCR 38864 15-12-21 21:00:33.145 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.148. Y moved -60.304 mm 15-12-21 21:00:33.157 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:00:33.195 -05 000000041 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:00:33.195 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:00:33.195 -05 000000062 INF: TDIScan finished after 22021.3352 ms 15-12-21 21:00:33.195 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:00:33.195 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:00:33.196 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:33.199 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:33.232 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.252 um 15-12-21 21:00:33.232 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:33.235 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:33.236 -05 000000078 INF: ===================Dither Clean Up Command=================== 15-12-21 21:00:33.236 -05 000000040 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:00:33.237 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:00:33.237 -05 000000040 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:00:33.237 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:00:33.237 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:00:33.238 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:33.238 -05 000000045 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:00:33.238 -05 000000041 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:00:33.239 -05 000000045 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:00:33.239 -05 000000025 INF: ===================LFT:Extracting coords=================== 15-12-21 21:00:33.256 -05 000000086 INF: FPGA: Recv ZSTEP 15-12-21 21:00:33.256 -05 000000086 INF: FPGA: Recv ZSEL 15-12-21 21:00:33.256 -05 000000045 INF: FPGA: Xmit ZDACW 45316\n 15-12-21 21:00:33.257 -05 000000055 INF: ====================================== 15-12-21 21:00:33.291 -05 000000040 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:00:33.292 -05 000000040 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:00:33.292 -05 000000041 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:00:33.293 -05 000000040 INF: ====================================== 15-12-21 21:00:33.294 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:33.295 -05 000000025 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:00:33.296 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:33.296 -05 000000084 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:33.296 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:33.297 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:33.297 -05 000000084 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:33.297 -05 000000092 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:33.300 -05 000000060 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:33.300 -05 000000060 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:33.353 -05 000000040 INF: FPGA: Recv ZDACW 15-12-21 21:00:33.356 -05 000000045 INF: ====================================== 15-12-21 21:00:33.384 -05 000000041 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:00:33.387 -05 000000041 INF: ====================================== 15-12-21 21:00:33.446 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:33.476 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:33.486 -05 000000092 INF: LFT found best fwhm score 2.582754 in 128 ms 15-12-21 21:00:33.486 -05 000000092 INF: LFT found good score at index 1413 with fwhm value 2.582754. Next cycle, cycle 26 starting Z position for top surface is at -0.176 mm FC:B, C:25,L:2,T 15-12-21 21:00:33.486 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:33.487 -05 000000092 INF: ====================================== 15-12-21 21:00:33.488 -05 000000084 INF: LFT found best fwhm score 2.331607 in 130 ms 15-12-21 21:00:33.488 -05 000000084 INF: LFT found good score at index 2225 with fwhm value 2.331607. Next cycle, cycle 26 starting Z position for top surface is at -0.175 mm FC:B, C:25,L:2,T 15-12-21 21:00:33.488 -05 000000084 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:33.492 -05 000000084 INF: ====================================== 15-12-21 21:00:33.543 -05 000000060 INF: LFT found best fwhm score 2.675841 in 181 ms 15-12-21 21:00:33.543 -05 000000060 INF: LFT found good score at index 2837 with fwhm value 2.675841. Next cycle, cycle 26 starting Z position for top surface is at -0.175 mm FC:B, C:25,L:2,T 15-12-21 21:00:33.544 -05 000000060 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:33.545 -05 000000060 INF: ====================================== 15-12-21 21:00:33.546 -05 000000037 INF: LFT found best fwhm score 2.608166 in 188 ms 15-12-21 21:00:33.546 -05 000000037 INF: LFT found good score at index 8469 with fwhm value 2.608166. Next cycle, cycle 26 starting Z position for top surface is at -0.174 mm FC:B, C:25,L:2,T 15-12-21 21:00:33.546 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:33.546 -05 000000037 INF: ====================================== 15-12-21 21:00:33.549 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:33.552 -05 000000025 INF: LFT weighted average best Z for top surface is at -0.175mm FC:B, C:25,L:2,T 15-12-21 21:00:33.552 -05 000000025 INF: ====================================== 15-12-21 21:00:33.555 -05 000000078 INF: ====================================== 15-12-21 21:00:33.558 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:33.560 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:00:33.560 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:33.561 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:00:33.561 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:33.561 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:00:33.561 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:33.562 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:00:33.562 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:33.562 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:00:33.563 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:00:33.566 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 21:00:33.566 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 21:00:33.567 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:00:33.567 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:00:33.567 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:00:33.567 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 21:00:33.568 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:33.568 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 21:00:33.569 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:00:33.570 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface, Lane 2=================== 15-12-21 21:00:33.570 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Top Surface=================== 15-12-21 21:00:33.570 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging=================== 15-12-21 21:00:33.571 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface=================== 15-12-21 21:00:33.571 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface=================== 15-12-21 21:00:33.571 -05 000000062 INF: Compensator: Moving OutOfPath 15-12-21 21:00:33.571 -05 000000062 INF: FPGA: Xmit MIOCOMPR\n 15-12-21 21:00:33.726 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:33.777 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:33.821 -05 000000054 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203=================== 15-12-21 21:00:33.821 -05 000000068 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203=================== 15-12-21 21:00:33.821 -05 000000028 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205=================== 15-12-21 21:00:33.822 -05 000000009 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206=================== 15-12-21 21:00:33.822 -05 000000079 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204=================== 15-12-21 21:00:33.823 -05 000000051 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206, Registering and Extracting C025 L002 T1207, Registering and Extracting C025 L002 T1208=================== 15-12-21 21:00:33.823 -05 000000048 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206, Registering and Extracting C025 L002 T1207, Registering and Extracting C025 L002 T1208=================== 15-12-21 21:00:33.823 -05 000000063 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204=================== 15-12-21 21:00:33.843 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:33.869 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:33.869 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:33.970 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:33.971 -05 000000056 INF: FPGA: Recv MIOCOMPR 15-12-21 21:00:33.972 -05 000000062 INF: Compensator: Moved OutOfPath in 400 ms 15-12-21 21:00:33.972 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface=================== 15-12-21 21:00:33.998 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:34.001 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:34.032 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:34.033 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:00:34.034 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:00:34.035 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:00:34.039 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:00:34.041 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:00:34.041 -05 000000062 INF: Compensator: Remaining OutOfPath 15-12-21 21:00:34.042 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:00:34.043 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:00:34.064 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 21:00:34.065 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 21:00:34.102 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:34.109 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:34.114 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:00:34.114 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:34.114 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -172.9 um, section = A_1 15-12-21 21:00:34.117 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:00:34.119 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:00:34.137 -05 000000037 INF: ===================MoveEmissionFilters=================== 15-12-21 21:00:34.137 -05 000000025 INF: ===================Move X,Y=================== 15-12-21 21:00:34.139 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:00:34.141 -05 000000060 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:00:34.141 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:00:34.144 -05 000000092 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:00:34.144 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:00:34.149 -05 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:00:34.149 -05 000000025 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:00:34.153 -05 000000078 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:00:34.153 -05 000000060 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:00:34.153 -05 000000078 INF: Z Motor: Moving to -0.1212 mm, started at -0.1729 mm 15-12-21 21:00:34.153 -05 000000078 INF: FPGA: Xmit ZTRG 0\n 15-12-21 21:00:34.153 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:00:34.158 -05 000000086 INF: ===================Move X Motor without settling=================== 15-12-21 21:00:34.158 -05 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:00:34.159 -05 000000086 INF: X Motor: Xmit PR VM\n 15-12-21 21:00:34.159 -05 000000061 INF: ===================Move Y Motor without settling=================== 15-12-21 21:00:34.159 -05 000000090 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:00:34.159 -05 000000061 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 21:00:34.160 -05 000000089 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:00:34.160 -05 000000092 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:00:34.160 -05 000000090 INF: ====================================== 15-12-21 21:00:34.161 -05 000000056 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:00:34.161 -05 000000084 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:00:34.161 -05 000000089 INF: ====================================== 15-12-21 21:00:34.161 -05 000000056 INF: ====================================== 15-12-21 21:00:34.161 -05 000000055 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:00:34.162 -05 000000055 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:00:34.162 -05 000000061 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:00:34.162 -05 000000055 INF: ====================================== 15-12-21 21:00:34.163 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:00:34.163 -05 000000084 INF: ====================================== 15-12-21 21:00:34.165 -05 000000090 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:00:34.165 -05 000000060 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:00:34.165 -05 000000090 INF: ====================================== 15-12-21 21:00:34.165 -05 000000023 INF: ====================================== 15-12-21 21:00:34.166 -05 000000041 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:00:34.170 -05 000000041 INF: ====================================== 15-12-21 21:00:34.176 -05 000000061 INF: Y Motor: Xmit 1G\n 15-12-21 21:00:34.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:34.177 -05 000000060 INF: ====================================== 15-12-21 21:00:34.207 -05 000000056 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:00:34.211 -05 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:00:34.212 -05 000000061 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:00:34.212 -05 000000056 INF: ====================================== 15-12-21 21:00:34.215 -05 000000086 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:00:34.215 -05 000000086 INF: X Motor: Xmit PR VI\n 15-12-21 21:00:34.218 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:34.218 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:34.222 -05 000000040 INF: ====================================== 15-12-21 21:00:34.225 -05 000000092 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:00:34.236 -05 000000092 INF: ====================================== 15-12-21 21:00:34.242 -05 000000037 INF: ====================================== 15-12-21 21:00:34.257 -05 000000041 INF: FPGA: Recv ZTRG 15-12-21 21:00:34.257 -05 000000078 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 21:00:34.273 -05 000000061 INF: Y Motor: Recv 1G\r\n 15-12-21 21:00:34.276 -05 000000086 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:00:34.276 -05 000000086 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:00:34.276 -05 000000086 INF: X Motor: Moving to 75.9620 mm @15.000 mm/sec, started at 81.0288 mm 15-12-21 21:00:34.276 -05 000000061 INF: Y Motor: Xmit 1D\n 15-12-21 21:00:34.279 -05 000000086 INF: X Motor: Xmit MA 6948\n 15-12-21 21:00:34.319 -05 000000060 INF: FPGA: Recv ZYT 15-12-21 21:00:34.319 -05 000000078 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 21:00:34.319 -05 000000078 INF: FPGA: Xmit ZMV 31778\n 15-12-21 21:00:34.335 -05 000000061 INF: Y Motor: Recv 1D\r\n 15-12-21 21:00:34.336 -05 000000061 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:00:34.336 -05 000000086 INF: X Motor: Recv MA 6948\r\n> 15-12-21 21:00:34.336 -05 000000086 INF: X Motor: WaitUntilStopped 60338 15-12-21 21:00:34.337 -05 000000061 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:00:34.355 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:34.402 -05 000000084 INF: FPGA: Recv ZMV 15-12-21 21:00:34.402 -05 000000078 INF: Z Motor: MoveAndTrigger 'ZMV' command took 83.319 ms 15-12-21 21:00:34.402 -05 000000078 INF: FPGA: Xmit ZDACR\n 15-12-21 21:00:34.459 -05 000000023 INF: FPGA: Recv ZDACR 31778 15-12-21 21:00:34.459 -05 000000078 INF: Z Motor: MoveAndTrigger took 306.742 ms w/comms 15-12-21 21:00:34.460 -05 000000078 INF: Z Motor: After move to -0.1212, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:00:34.460 -05 000000078 INF: Z Motor: MoveAbsStepped took 306.8885 ms 15-12-21 21:00:34.460 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:34.460 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:00:34.464 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:00:34.493 -05 000000037 INF: ===================Camera Arm TDI=================== 15-12-21 21:00:34.508 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:34.510 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:34.516 -05 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:00:34.517 -05 000000089 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:00:34.517 -05 000000089 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:00:34.583 -05 000000055 INF: FPGA: Recv ZSEL 15-12-21 21:00:34.584 -05 000000089 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:00:34.584 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:34.590 -05 000000089 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:00:34.593 -05 000000089 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:00:34.593 -05 000000089 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:00:34.645 -05 000000092 INF: FPGA: Recv ZSTEP 15-12-21 21:00:34.646 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:34.668 -05 000000089 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:00:34.669 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:34.729 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:34.729 -05 000000089 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:00:34.732 -05 000000089 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:00:34.732 -05 000000089 INF: Z Motor: Arming to move to -0.0812 mm 15-12-21 21:00:34.732 -05 000000089 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:00:34.831 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:34.832 -05 000000045 INF: FPGA: Recv ZYT 15-12-21 21:00:34.833 -05 000000089 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1054637 enc / 10.546 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:00:34.833 -05 000000089 INF: FPGA: Xmit ZARM 21293\n 15-12-21 21:00:34.834 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:34.916 -05 000000060 INF: FPGA: Recv ZARM 15-12-21 21:00:34.917 -05 000000089 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 84.0009 ms 15-12-21 21:00:34.917 -05 000000089 INF: Z Motor: ArmAbsStepped took 184.8296 ms 15-12-21 21:00:34.917 -05 000000089 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:34.919 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 21:00:34.919 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:34.921 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:34.996 -05 000000089 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:00:35.015 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:35.018 -05 000000089 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:00:35.053 -05 000000089 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:35.056 -05 000000089 INF: ====================================== 15-12-21 21:00:35.084 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:35.124 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:35.126 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:35.183 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.980C:A1\r\n 15-12-21 21:00:35.183 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:35.184 -05 000000086 INF: X Motor: Xmit PR ER\n 15-12-21 21:00:35.251 -05 000000086 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:00:35.251 -05 000000086 INF: X Motor: Moved to 75.9629 after 914 ms 15-12-21 21:00:35.252 -05 000000086 INF: ====================================== 15-12-21 21:00:35.377 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:35.488 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:35.754 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:35.849 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:35.850 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:35.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:35.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:36.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:36.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:36.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:36.116 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:36.176 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:36.197 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:36.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:36.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:36.354 -05 000000037 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:00:36.355 -05 000000037 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:00:36.355 -05 000000037 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:00:36.439 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:36.506 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:36.756 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:36.816 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:37.066 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:37.128 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:37.378 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:37.443 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:37.547 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:37.628 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.111C:A1\r\n 15-12-21 21:00:37.628 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:37.693 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:37.738 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:37.751 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:37.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:37.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:37.919 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:37.940 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:37.940 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:37.941 -05 000000061 INF: Y Motor: Moved to 70.6885 after 3605 ms 15-12-21 21:00:37.946 -05 000000061 INF: ====================================== 15-12-21 21:00:37.956 -05 000000025 INF: ===================Move X,Y=================== 15-12-21 21:00:37.959 -05 000000025 INF: ====================================== 15-12-21 21:00:38.001 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:38.001 -05 000000037 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:00:38.001 -05 000000037 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:00:38.001 -05 000000037 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:00:38.003 -05 000000037 INF: ====================================== 15-12-21 21:00:38.005 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:00:38.014 -05 000000078 INF: ====================================== 15-12-21 21:00:38.016 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:00:38.017 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:38.017 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:00:38.046 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:38.065 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:00:38.065 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:38.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:38.066 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:00:38.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:38.123 -05 000000089 INF: FPGA: Recv ZFREQCL 15-12-21 21:00:38.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:00:38.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:38.125 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:00:38.188 -05 000000078 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:00:38.188 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:00:38.189 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:00:38.190 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:00:38.196 -05 000000055 INF: ===================TDI FPGA Arm=================== 15-12-21 21:00:38.196 -05 000000056 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:00:38.196 -05 000000056 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:00:38.200 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:00:38.210 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:00:38.210 -05 000000055 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:00:38.250 -05 000000061 INF: FPGA: Recv TDIYPOS 15-12-21 21:00:38.251 -05 000000056 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:00:38.251 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:00:38.252 -05 000000056 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:00:38.252 -05 000000056 INF: ====================================== 15-12-21 21:00:38.257 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:00:38.258 -05 000000055 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:00:38.312 -05 000000025 INF: FPGA: Recv TDIYARM3 15-12-21 21:00:38.313 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:00:38.316 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:38.317 -05 000000055 INF: ===================TDI FPGA Arm=================== 15-12-21 21:00:38.319 -05 000000055 INF: ====================================== 15-12-21 21:00:38.326 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:00:38.328 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:38.328 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:38.329 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:38.333 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:38.341 -05 000000056 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:00:38.341 -05 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:00:38.342 -05 000000056 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:00:38.342 -05 000000056 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:00:38.342 -05 000000056 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:00:38.342 -05 000000056 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:00:38.342 -05 000000090 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:00:38.342 -05 000000090 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:00:38.342 -05 000000090 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:00:38.349 -05 000000090 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:00:38.375 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:38.500 -05 000000037 INF: FPGA: Recv EX1MV 15-12-21 21:00:38.500 -05 000000090 INF: Excitation Filter 1: Moved -36 steps in 158.1477 ms 15-12-21 21:00:38.500 -05 000000090 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 158.3274 ms 15-12-21 21:00:38.500 -05 000000090 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 158.4384 ms 15-12-21 21:00:38.501 -05 000000090 INF: ====================================== 15-12-21 21:00:38.625 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:38.688 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:38.689 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 21:00:38.749 -05 000000025 INF: FPGA: Recv EX2MV 15-12-21 21:00:38.749 -05 000000056 INF: Excitation Filter 2: Moved -107 steps in 407.4094 ms 15-12-21 21:00:38.749 -05 000000056 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 407.6239 ms 15-12-21 21:00:38.750 -05 000000056 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 407.7548 ms 15-12-21 21:00:38.751 -05 000000056 INF: ====================================== 15-12-21 21:00:38.757 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:38.799 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:00:38.821 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:38.826 -05 000000045 INF: ===================Camera TDI=================== 15-12-21 21:00:38.826 -05 000000092 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:00:38.826 -05 000000037 INF: ===================Move Y Motor without settling=================== 15-12-21 21:00:38.827 -05 000000037 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:00:38.848 -05 000000037 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:00:38.849 -05 000000037 INF: Y Motor: Xmit 1G\n 15-12-21 21:00:38.850 -05 000000060 INF: ===================FPGA Z Wait=================== 15-12-21 21:00:38.851 -05 000000060 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:00:38.851 -05 000000092 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:00:38.852 -05 000000045 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:00:38.853 -05 000000092 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:00:38.858 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:00:38.859 -05 000000055 INF: ===================Camera TDI=================== 15-12-21 21:00:38.874 -05 000000037 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:00:38.874 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 21:00:38.874 -05 000000057 INF: Current Position of Pump is: 21120 15-12-21 21:00:38.874 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:00:38.875 -05 000000037 INF: Y Motor: Recv 1G\r\n 15-12-21 21:00:38.876 -05 000000037 INF: Y Motor: Xmit 1D\n 15-12-21 21:00:38.939 -05 000000037 INF: Y Motor: Recv 1D\r\n 15-12-21 21:00:38.940 -05 000000037 INF: Y Motor: Recv *407662\r\n 15-12-21 21:00:38.941 -05 000000037 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:00:38.982 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 21:00:39.058 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:39.194 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:39.196 -05 000000090 INF: FPGA: Recv ZWAIT 15-12-21 21:00:39.197 -05 000000060 INF: ====================================== 15-12-21 21:00:39.249 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:00:39.366 -05 000000078 INF: ===================Frame #5=================== 15-12-21 21:00:39.367 -05 000000055 INF: ===================Frame #5=================== 15-12-21 21:00:39.428 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:39.530 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:00:39.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:39.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:39.531 -05 000000078 INF: ===================Frame #18=================== 15-12-21 21:00:39.533 -05 000000055 INF: ===================Frame #18=================== 15-12-21 21:00:39.586 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:00:39.587 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:39.587 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 21:00:39.659 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:39.717 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:00:39.717 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:39.818 -05 000000078 INF: ===================Frame #41=================== 15-12-21 21:00:39.819 -05 000000055 INF: ===================Frame #41=================== 15-12-21 21:00:39.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:39.841 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:39.841 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:39.941 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 21:00:39.968 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:00:39.968 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:39.969 -05 000000078 INF: ===================Frame #53=================== 15-12-21 21:00:39.969 -05 000000055 INF: ===================Frame #53=================== 15-12-21 21:00:40.071 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:40.092 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:40.092 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:40.120 -05 000000078 INF: ===================Frame #65=================== 15-12-21 21:00:40.120 -05 000000055 INF: ===================Frame #65=================== 15-12-21 21:00:40.190 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:00:40.216 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:00:40.216 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:40.275 -05 000000055 INF: ===================Frame #77=================== 15-12-21 21:00:40.275 -05 000000078 INF: ===================Frame #77=================== 15-12-21 21:00:40.319 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:40.319 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:40.320 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:40.321 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:40.321 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:00:40.321 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:00:40.325 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°, FC temperature to 65°=================== 15-12-21 21:00:40.340 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.013C:A1\r\n 15-12-21 21:00:40.340 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:40.425 -05 000000055 INF: ===================Frame #89=================== 15-12-21 21:00:40.425 -05 000000078 INF: ===================Frame #89=================== 15-12-21 21:00:40.441 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:65.00\r 15-12-21 21:00:40.467 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:00:40.467 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:40.567 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:40.576 -05 000000078 INF: ===================Frame #101=================== 15-12-21 21:00:40.576 -05 000000055 INF: ===================Frame #101=================== 15-12-21 21:00:40.592 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.016C:A1\r\n 15-12-21 21:00:40.592 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:40.694 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:0:1\r 15-12-21 21:00:40.716 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:00:40.716 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:40.726 -05 000000078 INF: ===================Frame #113=================== 15-12-21 21:00:40.726 -05 000000055 INF: ===================Frame #113=================== 15-12-21 21:00:40.800 -05 000000068 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206=================== 15-12-21 21:00:40.800 -05 000000054 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206=================== 15-12-21 21:00:40.822 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:00:40.822 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:00:40.824 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:00:40.824 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:00:40.830 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:40.831 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:40.836 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:40.836 -05 000000057 INF: WaitCommand(25000) start 15-12-21 21:00:40.837 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 25 of 25 seconds left=================== 15-12-21 21:00:40.862 -05 000000027 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206, Registering and Extracting C025 L002 T1209, Registering and Extracting C025 L002 T1210=================== 15-12-21 21:00:40.863 -05 000000088 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206, Registering and Extracting C025 L002 T1209, Registering and Extracting C025 L002 T1210=================== 15-12-21 21:00:40.876 -05 000000055 INF: ===================Frame #125=================== 15-12-21 21:00:40.876 -05 000000078 INF: ===================Frame #125=================== 15-12-21 21:00:40.898 -05 000000028 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206, Registering and Extracting C025 L002 T1209=================== 15-12-21 21:00:40.912 -05 000000063 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205, Registering and Extracting C025 L002 T1206=================== 15-12-21 21:00:40.915 -05 000000009 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1205=================== 15-12-21 21:00:40.922 -05 000000079 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204=================== 15-12-21 21:00:40.962 -05 000000031 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211=================== 15-12-21 21:00:40.962 -05 000000072 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212=================== 15-12-21 21:00:40.962 -05 000000044 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212, Registering and Extracting C025 L002 T1213=================== 15-12-21 21:00:40.962 -05 000000020 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212, Registering and Extracting C025 L002 T1213, Registering and Extracting C025 L002 T1214=================== 15-12-21 21:00:40.968 -05 000000051 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212, Registering and Extracting C025 L002 T1213=================== 15-12-21 21:00:41.014 -05 000000048 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212=================== 15-12-21 21:00:41.026 -05 000000078 INF: ===================Frame #137=================== 15-12-21 21:00:41.026 -05 000000055 INF: ===================Frame #137=================== 15-12-21 21:00:41.062 -05 000000034 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212, Registering and Extracting C025 L002 T1215, Registering and Extracting C025 L002 T1216=================== 15-12-21 21:00:41.062 -05 000000082 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212, Registering and Extracting C025 L002 T1215, Registering and Extracting C025 L002 T1216=================== 15-12-21 21:00:41.177 -05 000000078 INF: ===================Frame #148=================== 15-12-21 21:00:41.201 -05 000000055 INF: ===================Frame #148=================== 15-12-21 21:00:41.338 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:41.455 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:41.455 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:41.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:41.575 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:41.575 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:41.705 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:41.763 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:41.763 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:41.838 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:41.838 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 24 of 25 seconds left=================== 15-12-21 21:00:42.740 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:42.828 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.869C:A1\r\n 15-12-21 21:00:42.828 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:42.839 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:42.839 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 23 of 25 seconds left=================== 15-12-21 21:00:43.125 -05 000000055 INF: ===================Frame #302=================== 15-12-21 21:00:43.128 -05 000000078 INF: ===================Frame #303=================== 15-12-21 21:00:43.143 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:43.150 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:43.150 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:43.267 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:43.278 -05 000000078 INF: ===================Frame #315=================== 15-12-21 21:00:43.337 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:43.337 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:43.429 -05 000000078 INF: ===================Frame #326=================== 15-12-21 21:00:43.460 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:43.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:43.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:43.840 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:43.840 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 22 of 25 seconds left=================== 15-12-21 21:00:44.691 -05 000000055 INF: ===================Frame #426=================== 15-12-21 21:00:44.819 -05 000000078 INF: ===================Frame #436=================== 15-12-21 21:00:44.833 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:44.840 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:44.840 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 21 of 25 seconds left=================== 15-12-21 21:00:44.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:44.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:44.957 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:44.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:44.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:45.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:45.101 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:45.101 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:45.377 -05 000000055 INF: ===================Frame #480=================== 15-12-21 21:00:45.442 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:45.476 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 21:00:45.476 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:45.513 -05 000000078 INF: ===================Frame #491=================== 15-12-21 21:00:45.666 -05 000000078 INF: ===================Frame #503=================== 15-12-21 21:00:45.695 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:45.725 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.034C:A1\r\n 15-12-21 21:00:45.725 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:45.759 -05 000000055 INF: ===================Frame #511=================== 15-12-21 21:00:45.817 -05 000000078 INF: ===================Frame #515=================== 15-12-21 21:00:45.841 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:45.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 20 of 25 seconds left=================== 15-12-21 21:00:45.910 -05 000000055 INF: ===================Frame #523=================== 15-12-21 21:00:45.969 -05 000000078 INF: ===================Frame #527=================== 15-12-21 21:00:46.071 -05 000000055 INF: ===================Frame #535=================== 15-12-21 21:00:46.119 -05 000000078 INF: ===================Frame #539=================== 15-12-21 21:00:46.223 -05 000000055 INF: ===================Frame #547=================== 15-12-21 21:00:46.276 -05 000000078 INF: ===================Frame #552=================== 15-12-21 21:00:46.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:46.373 -05 000000055 INF: ===================Frame #559=================== 15-12-21 21:00:46.409 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:46.409 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:46.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:46.526 -05 000000055 INF: ===================Frame #571=================== 15-12-21 21:00:46.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:46.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:46.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:46.660 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:46.660 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:46.676 -05 000000055 INF: ===================Frame #583=================== 15-12-21 21:00:46.739 -05 000000078 INF: ===================Frame #588=================== 15-12-21 21:00:46.826 -05 000000055 INF: ===================Frame #595=================== 15-12-21 21:00:46.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:46.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 19 of 25 seconds left=================== 15-12-21 21:00:46.937 -05 000000078 INF: ===================Frame #604=================== 15-12-21 21:00:46.976 -05 000000055 INF: ===================Frame #607=================== 15-12-21 21:00:47.090 -05 000000088 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212=================== 15-12-21 21:00:47.090 -05 000000027 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211, Registering and Extracting C025 L002 T1212=================== 15-12-21 21:00:47.106 -05 000000078 INF: ===================Frame #617=================== 15-12-21 21:00:47.127 -05 000000055 INF: ===================Frame #619=================== 15-12-21 21:00:47.185 -05 000000072 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204, Registering and Extracting C025 L002 T1211=================== 15-12-21 21:00:47.256 -05 000000078 INF: ===================Frame #629=================== 15-12-21 21:00:47.277 -05 000000055 INF: ===================Frame #631=================== 15-12-21 21:00:47.406 -05 000000078 INF: ===================Frame #641=================== 15-12-21 21:00:47.427 -05 000000055 INF: ===================Frame #643=================== 15-12-21 21:00:47.503 -05 000000044 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203, Registering and Extracting C025 L002 T1204=================== 15-12-21 21:00:47.556 -05 000000078 INF: ===================Frame #653=================== 15-12-21 21:00:47.577 -05 000000055 INF: ===================Frame #654=================== 15-12-21 21:00:47.602 -05 000000020 INF: ===================Registering and Extracting C025 L002 T1201, Registering and Extracting C025 L002 T1202, Registering and Extracting C025 L002 T1203=================== 15-12-21 21:00:47.706 -05 000000078 INF: ===================Frame #665=================== 15-12-21 21:00:47.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:47.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 18 of 25 seconds left=================== 15-12-21 21:00:47.856 -05 000000078 INF: ===================Frame #676=================== 15-12-21 21:00:47.859 -05 000000031 INF: ===================Registering and Extracting C025 L002 T1201=================== 15-12-21 21:00:47.859 -05 000000034 INF: ===================Registering and Extracting C025 L002 T1201=================== 15-12-21 21:00:47.860 -05 000000082 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:00:47.883 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:47.886 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:47.892 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:00:47.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:47.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:48.002 -05 000000055 INF: ===================Frame #688=================== 15-12-21 21:00:48.004 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:48.013 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:48.014 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:00:48.033 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.624C:A1\r\n 15-12-21 21:00:48.033 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:48.111 -05 000000078 INF: ===================Frame #697=================== 15-12-21 21:00:48.125 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:48.133 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:00:48.134 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:48.157 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:48.157 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:48.222 -05 000000055 INF: ===================Frame #705=================== 15-12-21 21:00:48.234 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:48.239 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:00:48.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:48.261 -05 000000078 INF: ===================Frame #709=================== 15-12-21 21:00:48.281 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:48.281 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:48.350 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:48.372 -05 000000055 INF: ===================Frame #717=================== 15-12-21 21:00:48.411 -05 000000078 INF: ===================Frame #720=================== 15-12-21 21:00:48.522 -05 000000055 INF: ===================Frame #729=================== 15-12-21 21:00:48.673 -05 000000055 INF: ===================Frame #741=================== 15-12-21 21:00:48.702 -05 000000078 INF: ===================Frame #743=================== 15-12-21 21:00:48.824 -05 000000055 INF: ===================Frame #753=================== 15-12-21 21:00:48.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:48.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 17 of 25 seconds left=================== 15-12-21 21:00:48.853 -05 000000078 INF: ===================Frame #755=================== 15-12-21 21:00:48.975 -05 000000055 INF: ===================Frame #765=================== 15-12-21 21:00:49.003 -05 000000078 INF: ===================Frame #767=================== 15-12-21 21:00:49.126 -05 000000055 INF: ===================Frame #777=================== 15-12-21 21:00:49.153 -05 000000078 INF: ===================Frame #779=================== 15-12-21 21:00:49.249 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 21:00:49.276 -05 000000055 INF: ===================Frame #789=================== 15-12-21 21:00:49.304 -05 000000078 INF: ===================Frame #791=================== 15-12-21 21:00:49.427 -05 000000055 INF: ===================Frame #801=================== 15-12-21 21:00:49.454 -05 000000078 INF: ===================Frame #803=================== 15-12-21 21:00:49.502 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:49.530 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:49.530 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:49.577 -05 000000055 INF: ===================Frame #813=================== 15-12-21 21:00:49.604 -05 000000078 INF: ===================Frame #815=================== 15-12-21 21:00:49.630 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:49.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:49.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:49.728 -05 000000055 INF: ===================Frame #824=================== 15-12-21 21:00:49.750 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:49.754 -05 000000078 INF: ===================Frame #827=================== 15-12-21 21:00:49.781 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:49.781 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:49.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:49.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 16 of 25 seconds left=================== 15-12-21 21:00:49.904 -05 000000078 INF: ===================Frame #838=================== 15-12-21 21:00:50.202 -05 000000055 INF: ===================Frame #862=================== 15-12-21 21:00:50.296 -05 000000078 INF: ===================Frame #869=================== 15-12-21 21:00:50.400 -05 000000055 INF: ===================Frame #878=================== 15-12-21 21:00:50.447 -05 000000078 INF: ===================Frame #881=================== 15-12-21 21:00:50.578 -05 000000055 INF: ===================Frame #892=================== 15-12-21 21:00:50.581 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:50.590 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 21:00:50.590 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:50.597 -05 000000078 INF: ===================Frame #893=================== 15-12-21 21:00:50.750 -05 000000055 INF: ===================Frame #905=================== 15-12-21 21:00:50.750 -05 000000078 INF: ===================Frame #905=================== 15-12-21 21:00:50.841 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:50.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:50.842 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 15 of 25 seconds left=================== 15-12-21 21:00:50.900 -05 000000078 INF: ===================Frame #917=================== 15-12-21 21:00:50.900 -05 000000055 INF: ===================Frame #917=================== 15-12-21 21:00:51.051 -05 000000055 INF: ===================Frame #929=================== 15-12-21 21:00:51.051 -05 000000078 INF: ===================Frame #929=================== 15-12-21 21:00:51.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:51.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:51.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:51.201 -05 000000055 INF: ===================Frame #941=================== 15-12-21 21:00:51.201 -05 000000078 INF: ===================Frame #941=================== 15-12-21 21:00:51.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:51.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:51.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:51.351 -05 000000055 INF: ===================Frame #953=================== 15-12-21 21:00:51.351 -05 000000078 INF: ===================Frame #953=================== 15-12-21 21:00:51.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:51.465 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:51.465 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:51.503 -05 000000078 INF: ===================Frame #965=================== 15-12-21 21:00:51.503 -05 000000055 INF: ===================Frame #965=================== 15-12-21 21:00:51.653 -05 000000078 INF: ===================Frame #977=================== 15-12-21 21:00:51.653 -05 000000055 INF: ===================Frame #977=================== 15-12-21 21:00:51.803 -05 000000078 INF: ===================Frame #988=================== 15-12-21 21:00:51.803 -05 000000055 INF: ===================Frame #988=================== 15-12-21 21:00:51.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:51.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 14 of 25 seconds left=================== 15-12-21 21:00:52.163 -05 000000055 INF: ===================Frame #1017=================== 15-12-21 21:00:52.206 -05 000000078 INF: ===================Frame #1020=================== 15-12-21 21:00:52.314 -05 000000055 INF: ===================Frame #1029=================== 15-12-21 21:00:52.389 -05 000000078 INF: ===================Frame #1035=================== 15-12-21 21:00:52.464 -05 000000055 INF: ===================Frame #1041=================== 15-12-21 21:00:52.539 -05 000000078 INF: ===================Frame #1047=================== 15-12-21 21:00:52.615 -05 000000055 INF: ===================Frame #1053=================== 15-12-21 21:00:52.689 -05 000000078 INF: ===================Frame #1059=================== 15-12-21 21:00:52.696 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:52.766 -05 000000055 INF: ===================Frame #1065=================== 15-12-21 21:00:52.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:52.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:52.839 -05 000000078 INF: ===================Frame #1070=================== 15-12-21 21:00:52.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:52.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 13 of 25 seconds left=================== 15-12-21 21:00:52.879 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:52.902 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:52.902 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:52.916 -05 000000055 INF: ===================Frame #1076=================== 15-12-21 21:00:53.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:53.026 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:53.026 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:53.095 -05 000000078 INF: ===================Frame #1091=================== 15-12-21 21:00:53.135 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:53.151 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 66.057C:A1\r\n 15-12-21 21:00:53.151 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:53.197 -05 000000055 INF: ===================Frame #1099=================== 15-12-21 21:00:53.245 -05 000000078 INF: ===================Frame #1102=================== 15-12-21 21:00:53.348 -05 000000055 INF: ===================Frame #1111=================== 15-12-21 21:00:53.437 -05 000000078 INF: ===================Frame #1118=================== 15-12-21 21:00:53.498 -05 000000055 INF: ===================Frame #1122=================== 15-12-21 21:00:53.607 -05 000000078 INF: ===================Frame #1131=================== 15-12-21 21:00:53.704 -05 000000055 INF: ===================Frame #1139=================== 15-12-21 21:00:53.757 -05 000000078 INF: ===================Frame #1143=================== 15-12-21 21:00:53.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:53.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 12 of 25 seconds left=================== 15-12-21 21:00:53.854 -05 000000055 INF: ===================Frame #1151=================== 15-12-21 21:00:53.909 -05 000000078 INF: ===================Frame #1155=================== 15-12-21 21:00:54.004 -05 000000055 INF: ===================Frame #1162=================== 15-12-21 21:00:54.059 -05 000000078 INF: ===================Frame #1167=================== 15-12-21 21:00:54.209 -05 000000078 INF: ===================Frame #1179=================== 15-12-21 21:00:54.211 -05 000000055 INF: ===================Frame #1179=================== 15-12-21 21:00:54.260 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:54.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:54.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:54.360 -05 000000078 INF: ===================Frame #1191=================== 15-12-21 21:00:54.361 -05 000000055 INF: ===================Frame #1191=================== 15-12-21 21:00:54.377 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:54.397 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:54.397 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:54.503 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:54.510 -05 000000078 INF: ===================Frame #1203=================== 15-12-21 21:00:54.511 -05 000000055 INF: ===================Frame #1203=================== 15-12-21 21:00:54.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:54.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:54.660 -05 000000078 INF: ===================Frame #1214=================== 15-12-21 21:00:54.661 -05 000000055 INF: ===================Frame #1214=================== 15-12-21 21:00:54.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:54.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 11 of 25 seconds left=================== 15-12-21 21:00:54.917 -05 000000055 INF: ===================Frame #1235=================== 15-12-21 21:00:54.963 -05 000000078 INF: ===================Frame #1238=================== 15-12-21 21:00:55.067 -05 000000055 INF: ===================Frame #1247=================== 15-12-21 21:00:55.141 -05 000000078 INF: ===================Frame #1250=================== 15-12-21 21:00:55.146 -05 000000061 INF: FPGA: Recv TDIYWAIT 15-12-21 21:00:55.148 -05 000000092 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:00:55.158 -05 000000092 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:00:55.167 -05 000000041 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:00:55.168 -05 000000041 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:00:55.168 -05 000000041 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:00:55.168 -05 000000041 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:00:55.168 -05 000000041 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:00:55.168 -05 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:00:55.169 -05 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:00:55.169 -05 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:00:55.169 -05 000000090 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:00:55.173 -05 000000090 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:00:55.174 -05 000000078 INF: Camera complete - got 1250 frames. 15-12-21 21:00:55.176 -05 000000078 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:00:55.332 -05 000000029 INF: FPGA: Recv EX1MV 15-12-21 21:00:55.332 -05 000000041 INF: Excitation Filter 1: Moved 36 steps in 164.1021 ms 15-12-21 21:00:55.332 -05 000000041 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 164.239 ms 15-12-21 21:00:55.332 -05 000000041 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 164.3364 ms 15-12-21 21:00:55.333 -05 000000041 INF: ====================================== 15-12-21 21:00:55.517 -05 000000055 INF: ===================Frame #1250=================== 15-12-21 21:00:55.517 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:00:55.549 -05 000000078 INF: ====================================== 15-12-21 21:00:55.573 -05 000000055 INF: Camera complete - got 1250 frames. 15-12-21 21:00:55.574 -05 000000055 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:00:55.584 -05 000000078 INF: FPGA: Recv EX2MV 15-12-21 21:00:55.584 -05 000000090 INF: Excitation Filter 2: Moved 107 steps in 415.817 ms 15-12-21 21:00:55.585 -05 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 415.9996 ms 15-12-21 21:00:55.585 -05 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 416.0943 ms 15-12-21 21:00:55.585 -05 000000090 INF: ====================================== 15-12-21 21:00:55.587 -05 000000092 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:00:55.597 -05 000000092 INF: ====================================== 15-12-21 21:00:55.770 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:00:55.901 -05 000000055 INF: ===================Camera TDI=================== 15-12-21 21:00:55.901 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:55.901 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 10 of 25 seconds left=================== 15-12-21 21:00:55.902 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 21:00:55.902 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:55.903 -05 000000037 INF: Y Motor: Moved to 9.0764 after 16960 ms 15-12-21 21:00:55.903 -05 000000037 INF: ====================================== 15-12-21 21:00:55.934 -05 000000055 INF: ====================================== 15-12-21 21:00:55.938 -05 000000045 INF: ===================Camera TDI=================== 15-12-21 21:00:55.941 -05 000000045 INF: ====================================== 15-12-21 21:00:55.955 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:55.960 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:00:55.962 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:55.987 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:00:56.031 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:56.031 -05 000000086 INF: FPGA: Recv TDICLINES 10278 15-12-21 21:00:56.040 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:00:56.212 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:56.212 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:56.221 -05 000000089 INF: FPGA: Recv TDIYERD 907647 15-12-21 21:00:56.221 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 21:00:56.302 -05 000000041 INF: FPGA: Recv ZADCR 25369 15-12-21 21:00:56.310 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.097. Y moved -60.304 mm 15-12-21 21:00:56.310 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:00:56.323 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:00:56.361 -05 000000089 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:00:56.361 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:00:56.361 -05 000000062 INF: TDIScan finished after 22295.1385 ms 15-12-21 21:00:56.361 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:00:56.361 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:00:56.364 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.394 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.988C:A1\r\n 15-12-21 21:00:56.394 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:56.398 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.913 um 15-12-21 21:00:56.398 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.400 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.402 -05 000000061 INF: ===================Dither Clean Up Command=================== 15-12-21 21:00:56.402 -05 000000041 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:00:56.402 -05 000000089 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:00:56.402 -05 000000041 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:00:56.402 -05 000000041 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:00:56.402 -05 000000089 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:00:56.403 -05 000000084 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:56.403 -05 000000029 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:00:56.403 -05 000000084 INF: ===================LFT:Extracting coords=================== 15-12-21 21:00:56.409 -05 000000056 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:00:56.431 -05 000000029 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:00:56.449 -05 000000084 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:56.451 -05 000000084 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:00:56.452 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:56.452 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:56.452 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:56.453 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:56.453 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:56.453 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:56.455 -05 000000089 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:00:56.455 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:56.455 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:00:56.456 -05 000000089 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:00:56.456 -05 000000056 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:00:56.456 -05 000000089 INF: ====================================== 15-12-21 21:00:56.508 -05 000000089 INF: FPGA: Recv ZSTEP 15-12-21 21:00:56.528 -05 000000089 INF: FPGA: Recv ZSEL 15-12-21 21:00:56.528 -05 000000029 INF: FPGA: Xmit ZDACW 31778\n 15-12-21 21:00:56.529 -05 000000056 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:00:56.530 -05 000000056 INF: ====================================== 15-12-21 21:00:56.531 -05 000000041 INF: ====================================== 15-12-21 21:00:56.555 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:56.581 -05 000000040 INF: FPGA: Recv ZDACW 15-12-21 21:00:56.581 -05 000000029 INF: ====================================== 15-12-21 21:00:56.583 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:56.583 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:56.734 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:56.753 -05 000000037 INF: LFT found best fwhm score 2.48184 in 255 ms 15-12-21 21:00:56.753 -05 000000037 INF: LFT found good score at index 7633 with fwhm value 2.48184. Next cycle, cycle 26 starting Z position for bottom surface is at -0.100 mm FC:B, C:25,L:1,B 15-12-21 21:00:56.754 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:56.755 -05 000000037 INF: ====================================== 15-12-21 21:00:56.756 -05 000000090 INF: LFT found best fwhm score 2.475261 in 260 ms 15-12-21 21:00:56.756 -05 000000090 INF: LFT found good score at index 29 with fwhm value 2.475261. Next cycle, cycle 26 starting Z position for bottom surface is at -0.102 mm FC:B, C:25,L:1,B 15-12-21 21:00:56.756 -05 000000078 INF: LFT found best fwhm score 2.544947 in 261 ms 15-12-21 21:00:56.756 -05 000000078 INF: LFT found good score at index 8457 with fwhm value 2.544947. Next cycle, cycle 26 starting Z position for bottom surface is at -0.100 mm FC:B, C:25,L:1,B 15-12-21 21:00:56.756 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:56.757 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:56.757 -05 000000078 INF: ====================================== 15-12-21 21:00:56.759 -05 000000090 INF: ====================================== 15-12-21 21:00:56.774 -05 000000055 INF: LFT found best fwhm score 2.297712 in 278 ms 15-12-21 21:00:56.774 -05 000000055 INF: LFT found good score at index 8645 with fwhm value 2.297712. Next cycle, cycle 26 starting Z position for bottom surface is at -0.100 mm FC:B, C:25,L:1,B 15-12-21 21:00:56.774 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 21:00:56.775 -05 000000055 INF: ====================================== 15-12-21 21:00:56.779 -05 000000084 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:00:56.782 -05 000000084 INF: LFT weighted average best Z for bottom surface is at -0.101mm FC:B, C:25,L:1,B 15-12-21 21:00:56.782 -05 000000084 INF: ====================================== 15-12-21 21:00:56.784 -05 000000061 INF: ====================================== 15-12-21 21:00:56.786 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:56.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:56.793 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:00:56.794 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.794 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:00:56.794 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.794 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:00:56.795 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.795 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:00:56.795 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.796 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 21:00:56.796 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 21:00:56.798 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 10 of 25 seconds left, Waiting for image analysis=================== 15-12-21 21:00:56.798 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 10 of 25 seconds left=================== 15-12-21 21:00:56.798 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:00:56.798 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 21:00:56.798 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:00:56.804 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:00:56.804 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:00:56.804 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 21:00:56.805 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:00:56.805 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 21:00:56.819 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.819 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:00:56.819 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:00:56.819 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -121.2 um, section = A_1 15-12-21 21:00:56.822 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:00:56.823 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:00:56.826 -05 000000056 INF: ===================MoveEmissionFilters=================== 15-12-21 21:00:56.826 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:00:56.826 -05 000000023 INF: ===================Move X,Y=================== 15-12-21 21:00:56.830 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:00:56.830 -05 000000084 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:00:56.830 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:00:56.830 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:00:56.830 -05 000000061 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:00:56.830 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:00:56.830 -05 000000023 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:00:56.831 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:00:56.832 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:00:56.832 -05 000000089 INF: ===================Move Y Motor without settling=================== 15-12-21 21:00:56.832 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:00:56.832 -05 000000078 INF: ===================Move X Motor without settling=================== 15-12-21 21:00:56.832 -05 000000089 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 21:00:56.832 -05 000000089 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:00:56.833 -05 000000084 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:00:56.838 -05 000000089 INF: Y Motor: Xmit 1G\n 15-12-21 21:00:56.843 -05 000000078 INF: X Motor: Xmit PR VM\n 15-12-21 21:00:56.844 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:00:56.844 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:00:56.844 -05 000000045 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:00:56.844 -05 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:00:56.844 -05 000000090 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:00:56.844 -05 000000055 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:00:56.844 -05 000000040 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:00:56.844 -05 000000045 INF: ====================================== 15-12-21 21:00:56.852 -05 000000037 INF: ====================================== 15-12-21 21:00:56.852 -05 000000055 INF: ====================================== 15-12-21 21:00:56.852 -05 000000090 INF: ====================================== 15-12-21 21:00:56.852 -05 000000040 INF: ====================================== 15-12-21 21:00:56.858 -05 000000084 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:00:56.859 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:00:56.865 -05 000000045 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:00:56.865 -05 000000055 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:00:56.865 -05 000000090 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:00:56.865 -05 000000040 INF: ===================Camera Arm TDI=================== 15-12-21 21:00:56.866 -05 000000037 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:56.866 -05 000000045 INF: ====================================== 15-12-21 21:00:56.870 -05 000000055 INF: ====================================== 15-12-21 21:00:56.871 -05 000000090 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:00:56.873 -05 000000041 INF: ====================================== 15-12-21 21:00:56.873 -05 000000084 INF: ====================================== 15-12-21 21:00:56.873 -05 000000090 INF: ====================================== 15-12-21 21:00:56.880 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:56.881 -05 000000089 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:00:56.881 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:00:56.883 -05 000000078 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:00:56.883 -05 000000078 INF: X Motor: Xmit PR VI\n 15-12-21 21:00:56.883 -05 000000089 INF: Y Motor: Recv 1G\r\n 15-12-21 21:00:56.883 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:00:56.885 -05 000000089 INF: Y Motor: Xmit 1D\n 15-12-21 21:00:56.892 -05 000000037 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:00:56.894 -05 000000029 INF: ====================================== 15-12-21 21:00:56.895 -05 000000037 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:00:56.897 -05 000000037 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:00:56.901 -05 000000092 INF: ====================================== 15-12-21 21:00:56.904 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:56.906 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 9 of 25 seconds left=================== 15-12-21 21:00:56.908 -05 000000041 INF: FPGA: Recv ZSEL 15-12-21 21:00:56.913 -05 000000037 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:00:56.918 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:56.918 -05 000000056 INF: ====================================== 15-12-21 21:00:56.946 -05 000000037 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:00:56.950 -05 000000037 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:00:56.950 -05 000000037 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:00:56.963 -05 000000089 INF: Y Motor: Recv 1D\r\n 15-12-21 21:00:56.963 -05 000000078 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:00:56.963 -05 000000078 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:00:56.964 -05 000000078 INF: X Motor: Moving to 76.7340 mm @15.000 mm/sec, started at 75.9629 mm 15-12-21 21:00:56.964 -05 000000089 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:00:56.964 -05 000000078 INF: X Motor: Xmit MA 7264\n 15-12-21 21:00:56.968 -05 000000089 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:00:56.971 -05 000000029 INF: FPGA: Recv ZSTEP 15-12-21 21:00:56.973 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:56.985 -05 000000037 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:00:56.988 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:56.999 -05 000000037 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:00:57.001 -05 000000037 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:00:57.001 -05 000000037 INF: Z Motor: Arming to move to -0.0812 mm 15-12-21 21:00:57.001 -05 000000037 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:00:57.015 -05 000000020 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103=================== 15-12-21 21:00:57.015 -05 000000082 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103=================== 15-12-21 21:00:57.015 -05 000000044 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104=================== 15-12-21 21:00:57.015 -05 000000072 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105=================== 15-12-21 21:00:57.015 -05 000000034 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106=================== 15-12-21 21:00:57.015 -05 000000031 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106=================== 15-12-21 21:00:57.015 -05 000000088 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2107=================== 15-12-21 21:00:57.016 -05 000000027 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2107, Registering and Extracting C025 L001 T2108=================== 15-12-21 21:00:57.020 -05 000000078 INF: X Motor: Recv MA 7264\r\n> 15-12-21 21:00:57.020 -05 000000078 INF: X Motor: WaitUntilStopped 60051 15-12-21 21:00:57.033 -05 000000084 INF: FPGA: Recv ZYT 15-12-21 21:00:57.034 -05 000000037 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907642 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:00:57.034 -05 000000037 INF: FPGA: Xmit ZARM 21293\n 15-12-21 21:00:57.094 -05 000000090 INF: FPGA: Recv ZARM 15-12-21 21:00:57.094 -05 000000037 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.1109 ms 15-12-21 21:00:57.094 -05 000000037 INF: Z Motor: ArmAbsStepped took 92.5318 ms 15-12-21 21:00:57.095 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:00:57.103 -05 000000037 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:57.107 -05 000000037 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:00:57.111 -05 000000037 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:57.119 -05 000000037 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:00:57.124 -05 000000037 INF: ===================TDI Scan Setup=================== 15-12-21 21:00:57.128 -05 000000037 INF: ====================================== 15-12-21 21:00:57.486 -05 000000078 INF: X Motor: Xmit PR ER\n 15-12-21 21:00:57.548 -05 000000078 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:00:57.548 -05 000000078 INF: X Motor: Moved to 76.7344 after 528 ms 15-12-21 21:00:57.549 -05 000000078 INF: ====================================== 15-12-21 21:00:57.908 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:57.909 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 8 of 25 seconds left=================== 15-12-21 21:00:58.132 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:00:58.144 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:00:58.144 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:58.317 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:00:58.392 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.901C:A1\r\n 15-12-21 21:00:58.392 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:58.610 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:00:58.642 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:58.642 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:58.740 -05 000000040 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:00:58.740 -05 000000040 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:00:58.740 -05 000000040 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:00:58.764 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:00:58.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:00:58.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:00:58.921 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:58.922 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 7 of 25 seconds left=================== 15-12-21 21:00:59.922 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:00:59.922 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 6 of 25 seconds left=================== 15-12-21 21:01:00.151 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:00.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:00.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:00.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:00.356 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:00.356 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:00.456 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:00.481 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:00.481 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:00.597 -05 000000040 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:01:00.598 -05 000000040 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:01:00.598 -05 000000040 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:01:00.600 -05 000000040 INF: ====================================== 15-12-21 21:01:00.602 -05 000000061 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:01:00.608 -05 000000061 INF: ====================================== 15-12-21 21:01:00.610 -05 000000089 INF: Y Motor: Moved to 70.6885 after 3642 ms 15-12-21 21:01:00.617 -05 000000089 INF: ====================================== 15-12-21 21:01:00.618 -05 000000023 INF: ===================Move X,Y=================== 15-12-21 21:01:00.623 -05 000000023 INF: ====================================== 15-12-21 21:01:00.632 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:01:00.690 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:00.690 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:01:00.745 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:01:00.746 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:01:00.793 -05 000000041 INF: FPGA: Recv ZFREQCL 15-12-21 21:01:00.794 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:01:00.794 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:00.794 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:01:00.861 -05 000000060 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:01:00.861 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:01:00.864 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:00.866 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:00.867 -05 000000090 INF: ===================TDI FPGA Arm=================== 15-12-21 21:01:00.867 -05 000000078 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:01:00.868 -05 000000078 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:01:00.869 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:00.872 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:01:00.873 -05 000000090 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:01:00.917 -05 000000029 INF: FPGA: Recv TDIYPOS 15-12-21 21:01:00.918 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:00.921 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:01:00.921 -05 000000090 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:01:00.929 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:00.929 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 5 of 25 seconds left=================== 15-12-21 21:01:00.933 -05 000000078 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:01:00.934 -05 000000078 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:01:00.934 -05 000000078 INF: ====================================== 15-12-21 21:01:00.978 -05 000000040 INF: FPGA: Recv TDIYARM3 15-12-21 21:01:00.979 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:00.981 -05 000000090 INF: ===================TDI FPGA Arm=================== 15-12-21 21:01:00.996 -05 000000090 INF: ====================================== 15-12-21 21:01:01.001 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:01.002 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:01.002 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:01.005 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:01.011 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:01.015 -05 000000040 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:01:01.015 -05 000000092 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:01:01.015 -05 000000040 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:01:01.015 -05 000000040 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:01:01.015 -05 000000040 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:01:01.015 -05 000000040 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:01:01.016 -05 000000092 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:01:01.016 -05 000000092 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:01:01.016 -05 000000092 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:01:01.021 -05 000000092 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:01:01.031 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:01.106 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 21:01:01.106 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:01.166 -05 000000060 INF: FPGA: Recv EX1MV 15-12-21 21:01:01.166 -05 000000040 INF: Excitation Filter 1: Moved -36 steps in 150.4037 ms 15-12-21 21:01:01.166 -05 000000040 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 150.5442 ms 15-12-21 21:01:01.166 -05 000000040 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 150.626 ms 15-12-21 21:01:01.167 -05 000000040 INF: ====================================== 15-12-21 21:01:01.416 -05 000000040 INF: FPGA: Recv EX2MV 15-12-21 21:01:01.416 -05 000000092 INF: Excitation Filter 2: Moved -107 steps in 400.5921 ms 15-12-21 21:01:01.416 -05 000000092 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 400.7714 ms 15-12-21 21:01:01.416 -05 000000092 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 400.857 ms 15-12-21 21:01:01.417 -05 000000092 INF: ====================================== 15-12-21 21:01:01.419 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:01.427 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:01.432 -05 000000055 INF: ===================FPGA Z Wait=================== 15-12-21 21:01:01.432 -05 000000060 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:01:01.432 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 21:01:01.432 -05 000000055 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:01:01.432 -05 000000041 INF: ===================Move Y Motor without settling=================== 15-12-21 21:01:01.432 -05 000000041 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:01:01.432 -05 000000041 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:01:01.438 -05 000000041 INF: Y Motor: Xmit 1G\n 15-12-21 21:01:01.441 -05 000000037 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:01:01.441 -05 000000060 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:01:01.442 -05 000000060 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:01:01.446 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 21:01:01.446 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 21:01:01.512 -05 000000041 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:01:01.513 -05 000000041 INF: Y Motor: Recv 1G\r\n 15-12-21 21:01:01.514 -05 000000041 INF: Y Motor: Xmit 1D\n 15-12-21 21:01:01.556 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:01.576 -05 000000041 INF: Y Motor: Recv 1D\r\n 15-12-21 21:01:01.577 -05 000000041 INF: Y Motor: Recv *407662\r\n 15-12-21 21:01:01.578 -05 000000041 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:01:01.791 -05 000000092 INF: FPGA: Recv ZWAIT 15-12-21 21:01:01.792 -05 000000055 INF: ====================================== 15-12-21 21:01:01.836 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:01.857 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:01.857 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:01.898 -05 000000056 INF: ===================Frame #1=================== 15-12-21 21:01:01.905 -05 000000089 INF: ===================Frame #1=================== 15-12-21 21:01:01.933 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:01.934 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 4 of 25 seconds left=================== 15-12-21 21:01:01.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:02.043 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:02.043 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:02.049 -05 000000056 INF: ===================Frame #13=================== 15-12-21 21:01:02.055 -05 000000089 INF: ===================Frame #13=================== 15-12-21 21:01:02.154 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:02.200 -05 000000056 INF: ===================Frame #25=================== 15-12-21 21:01:02.209 -05 000000089 INF: ===================Frame #25=================== 15-12-21 21:01:02.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:02.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:02.351 -05 000000056 INF: ===================Frame #37=================== 15-12-21 21:01:02.360 -05 000000089 INF: ===================Frame #37=================== 15-12-21 21:01:02.502 -05 000000056 INF: ===================Frame #49=================== 15-12-21 21:01:02.510 -05 000000089 INF: ===================Frame #49=================== 15-12-21 21:01:02.630 -05 000000082 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106=================== 15-12-21 21:01:02.630 -05 000000020 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106=================== 15-12-21 21:01:02.652 -05 000000056 INF: ===================Frame #60=================== 15-12-21 21:01:02.660 -05 000000089 INF: ===================Frame #61=================== 15-12-21 21:01:02.702 -05 000000048 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109, Registering and Extracting C025 L001 T2110=================== 15-12-21 21:01:02.703 -05 000000051 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109, Registering and Extracting C025 L001 T2110=================== 15-12-21 21:01:02.810 -05 000000089 INF: ===================Frame #73=================== 15-12-21 21:01:02.901 -05 000000056 INF: ===================Frame #80=================== 15-12-21 21:01:02.934 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:02.934 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 3 of 25 seconds left=================== 15-12-21 21:01:02.962 -05 000000089 INF: ===================Frame #85=================== 15-12-21 21:01:03.074 -05 000000031 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109=================== 15-12-21 21:01:03.085 -05 000000056 INF: ===================Frame #95=================== 15-12-21 21:01:03.104 -05 000000009 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109, Registering and Extracting C025 L001 T2111=================== 15-12-21 21:01:03.110 -05 000000044 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109=================== 15-12-21 21:01:03.112 -05 000000089 INF: ===================Frame #97=================== 15-12-21 21:01:03.204 -05 000000028 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109, Registering and Extracting C025 L001 T2112=================== 15-12-21 21:01:03.214 -05 000000072 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109=================== 15-12-21 21:01:03.236 -05 000000056 INF: ===================Frame #107=================== 15-12-21 21:01:03.262 -05 000000089 INF: ===================Frame #109=================== 15-12-21 21:01:03.305 -05 000000063 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109, Registering and Extracting C025 L001 T2113=================== 15-12-21 21:01:03.339 -05 000000088 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2109=================== 15-12-21 21:01:03.343 -05 000000034 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106=================== 15-12-21 21:01:03.396 -05 000000056 INF: ===================Frame #119=================== 15-12-21 21:01:03.404 -05 000000068 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2114, Registering and Extracting C025 L001 T2115=================== 15-12-21 21:01:03.405 -05 000000079 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2114, Registering and Extracting C025 L001 T2115=================== 15-12-21 21:01:03.411 -05 000000027 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2114=================== 15-12-21 21:01:03.412 -05 000000089 INF: ===================Frame #121=================== 15-12-21 21:01:03.505 -05 000000054 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2114, Registering and Extracting C025 L001 T2116=================== 15-12-21 21:01:03.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:03.547 -05 000000056 INF: ===================Frame #131=================== 15-12-21 21:01:03.570 -05 000000089 INF: ===================Frame #133=================== 15-12-21 21:01:03.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:03.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:03.698 -05 000000056 INF: ===================Frame #143=================== 15-12-21 21:01:03.720 -05 000000089 INF: ===================Frame #145=================== 15-12-21 21:01:03.729 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:03.744 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.333C:A1\r\n 15-12-21 21:01:03.744 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:03.850 -05 000000056 INF: ===================Frame #155=================== 15-12-21 21:01:03.866 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:03.907 -05 000000089 INF: ===================Frame #160=================== 15-12-21 21:01:03.931 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:03.931 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:03.934 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:03.935 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 2 of 25 seconds left=================== 15-12-21 21:01:04.001 -05 000000056 INF: ===================Frame #167=================== 15-12-21 21:01:04.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:04.089 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:04.089 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:04.151 -05 000000056 INF: ===================Frame #179=================== 15-12-21 21:01:04.302 -05 000000056 INF: ===================Frame #191=================== 15-12-21 21:01:04.454 -05 000000056 INF: ===================Frame #203=================== 15-12-21 21:01:04.610 -05 000000056 INF: ===================Frame #215=================== 15-12-21 21:01:04.762 -05 000000056 INF: ===================Frame #227=================== 15-12-21 21:01:04.916 -05 000000056 INF: ===================Frame #239=================== 15-12-21 21:01:04.936 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:04.936 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 1 of 25 seconds left=================== 15-12-21 21:01:05.067 -05 000000056 INF: ===================Frame #251=================== 15-12-21 21:01:05.218 -05 000000056 INF: ===================Frame #263=================== 15-12-21 21:01:05.336 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:05.353 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:05.353 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:05.369 -05 000000056 INF: ===================Frame #275=================== 15-12-21 21:01:05.401 -05 000000089 INF: ===================Frame #278=================== 15-12-21 21:01:05.468 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:05.533 -05 000000056 INF: ===================Frame #288=================== 15-12-21 21:01:05.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:05.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:05.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:05.662 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:05.662 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:05.841 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:05.841 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:05.841 -05 000000057 INF: WaitCommand(25000) end 15-12-21 21:01:05.841 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:05.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:01:05.843 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:05.909 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:05.910 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 21:01:05.910 -05 000000057 INF: Valve A2: Go to position 5 15-12-21 21:01:05.910 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 21:01:05.974 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 1\r 15-12-21 21:01:05.974 -05 000000057 INF: Valve A2: 41.901 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:01:05.974 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 1 to 5 15-12-21 21:01:05.974 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW5\r 15-12-21 21:01:05.975 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 21:01:05.975 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 21:01:06.218 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:06.255 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 21:01:06.255 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:06.726 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:06.910 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 21:01:06.911 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:06.912 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 21:01:07.083 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:07.097 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:01:07.097 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:07.097 -05 000000089 INF: ===================Frame #412=================== 15-12-21 21:01:07.209 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:07.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:07.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:07.387 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 21:01:07.424 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:01:07.424 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:07.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:07.533 -05 000000056 INF: ===================Frame #446=================== 15-12-21 21:01:07.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:07.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:07.668 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:07.736 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:01:07.736 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:07.851 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:07.851 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:07.852 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 21:01:07.852 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:07.924 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:07.925 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:07.925 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:07.931 -05 000000089 INF: ===================Frame #478=================== 15-12-21 21:01:07.940 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:01:08.024 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:01:08.055 -05 000000051 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106, Registering and Extracting C025 L001 T2114=================== 15-12-21 21:01:08.110 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 21:01:08.110 -05 000000057 INF: Current Position of Pump is: 21120 15-12-21 21:01:08.124 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 21:01:08.210 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P4608R\r 15-12-21 21:01:08.248 -05 000000048 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105, Registering and Extracting C025 L001 T2106=================== 15-12-21 21:01:08.297 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:08.397 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:08.472 -05 000000089 INF: ===================Frame #521=================== 15-12-21 21:01:08.483 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:08.531 -05 000000056 INF: ===================Frame #525=================== 15-12-21 21:01:08.623 -05 000000089 INF: ===================Frame #532=================== 15-12-21 21:01:08.682 -05 000000056 INF: ===================Frame #537=================== 15-12-21 21:01:08.733 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:08.795 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:08.832 -05 000000056 INF: ===================Frame #549=================== 15-12-21 21:01:08.847 -05 000000089 INF: ===================Frame #550=================== 15-12-21 21:01:08.867 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:08.922 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.967C:A1\r\n 15-12-21 21:01:08.922 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:08.983 -05 000000056 INF: ===================Frame #561=================== 15-12-21 21:01:09.018 -05 000000089 INF: ===================Frame #564=================== 15-12-21 21:01:09.045 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:09.107 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:09.135 -05 000000056 INF: ===================Frame #573=================== 15-12-21 21:01:09.136 -05 000000068 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104, Registering and Extracting C025 L001 T2105=================== 15-12-21 21:01:09.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:09.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:09.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:09.187 -05 000000089 INF: ===================Frame #577=================== 15-12-21 21:01:09.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:09.285 -05 000000056 INF: ===================Frame #585=================== 15-12-21 21:01:09.297 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:09.297 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:09.337 -05 000000089 INF: ===================Frame #589=================== 15-12-21 21:01:09.357 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:09.380 -05 000000063 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103, Registering and Extracting C025 L001 T2104=================== 15-12-21 21:01:09.399 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:09.421 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:09.422 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:09.422 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:09.436 -05 000000056 INF: ===================Frame #597=================== 15-12-21 21:01:09.462 -05 000000028 INF: ===================Registering and Extracting C025 L001 T2101, Registering and Extracting C025 L001 T2102, Registering and Extracting C025 L001 T2103=================== 15-12-21 21:01:09.487 -05 000000089 INF: ===================Frame #601=================== 15-12-21 21:01:09.541 -05 000000079 INF: ===================Registering and Extracting C025 L001 T2101=================== 15-12-21 21:01:09.541 -05 000000009 INF: ===================Registering and Extracting C025 L001 T2101=================== 15-12-21 21:01:09.587 -05 000000056 INF: ===================Frame #609=================== 15-12-21 21:01:09.592 -05 000000054 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:01:09.637 -05 000000089 INF: ===================Frame #613=================== 15-12-21 21:01:09.659 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:09.665 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:01:09.671 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:09.732 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:09.737 -05 000000056 INF: ===================Frame #621=================== 15-12-21 21:01:09.787 -05 000000089 INF: ===================Frame #625=================== 15-12-21 21:01:09.859 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:09.867 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:01:09.887 -05 000000056 INF: ===================Frame #632=================== 15-12-21 21:01:09.938 -05 000000089 INF: ===================Frame #636=================== 15-12-21 21:01:09.982 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:09.991 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:10.000 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:01:10.044 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:10.125 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:10.131 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:01:10.212 -05 000000089 INF: ===================Frame #658=================== 15-12-21 21:01:10.236 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:10.289 -05 000000056 INF: ===================Frame #664=================== 15-12-21 21:01:10.294 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:10.356 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:10.356 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 21:01:10.390 -05 000000089 INF: ===================Frame #672=================== 15-12-21 21:01:10.457 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:01:10.498 -05 000000056 INF: ===================Frame #681=================== 15-12-21 21:01:10.544 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 21:01:10.544 -05 000000057 INF: Current Position of Pump is: 25728 15-12-21 21:01:10.544 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:01:10.573 -05 000000089 INF: ===================Frame #687=================== 15-12-21 21:01:10.644 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 21:01:10.648 -05 000000056 INF: ===================Frame #693=================== 15-12-21 21:01:10.709 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:10.725 -05 000000089 INF: ===================Frame #699=================== 15-12-21 21:01:10.730 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:10.731 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:10.731 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:10.798 -05 000000056 INF: ===================Frame #705=================== 15-12-21 21:01:10.830 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:10.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:10.876 -05 000000089 INF: ===================Frame #711=================== 15-12-21 21:01:10.919 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:10.920 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:10.920 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:10.952 -05 000000056 INF: ===================Frame #716=================== 15-12-21 21:01:11.021 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:11.028 -05 000000089 INF: ===================Frame #723=================== 15-12-21 21:01:11.045 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:11.045 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:11.169 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:11.179 -05 000000089 INF: ===================Frame #735=================== 15-12-21 21:01:11.230 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:11.231 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:11.231 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 21:01:11.232 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:11.234 -05 000000056 INF: ===================Frame #739=================== 15-12-21 21:01:11.293 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:01:11.293 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:11.332 -05 000000089 INF: ===================Frame #747=================== 15-12-21 21:01:11.384 -05 000000056 INF: ===================Frame #751=================== 15-12-21 21:01:11.398 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 21:01:11.417 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:01:11.417 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:11.483 -05 000000089 INF: ===================Frame #759=================== 15-12-21 21:01:11.521 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:11.536 -05 000000056 INF: ===================Frame #763=================== 15-12-21 21:01:11.546 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:01:11.546 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:11.634 -05 000000089 INF: ===================Frame #771=================== 15-12-21 21:01:11.652 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:11.653 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:11.653 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:11.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:11.655 -05 000000057 INF: WaitCommand(5000) start 15-12-21 21:01:11.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 21:01:11.687 -05 000000056 INF: ===================Frame #775=================== 15-12-21 21:01:11.725 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 21:01:11.732 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 21:01:11.732 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:11.787 -05 000000089 INF: ===================Frame #782=================== 15-12-21 21:01:11.838 -05 000000056 INF: ===================Frame #787=================== 15-12-21 21:01:11.934 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:11.980 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.001C:A1\r\n 15-12-21 21:01:11.980 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:11.990 -05 000000056 INF: ===================Frame #799=================== 15-12-21 21:01:12.088 -05 000000089 INF: ===================Frame #806=================== 15-12-21 21:01:12.141 -05 000000056 INF: ===================Frame #811=================== 15-12-21 21:01:12.267 -05 000000089 INF: ===================Frame #821=================== 15-12-21 21:01:12.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:12.291 -05 000000056 INF: ===================Frame #822=================== 15-12-21 21:01:12.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:12.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:12.398 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:12.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:12.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:12.418 -05 000000089 INF: ===================Frame #832=================== 15-12-21 21:01:12.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:12.542 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:12.542 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:12.613 -05 000000056 INF: ===================Frame #848=================== 15-12-21 21:01:12.624 -05 000000089 INF: ===================Frame #849=================== 15-12-21 21:01:12.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:12.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 21:01:12.774 -05 000000089 INF: ===================Frame #861=================== 15-12-21 21:01:12.809 -05 000000056 INF: ===================Frame #863=================== 15-12-21 21:01:12.925 -05 000000089 INF: ===================Frame #873=================== 15-12-21 21:01:12.960 -05 000000056 INF: ===================Frame #875=================== 15-12-21 21:01:13.075 -05 000000089 INF: ===================Frame #884=================== 15-12-21 21:01:13.110 -05 000000056 INF: ===================Frame #887=================== 15-12-21 21:01:13.260 -05 000000056 INF: ===================Frame #899=================== 15-12-21 21:01:13.300 -05 000000089 INF: ===================Frame #902=================== 15-12-21 21:01:13.411 -05 000000056 INF: ===================Frame #911=================== 15-12-21 21:01:13.470 -05 000000089 INF: ===================Frame #916=================== 15-12-21 21:01:13.561 -05 000000056 INF: ===================Frame #923=================== 15-12-21 21:01:13.649 -05 000000089 INF: ===================Frame #930=================== 15-12-21 21:01:13.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:13.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 21:01:13.711 -05 000000056 INF: ===================Frame #935=================== 15-12-21 21:01:13.767 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:13.789 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:13.789 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:13.826 -05 000000089 INF: ===================Frame #944=================== 15-12-21 21:01:13.862 -05 000000056 INF: ===================Frame #947=================== 15-12-21 21:01:13.892 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:13.916 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:13.916 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:13.996 -05 000000089 INF: ===================Frame #957=================== 15-12-21 21:01:14.012 -05 000000056 INF: ===================Frame #959=================== 15-12-21 21:01:14.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:14.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:14.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:14.146 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:14.146 -05 000000089 INF: ===================Frame #969=================== 15-12-21 21:01:14.162 -05 000000056 INF: ===================Frame #970=================== 15-12-21 21:01:14.164 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.710C:A1\r\n 15-12-21 21:01:14.164 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:14.297 -05 000000089 INF: ===================Frame #981=================== 15-12-21 21:01:14.448 -05 000000089 INF: ===================Frame #993=================== 15-12-21 21:01:14.454 -05 000000056 INF: ===================Frame #993=================== 15-12-21 21:01:14.599 -05 000000089 INF: ===================Frame #1005=================== 15-12-21 21:01:14.604 -05 000000056 INF: ===================Frame #1005=================== 15-12-21 21:01:14.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:14.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 21:01:14.750 -05 000000089 INF: ===================Frame #1017=================== 15-12-21 21:01:14.754 -05 000000056 INF: ===================Frame #1017=================== 15-12-21 21:01:14.901 -05 000000089 INF: ===================Frame #1029=================== 15-12-21 21:01:14.904 -05 000000056 INF: ===================Frame #1029=================== 15-12-21 21:01:15.052 -05 000000089 INF: ===================Frame #1041=================== 15-12-21 21:01:15.054 -05 000000056 INF: ===================Frame #1041=================== 15-12-21 21:01:15.205 -05 000000056 INF: ===================Frame #1053=================== 15-12-21 21:01:15.205 -05 000000089 INF: ===================Frame #1053=================== 15-12-21 21:01:15.265 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:15.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:15.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:15.355 -05 000000056 INF: ===================Frame #1065=================== 15-12-21 21:01:15.355 -05 000000089 INF: ===================Frame #1065=================== 15-12-21 21:01:15.392 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:15.412 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:15.412 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:15.505 -05 000000089 INF: ===================Frame #1077=================== 15-12-21 21:01:15.505 -05 000000056 INF: ===================Frame #1077=================== 15-12-21 21:01:15.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:15.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:15.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:15.656 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:15.656 -05 000000089 INF: ===================Frame #1088=================== 15-12-21 21:01:15.657 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 21:01:15.657 -05 000000056 INF: ===================Frame #1088=================== 15-12-21 21:01:16.156 -05 000000056 INF: ===================Frame #1128=================== 15-12-21 21:01:16.165 -05 000000089 INF: ===================Frame #1129=================== 15-12-21 21:01:16.315 -05 000000089 INF: ===================Frame #1141=================== 15-12-21 21:01:16.362 -05 000000056 INF: ===================Frame #1144=================== 15-12-21 21:01:16.465 -05 000000089 INF: ===================Frame #1152=================== 15-12-21 21:01:16.536 -05 000000056 INF: ===================Frame #1158=================== 15-12-21 21:01:16.658 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:16.659 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:16.659 -05 000000057 INF: WaitCommand(5000) end 15-12-21 21:01:16.659 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:16.664 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:16.665 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:16.669 -05 000000086 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:01:16.669 -05 000000084 INF: ===================WaitCommand=================== 15-12-21 21:01:16.669 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:16.674 -05 000000084 INF: WaitCommand(15000) start 15-12-21 21:01:16.679 -05 000000084 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 21:01:16.720 -05 000000056 INF: ===================Frame #1173=================== 15-12-21 21:01:16.733 -05 000000089 INF: ===================Frame #1174=================== 15-12-21 21:01:16.767 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:16.783 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:16.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:16.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:16.870 -05 000000056 INF: ===================Frame #1184=================== 15-12-21 21:01:16.883 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:16.888 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:16.909 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 21:01:16.909 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:16.916 -05 000000089 INF: ===================Frame #1188=================== 15-12-21 21:01:16.970 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:17.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:17.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:17.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:17.060 -05 000000056 INF: ===================Frame #1200=================== 15-12-21 21:01:17.070 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:01:17.086 -05 000000089 INF: ===================Frame #1202=================== 15-12-21 21:01:17.138 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:17.161 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 21:01:17.161 -05 000000086 INF: Current Position of Pump is: 25728 15-12-21 21:01:17.161 -05 000000086 INF: Dispense Steps 48000 is greater than steps to home syringe 25728, reducing number of steps to 25728 15-12-21 21:01:17.162 -05 000000086 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:01:17.162 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.986C:A1\r\n 15-12-21 21:01:17.162 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:17.230 -05 000000056 INF: ===================Frame #1213=================== 15-12-21 21:01:17.256 -05 000000089 INF: ===================Frame #1215=================== 15-12-21 21:01:17.261 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD25728R\r 15-12-21 21:01:17.262 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:17.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:17.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:17.345 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:17.380 -05 000000056 INF: ===================Frame #1225=================== 15-12-21 21:01:17.406 -05 000000089 INF: ===================Frame #1227=================== 15-12-21 21:01:17.445 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:17.531 -05 000000056 INF: ===================Frame #1237=================== 15-12-21 21:01:17.534 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:17.557 -05 000000089 INF: ===================Frame #1239=================== 15-12-21 21:01:17.679 -05 000000084 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 21:01:17.682 -05 000000056 INF: ===================Frame #1249=================== 15-12-21 21:01:17.707 -05 000000089 INF: ===================Frame #1250=================== 15-12-21 21:01:17.719 -05 000000040 INF: FPGA: Recv TDIYWAIT 15-12-21 21:01:17.719 -05 000000060 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:01:17.726 -05 000000060 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:01:17.729 -05 000000038 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:01:17.729 -05 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:01:17.729 -05 000000038 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:01:17.732 -05 000000038 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:01:17.732 -05 000000038 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:01:17.732 -05 000000038 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:01:17.732 -05 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:01:17.732 -05 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:01:17.733 -05 000000045 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:01:17.740 -05 000000045 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:01:17.784 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:17.806 -05 000000089 INF: Camera complete - got 1250 frames. 15-12-21 21:01:17.810 -05 000000089 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:01:17.844 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:17.905 -05 000000055 INF: FPGA: Recv EX1MV 15-12-21 21:01:17.905 -05 000000038 INF: Excitation Filter 1: Moved 36 steps in 172.7148 ms 15-12-21 21:01:17.905 -05 000000038 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 172.8976 ms 15-12-21 21:01:17.905 -05 000000038 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 175.8752 ms 15-12-21 21:01:17.906 -05 000000038 INF: ====================================== 15-12-21 21:01:18.094 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:18.157 -05 000000055 INF: FPGA: Recv EX2MV 15-12-21 21:01:18.157 -05 000000045 INF: Excitation Filter 2: Moved 107 steps in 424.5465 ms 15-12-21 21:01:18.157 -05 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 424.6933 ms 15-12-21 21:01:18.157 -05 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 424.8089 ms 15-12-21 21:01:18.158 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:18.158 -05 000000045 INF: ====================================== 15-12-21 21:01:18.159 -05 000000056 INF: ===================Frame #1250=================== 15-12-21 21:01:18.159 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 21:01:18.160 -05 000000060 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:01:18.165 -05 000000060 INF: ====================================== 15-12-21 21:01:18.187 -05 000000089 INF: ====================================== 15-12-21 21:01:18.228 -05 000000056 INF: Camera complete - got 1250 frames. 15-12-21 21:01:18.229 -05 000000056 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:01:18.345 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 21:01:18.378 -05 000000056 INF: ====================================== 15-12-21 21:01:18.386 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 21:01:18.387 -05 000000037 INF: ====================================== 15-12-21 21:01:18.416 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:18.472 -05 000000041 INF: Y Motor: Moved to 9.0765 after 16894 ms 15-12-21 21:01:18.479 -05 000000041 INF: ====================================== 15-12-21 21:01:18.496 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:18.498 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:18.503 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:18.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:18.510 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:01:18.547 -05 000000038 INF: FPGA: Recv TDICLINES 9521 15-12-21 21:01:18.547 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:01:18.566 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:18.654 -05 000000040 INF: FPGA: Recv TDIYERD 907648 15-12-21 21:01:18.654 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 21:01:18.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:18.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:18.693 -05 000000084 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 21:01:18.725 -05 000000041 INF: FPGA: Recv ZADCR 25259 15-12-21 21:01:18.750 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.096. Y moved -60.304 mm 15-12-21 21:01:18.750 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:01:18.750 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:18.769 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:18.793 -05 000000040 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:01:18.793 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:01:18.818 -05 000000062 INF: TDIScan finished after 22012.0752 ms 15-12-21 21:01:18.818 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:01:18.818 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:01:18.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:18.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:18.846 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:18.926 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:18.957 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:18.965 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.917 um 15-12-21 21:01:18.965 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:18.970 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:18.977 -05 000000023 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:01:18.977 -05 000000060 INF: ===================Dither Clean Up Command=================== 15-12-21 21:01:18.978 -05 000000055 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:01:18.978 -05 000000041 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:01:18.979 -05 000000023 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:01:18.979 -05 000000041 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:01:18.979 -05 000000041 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:01:18.982 -05 000000037 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:01:18.983 -05 000000056 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:01:18.983 -05 000000037 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:01:18.984 -05 000000056 INF: ===================LFT:Extracting coords=================== 15-12-21 21:01:19.015 -05 000000023 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:01:19.016 -05 000000023 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:01:19.016 -05 000000055 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:01:19.016 -05 000000023 INF: ====================================== 15-12-21 21:01:19.030 -05 000000040 INF: FPGA: Recv ZSTEP 15-12-21 21:01:19.030 -05 000000040 INF: FPGA: Recv ZSEL 15-12-21 21:01:19.030 -05 000000037 INF: FPGA: Xmit ZDACW 31778\n 15-12-21 21:01:19.032 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:19.032 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:19.032 -05 000000056 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:01:19.033 -05 000000041 INF: ====================================== 15-12-21 21:01:19.033 -05 000000056 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:01:19.034 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:19.035 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:01:19.035 -05 000000089 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:19.035 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:19.035 -05 000000089 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:01:19.035 -05 000000023 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:01:19.038 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:19.038 -05 000000092 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:01:19.079 -05 000000055 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:01:19.080 -05 000000055 INF: ====================================== 15-12-21 21:01:19.091 -05 000000041 INF: FPGA: Recv ZDACW 15-12-21 21:01:19.091 -05 000000037 INF: ====================================== 15-12-21 21:01:19.157 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:19.219 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:19.231 -05 000000089 INF: LFT found best fwhm score 2.479187 in 152 ms 15-12-21 21:01:19.231 -05 000000089 INF: LFT found good score at index 1721 with fwhm value 2.479187. Next cycle, cycle 26 starting Z position for bottom surface is at -0.103 mm FC:B, C:25,L:1,B 15-12-21 21:01:19.232 -05 000000089 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:19.232 -05 000000089 INF: ====================================== 15-12-21 21:01:19.232 -05 000000023 INF: LFT found best fwhm score 2.554046 in 152 ms 15-12-21 21:01:19.232 -05 000000023 INF: LFT found good score at index 6797 with fwhm value 2.554046. Next cycle, cycle 26 starting Z position for bottom surface is at -0.101 mm FC:B, C:25,L:1,B 15-12-21 21:01:19.232 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:19.233 -05 000000023 INF: ====================================== 15-12-21 21:01:19.261 -05 000000092 INF: LFT found best fwhm score 2.296087 in 179 ms 15-12-21 21:01:19.261 -05 000000092 INF: LFT found good score at index 8037 with fwhm value 2.296087. Next cycle, cycle 26 starting Z position for bottom surface is at -0.101 mm FC:B, C:25,L:1,B 15-12-21 21:01:19.261 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:19.262 -05 000000092 INF: ====================================== 15-12-21 21:01:19.267 -05 000000045 INF: LFT found best fwhm score 2.490595 in 189 ms 15-12-21 21:01:19.267 -05 000000045 INF: LFT found good score at index 6077 with fwhm value 2.490595. Next cycle, cycle 26 starting Z position for bottom surface is at -0.102 mm FC:B, C:25,L:1,B 15-12-21 21:01:19.267 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:19.267 -05 000000045 INF: ====================================== 15-12-21 21:01:19.269 -05 000000056 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:01:19.270 -05 000000056 INF: LFT weighted average best Z for bottom surface is at -0.102mm FC:B, C:25,L:1,B 15-12-21 21:01:19.271 -05 000000056 INF: ====================================== 15-12-21 21:01:19.272 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:19.273 -05 000000060 INF: ====================================== 15-12-21 21:01:19.274 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:19.278 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:01:19.278 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:19.278 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:01:19.278 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:19.279 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:01:19.279 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:19.279 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:01:19.279 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:19.280 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 21:01:19.281 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 21:01:19.282 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Waiting for image analysis, Dispensing port PortC, Delay 13 of 15 seconds left=================== 15-12-21 21:01:19.282 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Dispensing port PortC, Delay 13 of 15 seconds left=================== 15-12-21 21:01:19.282 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:01:19.282 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 21:01:19.282 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:01:19.282 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:01:19.283 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:19.283 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:01:19.283 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:01:19.289 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:01:19.290 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface=================== 15-12-21 21:01:19.323 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:01:19.324 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:01:19.325 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:01:19.332 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:01:19.333 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:01:19.333 -05 000000062 INF: Compensator: Remaining OutOfPath 15-12-21 21:01:19.349 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:01:19.385 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.808C:A1\r\n 15-12-21 21:01:19.385 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:19.388 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:01:19.403 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 21:01:19.404 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 21:01:19.588 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:19.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:19.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:01:19.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:19.592 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -121.2 um, section = B_1 15-12-21 21:01:19.625 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:01:19.629 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:01:19.633 -05 000000045 INF: ===================MoveEmissionFilters=================== 15-12-21 21:01:19.634 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:01:19.634 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 21:01:19.634 -05 000000038 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:01:19.635 -05 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:01:19.635 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:01:19.635 -05 000000041 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:01:19.641 -05 000000038 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:01:19.641 -05 000000055 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:01:19.641 -05 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:01:19.641 -05 000000023 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:01:19.641 -05 000000023 INF: Z Motor: Moving to -0.1188 mm, started at -0.1212 mm 15-12-21 21:01:19.641 -05 000000023 INF: FPGA: Xmit ZTRG 0\n 15-12-21 21:01:19.642 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:19.643 -05 000000041 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:01:19.643 -05 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:01:19.643 -05 000000037 INF: ===================Move X Motor without settling=================== 15-12-21 21:01:19.643 -05 000000040 INF: ===================Move Y Motor without settling=================== 15-12-21 21:01:19.643 -05 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:01:19.644 -05 000000037 INF: X Motor: Xmit PR VM\n 15-12-21 21:01:19.644 -05 000000040 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 21:01:19.644 -05 000000040 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:01:19.644 -05 000000089 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:01:19.644 -05 000000089 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:01:19.645 -05 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:01:19.645 -05 000000092 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:01:19.645 -05 000000089 INF: ====================================== 15-12-21 21:01:19.645 -05 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:01:19.645 -05 000000078 INF: ====================================== 15-12-21 21:01:19.646 -05 000000029 INF: ====================================== 15-12-21 21:01:19.647 -05 000000040 INF: Y Motor: Xmit 1G\n 15-12-21 21:01:19.652 -05 000000092 INF: ====================================== 15-12-21 21:01:19.653 -05 000000038 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:01:19.660 -05 000000029 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:01:19.661 -05 000000089 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:01:19.661 -05 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:01:19.661 -05 000000029 INF: ====================================== 15-12-21 21:01:19.661 -05 000000089 INF: ====================================== 15-12-21 21:01:19.662 -05 000000078 INF: ====================================== 15-12-21 21:01:19.662 -05 000000041 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:01:19.665 -05 000000038 INF: ====================================== 15-12-21 21:01:19.675 -05 000000092 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:01:19.676 -05 000000060 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:01:19.676 -05 000000068 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203=================== 15-12-21 21:01:19.676 -05 000000079 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203=================== 15-12-21 21:01:19.676 -05 000000063 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204=================== 15-12-21 21:01:19.676 -05 000000092 INF: ====================================== 15-12-21 21:01:19.676 -05 000000028 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2205=================== 15-12-21 21:01:19.677 -05 000000009 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2205, Registering and Extracting C025 L001 T2206=================== 15-12-21 21:01:19.685 -05 000000054 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203=================== 15-12-21 21:01:19.685 -05 000000041 INF: ====================================== 15-12-21 21:01:19.685 -05 000000048 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2205, Registering and Extracting C025 L001 T2206, Registering and Extracting C025 L001 T2207, Registering and Extracting C025 L001 T2208=================== 15-12-21 21:01:19.685 -05 000000051 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2205, Registering and Extracting C025 L001 T2206, Registering and Extracting C025 L001 T2207, Registering and Extracting C025 L001 T2208=================== 15-12-21 21:01:19.695 -05 000000084 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 21:01:19.712 -05 000000029 INF: FPGA: Recv ZTRG 15-12-21 21:01:19.712 -05 000000060 INF: ====================================== 15-12-21 21:01:19.712 -05 000000023 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 21:01:19.718 -05 000000040 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:01:19.719 -05 000000037 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:01:19.719 -05 000000037 INF: X Motor: Xmit PR VI\n 15-12-21 21:01:19.719 -05 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:01:19.719 -05 000000040 INF: Y Motor: Recv 1G\r\n 15-12-21 21:01:19.720 -05 000000040 INF: Y Motor: Xmit 1D\n 15-12-21 21:01:19.725 -05 000000056 INF: ====================================== 15-12-21 21:01:19.729 -05 000000045 INF: ====================================== 15-12-21 21:01:19.771 -05 000000038 INF: FPGA: Recv ZYT 15-12-21 21:01:19.771 -05 000000023 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 21:01:19.772 -05 000000040 INF: Y Motor: Recv 1D\r\n 15-12-21 21:01:19.772 -05 000000023 INF: FPGA: Xmit ZMV 31134\n 15-12-21 21:01:19.775 -05 000000037 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:01:19.775 -05 000000037 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:01:19.775 -05 000000037 INF: X Motor: Moving to 80.2570 mm @15.000 mm/sec, started at 76.7344 mm 15-12-21 21:01:19.776 -05 000000037 INF: X Motor: Xmit MA 8707\n 15-12-21 21:01:19.779 -05 000000040 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:01:19.783 -05 000000040 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:01:19.824 -05 000000060 INF: FPGA: Recv ZMV 15-12-21 21:01:19.824 -05 000000023 INF: Z Motor: MoveAndTrigger 'ZMV' command took 52.9488 ms 15-12-21 21:01:19.825 -05 000000023 INF: FPGA: Xmit ZDACR\n 15-12-21 21:01:19.826 -05 000000037 INF: X Motor: Recv MA 8707\r\n> 15-12-21 21:01:19.826 -05 000000037 INF: X Motor: WaitUntilStopped 60235 15-12-21 21:01:19.886 -05 000000041 INF: FPGA: Recv ZDACR 31134 15-12-21 21:01:19.887 -05 000000023 INF: Z Motor: MoveAndTrigger took 245.3753 ms w/comms 15-12-21 21:01:19.887 -05 000000023 INF: Z Motor: After move to -0.1188, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:01:19.887 -05 000000023 INF: Z Motor: MoveAbsStepped took 245.4835 ms 15-12-21 21:01:19.887 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:01:19.902 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:19.926 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:01:19.928 -05 000000045 INF: ===================TDI Scan Setup=================== 15-12-21 21:01:19.928 -05 000000092 INF: ===================Camera Arm TDI=================== 15-12-21 21:01:19.967 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:19.991 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:19.992 -05 000000045 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:01:19.992 -05 000000045 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:01:19.993 -05 000000045 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:01:20.029 -05 000000038 INF: FPGA: Recv ZSEL 15-12-21 21:01:20.030 -05 000000045 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:01:20.031 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:20.038 -05 000000045 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:01:20.038 -05 000000045 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:01:20.038 -05 000000045 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:01:20.091 -05 000000038 INF: FPGA: Recv ZSTEP 15-12-21 21:01:20.092 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:20.098 -05 000000045 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:01:20.099 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:20.121 -05 000000045 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:01:20.121 -05 000000045 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:01:20.121 -05 000000045 INF: Z Motor: Arming to move to -0.0788 mm 15-12-21 21:01:20.121 -05 000000045 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:01:20.154 -05 000000029 INF: FPGA: Recv ZYT 15-12-21 21:01:20.155 -05 000000045 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907645 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:01:20.155 -05 000000045 INF: FPGA: Xmit ZARM 20648\n 15-12-21 21:01:20.215 -05 000000041 INF: FPGA: Recv ZARM 15-12-21 21:01:20.215 -05 000000045 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 60.171 ms 15-12-21 21:01:20.215 -05 000000045 INF: Z Motor: ArmAbsStepped took 93.5996 ms 15-12-21 21:01:20.216 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:20.219 -05 000000045 INF: ===================TDI Scan Setup=================== 15-12-21 21:01:20.248 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:20.282 -05 000000045 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:01:20.284 -05 000000045 INF: ===================TDI Scan Setup=================== 15-12-21 21:01:20.295 -05 000000045 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:01:20.298 -05 000000045 INF: ===================TDI Scan Setup=================== 15-12-21 21:01:20.304 -05 000000045 INF: ====================================== 15-12-21 21:01:20.408 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:20.447 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:20.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:20.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:20.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:20.625 -05 000000037 INF: X Motor: Xmit PR ER\n 15-12-21 21:01:20.676 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:20.686 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:20.686 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:20.689 -05 000000037 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:01:20.689 -05 000000037 INF: X Motor: Moved to 80.2573 after 863 ms 15-12-21 21:01:20.690 -05 000000037 INF: ====================================== 15-12-21 21:01:20.712 -05 000000084 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 21:01:20.755 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:20.802 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:20.873 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:20.873 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:21.005 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:21.057 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:21.058 -05 000000086 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:01:21.059 -05 000000086 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 21:01:21.159 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 21:01:21.267 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:21.389 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:21.450 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:21.700 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:21.733 -05 000000084 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 21:01:21.760 -05 000000086 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:21.761 -05 000000086 INF: ====================================== 15-12-21 21:01:21.999 -05 000000092 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:01:21.999 -05 000000092 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:01:22.000 -05 000000092 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:01:22.015 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:22.349 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:22.407 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.980C:A1\r\n 15-12-21 21:01:22.407 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:22.554 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:22.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:22.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:22.734 -05 000000084 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 21:01:22.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:22.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:22.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:22.886 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:22.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:22.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:23.464 -05 000000040 INF: Y Motor: Moved to 70.6885 after 3680 ms 15-12-21 21:01:23.465 -05 000000040 INF: ====================================== 15-12-21 21:01:23.468 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 21:01:23.475 -05 000000055 INF: ====================================== 15-12-21 21:01:23.683 -05 000000092 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:01:23.683 -05 000000092 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:01:23.683 -05 000000092 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:01:23.685 -05 000000092 INF: ====================================== 15-12-21 21:01:23.690 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:01:23.695 -05 000000023 INF: ====================================== 15-12-21 21:01:23.696 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:01:23.701 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:23.704 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:01:23.734 -05 000000084 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 21:01:23.775 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:01:23.776 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:01:23.836 -05 000000045 INF: FPGA: Recv ZFREQCL 15-12-21 21:01:23.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:01:23.838 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:23.838 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:01:23.898 -05 000000040 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:01:23.898 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:01:23.899 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:23.900 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:23.905 -05 000000037 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:01:23.905 -05 000000086 INF: ===================TDI FPGA Arm=================== 15-12-21 21:01:23.905 -05 000000037 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:01:23.910 -05 000000086 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:23.914 -05 000000086 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:01:23.914 -05 000000086 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:01:23.960 -05 000000092 INF: FPGA: Recv TDIYPOS 15-12-21 21:01:23.960 -05 000000086 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:23.961 -05 000000037 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:01:23.965 -05 000000037 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:01:23.966 -05 000000037 INF: ====================================== 15-12-21 21:01:23.966 -05 000000086 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:01:23.966 -05 000000086 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:01:24.024 -05 000000040 INF: FPGA: Recv TDIYARM3 15-12-21 21:01:24.024 -05 000000086 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:24.029 -05 000000086 INF: ===================TDI FPGA Arm=================== 15-12-21 21:01:24.031 -05 000000086 INF: ====================================== 15-12-21 21:01:24.035 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:24.036 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:24.036 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:24.040 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:24.047 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:24.049 -05 000000045 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:01:24.049 -05 000000038 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:01:24.049 -05 000000045 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:01:24.049 -05 000000045 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:01:24.049 -05 000000045 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:01:24.049 -05 000000038 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:01:24.049 -05 000000038 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:01:24.049 -05 000000038 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:01:24.050 -05 000000045 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:01:24.059 -05 000000038 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:01:24.188 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:24.209 -05 000000023 INF: FPGA: Recv EX1MV 15-12-21 21:01:24.209 -05 000000038 INF: Excitation Filter 1: Moved -36 steps in 160.0597 ms 15-12-21 21:01:24.209 -05 000000038 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 160.185 ms 15-12-21 21:01:24.209 -05 000000038 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 160.2767 ms 15-12-21 21:01:24.210 -05 000000038 INF: ====================================== 15-12-21 21:01:24.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:24.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:24.317 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:24.335 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:24.335 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:24.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:24.460 -05 000000040 INF: FPGA: Recv EX2MV 15-12-21 21:01:24.460 -05 000000045 INF: Excitation Filter 2: Moved -107 steps in 410.8706 ms 15-12-21 21:01:24.460 -05 000000045 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 411.0496 ms 15-12-21 21:01:24.460 -05 000000045 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 411.1477 ms 15-12-21 21:01:24.461 -05 000000045 INF: ====================================== 15-12-21 21:01:24.462 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:24.462 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:24.463 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:24.468 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:24.470 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 21:01:24.470 -05 000000037 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:01:24.470 -05 000000056 INF: ===================FPGA Z Wait=================== 15-12-21 21:01:24.473 -05 000000092 INF: ===================Move Y Motor without settling=================== 15-12-21 21:01:24.474 -05 000000056 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:01:24.474 -05 000000092 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:01:24.474 -05 000000092 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:01:24.479 -05 000000041 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:01:24.479 -05 000000037 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:01:24.487 -05 000000055 INF: ===================Camera TDI=================== 15-12-21 21:01:24.491 -05 000000086 INF: ===================Camera TDI=================== 15-12-21 21:01:24.507 -05 000000092 INF: Y Motor: Xmit 1G\n 15-12-21 21:01:24.511 -05 000000037 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:01:24.585 -05 000000092 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:01:24.586 -05 000000092 INF: Y Motor: Recv 1G\r\n 15-12-21 21:01:24.587 -05 000000092 INF: Y Motor: Xmit 1D\n 15-12-21 21:01:24.649 -05 000000092 INF: Y Motor: Recv 1D\r\n 15-12-21 21:01:24.650 -05 000000092 INF: Y Motor: Recv *407662\r\n 15-12-21 21:01:24.651 -05 000000092 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:01:24.735 -05 000000084 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 21:01:24.768 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:24.776 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.022C:A1\r\n 15-12-21 21:01:24.776 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:24.833 -05 000000023 INF: FPGA: Recv ZWAIT 15-12-21 21:01:24.834 -05 000000056 INF: ====================================== 15-12-21 21:01:25.129 -05 000000055 INF: ===================Frame #13=================== 15-12-21 21:01:25.130 -05 000000086 INF: ===================Frame #13=================== 15-12-21 21:01:25.281 -05 000000086 INF: ===================Frame #26=================== 15-12-21 21:01:25.285 -05 000000055 INF: ===================Frame #26=================== 15-12-21 21:01:25.599 -05 000000068 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2205, Registering and Extracting C025 L001 T2206, Registering and Extracting C025 L001 T2207=================== 15-12-21 21:01:25.602 -05 000000079 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2205, Registering and Extracting C025 L001 T2206=================== 15-12-21 21:01:25.602 -05 000000054 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2205=================== 15-12-21 21:01:25.628 -05 000000028 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204=================== 15-12-21 21:01:25.647 -05 000000055 INF: ===================Frame #55=================== 15-12-21 21:01:25.647 -05 000000086 INF: ===================Frame #54=================== 15-12-21 21:01:25.677 -05 000000031 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2210, Registering and Extracting C025 L001 T2211, Registering and Extracting C025 L001 T2212=================== 15-12-21 21:01:25.677 -05 000000088 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2210, Registering and Extracting C025 L001 T2211, Registering and Extracting C025 L001 T2212=================== 15-12-21 21:01:25.677 -05 000000027 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2210, Registering and Extracting C025 L001 T2211, Registering and Extracting C025 L001 T2212=================== 15-12-21 21:01:25.677 -05 000000072 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2210, Registering and Extracting C025 L001 T2211, Registering and Extracting C025 L001 T2212=================== 15-12-21 21:01:25.716 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:25.735 -05 000000084 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 21:01:25.740 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:25.740 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:25.798 -05 000000055 INF: ===================Frame #66=================== 15-12-21 21:01:25.843 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:25.864 -05 000000086 INF: ===================Frame #72=================== 15-12-21 21:01:25.865 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:25.865 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:25.965 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:25.989 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:25.989 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:26.096 -05 000000086 INF: ===================Frame #90=================== 15-12-21 21:01:26.106 -05 000000055 INF: ===================Frame #91=================== 15-12-21 21:01:26.184 -05 000000048 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2210, Registering and Extracting C025 L001 T2211=================== 15-12-21 21:01:26.257 -05 000000055 INF: ===================Frame #103=================== 15-12-21 21:01:26.277 -05 000000044 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2210, Registering and Extracting C025 L001 T2211, Registering and Extracting C025 L001 T2213=================== 15-12-21 21:01:26.312 -05 000000063 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2210, Registering and Extracting C025 L001 T2211=================== 15-12-21 21:01:26.325 -05 000000009 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2210=================== 15-12-21 21:01:26.327 -05 000000051 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209=================== 15-12-21 21:01:26.346 -05 000000086 INF: ===================Frame #110=================== 15-12-21 21:01:26.376 -05 000000020 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2214=================== 15-12-21 21:01:26.377 -05 000000034 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2214, Registering and Extracting C025 L001 T2215=================== 15-12-21 21:01:26.377 -05 000000082 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2214, Registering and Extracting C025 L001 T2215, Registering and Extracting C025 L001 T2216=================== 15-12-21 21:01:26.452 -05 000000055 INF: ===================Frame #118=================== 15-12-21 21:01:26.737 -05 000000084 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 21:01:26.766 -05 000000086 INF: ===================Frame #143=================== 15-12-21 21:01:26.917 -05 000000086 INF: ===================Frame #155=================== 15-12-21 21:01:27.068 -05 000000086 INF: ===================Frame #167=================== 15-12-21 21:01:27.099 -05 000000055 INF: ===================Frame #169=================== 15-12-21 21:01:27.219 -05 000000086 INF: ===================Frame #179=================== 15-12-21 21:01:27.248 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:27.249 -05 000000055 INF: ===================Frame #181=================== 15-12-21 21:01:27.317 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 21:01:27.317 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:27.370 -05 000000086 INF: ===================Frame #191=================== 15-12-21 21:01:27.405 -05 000000055 INF: ===================Frame #194=================== 15-12-21 21:01:27.433 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:27.530 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:27.530 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:27.530 -05 000000086 INF: ===================Frame #203=================== 15-12-21 21:01:27.668 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:27.680 -05 000000086 INF: ===================Frame #215=================== 15-12-21 21:01:27.707 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.997C:A1\r\n 15-12-21 21:01:27.707 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:27.738 -05 000000084 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 21:01:27.833 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:27.836 -05 000000086 INF: ===================Frame #228=================== 15-12-21 21:01:27.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:27.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:28.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:28.096 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:28.096 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:28.344 -05 000000055 INF: ===================Frame #268=================== 15-12-21 21:01:28.739 -05 000000084 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 21:01:29.357 -05 000000055 INF: ===================Frame #348=================== 15-12-21 21:01:29.389 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:29.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:29.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:29.436 -05 000000086 INF: ===================Frame #354=================== 15-12-21 21:01:29.513 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:29.543 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:29.543 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:29.646 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:29.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:29.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:29.740 -05 000000084 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 21:01:29.950 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:29.966 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.132C:A1\r\n 15-12-21 21:01:29.966 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:30.002 -05 000000055 INF: ===================Frame #399=================== 15-12-21 21:01:30.153 -05 000000055 INF: ===================Frame #411=================== 15-12-21 21:01:30.182 -05 000000086 INF: ===================Frame #413=================== 15-12-21 21:01:30.304 -05 000000055 INF: ===================Frame #423=================== 15-12-21 21:01:30.333 -05 000000086 INF: ===================Frame #425=================== 15-12-21 21:01:30.455 -05 000000055 INF: ===================Frame #435=================== 15-12-21 21:01:30.484 -05 000000086 INF: ===================Frame #437=================== 15-12-21 21:01:30.605 -05 000000055 INF: ===================Frame #447=================== 15-12-21 21:01:30.634 -05 000000086 INF: ===================Frame #449=================== 15-12-21 21:01:30.648 -05 000000027 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2214, Registering and Extracting C025 L001 T2215=================== 15-12-21 21:01:30.740 -05 000000084 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 21:01:30.756 -05 000000055 INF: ===================Frame #459=================== 15-12-21 21:01:30.784 -05 000000086 INF: ===================Frame #461=================== 15-12-21 21:01:30.880 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:30.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:30.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:30.907 -05 000000055 INF: ===================Frame #470=================== 15-12-21 21:01:30.935 -05 000000086 INF: ===================Frame #473=================== 15-12-21 21:01:31.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:31.027 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:31.027 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:31.034 -05 000000088 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209, Registering and Extracting C025 L001 T2214=================== 15-12-21 21:01:31.086 -05 000000086 INF: ===================Frame #485=================== 15-12-21 21:01:31.136 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:31.215 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:31.215 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:31.237 -05 000000086 INF: ===================Frame #496=================== 15-12-21 21:01:31.333 -05 000000055 INF: ===================Frame #504=================== 15-12-21 21:01:31.578 -05 000000055 INF: ===================Frame #523=================== 15-12-21 21:01:31.676 -05 000000084 INF: ===================WaitCommand=================== 15-12-21 21:01:31.676 -05 000000084 INF: WaitCommand(15000) end 15-12-21 21:01:31.677 -05 000000084 INF: ====================================== 15-12-21 21:01:31.678 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:31.681 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:31.685 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:31.685 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:31.709 -05 000000086 INF: ===================Frame #533=================== 15-12-21 21:01:31.723 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:31.724 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 21:01:31.726 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:31.726 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 21:01:31.726 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:31.731 -05 000000055 INF: ===================Frame #535=================== 15-12-21 21:01:31.779 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:01:31.779 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:31.931 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 21:01:31.932 -05 000000055 INF: ===================Frame #551=================== 15-12-21 21:01:31.934 -05 000000086 INF: ===================Frame #547=================== 15-12-21 21:01:31.951 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:01:31.951 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:32.050 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:32.153 -05 000000086 INF: ===================Frame #568=================== 15-12-21 21:01:32.153 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:01:32.153 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:32.154 -05 000000055 INF: ===================Frame #568=================== 15-12-21 21:01:32.258 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:32.259 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 21:01:32.259 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:32.340 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:32.355 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 120, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:01:32.441 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:01:32.488 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:32.490 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 21:01:32.490 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 21:01:32.491 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 21:01:32.504 -05 000000055 INF: ===================Frame #597=================== 15-12-21 21:01:32.511 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 21:01:32.511 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:32.519 -05 000000086 INF: ===================Frame #598=================== 15-12-21 21:01:32.590 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P23040R\r 15-12-21 21:01:32.607 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:32.613 -05 000000031 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204, Registering and Extracting C025 L001 T2209=================== 15-12-21 21:01:32.636 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:32.636 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:32.654 -05 000000055 INF: ===================Frame #609=================== 15-12-21 21:01:32.671 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:32.710 -05 000000086 INF: ===================Frame #613=================== 15-12-21 21:01:32.737 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:32.762 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:32.762 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:32.771 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:32.804 -05 000000055 INF: ===================Frame #620=================== 15-12-21 21:01:32.863 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:32.864 -05 000000086 INF: ===================Frame #625=================== 15-12-21 21:01:32.866 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:32.886 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.025C:A1\r\n 15-12-21 21:01:32.886 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:32.987 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:33.010 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:33.010 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:33.014 -05 000000086 INF: ===================Frame #637=================== 15-12-21 21:01:33.056 -05 000000055 INF: ===================Frame #640=================== 15-12-21 21:01:33.117 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:33.166 -05 000000086 INF: ===================Frame #649=================== 15-12-21 21:01:33.180 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:33.241 -05 000000055 INF: ===================Frame #655=================== 15-12-21 21:01:33.294 -05 000000072 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203, Registering and Extracting C025 L001 T2204=================== 15-12-21 21:01:33.318 -05 000000086 INF: ===================Frame #661=================== 15-12-21 21:01:33.391 -05 000000055 INF: ===================Frame #667=================== 15-12-21 21:01:33.411 -05 000000020 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202, Registering and Extracting C025 L001 T2203=================== 15-12-21 21:01:33.430 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:33.471 -05 000000086 INF: ===================Frame #673=================== 15-12-21 21:01:33.473 -05 000000044 INF: ===================Registering and Extracting C025 L001 T2201, Registering and Extracting C025 L001 T2202=================== 15-12-21 21:01:33.494 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:33.509 -05 000000034 INF: ===================Registering and Extracting C025 L001 T2201=================== 15-12-21 21:01:33.528 -05 000000082 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:01:33.541 -05 000000055 INF: ===================Frame #679=================== 15-12-21 21:01:33.560 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:33.572 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:01:33.621 -05 000000086 INF: ===================Frame #685=================== 15-12-21 21:01:33.684 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:33.691 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:01:33.694 -05 000000055 INF: ===================Frame #691=================== 15-12-21 21:01:33.744 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:33.771 -05 000000086 INF: ===================Frame #697=================== 15-12-21 21:01:33.803 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:33.806 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:33.811 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:01:33.845 -05 000000055 INF: ===================Frame #703=================== 15-12-21 21:01:33.922 -05 000000086 INF: ===================Frame #709=================== 15-12-21 21:01:33.939 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:33.948 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:01:33.998 -05 000000055 INF: ===================Frame #715=================== 15-12-21 21:01:34.052 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:34.056 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:34.073 -05 000000086 INF: ===================Frame #721=================== 15-12-21 21:01:34.118 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:34.149 -05 000000055 INF: ===================Frame #727=================== 15-12-21 21:01:34.223 -05 000000086 INF: ===================Frame #733=================== 15-12-21 21:01:34.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:34.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:34.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:34.300 -05 000000055 INF: ===================Frame #739=================== 15-12-21 21:01:34.361 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:34.368 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:34.373 -05 000000086 INF: ===================Frame #744=================== 15-12-21 21:01:34.384 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:34.384 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:34.430 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:34.451 -05 000000055 INF: ===================Frame #751=================== 15-12-21 21:01:34.488 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:34.508 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:34.508 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:34.602 -05 000000055 INF: ===================Frame #763=================== 15-12-21 21:01:34.680 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:34.741 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:34.756 -05 000000055 INF: ===================Frame #775=================== 15-12-21 21:01:34.908 -05 000000055 INF: ===================Frame #787=================== 15-12-21 21:01:34.925 -05 000000086 INF: ===================Frame #788=================== 15-12-21 21:01:34.992 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:35.052 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:35.058 -05 000000055 INF: ===================Frame #799=================== 15-12-21 21:01:35.078 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:35.131 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.068C:A1\r\n 15-12-21 21:01:35.131 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:35.210 -05 000000055 INF: ===================Frame #811=================== 15-12-21 21:01:35.219 -05 000000086 INF: ===================Frame #811=================== 15-12-21 21:01:35.302 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:35.334 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 21:01:35.360 -05 000000055 INF: ===================Frame #822=================== 15-12-21 21:01:35.366 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:35.369 -05 000000086 INF: ===================Frame #823=================== 15-12-21 21:01:35.520 -05 000000086 INF: ===================Frame #835=================== 15-12-21 21:01:35.616 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:35.670 -05 000000086 INF: ===================Frame #847=================== 15-12-21 21:01:35.678 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:35.732 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:35.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:35.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:35.821 -05 000000086 INF: ===================Frame #859=================== 15-12-21 21:01:35.837 -05 000000055 INF: ===================Frame #860=================== 15-12-21 21:01:35.857 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:35.882 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:35.882 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:35.928 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:35.973 -05 000000086 INF: ===================Frame #871=================== 15-12-21 21:01:35.985 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:35.988 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:36.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:36.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:36.080 -05 000000055 INF: ===================Frame #879=================== 15-12-21 21:01:36.123 -05 000000086 INF: ===================Frame #883=================== 15-12-21 21:01:36.231 -05 000000055 INF: ===================Frame #891=================== 15-12-21 21:01:36.238 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:36.273 -05 000000086 INF: ===================Frame #895=================== 15-12-21 21:01:36.301 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:36.382 -05 000000055 INF: ===================Frame #903=================== 15-12-21 21:01:36.423 -05 000000086 INF: ===================Frame #907=================== 15-12-21 21:01:36.532 -05 000000055 INF: ===================Frame #915=================== 15-12-21 21:01:36.551 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:36.573 -05 000000086 INF: ===================Frame #918=================== 15-12-21 21:01:36.614 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:36.683 -05 000000055 INF: ===================Frame #927=================== 15-12-21 21:01:36.835 -05 000000055 INF: ===================Frame #939=================== 15-12-21 21:01:36.864 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:36.924 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:36.988 -05 000000055 INF: ===================Frame #951=================== 15-12-21 21:01:37.009 -05 000000086 INF: ===================Frame #953=================== 15-12-21 21:01:37.138 -05 000000055 INF: ===================Frame #963=================== 15-12-21 21:01:37.159 -05 000000086 INF: ===================Frame #965=================== 15-12-21 21:01:37.174 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:37.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:37.238 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:37.256 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:37.256 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:37.289 -05 000000055 INF: ===================Frame #975=================== 15-12-21 21:01:37.309 -05 000000086 INF: ===================Frame #977=================== 15-12-21 21:01:37.356 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:37.378 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:37.378 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:37.440 -05 000000055 INF: ===================Frame #987=================== 15-12-21 21:01:37.459 -05 000000086 INF: ===================Frame #988=================== 15-12-21 21:01:37.481 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:37.488 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:37.504 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:37.506 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:37.550 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:37.592 -05 000000055 INF: ===================Frame #999=================== 15-12-21 21:01:37.609 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:37.627 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 21:01:37.627 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:37.742 -05 000000055 INF: ===================Frame #1011=================== 15-12-21 21:01:37.754 -05 000000086 INF: ===================Frame #1012=================== 15-12-21 21:01:37.800 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:37.862 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:37.893 -05 000000055 INF: ===================Frame #1023=================== 15-12-21 21:01:37.951 -05 000000086 INF: ===================Frame #1027=================== 15-12-21 21:01:37.987 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:38.044 -05 000000055 INF: ===================Frame #1035=================== 15-12-21 21:01:38.066 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.988C:A1\r\n 15-12-21 21:01:38.066 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:38.101 -05 000000086 INF: ===================Frame #1039=================== 15-12-21 21:01:38.112 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:38.175 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:38.175 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 21:01:38.194 -05 000000055 INF: ===================Frame #1047=================== 15-12-21 21:01:38.253 -05 000000086 INF: ===================Frame #1051=================== 15-12-21 21:01:38.275 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:01:38.344 -05 000000055 INF: ===================Frame #1058=================== 15-12-21 21:01:38.360 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 21:01:38.360 -05 000000057 INF: Current Position of Pump is: 23040 15-12-21 21:01:38.360 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:01:38.403 -05 000000086 INF: ===================Frame #1063=================== 15-12-21 21:01:38.460 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 21:01:38.546 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:38.554 -05 000000086 INF: ===================Frame #1075=================== 15-12-21 21:01:38.646 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:38.672 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:38.705 -05 000000086 INF: ===================Frame #1087=================== 15-12-21 21:01:38.741 -05 000000055 INF: ===================Frame #1090=================== 15-12-21 21:01:38.792 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:38.812 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:38.812 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:38.857 -05 000000086 INF: ===================Frame #1099=================== 15-12-21 21:01:38.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:38.922 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:38.932 -05 000000055 INF: ===================Frame #1105=================== 15-12-21 21:01:38.940 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:38.940 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:38.983 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:38.983 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:38.983 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 21:01:39.007 -05 000000086 INF: ===================Frame #1111=================== 15-12-21 21:01:39.047 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:39.064 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:01:39.064 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:39.083 -05 000000055 INF: ===================Frame #1117=================== 15-12-21 21:01:39.157 -05 000000086 INF: ===================Frame #1123=================== 15-12-21 21:01:39.167 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:39.233 -05 000000055 INF: ===================Frame #1129=================== 15-12-21 21:01:39.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:39.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:39.308 -05 000000086 INF: ===================Frame #1135=================== 15-12-21 21:01:39.349 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 21:01:39.375 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:01:39.375 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:39.384 -05 000000055 INF: ===================Frame #1141=================== 15-12-21 21:01:39.459 -05 000000086 INF: ===================Frame #1147=================== 15-12-21 21:01:39.477 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:39.499 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:01:39.499 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:39.535 -05 000000055 INF: ===================Frame #1153=================== 15-12-21 21:01:39.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:39.603 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:39.604 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:39.604 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:39.606 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:39.606 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°=================== 15-12-21 21:01:39.606 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:20.00\r 15-12-21 21:01:39.611 -05 000000086 INF: ===================Frame #1159=================== 15-12-21 21:01:39.656 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:01:39.665 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:39.691 -05 000000055 INF: ===================Frame #1165=================== 15-12-21 21:01:39.762 -05 000000086 INF: ===================Frame #1171=================== 15-12-21 21:01:39.773 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:0:1\r 15-12-21 21:01:39.862 -05 000000055 INF: ===================Frame #1178=================== 15-12-21 21:01:39.864 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:01:39.864 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:39.919 -05 000000086 INF: ===================Frame #1183=================== 15-12-21 21:01:40.049 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:40.050 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:40.051 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:40.052 -05 000000057 INF: WaitCommand(15000) start 15-12-21 21:01:40.052 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 15 of 15 seconds left=================== 15-12-21 21:01:40.077 -05 000000086 INF: ===================Frame #1195=================== 15-12-21 21:01:40.233 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:40.236 -05 000000086 INF: ===================Frame #1208=================== 15-12-21 21:01:40.296 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.427C:A1\r\n 15-12-21 21:01:40.296 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:40.323 -05 000000055 INF: ===================Frame #1215=================== 15-12-21 21:01:40.473 -05 000000055 INF: ===================Frame #1227=================== 15-12-21 21:01:40.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:40.545 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:40.545 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:40.624 -05 000000055 INF: ===================Frame #1239=================== 15-12-21 21:01:40.647 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:40.660 -05 000000086 INF: ===================Frame #1242=================== 15-12-21 21:01:40.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:40.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:40.772 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:40.774 -05 000000055 INF: ===================Frame #1250=================== 15-12-21 21:01:40.793 -05 000000061 INF: FPGA: Recv TDIYWAIT 15-12-21 21:01:40.794 -05 000000037 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:01:40.795 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:40.795 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:40.798 -05 000000037 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:01:40.803 -05 000000040 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:01:40.804 -05 000000040 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:01:40.804 -05 000000040 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:01:40.805 -05 000000040 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:01:40.805 -05 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:01:40.805 -05 000000040 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:01:40.805 -05 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:01:40.807 -05 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:01:40.807 -05 000000078 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:01:40.820 -05 000000078 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:01:40.864 -05 000000086 INF: ===================Frame #1250=================== 15-12-21 21:01:40.893 -05 000000086 INF: Camera complete - got 1250 frames. 15-12-21 21:01:40.896 -05 000000086 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:01:40.972 -05 000000023 INF: FPGA: Recv EX1MV 15-12-21 21:01:40.973 -05 000000040 INF: Excitation Filter 1: Moved 36 steps in 168.1165 ms 15-12-21 21:01:40.973 -05 000000040 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 168.2896 ms 15-12-21 21:01:40.973 -05 000000040 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 168.4073 ms 15-12-21 21:01:40.974 -05 000000040 INF: ====================================== 15-12-21 21:01:41.052 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:41.053 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 14 of 15 seconds left=================== 15-12-21 21:01:41.070 -05 000000055 INF: Camera complete - got 1250 frames. 15-12-21 21:01:41.072 -05 000000055 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:01:41.122 -05 000000086 INF: ===================Camera TDI=================== 15-12-21 21:01:41.146 -05 000000086 INF: ====================================== 15-12-21 21:01:41.212 -05 000000061 INF: FPGA: Recv EX2MV 15-12-21 21:01:41.212 -05 000000078 INF: Excitation Filter 2: Moved 107 steps in 404.9397 ms 15-12-21 21:01:41.212 -05 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 406.8937 ms 15-12-21 21:01:41.212 -05 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 406.9727 ms 15-12-21 21:01:41.213 -05 000000078 INF: ====================================== 15-12-21 21:01:41.215 -05 000000037 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:01:41.220 -05 000000037 INF: ====================================== 15-12-21 21:01:41.252 -05 000000055 INF: ===================Camera TDI=================== 15-12-21 21:01:41.279 -05 000000055 INF: ====================================== 15-12-21 21:01:41.284 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 21:01:41.290 -05 000000041 INF: ====================================== 15-12-21 21:01:41.421 -05 000000092 INF: Y Motor: Moved to 9.0764 after 16770 ms 15-12-21 21:01:41.422 -05 000000092 INF: ====================================== 15-12-21 21:01:41.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:41.425 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:41.431 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.432 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:01:41.464 -05 000000061 INF: FPGA: Recv TDICLINES 9772 15-12-21 21:01:41.464 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:01:41.526 -05 000000060 INF: FPGA: Recv TDIYERD 907643 15-12-21 21:01:41.526 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 21:01:41.590 -05 000000060 INF: FPGA: Recv ZADCR 25256 15-12-21 21:01:41.590 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.096. Y moved -60.304 mm 15-12-21 21:01:41.590 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:01:41.652 -05 000000084 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:01:41.652 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:01:41.652 -05 000000062 INF: TDIScan finished after 22246.3942 ms 15-12-21 21:01:41.652 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:01:41.652 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:01:41.654 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.683 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.043 um 15-12-21 21:01:41.684 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.693 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.696 -05 000000089 INF: ===================Dither Clean Up Command=================== 15-12-21 21:01:41.696 -05 000000090 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:01:41.696 -05 000000045 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:01:41.698 -05 000000055 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:01:41.698 -05 000000090 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:01:41.700 -05 000000045 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:01:41.700 -05 000000045 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:01:41.701 -05 000000060 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:01:41.709 -05 000000060 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:01:41.711 -05 000000040 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:01:41.711 -05 000000040 INF: ===================LFT:Extracting coords=================== 15-12-21 21:01:41.730 -05 000000090 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:01:41.731 -05 000000055 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:01:41.731 -05 000000090 INF: ====================================== 15-12-21 21:01:41.741 -05 000000040 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:01:41.743 -05 000000040 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:01:41.744 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:41.744 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:01:41.744 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:41.744 -05 000000061 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:41.744 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:41.745 -05 000000092 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:01:41.745 -05 000000041 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:01:41.745 -05 000000061 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:01:41.775 -05 000000084 INF: FPGA: Recv ZSTEP 15-12-21 21:01:41.775 -05 000000084 INF: FPGA: Recv ZSEL 15-12-21 21:01:41.775 -05 000000060 INF: FPGA: Xmit ZDACW 31134\n 15-12-21 21:01:41.775 -05 000000045 INF: ====================================== 15-12-21 21:01:41.794 -05 000000055 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:01:41.795 -05 000000055 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:01:41.796 -05 000000055 INF: ====================================== 15-12-21 21:01:41.837 -05 000000023 INF: FPGA: Recv ZDACW 15-12-21 21:01:41.838 -05 000000060 INF: ====================================== 15-12-21 21:01:41.929 -05 000000078 INF: LFT found best fwhm score 2.483767 in 134 ms 15-12-21 21:01:41.929 -05 000000078 INF: LFT found good score at index 1781 with fwhm value 2.483767. Next cycle, cycle 26 starting Z position for bottom surface is at -0.102 mm FC:B, C:25,L:2,B 15-12-21 21:01:41.929 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:41.930 -05 000000078 INF: ====================================== 15-12-21 21:01:41.955 -05 000000041 INF: LFT found best fwhm score 2.471435 in 158 ms 15-12-21 21:01:41.956 -05 000000041 INF: LFT found good score at index 6009 with fwhm value 2.471435. Next cycle, cycle 26 starting Z position for bottom surface is at -0.101 mm FC:B, C:25,L:2,B 15-12-21 21:01:41.956 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:41.957 -05 000000041 INF: ====================================== 15-12-21 21:01:41.968 -05 000000061 INF: LFT found best fwhm score 2.540548 in 172 ms 15-12-21 21:01:41.968 -05 000000061 INF: LFT found good score at index 7501 with fwhm value 2.540548. Next cycle, cycle 26 starting Z position for bottom surface is at -0.101 mm FC:B, C:25,L:2,B 15-12-21 21:01:41.969 -05 000000061 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:41.970 -05 000000061 INF: ====================================== 15-12-21 21:01:41.973 -05 000000092 INF: LFT found best fwhm score 2.31057 in 176 ms 15-12-21 21:01:41.973 -05 000000092 INF: LFT found good score at index 785 with fwhm value 2.31057. Next cycle, cycle 26 starting Z position for bottom surface is at -0.102 mm FC:B, C:25,L:2,B 15-12-21 21:01:41.973 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 21:01:41.973 -05 000000092 INF: ====================================== 15-12-21 21:01:41.975 -05 000000040 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:01:41.977 -05 000000040 INF: LFT weighted average best Z for bottom surface is at -0.101mm FC:B, C:25,L:2,B 15-12-21 21:01:41.977 -05 000000040 INF: ====================================== 15-12-21 21:01:41.985 -05 000000089 INF: ====================================== 15-12-21 21:01:41.987 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.994 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:01:41.995 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.995 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:01:41.995 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.996 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:01:41.996 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.996 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:01:41.997 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:41.997 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 21:01:41.997 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 21:01:41.999 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 14 of 15 seconds left, Waiting for image analysis=================== 15-12-21 21:01:41.999 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 14 of 15 seconds left=================== 15-12-21 21:01:41.999 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:01:42.000 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 21:01:42.000 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:01:42.000 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:01:42.000 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:01:42.001 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:42.003 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:01:42.003 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:01:42.015 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:42.015 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:01:42.015 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:42.015 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -118.8 um, section = B_1 15-12-21 21:01:42.018 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:01:42.019 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:01:42.025 -05 000000090 INF: ===================Move X,Y=================== 15-12-21 21:01:42.025 -05 000000041 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:01:42.025 -05 000000055 INF: ===================MoveEmissionFilters=================== 15-12-21 21:01:42.032 -05 000000090 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:01:42.032 -05 000000045 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:01:42.032 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:01:42.033 -05 000000041 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:01:42.036 -05 000000041 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:01:42.036 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:01:42.036 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:01:42.036 -05 000000041 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:01:42.040 -05 000000045 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:01:42.040 -05 000000089 INF: ===================Move X Motor without settling=================== 15-12-21 21:01:42.040 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:01:42.040 -05 000000056 INF: ===================Move Y Motor without settling=================== 15-12-21 21:01:42.045 -05 000000089 INF: X Motor: Xmit PR VM\n 15-12-21 21:01:42.045 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:01:42.048 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:01:42.049 -05 000000056 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 21:01:42.049 -05 000000056 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:01:42.049 -05 000000092 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:01:42.049 -05 000000056 INF: Y Motor: Xmit 1G\n 15-12-21 21:01:42.050 -05 000000061 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:01:42.050 -05 000000060 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:01:42.050 -05 000000040 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:01:42.050 -05 000000086 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:01:42.050 -05 000000084 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:01:42.050 -05 000000041 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:01:42.050 -05 000000040 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:01:42.050 -05 000000061 INF: ====================================== 15-12-21 21:01:42.055 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:42.055 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 13 of 15 seconds left=================== 15-12-21 21:01:42.055 -05 000000086 INF: ====================================== 15-12-21 21:01:42.059 -05 000000084 INF: ====================================== 15-12-21 21:01:42.059 -05 000000092 INF: ====================================== 15-12-21 21:01:42.063 -05 000000040 INF: ====================================== 15-12-21 21:01:42.066 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:01:42.066 -05 000000061 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:01:42.069 -05 000000060 INF: ====================================== 15-12-21 21:01:42.073 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:01:42.076 -05 000000086 INF: ===================TDI Scan Setup=================== 15-12-21 21:01:42.076 -05 000000084 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:01:42.076 -05 000000061 INF: ====================================== 15-12-21 21:01:42.081 -05 000000092 INF: ===================Camera Arm TDI=================== 15-12-21 21:01:42.081 -05 000000084 INF: ====================================== 15-12-21 21:01:42.082 -05 000000023 INF: ====================================== 15-12-21 21:01:42.082 -05 000000045 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:01:42.082 -05 000000037 INF: ====================================== 15-12-21 21:01:42.082 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:42.085 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:01:42.088 -05 000000045 INF: ====================================== 15-12-21 21:01:42.088 -05 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:01:42.092 -05 000000086 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:01:42.092 -05 000000078 INF: ====================================== 15-12-21 21:01:42.095 -05 000000086 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:01:42.097 -05 000000055 INF: ====================================== 15-12-21 21:01:42.108 -05 000000056 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:01:42.110 -05 000000089 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:01:42.111 -05 000000056 INF: Y Motor: Recv 1G\r\n 15-12-21 21:01:42.111 -05 000000089 INF: X Motor: Xmit PR VI\n 15-12-21 21:01:42.112 -05 000000056 INF: Y Motor: Xmit 1D\n 15-12-21 21:01:42.150 -05 000000040 INF: FPGA: Recv ZSEL 15-12-21 21:01:42.153 -05 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:01:42.153 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:42.161 -05 000000086 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:01:42.161 -05 000000086 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:01:42.161 -05 000000086 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:01:42.182 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:42.184 -05 000000056 INF: Y Motor: Recv 1D\r\n 15-12-21 21:01:42.185 -05 000000089 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:01:42.185 -05 000000056 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:01:42.185 -05 000000089 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:01:42.185 -05 000000089 INF: X Motor: Moving to 81.0290 mm @15.000 mm/sec, started at 80.2573 mm 15-12-21 21:01:42.185 -05 000000089 INF: X Motor: Xmit MA 9023\n 15-12-21 21:01:42.186 -05 000000056 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:01:42.193 -05 000000034 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104=================== 15-12-21 21:01:42.193 -05 000000082 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104=================== 15-12-21 21:01:42.194 -05 000000072 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105=================== 15-12-21 21:01:42.194 -05 000000020 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104=================== 15-12-21 21:01:42.194 -05 000000031 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2106=================== 15-12-21 21:01:42.194 -05 000000088 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2106, Registering and Extracting C025 L002 T2107=================== 15-12-21 21:01:42.194 -05 000000027 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2106, Registering and Extracting C025 L002 T2107, Registering and Extracting C025 L002 T2108=================== 15-12-21 21:01:42.194 -05 000000044 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104=================== 15-12-21 21:01:42.213 -05 000000037 INF: FPGA: Recv ZSTEP 15-12-21 21:01:42.214 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:42.219 -05 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:01:42.220 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:42.223 -05 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:01:42.224 -05 000000086 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:01:42.224 -05 000000086 INF: Z Motor: Arming to move to -0.0788 mm 15-12-21 21:01:42.224 -05 000000086 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:01:42.297 -05 000000037 INF: FPGA: Recv ZYT 15-12-21 21:01:42.297 -05 000000089 INF: X Motor: Recv MA 9023\r\n> 15-12-21 21:01:42.297 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:42.297 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:42.297 -05 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907641 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:01:42.297 -05 000000086 INF: FPGA: Xmit ZARM 20648\n 15-12-21 21:01:42.299 -05 000000089 INF: X Motor: WaitUntilStopped 60051 15-12-21 21:01:42.354 -05 000000061 INF: FPGA: Recv ZARM 15-12-21 21:01:42.354 -05 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 56.7228 ms 15-12-21 21:01:42.354 -05 000000086 INF: Z Motor: ArmAbsStepped took 130.3679 ms 15-12-21 21:01:42.355 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:01:42.358 -05 000000086 INF: ===================TDI Scan Setup=================== 15-12-21 21:01:42.375 -05 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:01:42.376 -05 000000086 INF: ===================TDI Scan Setup=================== 15-12-21 21:01:42.379 -05 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:01:42.380 -05 000000086 INF: ===================TDI Scan Setup=================== 15-12-21 21:01:42.455 -05 000000086 INF: ====================================== 15-12-21 21:01:42.536 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:42.635 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:42.635 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:42.635 -05 000000089 INF: X Motor: Xmit PR ER\n 15-12-21 21:01:42.697 -05 000000089 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:01:42.697 -05 000000089 INF: X Motor: Moved to 81.0288 after 398 ms 15-12-21 21:01:42.731 -05 000000089 INF: ====================================== 15-12-21 21:01:42.781 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:42.832 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 21:01:42.832 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:42.966 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:43.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:43.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:43.057 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:43.058 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 12 of 15 seconds left=================== 15-12-21 21:01:43.175 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:43.200 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.989C:A1\r\n 15-12-21 21:01:43.200 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:43.627 -05 000000092 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:01:43.627 -05 000000092 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:01:43.627 -05 000000092 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:01:44.059 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:44.059 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 11 of 15 seconds left=================== 15-12-21 21:01:44.348 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:44.368 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:44.368 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:44.472 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:44.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:44.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:44.608 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:44.667 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:44.667 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:45.060 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:45.060 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 10 of 15 seconds left=================== 15-12-21 21:01:45.331 -05 000000092 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:01:45.331 -05 000000092 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:01:45.331 -05 000000092 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:01:45.333 -05 000000092 INF: ====================================== 15-12-21 21:01:45.335 -05 000000041 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:01:45.350 -05 000000041 INF: ====================================== 15-12-21 21:01:45.407 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:45.458 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 58.674C:A1\r\n 15-12-21 21:01:45.458 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:45.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:45.960 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:45.960 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:46.023 -05 000000056 INF: Y Motor: Moved to 70.6885 after 3838 ms 15-12-21 21:01:46.024 -05 000000056 INF: ====================================== 15-12-21 21:01:46.026 -05 000000090 INF: ===================Move X,Y=================== 15-12-21 21:01:46.035 -05 000000090 INF: ====================================== 15-12-21 21:01:46.038 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:01:46.042 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:46.045 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:01:46.060 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:46.060 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 9 of 15 seconds left=================== 15-12-21 21:01:46.069 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:46.083 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:01:46.084 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:46.084 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:46.084 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:01:46.144 -05 000000037 INF: FPGA: Recv ZFREQCL 15-12-21 21:01:46.145 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:01:46.145 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:46.145 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:01:46.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:46.206 -05 000000023 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:01:46.206 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:01:46.207 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:46.208 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:46.208 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:46.208 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:46.209 -05 000000090 INF: ===================TDI FPGA Arm=================== 15-12-21 21:01:46.209 -05 000000056 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:01:46.210 -05 000000056 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:01:46.219 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:46.224 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:01:46.227 -05 000000090 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:01:46.268 -05 000000089 INF: FPGA: Recv TDIYPOS 15-12-21 21:01:46.269 -05 000000056 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:01:46.269 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:46.270 -05 000000056 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:01:46.270 -05 000000056 INF: ====================================== 15-12-21 21:01:46.275 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:01:46.278 -05 000000090 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:01:46.330 -05 000000055 INF: FPGA: Recv TDIYARM3 15-12-21 21:01:46.331 -05 000000090 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:01:46.334 -05 000000090 INF: ===================TDI FPGA Arm=================== 15-12-21 21:01:46.343 -05 000000090 INF: ====================================== 15-12-21 21:01:46.345 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:01:46.346 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:01:46.346 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:46.350 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:46.351 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:46.366 -05 000000045 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:01:46.368 -05 000000089 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:01:46.368 -05 000000045 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:01:46.369 -05 000000045 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:01:46.370 -05 000000045 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:01:46.385 -05 000000089 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:01:46.385 -05 000000089 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:01:46.385 -05 000000089 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:01:46.385 -05 000000045 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:01:46.404 -05 000000089 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:01:46.534 -05 000000037 INF: FPGA: Recv EX1MV 15-12-21 21:01:46.535 -05 000000089 INF: Excitation Filter 1: Moved -36 steps in 149.3658 ms 15-12-21 21:01:46.535 -05 000000089 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 149.5313 ms 15-12-21 21:01:46.535 -05 000000089 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 165.2563 ms 15-12-21 21:01:46.536 -05 000000089 INF: ====================================== 15-12-21 21:01:46.798 -05 000000084 INF: FPGA: Recv EX2MV 15-12-21 21:01:46.798 -05 000000045 INF: Excitation Filter 2: Moved -107 steps in 428.4008 ms 15-12-21 21:01:46.798 -05 000000045 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 429.5595 ms 15-12-21 21:01:46.798 -05 000000045 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 429.6699 ms 15-12-21 21:01:46.799 -05 000000045 INF: ====================================== 15-12-21 21:01:46.802 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:46.808 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:01:46.823 -05 000000040 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:01:46.823 -05 000000055 INF: ===================FPGA Z Wait=================== 15-12-21 21:01:46.824 -05 000000061 INF: ===================Camera TDI=================== 15-12-21 21:01:46.824 -05 000000090 INF: ===================Move Y Motor without settling=================== 15-12-21 21:01:46.829 -05 000000090 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:01:46.829 -05 000000090 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:01:46.830 -05 000000055 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:01:46.836 -05 000000090 INF: Y Motor: Xmit 1G\n 15-12-21 21:01:46.837 -05 000000040 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:01:46.842 -05 000000040 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:01:46.842 -05 000000061 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:01:46.848 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 21:01:46.851 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 21:01:46.914 -05 000000090 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:01:46.915 -05 000000090 INF: Y Motor: Recv 1G\r\n 15-12-21 21:01:46.916 -05 000000090 INF: Y Motor: Xmit 1D\n 15-12-21 21:01:46.973 -05 000000090 INF: Y Motor: Recv 1D\r\n 15-12-21 21:01:46.974 -05 000000090 INF: Y Motor: Recv *407662\r\n 15-12-21 21:01:46.988 -05 000000090 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:01:47.062 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:47.063 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 8 of 15 seconds left=================== 15-12-21 21:01:47.126 -05 000000038 INF: FPGA: Recv ZWAIT 15-12-21 21:01:47.128 -05 000000055 INF: ====================================== 15-12-21 21:01:47.316 -05 000000037 INF: ===================Frame #3=================== 15-12-21 21:01:47.329 -05 000000089 INF: ===================Frame #4=================== 15-12-21 21:01:47.472 -05 000000037 INF: ===================Frame #15=================== 15-12-21 21:01:47.595 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:47.623 -05 000000037 INF: ===================Frame #27=================== 15-12-21 21:01:47.626 -05 000000089 INF: ===================Frame #27=================== 15-12-21 21:01:47.659 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:47.659 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:47.771 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:47.773 -05 000000037 INF: ===================Frame #39=================== 15-12-21 21:01:47.776 -05 000000089 INF: ===================Frame #39=================== 15-12-21 21:01:47.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:47.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:47.887 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:47.910 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:47.910 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:47.924 -05 000000037 INF: ===================Frame #51=================== 15-12-21 21:01:47.926 -05 000000089 INF: ===================Frame #51=================== 15-12-21 21:01:47.958 -05 000000082 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2106, Registering and Extracting C025 L002 T2107=================== 15-12-21 21:01:47.993 -05 000000051 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2106, Registering and Extracting C025 L002 T2107, Registering and Extracting C025 L002 T2109=================== 15-12-21 21:01:48.012 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:48.063 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:48.064 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 7 of 15 seconds left=================== 15-12-21 21:01:48.074 -05 000000037 INF: ===================Frame #63=================== 15-12-21 21:01:48.076 -05 000000089 INF: ===================Frame #63=================== 15-12-21 21:01:48.094 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 21:01:48.094 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:48.224 -05 000000037 INF: ===================Frame #75=================== 15-12-21 21:01:48.226 -05 000000089 INF: ===================Frame #75=================== 15-12-21 21:01:48.338 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:48.375 -05 000000037 INF: ===================Frame #86=================== 15-12-21 21:01:48.376 -05 000000089 INF: ===================Frame #87=================== 15-12-21 21:01:48.410 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.982C:A1\r\n 15-12-21 21:01:48.410 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:48.526 -05 000000089 INF: ===================Frame #98=================== 15-12-21 21:01:48.607 -05 000000034 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2106, Registering and Extracting C025 L002 T2107=================== 15-12-21 21:01:48.675 -05 000000031 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2106=================== 15-12-21 21:01:48.682 -05 000000044 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105=================== 15-12-21 21:01:48.694 -05 000000009 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2111=================== 15-12-21 21:01:48.694 -05 000000048 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2111=================== 15-12-21 21:01:48.694 -05 000000028 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2111, Registering and Extracting C025 L002 T2112=================== 15-12-21 21:01:48.755 -05 000000037 INF: ===================Frame #116=================== 15-12-21 21:01:48.764 -05 000000072 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2111=================== 15-12-21 21:01:48.770 -05 000000020 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110=================== 15-12-21 21:01:48.795 -05 000000063 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2113=================== 15-12-21 21:01:48.795 -05 000000068 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2113, Registering and Extracting C025 L002 T2114=================== 15-12-21 21:01:48.881 -05 000000027 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2113=================== 15-12-21 21:01:48.895 -05 000000079 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2113, Registering and Extracting C025 L002 T2115=================== 15-12-21 21:01:48.967 -05 000000088 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2113=================== 15-12-21 21:01:48.995 -05 000000054 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2113, Registering and Extracting C025 L002 T2116=================== 15-12-21 21:01:49.065 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:49.065 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 6 of 15 seconds left=================== 15-12-21 21:01:49.116 -05 000000037 INF: ===================Frame #145=================== 15-12-21 21:01:49.135 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:49.157 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:49.157 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:49.157 -05 000000089 INF: ===================Frame #148=================== 15-12-21 21:01:49.271 -05 000000037 INF: ===================Frame #157=================== 15-12-21 21:01:49.281 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:49.358 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:49.358 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:49.422 -05 000000037 INF: ===================Frame #169=================== 15-12-21 21:01:49.473 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:49.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:49.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:49.573 -05 000000037 INF: ===================Frame #181=================== 15-12-21 21:01:49.667 -05 000000089 INF: ===================Frame #189=================== 15-12-21 21:01:49.723 -05 000000037 INF: ===================Frame #193=================== 15-12-21 21:01:49.819 -05 000000089 INF: ===================Frame #201=================== 15-12-21 21:01:49.873 -05 000000037 INF: ===================Frame #205=================== 15-12-21 21:01:49.969 -05 000000089 INF: ===================Frame #213=================== 15-12-21 21:01:50.023 -05 000000037 INF: ===================Frame #217=================== 15-12-21 21:01:50.075 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:50.075 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 5 of 15 seconds left=================== 15-12-21 21:01:50.120 -05 000000089 INF: ===================Frame #224=================== 15-12-21 21:01:50.173 -05 000000037 INF: ===================Frame #229=================== 15-12-21 21:01:50.389 -05 000000037 INF: ===================Frame #246=================== 15-12-21 21:01:50.617 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:51.022 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:51.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:51.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:51.076 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:51.076 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 4 of 15 seconds left=================== 15-12-21 21:01:51.229 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:51.339 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:51.339 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:51.609 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:51.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:51.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:51.746 -05 000000089 INF: ===================Frame #353=================== 15-12-21 21:01:51.896 -05 000000089 INF: ===================Frame #365=================== 15-12-21 21:01:52.047 -05 000000089 INF: ===================Frame #377=================== 15-12-21 21:01:52.077 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:52.077 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 3 of 15 seconds left=================== 15-12-21 21:01:52.199 -05 000000089 INF: ===================Frame #389=================== 15-12-21 21:01:52.349 -05 000000089 INF: ===================Frame #401=================== 15-12-21 21:01:52.439 -05 000000037 INF: ===================Frame #408=================== 15-12-21 21:01:52.501 -05 000000089 INF: ===================Frame #413=================== 15-12-21 21:01:52.517 -05 000000051 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110, Registering and Extracting C025 L002 T2113=================== 15-12-21 21:01:52.652 -05 000000089 INF: ===================Frame #425=================== 15-12-21 21:01:52.802 -05 000000089 INF: ===================Frame #436=================== 15-12-21 21:01:52.892 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:52.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:52.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:52.963 -05 000000037 INF: ===================Frame #449=================== 15-12-21 21:01:53.022 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:53.046 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:53.046 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:53.078 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:53.078 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 2 of 15 seconds left=================== 15-12-21 21:01:53.113 -05 000000037 INF: ===================Frame #461=================== 15-12-21 21:01:53.153 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:53.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:53.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:53.264 -05 000000037 INF: ===================Frame #473=================== 15-12-21 21:01:53.336 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:53.354 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 21:01:53.354 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:53.415 -05 000000037 INF: ===================Frame #485=================== 15-12-21 21:01:53.517 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:53.517 -05 000000089 INF: ===================Frame #493=================== 15-12-21 21:01:53.540 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.038C:A1\r\n 15-12-21 21:01:53.540 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:53.565 -05 000000037 INF: ===================Frame #497=================== 15-12-21 21:01:53.671 -05 000000089 INF: ===================Frame #505=================== 15-12-21 21:01:53.715 -05 000000037 INF: ===================Frame #509=================== 15-12-21 21:01:53.822 -05 000000089 INF: ===================Frame #517=================== 15-12-21 21:01:53.867 -05 000000037 INF: ===================Frame #521=================== 15-12-21 21:01:53.975 -05 000000089 INF: ===================Frame #529=================== 15-12-21 21:01:54.021 -05 000000037 INF: ===================Frame #532=================== 15-12-21 21:01:54.079 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:54.079 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 1 of 15 seconds left=================== 15-12-21 21:01:54.125 -05 000000089 INF: ===================Frame #541=================== 15-12-21 21:01:54.276 -05 000000089 INF: ===================Frame #553=================== 15-12-21 21:01:54.430 -05 000000089 INF: ===================Frame #565=================== 15-12-21 21:01:54.466 -05 000000037 INF: ===================Frame #568=================== 15-12-21 21:01:54.521 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:54.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:54.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:54.580 -05 000000089 INF: ===================Frame #577=================== 15-12-21 21:01:54.647 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:54.664 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:54.664 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:54.681 -05 000000009 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105, Registering and Extracting C025 L002 T2110=================== 15-12-21 21:01:54.683 -05 000000037 INF: ===================Frame #585=================== 15-12-21 21:01:54.731 -05 000000089 INF: ===================Frame #589=================== 15-12-21 21:01:54.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:54.788 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:54.788 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:54.833 -05 000000037 INF: ===================Frame #597=================== 15-12-21 21:01:54.882 -05 000000089 INF: ===================Frame #601=================== 15-12-21 21:01:54.985 -05 000000037 INF: ===================Frame #609=================== 15-12-21 21:01:55.032 -05 000000089 INF: ===================Frame #613=================== 15-12-21 21:01:55.059 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:55.059 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:55.059 -05 000000057 INF: WaitCommand(15000) end 15-12-21 21:01:55.060 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:01:55.060 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:55.061 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:55.063 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:01:55.084 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:55.140 -05 000000037 INF: ===================Frame #621=================== 15-12-21 21:01:55.144 -05 000000028 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104, Registering and Extracting C025 L002 T2105=================== 15-12-21 21:01:55.164 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:55.164 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Selecting Reagent USM (3)=================== 15-12-21 21:01:55.164 -05 000000057 INF: Valve A2: Go to position 3 15-12-21 21:01:55.164 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 21:01:55.182 -05 000000089 INF: ===================Frame #625=================== 15-12-21 21:01:55.225 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 21:01:55.225 -05 000000057 INF: Valve A2: 49.248 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:01:55.225 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 5 to 3 15-12-21 21:01:55.225 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC3\r 15-12-21 21:01:55.226 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 21:01:55.226 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 21:01:55.307 -05 000000037 INF: ===================Frame #634=================== 15-12-21 21:01:55.308 -05 000000063 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103, Registering and Extracting C025 L002 T2104=================== 15-12-21 21:01:55.347 -05 000000089 INF: ===================Frame #637=================== 15-12-21 21:01:55.512 -05 000000089 INF: ===================Frame #650=================== 15-12-21 21:01:55.715 -05 000000068 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102, Registering and Extracting C025 L002 T2103=================== 15-12-21 21:01:55.775 -05 000000048 INF: ===================Registering and Extracting C025 L002 T2101, Registering and Extracting C025 L002 T2102=================== 15-12-21 21:01:55.786 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:01:55.803 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 3\r 15-12-21 21:01:55.804 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 49.292C:A1\r\n 15-12-21 21:01:55.804 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:55.804 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:55.804 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 21:01:55.807 -05 000000079 INF: ===================Registering and Extracting C025 L002 T2101=================== 15-12-21 21:01:55.890 -05 000000054 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:01:55.959 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:55.966 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:01:56.021 -05 000000037 INF: ===================Frame #691=================== 15-12-21 21:01:56.097 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:56.104 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:01:56.161 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 21:01:56.172 -05 000000037 INF: ===================Frame #703=================== 15-12-21 21:01:56.177 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:01:56.177 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:56.236 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:56.249 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:01:56.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:56.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:56.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:56.323 -05 000000037 INF: ===================Frame #715=================== 15-12-21 21:01:56.359 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:56.367 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:01:56.403 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:01:56.426 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:01:56.426 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:56.453 -05 000000089 INF: ===================Frame #725=================== 15-12-21 21:01:56.474 -05 000000037 INF: ===================Frame #727=================== 15-12-21 21:01:56.501 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:01:56.529 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:56.530 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:01:56.530 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 21:01:56.530 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:56.552 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:56.552 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:56.607 -05 000000089 INF: ===================Frame #737=================== 15-12-21 21:01:56.613 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:01:56.624 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 3, aspirate port PortB, aspiration rate 750, dispense rate 2500, volume 75, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:01:56.624 -05 000000037 INF: ===================Frame #739=================== 15-12-21 21:01:56.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:56.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:56.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:56.713 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:01:56.757 -05 000000089 INF: ===================Frame #749=================== 15-12-21 21:01:56.774 -05 000000037 INF: ===================Frame #750=================== 15-12-21 21:01:56.801 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 21:01:56.801 -05 000000057 INF: Current Position of Pump is: 23040 15-12-21 21:01:56.802 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB=================== 15-12-21 21:01:56.902 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V2400s231P14400R\r 15-12-21 21:01:56.910 -05 000000089 INF: ===================Frame #761=================== 15-12-21 21:01:56.988 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:57.061 -05 000000089 INF: ===================Frame #773=================== 15-12-21 21:01:57.088 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:57.175 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:57.213 -05 000000089 INF: ===================Frame #785=================== 15-12-21 21:01:57.254 -05 000000037 INF: ===================Frame #788=================== 15-12-21 21:01:57.363 -05 000000089 INF: ===================Frame #797=================== 15-12-21 21:01:57.425 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:57.488 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:57.514 -05 000000089 INF: ===================Frame #809=================== 15-12-21 21:01:57.545 -05 000000037 INF: ===================Frame #811=================== 15-12-21 21:01:57.666 -05 000000089 INF: ===================Frame #821=================== 15-12-21 21:01:57.695 -05 000000037 INF: ===================Frame #823=================== 15-12-21 21:01:57.738 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:57.799 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:57.816 -05 000000089 INF: ===================Frame #833=================== 15-12-21 21:01:57.845 -05 000000037 INF: ===================Frame #835=================== 15-12-21 21:01:57.901 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 21:01:57.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:57.923 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:57.923 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:57.966 -05 000000089 INF: ===================Frame #845=================== 15-12-21 21:01:57.995 -05 000000037 INF: ===================Frame #847=================== 15-12-21 21:01:58.029 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:58.049 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:58.050 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:58.050 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:58.110 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:58.116 -05 000000089 INF: ===================Frame #857=================== 15-12-21 21:01:58.145 -05 000000037 INF: ===================Frame #859=================== 15-12-21 21:01:58.153 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:58.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:58.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:58.268 -05 000000089 INF: ===================Frame #869=================== 15-12-21 21:01:58.295 -05 000000037 INF: ===================Frame #871=================== 15-12-21 21:01:58.360 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:58.418 -05 000000089 INF: ===================Frame #880=================== 15-12-21 21:01:58.423 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:58.446 -05 000000037 INF: ===================Frame #883=================== 15-12-21 21:01:58.454 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:01:58.489 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 21:01:58.489 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:58.596 -05 000000037 INF: ===================Frame #895=================== 15-12-21 21:01:58.650 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:01:58.672 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.991C:A1\r\n 15-12-21 21:01:58.672 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:58.674 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:58.734 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:58.747 -05 000000037 INF: ===================Frame #906=================== 15-12-21 21:01:58.984 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:59.046 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:59.100 -05 000000089 INF: ===================Frame #934=================== 15-12-21 21:01:59.238 -05 000000037 INF: ===================Frame #945=================== 15-12-21 21:01:59.296 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:59.343 -05 000000089 INF: ===================Frame #954=================== 15-12-21 21:01:59.357 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:59.390 -05 000000037 INF: ===================Frame #957=================== 15-12-21 21:01:59.402 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:01:59.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:01:59.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:59.520 -05 000000089 INF: ===================Frame #968=================== 15-12-21 21:01:59.528 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:01:59.541 -05 000000037 INF: ===================Frame #969=================== 15-12-21 21:01:59.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:59.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:59.607 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:59.652 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:01:59.674 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:59.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:01:59.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:01:59.690 -05 000000089 INF: ===================Frame #981=================== 15-12-21 21:01:59.691 -05 000000037 INF: ===================Frame #981=================== 15-12-21 21:01:59.841 -05 000000037 INF: ===================Frame #993=================== 15-12-21 21:01:59.841 -05 000000089 INF: ===================Frame #993=================== 15-12-21 21:01:59.924 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:01:59.983 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:01:59.991 -05 000000089 INF: ===================Frame #1005=================== 15-12-21 21:01:59.991 -05 000000037 INF: ===================Frame #1005=================== 15-12-21 21:02:00.141 -05 000000089 INF: ===================Frame #1017=================== 15-12-21 21:02:00.141 -05 000000037 INF: ===================Frame #1017=================== 15-12-21 21:02:00.233 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:00.291 -05 000000037 INF: ===================Frame #1029=================== 15-12-21 21:02:00.291 -05 000000089 INF: ===================Frame #1029=================== 15-12-21 21:02:00.294 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:00.441 -05 000000037 INF: ===================Frame #1040=================== 15-12-21 21:02:00.441 -05 000000089 INF: ===================Frame #1040=================== 15-12-21 21:02:00.544 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:00.607 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:00.731 -05 000000089 INF: ===================Frame #1063=================== 15-12-21 21:02:00.801 -05 000000037 INF: ===================Frame #1069=================== 15-12-21 21:02:00.857 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:00.881 -05 000000089 INF: ===================Frame #1075=================== 15-12-21 21:02:00.918 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:00.951 -05 000000037 INF: ===================Frame #1081=================== 15-12-21 21:02:00.957 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:00.983 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 45.195C:A1\r\n 15-12-21 21:02:00.983 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:01.031 -05 000000089 INF: ===================Frame #1087=================== 15-12-21 21:02:01.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:01.101 -05 000000037 INF: ===================Frame #1093=================== 15-12-21 21:02:01.105 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:01.105 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:01.168 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:01.181 -05 000000089 INF: ===================Frame #1099=================== 15-12-21 21:02:01.213 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:01.230 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:01.231 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:01.231 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:01.251 -05 000000037 INF: ===================Frame #1104=================== 15-12-21 21:02:01.331 -05 000000089 INF: ===================Frame #1111=================== 15-12-21 21:02:01.332 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:01.355 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:01.355 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:01.477 -05 000000037 INF: ===================Frame #1122=================== 15-12-21 21:02:01.481 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:01.482 -05 000000089 INF: ===================Frame #1123=================== 15-12-21 21:02:01.542 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:01.632 -05 000000089 INF: ===================Frame #1134=================== 15-12-21 21:02:01.648 -05 000000037 INF: ===================Frame #1136=================== 15-12-21 21:02:01.792 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:01.826 -05 000000037 INF: ===================Frame #1150=================== 15-12-21 21:02:01.855 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:01.902 -05 000000089 INF: ===================Frame #1156=================== 15-12-21 21:02:01.993 -05 000000037 INF: ===================Frame #1163=================== 15-12-21 21:02:02.077 -05 000000089 INF: ===================Frame #1170=================== 15-12-21 21:02:02.105 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:02.144 -05 000000037 INF: ===================Frame #1175=================== 15-12-21 21:02:02.166 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:02.247 -05 000000089 INF: ===================Frame #1183=================== 15-12-21 21:02:02.294 -05 000000037 INF: ===================Frame #1187=================== 15-12-21 21:02:02.397 -05 000000089 INF: ===================Frame #1195=================== 15-12-21 21:02:02.416 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:02.444 -05 000000037 INF: ===================Frame #1199=================== 15-12-21 21:02:02.479 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:02.547 -05 000000089 INF: ===================Frame #1207=================== 15-12-21 21:02:02.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:02.594 -05 000000037 INF: ===================Frame #1211=================== 15-12-21 21:02:02.604 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:02.604 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:02.697 -05 000000089 INF: ===================Frame #1219=================== 15-12-21 21:02:02.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:02.729 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:02.729 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:02.729 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:02.744 -05 000000037 INF: ===================Frame #1222=================== 15-12-21 21:02:02.790 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:02.833 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:02.848 -05 000000089 INF: ===================Frame #1231=================== 15-12-21 21:02:02.854 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:02.854 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:02.983 -05 000000037 INF: ===================Frame #1241=================== 15-12-21 21:02:02.998 -05 000000089 INF: ===================Frame #1242=================== 15-12-21 21:02:03.040 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:03.101 -05 000000041 INF: FPGA: Recv TDIYWAIT 15-12-21 21:02:03.102 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:03.102 -05 000000040 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:02:03.105 -05 000000040 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:02:03.111 -05 000000025 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:02:03.111 -05 000000023 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:02:03.111 -05 000000025 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:02:03.111 -05 000000025 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:02:03.111 -05 000000025 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:02:03.111 -05 000000025 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:02:03.111 -05 000000023 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:02:03.111 -05 000000023 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:02:03.112 -05 000000023 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:02:03.117 -05 000000023 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:02:03.155 -05 000000037 INF: ===================Frame #1250=================== 15-12-21 21:02:03.222 -05 000000037 INF: Camera complete - got 1250 frames. 15-12-21 21:02:03.223 -05 000000037 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:02:03.320 -05 000000060 INF: FPGA: Recv EX1MV 15-12-21 21:02:03.320 -05 000000025 INF: Excitation Filter 1: Moved 36 steps in 208.5691 ms 15-12-21 21:02:03.320 -05 000000025 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 208.667 ms 15-12-21 21:02:03.320 -05 000000025 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 208.9126 ms 15-12-21 21:02:03.322 -05 000000025 INF: ====================================== 15-12-21 21:02:03.355 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:03.429 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:03.511 -05 000000025 INF: FPGA: Recv EX2MV 15-12-21 21:02:03.511 -05 000000023 INF: Excitation Filter 2: Moved 107 steps in 399.6518 ms 15-12-21 21:02:03.511 -05 000000023 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 399.834 ms 15-12-21 21:02:03.511 -05 000000023 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 399.9126 ms 15-12-21 21:02:03.512 -05 000000023 INF: ====================================== 15-12-21 21:02:03.515 -05 000000040 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:02:03.523 -05 000000040 INF: ====================================== 15-12-21 21:02:03.590 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:03.634 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 21:02:03.634 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:03.737 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:03.804 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:03.807 -05 000000090 INF: Y Motor: Moved to 9.0765 after 16819 ms 15-12-21 21:02:03.808 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:03.808 -05 000000090 INF: ====================================== 15-12-21 21:02:03.808 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 21:02:03.852 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.976C:A1\r\n 15-12-21 21:02:03.852 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:03.872 -05 000000089 INF: ===================Frame #1250=================== 15-12-21 21:02:03.872 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 21:02:03.894 -05 000000089 INF: Camera complete - got 1250 frames. 15-12-21 21:02:03.895 -05 000000089 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:02:03.896 -05 000000037 INF: ====================================== 15-12-21 21:02:03.908 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:02:03.957 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 21:02:03.957 -05 000000057 INF: Current Position of Pump is: 37440 15-12-21 21:02:03.957 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:02:04.016 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 21:02:04.040 -05 000000089 INF: ====================================== 15-12-21 21:02:04.044 -05 000000061 INF: ===================Camera TDI=================== 15-12-21 21:02:04.046 -05 000000061 INF: ====================================== 15-12-21 21:02:04.051 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:04.054 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:04.056 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.058 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 21:02:04.059 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:02:04.080 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:04.102 -05 000000038 INF: FPGA: Recv TDICLINES 9902 15-12-21 21:02:04.102 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:02:04.104 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:04.104 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:04.139 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:04.163 -05 000000055 INF: FPGA: Recv TDIYERD 907651 15-12-21 21:02:04.163 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 21:02:04.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:04.225 -05 000000041 INF: FPGA: Recv ZADCR 24014 15-12-21 21:02:04.225 -05 000000062 INF: At scan end Y pos = 9.077 and Z pos = -0.092. Y moved -60.303 mm 15-12-21 21:02:04.225 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:02:04.229 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:04.229 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:04.239 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:04.289 -05 000000092 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:02:04.289 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:02:04.289 -05 000000062 INF: TDIScan finished after 22285.187 ms 15-12-21 21:02:04.289 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:02:04.289 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:02:04.292 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.324 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:04.326 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:04.330 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.989 um 15-12-21 21:02:04.331 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.341 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.344 -05 000000056 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:02:04.344 -05 000000084 INF: ===================Dither Clean Up Command=================== 15-12-21 21:02:04.345 -05 000000089 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:02:04.345 -05 000000056 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:02:04.345 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:02:04.345 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:02:04.345 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:02:04.356 -05 000000092 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:02:04.356 -05 000000060 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:02:04.356 -05 000000092 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:02:04.359 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:04.359 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:04.361 -05 000000060 INF: ===================LFT:Extracting coords=================== 15-12-21 21:02:04.389 -05 000000060 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:02:04.390 -05 000000060 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:02:04.391 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:04.392 -05 000000056 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:02:04.392 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:04.392 -05 000000041 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:02:04.392 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:04.396 -05 000000056 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:02:04.397 -05 000000089 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:02:04.397 -05 000000023 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:02:04.397 -05 000000056 INF: ====================================== 15-12-21 21:02:04.397 -05 000000086 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:02:04.398 -05 000000040 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:04.399 -05 000000040 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:02:04.413 -05 000000056 INF: FPGA: Recv ZSTEP 15-12-21 21:02:04.413 -05 000000056 INF: FPGA: Recv ZSEL 15-12-21 21:02:04.413 -05 000000092 INF: FPGA: Xmit ZDACW 31134\n 15-12-21 21:02:04.414 -05 000000055 INF: ====================================== 15-12-21 21:02:04.444 -05 000000089 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:02:04.445 -05 000000089 INF: ====================================== 15-12-21 21:02:04.474 -05 000000055 INF: FPGA: Recv ZDACW 15-12-21 21:02:04.475 -05 000000092 INF: ====================================== 15-12-21 21:02:04.576 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:04.580 -05 000000086 INF: LFT found best fwhm score 2.315615 in 140 ms 15-12-21 21:02:04.580 -05 000000086 INF: LFT found good score at index 2101 with fwhm value 2.315615. Next cycle, cycle 26 starting Z position for bottom surface is at -0.100 mm FC:B, C:25,L:2,B 15-12-21 21:02:04.580 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:04.580 -05 000000086 INF: ====================================== 15-12-21 21:02:04.588 -05 000000023 INF: LFT found best fwhm score 2.56448 in 148 ms 15-12-21 21:02:04.588 -05 000000023 INF: LFT found good score at index 2685 with fwhm value 2.56448. Next cycle, cycle 26 starting Z position for bottom surface is at -0.100 mm FC:B, C:25,L:2,B 15-12-21 21:02:04.589 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:04.589 -05 000000023 INF: ====================================== 15-12-21 21:02:04.604 -05 000000041 INF: LFT found best fwhm score 2.495204 in 164 ms 15-12-21 21:02:04.604 -05 000000041 INF: LFT found good score at index 3333 with fwhm value 2.495204. Next cycle, cycle 26 starting Z position for bottom surface is at -0.100 mm FC:B, C:25,L:2,B 15-12-21 21:02:04.605 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:04.605 -05 000000040 INF: LFT found best fwhm score 2.476076 in 164 ms 15-12-21 21:02:04.605 -05 000000040 INF: LFT found good score at index 8161 with fwhm value 2.476076. Next cycle, cycle 26 starting Z position for bottom surface is at -0.098 mm FC:B, C:25,L:2,B 15-12-21 21:02:04.605 -05 000000040 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:04.605 -05 000000041 INF: ====================================== 15-12-21 21:02:04.605 -05 000000040 INF: ====================================== 15-12-21 21:02:04.609 -05 000000060 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:02:04.610 -05 000000060 INF: LFT weighted average best Z for bottom surface is at -0.099mm FC:B, C:25,L:2,B 15-12-21 21:02:04.611 -05 000000060 INF: ====================================== 15-12-21 21:02:04.615 -05 000000084 INF: ====================================== 15-12-21 21:02:04.617 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.622 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:02:04.622 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.622 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:02:04.623 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.623 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:02:04.623 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.623 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:02:04.623 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:04.624 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:02:04.624 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:02:04.626 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Waiting for image analysis=================== 15-12-21 21:02:04.626 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 21:02:04.626 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:02:04.626 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 21:02:04.626 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:02:04.627 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:02:04.627 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:02:04.627 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:02:04.627 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:02:04.628 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:02:04.629 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging, Bottom Surface=================== 15-12-21 21:02:04.629 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging=================== 15-12-21 21:02:04.633 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:04.633 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:04.633 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging=================== 15-12-21 21:02:04.633 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 21:02:04.633 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:02:04.634 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging=================== 15-12-21 21:02:04.635 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25, Imaging=================== 15-12-21 21:02:04.640 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #25=================== 15-12-21 21:02:04.641 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX)=================== 15-12-21 21:02:04.816 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:02:04.816 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:04.868 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26=================== 15-12-21 21:02:04.869 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle=================== 15-12-21 21:02:04.870 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:04.870 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:04.871 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:04.884 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:04.933 -05 000000068 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204=================== 15-12-21 21:02:04.933 -05 000000079 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204=================== 15-12-21 21:02:04.934 -05 000000028 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205=================== 15-12-21 21:02:04.934 -05 000000009 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206=================== 15-12-21 21:02:04.934 -05 000000054 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204=================== 15-12-21 21:02:04.934 -05 000000063 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204=================== 15-12-21 21:02:04.934 -05 000000048 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206, Registering and Extracting C025 L002 T2207=================== 15-12-21 21:02:04.937 -05 000000051 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206, Registering and Extracting C025 L002 T2207, Registering and Extracting C025 L002 T2208=================== 15-12-21 21:02:04.957 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 21:02:04.958 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:04.958 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Selecting Reagent USB (5)=================== 15-12-21 21:02:04.959 -05 000000062 INF: Valve B2: Go to position 5 15-12-21 21:02:04.959 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:02:05.021 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 3\r 15-12-21 21:02:05.021 -05 000000062 INF: Valve B2: 210.897 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:02:05.021 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 3 to 5 15-12-21 21:02:05.021 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW5\r 15-12-21 21:02:05.021 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 21:02:05.021 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:02:05.022 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:05.022 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:05.149 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 21:02:05.209 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:02:05.209 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:05.317 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:05.317 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:05.318 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:05.319 -05 000000057 INF: WaitCommand(5000) start 15-12-21 21:02:05.319 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 21:02:05.578 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 21:02:05.578 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:05.579 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 21:02:05.641 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:05.672 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:02:05.672 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:05.772 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:05.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:05.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:06.005 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:02:06.021 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:06.021 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:06.121 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:06.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:06.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:06.246 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:06.273 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 41.108C:A1\r\n 15-12-21 21:02:06.273 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:06.319 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:06.320 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 21:02:06.455 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:06.488 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:02:06.488 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:06.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:06.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:06.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 21:02:06.591 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:06.614 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:06.615 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:06.615 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:06.625 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:02:06.714 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:02:06.800 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 21:02:06.800 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 21:02:06.801 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 21:02:06.900 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P7680R\r 15-12-21 21:02:06.987 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:07.087 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:07.112 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:07.320 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:07.320 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 21:02:07.362 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:07.423 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:07.673 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:07.735 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:07.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:07.861 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:07.861 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:07.960 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:07.985 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:07.989 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:07.989 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:08.049 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:08.091 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:08.112 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:08.112 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:08.299 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:08.321 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:08.322 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 21:02:08.359 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:08.609 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:08.672 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:08.804 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:08.860 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 21:02:08.860 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:08.923 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:08.968 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:08.983 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:09.045 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.980C:A1\r\n 15-12-21 21:02:09.045 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:09.233 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:09.296 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:09.296 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 21:02:09.324 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:09.324 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 21:02:09.342 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:09.358 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:09.358 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:09.396 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:02:09.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:09.484 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 21:02:09.484 -05 000000062 INF: Current Position of Pump is: 7680 15-12-21 21:02:09.484 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:02:09.485 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:09.485 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:09.584 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:02:09.587 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:09.609 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:09.609 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:09.670 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:09.770 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:09.860 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:10.110 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:10.169 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:10.169 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:10.170 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 21:02:10.170 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:10.232 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:02:10.232 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:10.319 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:10.319 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:10.319 -05 000000057 INF: WaitCommand(5000) end 15-12-21 21:02:10.320 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:10.327 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:10.329 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:10.332 -05 000000078 INF: ===================WaitCommand=================== 15-12-21 21:02:10.332 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:02:10.332 -05 000000061 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:02:10.332 -05 000000078 INF: WaitCommand(10000) start 15-12-21 21:02:10.332 -05 000000078 INF: ===================Delay 10 of 10 seconds left=================== 15-12-21 21:02:10.333 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:10.377 -05 000000063 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206=================== 15-12-21 21:02:10.378 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:10.378 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:10.378 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:10.379 -05 000000009 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206=================== 15-12-21 21:02:10.433 -05 000000027 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206, Registering and Extracting C025 L002 T2209=================== 15-12-21 21:02:10.433 -05 000000088 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206, Registering and Extracting C025 L002 T2209, Registering and Extracting C025 L002 T2210=================== 15-12-21 21:02:10.522 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:10.548 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:10.638 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:10.639 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:02:10.639 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:10.713 -05 000000028 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206, Registering and Extracting C025 L002 T2209=================== 15-12-21 21:02:10.714 -05 000000054 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206=================== 15-12-21 21:02:10.738 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 21:02:10.756 -05 000000031 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206, Registering and Extracting C025 L002 T2211=================== 15-12-21 21:02:10.756 -05 000000072 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206, Registering and Extracting C025 L002 T2211, Registering and Extracting C025 L002 T2212=================== 15-12-21 21:02:10.757 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:10.758 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:10.760 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:10.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 21:02:10.762 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 21:02:10.762 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°, FC temperature to 60°=================== 15-12-21 21:02:10.762 -05 000000068 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206, Registering and Extracting C025 L002 T2211=================== 15-12-21 21:02:10.806 -05 000000051 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205, Registering and Extracting C025 L002 T2206=================== 15-12-21 21:02:10.808 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 21:02:10.808 -05 000000061 INF: Current Position of Pump is: 37440 15-12-21 21:02:10.808 -05 000000061 INF: Dispense Steps 48000 is greater than steps to home syringe 37440, reducing number of steps to 37440 15-12-21 21:02:10.808 -05 000000048 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2205=================== 15-12-21 21:02:10.809 -05 000000061 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:02:10.841 -05 000000079 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204=================== 15-12-21 21:02:10.856 -05 000000044 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2213=================== 15-12-21 21:02:10.856 -05 000000020 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2213, Registering and Extracting C025 L002 T2214=================== 15-12-21 21:02:10.856 -05 000000034 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2213, Registering and Extracting C025 L002 T2214, Registering and Extracting C025 L002 T2215=================== 15-12-21 21:02:10.856 -05 000000082 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2213, Registering and Extracting C025 L002 T2214, Registering and Extracting C025 L002 T2215, Registering and Extracting C025 L002 T2216=================== 15-12-21 21:02:10.928 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD37440R\r 15-12-21 21:02:10.947 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:60.00\r 15-12-21 21:02:10.998 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:11.013 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:11.013 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:11.098 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:11.118 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:11.185 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:11.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:11.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:11.289 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 21:02:11.308 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:11.308 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:11.333 -05 000000078 INF: ===================Delay 9 of 10 seconds left=================== 15-12-21 21:02:11.420 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:11.421 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 21:02:11.421 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 21:02:11.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 21:02:11.424 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 21:02:11.471 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:11.472 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:11.499 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:11.499 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:11.499 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:11.557 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:02:11.557 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:11.620 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:11.705 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:11.708 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:11.708 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Selecting Reagent CRM (7)=================== 15-12-21 21:02:11.708 -05 000000062 INF: Valve B2: Go to position 7 15-12-21 21:02:11.709 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:02:11.731 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 37.395C:A1\r\n 15-12-21 21:02:11.731 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:11.764 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 21:02:11.764 -05 000000062 INF: Valve B2: 6.742 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:02:11.764 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 5 to 7 15-12-21 21:02:11.764 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW7\r 15-12-21 21:02:11.765 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 21:02:11.765 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:02:11.841 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:11.861 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:11.861 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:11.870 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:11.966 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:12.216 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:12.277 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:12.336 -05 000000078 INF: ===================Delay 8 of 10 seconds left=================== 15-12-21 21:02:12.339 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 7\r 15-12-21 21:02:12.339 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:12.339 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 21:02:12.339 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:12.402 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:02:12.402 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:12.502 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:02:12.561 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:12.565 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:12.565 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:12.621 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:12.694 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:12.762 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:02:12.762 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:12.871 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:12.893 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:12.894 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 21:02:12.894 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:12.948 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:12.948 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:13.022 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 7, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:02:13.049 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:02:13.077 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 21:02:13.077 -05 000000062 INF: Current Position of Pump is: 7680 15-12-21 21:02:13.078 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7), Aspirating port PortB=================== 15-12-21 21:02:13.177 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P21120R\r 15-12-21 21:02:13.198 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:13.218 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:13.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:13.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:13.284 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:13.284 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:13.336 -05 000000078 INF: ===================Delay 7 of 10 seconds left=================== 15-12-21 21:02:13.384 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:13.385 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:13.461 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:13.462 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:13.462 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:13.534 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:13.607 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:13.613 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:13.669 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:13.669 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:13.711 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:13.790 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:13.863 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:13.914 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:13.969 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:14.039 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 21:02:14.039 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:14.040 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:14.102 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:14.151 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:14.164 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:14.165 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 24.587C:A1\r\n 15-12-21 21:02:14.165 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:14.226 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:14.336 -05 000000078 INF: ===================Delay 6 of 10 seconds left=================== 15-12-21 21:02:14.352 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:14.414 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:14.476 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:14.538 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:14.664 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:14.727 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:14.788 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:14.849 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:14.899 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:14.915 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:14.915 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:14.977 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:15.038 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:15.046 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:15.099 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:15.104 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:15.104 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:15.161 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:15.209 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:15.287 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:15.287 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:15.310 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:15.337 -05 000000027 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2213, Registering and Extracting C025 L002 T2214, Registering and Extracting C025 L002 T2215=================== 15-12-21 21:02:15.338 -05 000000078 INF: ===================Delay 5 of 10 seconds left=================== 15-12-21 21:02:15.351 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:15.411 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:15.473 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:15.569 -05 000000088 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2213, Registering and Extracting C025 L002 T2214=================== 15-12-21 21:02:15.601 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:15.661 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:15.723 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:15.787 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:15.911 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:15.975 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:16.037 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:16.099 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:16.099 -05 000000061 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:02:16.100 -05 000000061 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 21:02:16.199 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 21:02:16.227 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:16.284 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:16.284 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:16.338 -05 000000078 INF: ===================Delay 4 of 10 seconds left=================== 15-12-21 21:02:16.384 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:16.411 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:16.534 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:16.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:16.598 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:16.661 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 21:02:16.661 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:16.661 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:16.664 -05 000000044 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204, Registering and Extracting C025 L002 T2213=================== 15-12-21 21:02:16.722 -05 000000061 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:16.722 -05 000000061 INF: ====================================== 15-12-21 21:02:16.790 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:16.847 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:16.847 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:16.868 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:17.052 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:17.098 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:17.150 -05 000000072 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203, Registering and Extracting C025 L002 T2204=================== 15-12-21 21:02:17.176 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 34.038C:A1\r\n 15-12-21 21:02:17.176 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:17.215 -05 000000031 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202, Registering and Extracting C025 L002 T2203=================== 15-12-21 21:02:17.266 -05 000000082 INF: ===================Registering and Extracting C025 L002 T2201, Registering and Extracting C025 L002 T2202=================== 15-12-21 21:02:17.268 -05 000000034 INF: ===================Registering and Extracting C025 L002 T2201=================== 15-12-21 21:02:17.285 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:17.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:17.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:17.302 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:17.335 -05 000000020 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:02:17.338 -05 000000078 INF: ===================Delay 3 of 10 seconds left=================== 15-12-21 21:02:17.410 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:17.420 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:02:17.426 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:02:17.532 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:02:17.540 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:02:17.631 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:02:17.637 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:02:17.660 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:17.721 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:17.732 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:02:17.737 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:02:17.837 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 21:02:17.971 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:18.034 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:18.284 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:18.339 -05 000000078 INF: ===================Delay 2 of 10 seconds left=================== 15-12-21 21:02:18.344 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:18.588 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:18.594 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:18.611 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:18.611 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:18.656 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:18.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:18.737 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:18.737 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:18.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:18.859 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:18.859 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:18.906 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:18.969 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:19.023 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 21:02:19.140 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:19.173 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.011C:A1\r\n 15-12-21 21:02:19.173 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:19.219 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:19.273 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:19.280 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:19.296 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 31.898C:A1\r\n 15-12-21 21:02:19.296 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:19.339 -05 000000078 INF: ===================Delay 1 of 10 seconds left=================== 15-12-21 21:02:19.530 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:19.593 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:19.843 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:19.904 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:20.088 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:20.109 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:20.109 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:20.154 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:20.210 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:20.217 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:20.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:20.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:20.334 -05 000000078 INF: ===================WaitCommand=================== 15-12-21 21:02:20.335 -05 000000078 INF: WaitCommand(10000) end 15-12-21 21:02:20.335 -05 000000078 INF: ====================================== 15-12-21 21:02:20.337 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:20.338 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:20.340 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:20.341 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:02:20.342 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Chemistry CompleteCycle=================== 15-12-21 21:02:20.342 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29=================== 15-12-21 21:02:20.365 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:20.369 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:20.489 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:20.556 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:20.558 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 21:02:20.564 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.564 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Waiting for imaging module...=================== 15-12-21 21:02:20.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Waiting for analysis...=================== 15-12-21 21:02:20.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Waiting for user to shut the door...=================== 15-12-21 21:02:20.567 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.568 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.569 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Waiting for imaging module...=================== 15-12-21 21:02:20.569 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.569 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Waiting for analysis...=================== 15-12-21 21:02:20.569 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.569 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Waiting for user to shut the door...=================== 15-12-21 21:02:20.569 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.570 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.570 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:02:20.571 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface=================== 15-12-21 21:02:20.571 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface=================== 15-12-21 21:02:20.573 -05 000000057 INF: Compensator: Moving IntoPath 15-12-21 21:02:20.573 -05 000000057 INF: FPGA: Xmit MIOCOMPF\n 15-12-21 21:02:20.663 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:02:20.717 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 21:02:20.717 -05 000000062 INF: Current Position of Pump is: 28800 15-12-21 21:02:20.962 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:02:20.962 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:02:20.963 -05 000000055 INF: FPGA: Recv MIOCOMPF 15-12-21 21:02:20.964 -05 000000057 INF: Compensator: Moved IntoPath in 391 ms 15-12-21 21:02:20.964 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface=================== 15-12-21 21:02:20.965 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface=================== 15-12-21 21:02:20.965 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Aligning=================== 15-12-21 21:02:20.972 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Aligning=================== 15-12-21 21:02:20.973 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Aligning=================== 15-12-21 21:02:20.975 -05 000000041 INF: ===================Move Tilt Motor 1=================== 15-12-21 21:02:20.976 -05 000000041 INF: Tilt Motor 1: Moving to 5.5260 mm, started at 5.3614 mm, delta = 0.1646 mm 15-12-21 21:02:20.976 -05 000000041 INF: FPGA: Xmit T1RD\n 15-12-21 21:02:20.976 -05 000000086 INF: ===================Move Tilt Motor 2=================== 15-12-21 21:02:20.976 -05 000000023 INF: ===================Move Tilt Motor 3=================== 15-12-21 21:02:20.976 -05 000000086 INF: Tilt Motor 2: Moving to 5.3736 mm, started at 5.5075 mm, delta = -0.1339 mm 15-12-21 21:02:20.976 -05 000000023 INF: Tilt Motor 3: Moving to 5.4099 mm, started at 5.5743 mm, delta = -0.1643 mm 15-12-21 21:02:20.980 -05 000000086 INF: FPGA: Xmit T2RD\n 15-12-21 21:02:20.983 -05 000000023 INF: FPGA: Xmit T3RD\n 15-12-21 21:02:21.027 -05 000000040 INF: FPGA: Recv T1RD 21108 15-12-21 21:02:21.027 -05 000000040 INF: FPGA: Recv T2RD 21683 15-12-21 21:02:21.027 -05 000000040 INF: FPGA: Recv T3RD 21944 15-12-21 21:02:21.027 -05 000000086 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 21:02:21.027 -05 000000086 INF: Tilt Motor 2: Moving to 21156 encoder counts 15-12-21 21:02:21.027 -05 000000023 INF: Tilt Motor 3: Encoder: at motor step 3657 + 2/6 15-12-21 21:02:21.027 -05 000000041 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 21:02:21.027 -05 000000041 INF: Tilt Motor 1: Moving to 21756 encoder counts 15-12-21 21:02:21.027 -05 000000086 INF: FPGA: Xmit T2MOVETO 21156\n 15-12-21 21:02:21.027 -05 000000023 INF: Tilt Motor 3: Moving to 21299 encoder counts 15-12-21 21:02:21.028 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:21.029 -05 000000041 INF: FPGA: Xmit T1MOVETO 21756\n 15-12-21 21:02:21.031 -05 000000023 INF: FPGA: Xmit T3MOVETO 21299\n 15-12-21 21:02:21.128 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:21.216 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:21.275 -05 000000038 INF: FPGA: Recv T2MOVETO 87 15-12-21 21:02:21.275 -05 000000038 INF: FPGA: Recv T1MOVETO 107 15-12-21 21:02:21.275 -05 000000086 INF: Tilt Motor 2: To move from 5.507 to 5.374 (-0.134 mm) should take 88 steps, but required 87 steps (0.133 mm). Slippage = -0.002 mm (0.01%) 15-12-21 21:02:21.275 -05 000000086 INF: FPGA: Xmit T2RD\n 15-12-21 21:02:21.275 -05 000000041 INF: Tilt Motor 1: To move from 5.361 to 5.526 (0.165 mm) should take 108 steps, but required 107 steps (0.163 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 21:02:21.276 -05 000000041 INF: FPGA: Xmit T1RD\n 15-12-21 21:02:21.340 -05 000000056 INF: FPGA: Recv T3MOVETO 108 15-12-21 21:02:21.340 -05 000000056 INF: FPGA: Recv T2RD 21162 15-12-21 21:02:21.340 -05 000000056 INF: FPGA: Recv T1RD 21750 15-12-21 21:02:21.340 -05 000000023 INF: Tilt Motor 3: To move from 5.574 to 5.410 (-0.164 mm) should take 108 steps, but required 108 steps (0.165 mm). Slippage = 0.000 mm (0.00%) 15-12-21 21:02:21.340 -05 000000023 INF: FPGA: Xmit T3RD\n 15-12-21 21:02:21.340 -05 000000041 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 21:02:21.340 -05 000000086 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 21:02:21.342 -05 000000086 INF: FPGA: Xmit T2RD\n 15-12-21 21:02:21.344 -05 000000041 INF: FPGA: Xmit T1RD\n 15-12-21 21:02:21.401 -05 000000045 INF: FPGA: Recv T3RD 21300 15-12-21 21:02:21.401 -05 000000045 INF: FPGA: Recv T2RD 21162 15-12-21 21:02:21.401 -05 000000045 INF: FPGA: Recv T1RD 21750 15-12-21 21:02:21.401 -05 000000086 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 21:02:21.401 -05 000000086 INF: FPGA: Xmit T2RD\n 15-12-21 21:02:21.401 -05 000000023 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 21:02:21.401 -05 000000041 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 21:02:21.403 -05 000000023 INF: FPGA: Xmit T3RD\n 15-12-21 21:02:21.405 -05 000000041 INF: FPGA: Xmit T1RD\n 15-12-21 21:02:21.463 -05 000000061 INF: FPGA: Recv T2RD 21162 15-12-21 21:02:21.463 -05 000000061 INF: FPGA: Recv T3RD 21300 15-12-21 21:02:21.463 -05 000000061 INF: FPGA: Recv T1RD 21750 15-12-21 21:02:21.463 -05 000000041 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 21:02:21.463 -05 000000086 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 21:02:21.463 -05 000000086 INF: Tilt Motor 2: After move to 5.3736, error = 0.0015, min/max error = -0.0015/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:02:21.463 -05 000000086 INF: Tilt Motor 2: Moved to 5.3751 after 486.0365 ms 15-12-21 21:02:21.463 -05 000000023 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 21:02:21.463 -05 000000023 INF: FPGA: Xmit T3RD\n 15-12-21 21:02:21.464 -05 000000041 INF: Tilt Motor 1: After move to 5.5260, error = -0.0015, min/max error = -0.0015/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:02:21.464 -05 000000041 INF: Tilt Motor 1: Moved to 5.5245 after 487.0582 ms 15-12-21 21:02:21.464 -05 000000086 INF: ====================================== 15-12-21 21:02:21.464 -05 000000041 INF: ====================================== 15-12-21 21:02:21.467 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:21.528 -05 000000040 INF: FPGA: Recv T3RD 21300 15-12-21 21:02:21.528 -05 000000023 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 21:02:21.528 -05 000000023 INF: Tilt Motor 3: After move to 5.4099, error = 0.0003, min/max error = -0.0015/0.0009, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:02:21.528 -05 000000023 INF: Tilt Motor 3: Moved to 5.4102 after 550.6741 ms 15-12-21 21:02:21.528 -05 000000023 INF: ====================================== 15-12-21 21:02:21.529 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:21.529 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:21.529 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 21:02:21.530 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Aligning=================== 15-12-21 21:02:21.531 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Aligning=================== 15-12-21 21:02:21.534 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface=================== 15-12-21 21:02:21.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface=================== 15-12-21 21:02:21.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:02:21.564 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:02:21.567 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:02:21.672 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:02:21.673 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:02:21.673 -05 000000057 INF: Compensator: Remaining IntoPath 15-12-21 21:02:21.674 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:02:21.675 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:02:21.708 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:02:21.709 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:02:21.724 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:21.724 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:02:21.724 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:21.724 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -118.8 um, section = A_1 15-12-21 21:02:21.727 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:02:21.728 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:02:21.729 -05 000000092 INF: ===================MoveEmissionFilters=================== 15-12-21 21:02:21.729 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:02:21.729 -05 000000089 INF: ===================Move X,Y=================== 15-12-21 21:02:21.738 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:02:21.738 -05 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:02:21.739 -05 000000089 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:02:21.739 -05 000000078 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:02:21.739 -05 000000078 INF: Z Motor: Moving to -0.1615 mm, started at -0.1188 mm 15-12-21 21:02:21.739 -05 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:02:21.739 -05 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:02:21.739 -05 000000078 INF: FPGA: Xmit ZTRG 0\n 15-12-21 21:02:21.743 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:02:21.746 -05 000000023 INF: ===================Move X Motor without settling=================== 15-12-21 21:02:21.746 -05 000000045 INF: ===================Move Y Motor without settling=================== 15-12-21 21:02:21.746 -05 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:02:21.746 -05 000000023 INF: X Motor: Xmit PR VM\n 15-12-21 21:02:21.746 -05 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:02:21.747 -05 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:02:21.756 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:02:21.756 -05 000000055 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:02:21.760 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:21.760 -05 000000061 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:02:21.760 -05 000000040 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:02:21.760 -05 000000041 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:02:21.778 -05 000000045 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 21:02:21.778 -05 000000045 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:02:21.781 -05 000000045 INF: Y Motor: Xmit 1G\n 15-12-21 21:02:21.782 -05 000000041 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:02:21.782 -05 000000055 INF: ====================================== 15-12-21 21:02:21.785 -05 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:02:21.785 -05 000000056 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:02:21.785 -05 000000041 INF: ====================================== 15-12-21 21:02:21.789 -05 000000061 INF: ====================================== 15-12-21 21:02:21.790 -05 000000038 INF: ====================================== 15-12-21 21:02:21.792 -05 000000040 INF: ====================================== 15-12-21 21:02:21.794 -05 000000056 INF: ====================================== 15-12-21 21:02:21.795 -05 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:02:21.795 -05 000000038 INF: FPGA: Recv ZTRG 15-12-21 21:02:21.797 -05 000000078 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 21:02:21.798 -05 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:02:21.801 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:02:21.802 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:21.802 -05 000000055 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:02:21.806 -05 000000023 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:02:21.806 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:02:21.806 -05 000000023 INF: X Motor: Xmit PR VI\n 15-12-21 21:02:21.807 -05 000000055 INF: ====================================== 15-12-21 21:02:21.807 -05 000000038 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:02:21.811 -05 000000060 INF: ====================================== 15-12-21 21:02:21.813 -05 000000038 INF: ====================================== 15-12-21 21:02:21.816 -05 000000037 INF: ====================================== 15-12-21 21:02:21.820 -05 000000086 INF: ====================================== 15-12-21 21:02:21.824 -05 000000084 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:02:21.837 -05 000000084 INF: ====================================== 15-12-21 21:02:21.846 -05 000000092 INF: ====================================== 15-12-21 21:02:21.855 -05 000000038 INF: FPGA: Recv ZYT 15-12-21 21:02:21.855 -05 000000078 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 21:02:21.855 -05 000000078 INF: FPGA: Xmit ZMV 42334\n 15-12-21 21:02:21.857 -05 000000023 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:02:21.857 -05 000000023 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:02:21.857 -05 000000023 INF: X Motor: Moving to 12.8720 mm @15.000 mm/sec, started at 81.0288 mm 15-12-21 21:02:21.857 -05 000000045 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:02:21.857 -05 000000023 INF: X Motor: Xmit MA -18894\n 15-12-21 21:02:21.858 -05 000000045 INF: Y Motor: Recv 1G\r\n 15-12-21 21:02:21.859 -05 000000045 INF: Y Motor: Xmit 1D\n 15-12-21 21:02:21.915 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:21.916 -05 000000086 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 21:02:21.916 -05 000000086 INF: FPGA: Recv ZMV 15-12-21 21:02:21.916 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 21:02:21.916 -05 000000078 INF: Z Motor: MoveAndTrigger 'ZMV' command took 61.6437 ms 15-12-21 21:02:21.916 -05 000000078 INF: FPGA: Xmit ZDACR\n 15-12-21 21:02:21.919 -05 000000045 INF: Y Motor: Recv 1D\r\n 15-12-21 21:02:21.920 -05 000000023 INF: X Motor: Recv MA -18894\r\n> 15-12-21 21:02:21.920 -05 000000045 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:02:21.920 -05 000000023 INF: X Motor: WaitUntilStopped 64544 15-12-21 21:02:21.921 -05 000000045 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:02:21.978 -05 000000040 INF: FPGA: Recv ZDACR 42334 15-12-21 21:02:21.978 -05 000000078 INF: Z Motor: MoveAndTrigger took 239.6551 ms w/comms 15-12-21 21:02:21.978 -05 000000078 INF: Z Motor: After move to -0.1615, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:02:21.978 -05 000000078 INF: Z Motor: MoveAbsStepped took 239.7318 ms 15-12-21 21:02:21.979 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:02:21.980 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:21.980 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:21.983 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:02:21.988 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 21:02:21.993 -05 000000060 INF: ===================Camera Arm TDI=================== 15-12-21 21:02:21.994 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:22.001 -05 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:02:22.001 -05 000000092 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:02:22.002 -05 000000092 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:02:22.041 -05 000000061 INF: FPGA: Recv ZSEL 15-12-21 21:02:22.041 -05 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:02:22.042 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:22.044 -05 000000092 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:02:22.045 -05 000000092 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:02:22.047 -05 000000092 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:02:22.079 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:02:22.103 -05 000000056 INF: FPGA: Recv ZSTEP 15-12-21 21:02:22.103 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:22.105 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:22.105 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:22.109 -05 000000092 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:02:22.116 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:22.129 -05 000000092 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:02:22.129 -05 000000092 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:02:22.130 -05 000000092 INF: Z Motor: Arming to move to -0.1215 mm 15-12-21 21:02:22.130 -05 000000092 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:02:22.165 -05 000000061 INF: FPGA: Recv ZYT 15-12-21 21:02:22.165 -05 000000092 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907647 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:02:22.165 -05 000000092 INF: FPGA: Xmit ZARM 31848\n 15-12-21 21:02:22.203 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:22.231 -05 000000086 INF: FPGA: Recv ZARM 15-12-21 21:02:22.231 -05 000000092 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 66.419 ms 15-12-21 21:02:22.232 -05 000000092 INF: Z Motor: ArmAbsStepped took 101.9557 ms 15-12-21 21:02:22.232 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:22.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:22.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:22.234 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 21:02:22.247 -05 000000092 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:02:22.247 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 21:02:22.260 -05 000000092 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:02:22.260 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 21:02:22.267 -05 000000092 INF: ====================================== 15-12-21 21:02:22.337 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:22.356 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:02:22.356 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:22.467 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:22.467 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:22.467 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:22.469 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:22.469 -05 000000062 INF: WaitCommand(5000) start 15-12-21 21:02:22.469 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 21:02:22.479 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 30.976C:A1\r\n 15-12-21 21:02:22.479 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:22.587 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:22.605 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:22.605 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:22.850 -05 000000060 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:02:22.850 -05 000000060 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:02:22.850 -05 000000060 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:02:23.475 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:23.475 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 21:02:23.599 -05 000000060 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:02:23.599 -05 000000060 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:02:23.599 -05 000000060 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:02:23.600 -05 000000060 INF: ====================================== 15-12-21 21:02:23.607 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:02:23.608 -05 000000078 INF: ====================================== 15-12-21 21:02:23.827 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:23.852 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:23.852 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:23.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:23.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:23.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:24.084 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:24.102 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:24.102 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:24.274 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:24.292 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 21:02:24.292 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:24.401 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:24.416 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 38.284C:A1\r\n 15-12-21 21:02:24.416 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:24.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:24.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 21:02:25.328 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:25.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:25.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:25.450 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:25.476 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:25.476 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:25.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:25.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 21:02:25.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:25.599 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:25.599 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:25.788 -05 000000045 INF: Y Motor: Moved to 70.6886 after 3867 ms 15-12-21 21:02:25.788 -05 000000045 INF: ====================================== 15-12-21 21:02:26.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:26.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 21:02:26.822 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:26.848 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:26.848 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:26.948 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:26.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:26.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:27.024 -05 000000023 INF: X Motor: Xmit PR ER\n 15-12-21 21:02:27.077 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:27.082 -05 000000023 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:02:27.082 -05 000000023 INF: X Motor: Moved to 12.8696 after 5162 ms 15-12-21 21:02:27.083 -05 000000023 INF: ====================================== 15-12-21 21:02:27.086 -05 000000089 INF: ===================Move X,Y=================== 15-12-21 21:02:27.091 -05 000000089 INF: ====================================== 15-12-21 21:02:27.099 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:02:27.101 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:27.103 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:02:27.158 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:27.158 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:27.158 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:02:27.159 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:02:27.222 -05 000000045 INF: FPGA: Recv ZFREQCL 15-12-21 21:02:27.223 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:02:27.223 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:27.224 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:02:27.283 -05 000000045 INF: FPGA: Recv TDIYERD 7068849 15-12-21 21:02:27.283 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 21:02:27.284 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:02:27.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:02:27.294 -05 000000084 INF: ===================TDI FPGA Arm=================== 15-12-21 21:02:27.294 -05 000000029 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:02:27.294 -05 000000029 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:02:27.296 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:02:27.298 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:02:27.298 -05 000000084 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:02:27.346 -05 000000061 INF: FPGA: Recv TDIYPOS 15-12-21 21:02:27.347 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:02:27.349 -05 000000029 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:02:27.349 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:02:27.349 -05 000000084 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:02:27.350 -05 000000029 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:02:27.350 -05 000000029 INF: ====================================== 15-12-21 21:02:27.415 -05 000000023 INF: FPGA: Recv TDIYARM3 15-12-21 21:02:27.453 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:02:27.456 -05 000000084 INF: ===================TDI FPGA Arm=================== 15-12-21 21:02:27.457 -05 000000084 INF: ====================================== 15-12-21 21:02:27.461 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:02:27.462 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:27.462 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:27.462 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:27.463 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:27.464 -05 000000060 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:02:27.465 -05 000000060 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:02:27.465 -05 000000060 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:02:27.465 -05 000000060 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:02:27.465 -05 000000060 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:02:27.466 -05 000000045 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:02:27.466 -05 000000045 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:02:27.466 -05 000000045 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:02:27.466 -05 000000045 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:02:27.467 -05 000000045 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:02:27.471 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:27.471 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:27.471 -05 000000062 INF: WaitCommand(5000) end 15-12-21 21:02:27.471 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:27.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:27.478 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:27.482 -05 000000086 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:02:27.482 -05 000000090 INF: ===================WaitCommand=================== 15-12-21 21:02:27.482 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:27.482 -05 000000090 INF: WaitCommand(15000) start 15-12-21 21:02:27.484 -05 000000090 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 21:02:27.518 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:27.587 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:27.618 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:27.625 -05 000000040 INF: FPGA: Recv EX1MV 15-12-21 21:02:27.625 -05 000000045 INF: Excitation Filter 1: Moved -36 steps in 158.6996 ms 15-12-21 21:02:27.625 -05 000000045 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 158.7935 ms 15-12-21 21:02:27.625 -05 000000045 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 158.8668 ms 15-12-21 21:02:27.626 -05 000000045 INF: ====================================== 15-12-21 21:02:27.627 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 28.228C:A1\r\n 15-12-21 21:02:27.627 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:27.662 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:27.762 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:02:27.848 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 21:02:27.848 -05 000000086 INF: Current Position of Pump is: 28800 15-12-21 21:02:27.848 -05 000000086 INF: Dispense Steps 48000 is greater than steps to home syringe 28800, reducing number of steps to 28800 15-12-21 21:02:27.848 -05 000000086 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:02:27.875 -05 000000025 INF: FPGA: Recv EX2MV 15-12-21 21:02:27.875 -05 000000060 INF: Excitation Filter 2: Moved -107 steps in 410.3041 ms 15-12-21 21:02:27.875 -05 000000060 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 410.3958 ms 15-12-21 21:02:27.875 -05 000000060 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 410.4602 ms 15-12-21 21:02:27.876 -05 000000060 INF: ====================================== 15-12-21 21:02:27.880 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:27.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:27.885 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:02:27.888 -05 000000037 INF: ===================Move Y Motor without settling=================== 15-12-21 21:02:27.888 -05 000000038 INF: ===================Camera TDI=================== 15-12-21 21:02:27.888 -05 000000045 INF: ===================FPGA Z Wait=================== 15-12-21 21:02:27.888 -05 000000037 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 21:02:27.888 -05 000000045 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:02:27.889 -05 000000061 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:02:27.889 -05 000000037 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:02:27.890 -05 000000038 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:02:27.893 -05 000000061 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:02:27.893 -05 000000037 INF: Y Motor: Xmit 1G\n 15-12-21 21:02:27.897 -05 000000029 INF: ===================Camera TDI=================== 15-12-21 21:02:27.897 -05 000000092 INF: ===================Camera TDI=================== 15-12-21 21:02:27.913 -05 000000037 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:02:27.949 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD28800R\r 15-12-21 21:02:27.971 -05 000000037 INF: Y Motor: Recv 1G\r\n 15-12-21 21:02:27.972 -05 000000037 INF: Y Motor: Xmit 1D\n 15-12-21 21:02:28.033 -05 000000037 INF: Y Motor: Recv 1D\r\n 15-12-21 21:02:28.033 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:28.034 -05 000000037 INF: Y Motor: Recv *407662\r\n 15-12-21 21:02:28.035 -05 000000037 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:02:28.133 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:28.157 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:28.249 -05 000000056 INF: FPGA: Recv ZWAIT 15-12-21 21:02:28.250 -05 000000045 INF: ====================================== 15-12-21 21:02:28.352 -05 000000092 INF: ===================Frame #1=================== 15-12-21 21:02:28.355 -05 000000029 INF: ===================Frame #1=================== 15-12-21 21:02:28.419 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:28.420 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:28.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:28.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:28.473 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:28.485 -05 000000090 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 21:02:28.502 -05 000000092 INF: ===================Frame #13=================== 15-12-21 21:02:28.505 -05 000000029 INF: ===================Frame #13=================== 15-12-21 21:02:28.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:28.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:28.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:28.652 -05 000000092 INF: ===================Frame #25=================== 15-12-21 21:02:28.655 -05 000000029 INF: ===================Frame #25=================== 15-12-21 21:02:28.667 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:28.689 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:28.689 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:28.724 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:28.792 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:28.803 -05 000000092 INF: ===================Frame #37=================== 15-12-21 21:02:28.805 -05 000000029 INF: ===================Frame #37=================== 15-12-21 21:02:28.953 -05 000000092 INF: ===================Frame #48=================== 15-12-21 21:02:28.955 -05 000000029 INF: ===================Frame #49=================== 15-12-21 21:02:29.042 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:29.092 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:29.106 -05 000000029 INF: ===================Frame #61=================== 15-12-21 21:02:29.157 -05 000000092 INF: ===================Frame #65=================== 15-12-21 21:02:29.257 -05 000000029 INF: ===================Frame #72=================== 15-12-21 21:02:29.307 -05 000000092 INF: ===================Frame #76=================== 15-12-21 21:02:29.342 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:29.390 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:29.406 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:29.437 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 21:02:29.437 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:29.485 -05 000000090 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 21:02:29.490 -05 000000029 INF: ===================Frame #91=================== 15-12-21 21:02:29.497 -05 000000092 INF: ===================Frame #92=================== 15-12-21 21:02:29.542 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:29.625 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 44.196C:A1\r\n 15-12-21 21:02:29.625 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:29.640 -05 000000029 INF: ===================Frame #103=================== 15-12-21 21:02:29.661 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:29.662 -05 000000092 INF: ===================Frame #105=================== 15-12-21 21:02:29.732 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:29.791 -05 000000029 INF: ===================Frame #115=================== 15-12-21 21:02:29.812 -05 000000092 INF: ===================Frame #116=================== 15-12-21 21:02:29.918 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:29.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:29.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:29.941 -05 000000029 INF: ===================Frame #127=================== 15-12-21 21:02:29.982 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:29.988 -05 000000092 INF: ===================Frame #130=================== 15-12-21 21:02:30.043 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:30.045 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:30.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:30.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:30.091 -05 000000029 INF: ===================Frame #138=================== 15-12-21 21:02:30.158 -05 000000092 INF: ===================Frame #144=================== 15-12-21 21:02:30.160 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:30.188 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:30.188 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:30.295 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:30.316 -05 000000029 INF: ===================Frame #156=================== 15-12-21 21:02:30.338 -05 000000092 INF: ===================Frame #158=================== 15-12-21 21:02:30.356 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:30.486 -05 000000090 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 21:02:30.486 -05 000000029 INF: ===================Frame #170=================== 15-12-21 21:02:30.505 -05 000000092 INF: ===================Frame #171=================== 15-12-21 21:02:30.606 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:30.655 -05 000000029 INF: ===================Frame #183=================== 15-12-21 21:02:30.657 -05 000000092 INF: ===================Frame #183=================== 15-12-21 21:02:30.670 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:30.805 -05 000000029 INF: ===================Frame #195=================== 15-12-21 21:02:30.807 -05 000000092 INF: ===================Frame #195=================== 15-12-21 21:02:30.920 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:30.956 -05 000000029 INF: ===================Frame #207=================== 15-12-21 21:02:30.957 -05 000000092 INF: ===================Frame #207=================== 15-12-21 21:02:30.981 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:31.106 -05 000000029 INF: ===================Frame #219=================== 15-12-21 21:02:31.107 -05 000000092 INF: ===================Frame #219=================== 15-12-21 21:02:31.231 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:31.257 -05 000000092 INF: ===================Frame #231=================== 15-12-21 21:02:31.257 -05 000000029 INF: ===================Frame #231=================== 15-12-21 21:02:31.299 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:31.409 -05 000000029 INF: ===================Frame #243=================== 15-12-21 21:02:31.409 -05 000000092 INF: ===================Frame #243=================== 15-12-21 21:02:31.412 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:31.437 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:31.437 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:31.487 -05 000000090 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 21:02:31.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:31.550 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:31.561 -05 000000092 INF: ===================Frame #255=================== 15-12-21 21:02:31.561 -05 000000029 INF: ===================Frame #255=================== 15-12-21 21:02:31.562 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:31.562 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:31.609 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:31.667 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:31.686 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:31.686 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:31.711 -05 000000092 INF: ===================Frame #266=================== 15-12-21 21:02:31.712 -05 000000029 INF: ===================Frame #266=================== 15-12-21 21:02:31.859 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:31.919 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:31.920 -05 000000086 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:02:31.920 -05 000000086 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 21:02:32.020 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:02:32.040 -05 000000029 INF: ===================Frame #292=================== 15-12-21 21:02:32.052 -05 000000092 INF: ===================Frame #293=================== 15-12-21 21:02:32.104 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:32.203 -05 000000092 INF: ===================Frame #305=================== 15-12-21 21:02:32.204 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:32.223 -05 000000029 INF: ===================Frame #307=================== 15-12-21 21:02:32.294 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:32.353 -05 000000092 INF: ===================Frame #317=================== 15-12-21 21:02:32.373 -05 000000029 INF: ===================Frame #319=================== 15-12-21 21:02:32.487 -05 000000090 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 21:02:32.504 -05 000000092 INF: ===================Frame #329=================== 15-12-21 21:02:32.525 -05 000000029 INF: ===================Frame #331=================== 15-12-21 21:02:32.544 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:32.604 -05 000000086 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:32.605 -05 000000086 INF: ====================================== 15-12-21 21:02:32.654 -05 000000092 INF: ===================Frame #341=================== 15-12-21 21:02:32.675 -05 000000029 INF: ===================Frame #343=================== 15-12-21 21:02:32.730 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:32.746 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 25.708C:A1\r\n 15-12-21 21:02:32.746 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:32.805 -05 000000092 INF: ===================Frame #353=================== 15-12-21 21:02:32.825 -05 000000029 INF: ===================Frame #355=================== 15-12-21 21:02:32.956 -05 000000092 INF: ===================Frame #365=================== 15-12-21 21:02:32.975 -05 000000029 INF: ===================Frame #366=================== 15-12-21 21:02:33.034 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:33.057 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:33.057 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:33.107 -05 000000092 INF: ===================Frame #377=================== 15-12-21 21:02:33.158 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:33.183 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:33.183 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:33.219 -05 000000029 INF: ===================Frame #386=================== 15-12-21 21:02:33.257 -05 000000092 INF: ===================Frame #389=================== 15-12-21 21:02:33.292 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:33.308 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:33.308 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:33.397 -05 000000029 INF: ===================Frame #400=================== 15-12-21 21:02:33.407 -05 000000092 INF: ===================Frame #401=================== 15-12-21 21:02:33.487 -05 000000090 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 21:02:33.558 -05 000000092 INF: ===================Frame #412=================== 15-12-21 21:02:33.571 -05 000000029 INF: ===================Frame #414=================== 15-12-21 21:02:33.751 -05 000000029 INF: ===================Frame #428=================== 15-12-21 21:02:33.927 -05 000000092 INF: ===================Frame #442=================== 15-12-21 21:02:33.934 -05 000000029 INF: ===================Frame #442=================== 15-12-21 21:02:34.116 -05 000000029 INF: ===================Frame #457=================== 15-12-21 21:02:34.133 -05 000000092 INF: ===================Frame #458=================== 15-12-21 21:02:34.266 -05 000000029 INF: ===================Frame #468=================== 15-12-21 21:02:34.300 -05 000000092 INF: ===================Frame #471=================== 15-12-21 21:02:34.451 -05 000000029 INF: ===================Frame #483=================== 15-12-21 21:02:34.451 -05 000000092 INF: ===================Frame #483=================== 15-12-21 21:02:34.488 -05 000000090 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 21:02:34.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:34.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:34.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:34.601 -05 000000029 INF: ===================Frame #495=================== 15-12-21 21:02:34.602 -05 000000092 INF: ===================Frame #495=================== 15-12-21 21:02:34.656 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:34.680 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 21:02:34.680 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:34.751 -05 000000029 INF: ===================Frame #507=================== 15-12-21 21:02:34.752 -05 000000092 INF: ===================Frame #507=================== 15-12-21 21:02:34.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:34.806 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:34.806 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:34.902 -05 000000029 INF: ===================Frame #519=================== 15-12-21 21:02:34.903 -05 000000092 INF: ===================Frame #519=================== 15-12-21 21:02:34.913 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:34.929 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 49.781C:A1\r\n 15-12-21 21:02:34.929 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:35.038 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:35.054 -05 000000092 INF: ===================Frame #531=================== 15-12-21 21:02:35.054 -05 000000029 INF: ===================Frame #531=================== 15-12-21 21:02:35.055 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:35.055 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:35.204 -05 000000029 INF: ===================Frame #543=================== 15-12-21 21:02:35.204 -05 000000092 INF: ===================Frame #543=================== 15-12-21 21:02:35.356 -05 000000092 INF: ===================Frame #555=================== 15-12-21 21:02:35.356 -05 000000029 INF: ===================Frame #555=================== 15-12-21 21:02:35.488 -05 000000090 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 21:02:35.507 -05 000000029 INF: ===================Frame #567=================== 15-12-21 21:02:35.507 -05 000000092 INF: ===================Frame #567=================== 15-12-21 21:02:35.658 -05 000000029 INF: ===================Frame #578=================== 15-12-21 21:02:35.658 -05 000000092 INF: ===================Frame #578=================== 15-12-21 21:02:36.010 -05 000000029 INF: ===================Frame #606=================== 15-12-21 21:02:36.018 -05 000000092 INF: ===================Frame #607=================== 15-12-21 21:02:36.168 -05 000000092 INF: ===================Frame #619=================== 15-12-21 21:02:36.190 -05 000000029 INF: ===================Frame #621=================== 15-12-21 21:02:36.281 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:36.301 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:36.301 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:36.318 -05 000000092 INF: ===================Frame #631=================== 15-12-21 21:02:36.342 -05 000000029 INF: ===================Frame #632=================== 15-12-21 21:02:36.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:36.428 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:36.428 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:36.470 -05 000000092 INF: ===================Frame #643=================== 15-12-21 21:02:36.488 -05 000000090 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 21:02:36.523 -05 000000029 INF: ===================Frame #647=================== 15-12-21 21:02:36.536 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:36.553 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:36.553 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:36.620 -05 000000092 INF: ===================Frame #655=================== 15-12-21 21:02:36.673 -05 000000029 INF: ===================Frame #659=================== 15-12-21 21:02:36.771 -05 000000092 INF: ===================Frame #667=================== 15-12-21 21:02:36.823 -05 000000029 INF: ===================Frame #671=================== 15-12-21 21:02:36.922 -05 000000092 INF: ===================Frame #678=================== 15-12-21 21:02:36.975 -05 000000029 INF: ===================Frame #683=================== 15-12-21 21:02:37.126 -05 000000029 INF: ===================Frame #695=================== 15-12-21 21:02:37.194 -05 000000092 INF: ===================Frame #700=================== 15-12-21 21:02:37.276 -05 000000029 INF: ===================Frame #706=================== 15-12-21 21:02:37.376 -05 000000092 INF: ===================Frame #714=================== 15-12-21 21:02:37.488 -05 000000090 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 21:02:37.552 -05 000000029 INF: ===================Frame #728=================== 15-12-21 21:02:37.558 -05 000000092 INF: ===================Frame #729=================== 15-12-21 21:02:37.708 -05 000000092 INF: ===================Frame #741=================== 15-12-21 21:02:37.732 -05 000000029 INF: ===================Frame #742=================== 15-12-21 21:02:37.773 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:37.801 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:37.801 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:37.859 -05 000000092 INF: ===================Frame #753=================== 15-12-21 21:02:37.904 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:37.904 -05 000000029 INF: ===================Frame #756=================== 15-12-21 21:02:37.924 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 23.346C:A1\r\n 15-12-21 21:02:37.924 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:38.011 -05 000000092 INF: ===================Frame #764=================== 15-12-21 21:02:38.023 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:38.050 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:38.050 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:38.083 -05 000000029 INF: ===================Frame #770=================== 15-12-21 21:02:38.148 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:38.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:38.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:38.238 -05 000000092 INF: ===================Frame #783=================== 15-12-21 21:02:38.254 -05 000000029 INF: ===================Frame #784=================== 15-12-21 21:02:38.389 -05 000000092 INF: ===================Frame #794=================== 15-12-21 21:02:38.420 -05 000000029 INF: ===================Frame #797=================== 15-12-21 21:02:38.491 -05 000000090 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 21:02:38.572 -05 000000029 INF: ===================Frame #809=================== 15-12-21 21:02:38.574 -05 000000092 INF: ===================Frame #809=================== 15-12-21 21:02:38.723 -05 000000029 INF: ===================Frame #821=================== 15-12-21 21:02:38.724 -05 000000092 INF: ===================Frame #821=================== 15-12-21 21:02:38.874 -05 000000029 INF: ===================Frame #833=================== 15-12-21 21:02:38.874 -05 000000092 INF: ===================Frame #833=================== 15-12-21 21:02:39.024 -05 000000092 INF: ===================Frame #845=================== 15-12-21 21:02:39.025 -05 000000029 INF: ===================Frame #845=================== 15-12-21 21:02:39.175 -05 000000029 INF: ===================Frame #857=================== 15-12-21 21:02:39.175 -05 000000092 INF: ===================Frame #857=================== 15-12-21 21:02:39.327 -05 000000029 INF: ===================Frame #869=================== 15-12-21 21:02:39.327 -05 000000092 INF: ===================Frame #869=================== 15-12-21 21:02:39.400 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:39.422 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:39.422 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:39.477 -05 000000092 INF: ===================Frame #880=================== 15-12-21 21:02:39.477 -05 000000029 INF: ===================Frame #880=================== 15-12-21 21:02:39.491 -05 000000090 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 21:02:39.521 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:39.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:39.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:39.648 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:39.672 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:39.672 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:39.784 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:39.791 -05 000000092 INF: ===================Frame #905=================== 15-12-21 21:02:39.806 -05 000000029 INF: ===================Frame #906=================== 15-12-21 21:02:39.860 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 21:02:39.860 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:39.942 -05 000000092 INF: ===================Frame #917=================== 15-12-21 21:02:39.991 -05 000000029 INF: ===================Frame #921=================== 15-12-21 21:02:40.038 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:40.093 -05 000000092 INF: ===================Frame #929=================== 15-12-21 21:02:40.107 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 54.610C:A1\r\n 15-12-21 21:02:40.107 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:40.142 -05 000000029 INF: ===================Frame #933=================== 15-12-21 21:02:40.243 -05 000000092 INF: ===================Frame #941=================== 15-12-21 21:02:40.292 -05 000000029 INF: ===================Frame #945=================== 15-12-21 21:02:40.394 -05 000000092 INF: ===================Frame #953=================== 15-12-21 21:02:40.442 -05 000000029 INF: ===================Frame #957=================== 15-12-21 21:02:40.491 -05 000000090 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 21:02:40.545 -05 000000092 INF: ===================Frame #965=================== 15-12-21 21:02:40.593 -05 000000029 INF: ===================Frame #969=================== 15-12-21 21:02:40.695 -05 000000092 INF: ===================Frame #977=================== 15-12-21 21:02:40.743 -05 000000029 INF: ===================Frame #981=================== 15-12-21 21:02:40.845 -05 000000092 INF: ===================Frame #989=================== 15-12-21 21:02:40.893 -05 000000029 INF: ===================Frame #992=================== 15-12-21 21:02:40.900 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:40.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:40.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:40.996 -05 000000092 INF: ===================Frame #1001=================== 15-12-21 21:02:41.022 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:41.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:41.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:41.147 -05 000000092 INF: ===================Frame #1012=================== 15-12-21 21:02:41.151 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:41.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:41.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:41.180 -05 000000029 INF: ===================Frame #1015=================== 15-12-21 21:02:41.330 -05 000000029 INF: ===================Frame #1027=================== 15-12-21 21:02:41.477 -05 000000092 INF: ===================Frame #1039=================== 15-12-21 21:02:41.482 -05 000000029 INF: ===================Frame #1039=================== 15-12-21 21:02:41.493 -05 000000090 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 21:02:41.627 -05 000000092 INF: ===================Frame #1050=================== 15-12-21 21:02:41.632 -05 000000029 INF: ===================Frame #1051=================== 15-12-21 21:02:41.785 -05 000000029 INF: ===================Frame #1063=================== 15-12-21 21:02:41.825 -05 000000092 INF: ===================Frame #1066=================== 15-12-21 21:02:41.935 -05 000000029 INF: ===================Frame #1075=================== 15-12-21 21:02:41.994 -05 000000092 INF: ===================Frame #1079=================== 15-12-21 21:02:42.086 -05 000000029 INF: ===================Frame #1087=================== 15-12-21 21:02:42.145 -05 000000092 INF: ===================Frame #1091=================== 15-12-21 21:02:42.237 -05 000000029 INF: ===================Frame #1099=================== 15-12-21 21:02:42.295 -05 000000092 INF: ===================Frame #1103=================== 15-12-21 21:02:42.388 -05 000000029 INF: ===================Frame #1111=================== 15-12-21 21:02:42.446 -05 000000092 INF: ===================Frame #1115=================== 15-12-21 21:02:42.456 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:42.482 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:42.482 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:42.484 -05 000000090 INF: ===================WaitCommand=================== 15-12-21 21:02:42.484 -05 000000090 INF: WaitCommand(15000) end 15-12-21 21:02:42.485 -05 000000090 INF: ====================================== 15-12-21 21:02:42.491 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:42.493 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:42.500 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:42.501 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:42.540 -05 000000029 INF: ===================Frame #1122=================== 15-12-21 21:02:42.588 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:42.590 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:42.590 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Selecting Reagent CWM (8)=================== 15-12-21 21:02:42.591 -05 000000062 INF: Valve B2: Go to position 8 15-12-21 21:02:42.591 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:02:42.597 -05 000000092 INF: ===================Frame #1127=================== 15-12-21 21:02:42.605 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:42.605 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:42.650 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 7\r 15-12-21 21:02:42.650 -05 000000062 INF: Valve B2: 30.884 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:02:42.650 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 7 to 8 15-12-21 21:02:42.650 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW8\r 15-12-21 21:02:42.651 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 21:02:42.651 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:02:42.709 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:42.731 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:42.731 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:42.747 -05 000000092 INF: ===================Frame #1139=================== 15-12-21 21:02:42.899 -05 000000092 INF: ===================Frame #1151=================== 15-12-21 21:02:42.907 -05 000000029 INF: ===================Frame #1152=================== 15-12-21 21:02:43.025 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:43.028 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 8\r 15-12-21 21:02:43.028 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:43.028 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 21:02:43.042 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 21.144C:A1\r\n 15-12-21 21:02:43.042 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:43.049 -05 000000092 INF: ===================Frame #1163=================== 15-12-21 21:02:43.114 -05 000000029 INF: ===================Frame #1168=================== 15-12-21 21:02:43.147 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:43.168 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:02:43.168 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:43.199 -05 000000092 INF: ===================Frame #1175=================== 15-12-21 21:02:43.271 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:02:43.284 -05 000000029 INF: ===================Frame #1181=================== 15-12-21 21:02:43.292 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:43.292 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:43.353 -05 000000092 INF: ===================Frame #1187=================== 15-12-21 21:02:43.399 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:43.418 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:02:43.418 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:43.436 -05 000000029 INF: ===================Frame #1193=================== 15-12-21 21:02:43.504 -05 000000092 INF: ===================Frame #1199=================== 15-12-21 21:02:43.526 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:43.526 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 21:02:43.527 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:43.587 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:43.587 -05 000000029 INF: ===================Frame #1205=================== 15-12-21 21:02:43.596 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:02:43.656 -05 000000092 INF: ===================Frame #1211=================== 15-12-21 21:02:43.687 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:02:43.737 -05 000000029 INF: ===================Frame #1217=================== 15-12-21 21:02:43.775 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 21:02:43.775 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 21:02:43.775 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 21:02:43.806 -05 000000092 INF: ===================Frame #1223=================== 15-12-21 21:02:43.875 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P4608R\r 15-12-21 21:02:43.888 -05 000000029 INF: ===================Frame #1229=================== 15-12-21 21:02:43.957 -05 000000092 INF: ===================Frame #1235=================== 15-12-21 21:02:43.960 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:43.962 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:43.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:43.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:44.040 -05 000000029 INF: ===================Frame #1241=================== 15-12-21 21:02:44.065 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:44.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:44.107 -05 000000092 INF: ===================Frame #1246=================== 15-12-21 21:02:44.149 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:44.163 -05 000000090 INF: FPGA: Recv TDIYWAIT 15-12-21 21:02:44.164 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:02:44.165 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:44.165 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:44.170 -05 000000061 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:02:44.177 -05 000000078 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:02:44.177 -05 000000055 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:02:44.177 -05 000000078 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:02:44.177 -05 000000078 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:02:44.177 -05 000000078 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:02:44.182 -05 000000078 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:02:44.182 -05 000000055 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:02:44.182 -05 000000055 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:02:44.182 -05 000000055 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:02:44.191 -05 000000029 INF: ===================Frame #1250=================== 15-12-21 21:02:44.208 -05 000000055 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:02:44.274 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:44.345 -05 000000029 INF: Camera complete - got 1250 frames. 15-12-21 21:02:44.347 -05 000000029 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:02:44.349 -05 000000056 INF: FPGA: Recv EX1MV 15-12-21 21:02:44.349 -05 000000078 INF: Excitation Filter 1: Moved 36 steps in 171.3148 ms 15-12-21 21:02:44.349 -05 000000078 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 171.4784 ms 15-12-21 21:02:44.349 -05 000000078 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 171.7132 ms 15-12-21 21:02:44.349 -05 000000078 INF: ====================================== 15-12-21 21:02:44.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:44.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:44.399 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:44.463 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:44.600 -05 000000090 INF: FPGA: Recv EX2MV 15-12-21 21:02:44.600 -05 000000055 INF: Excitation Filter 2: Moved 107 steps in 417.5537 ms 15-12-21 21:02:44.600 -05 000000055 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 417.6642 ms 15-12-21 21:02:44.600 -05 000000055 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 422.621 ms 15-12-21 21:02:44.601 -05 000000055 INF: ====================================== 15-12-21 21:02:44.603 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:02:44.610 -05 000000061 INF: ====================================== 15-12-21 21:02:44.690 -05 000000092 INF: ===================Frame #1250=================== 15-12-21 21:02:44.690 -05 000000029 INF: ===================Camera TDI=================== 15-12-21 21:02:44.696 -05 000000092 INF: Camera complete - got 1250 frames. 15-12-21 21:02:44.697 -05 000000092 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:02:44.713 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:44.717 -05 000000029 INF: ====================================== 15-12-21 21:02:44.774 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:44.825 -05 000000092 INF: ===================Camera TDI=================== 15-12-21 21:02:44.850 -05 000000092 INF: ====================================== 15-12-21 21:02:44.852 -05 000000038 INF: ===================Camera TDI=================== 15-12-21 21:02:44.858 -05 000000038 INF: ====================================== 15-12-21 21:02:44.898 -05 000000037 INF: Y Motor: Moved to 9.0765 after 16862 ms 15-12-21 21:02:44.899 -05 000000037 INF: ====================================== 15-12-21 21:02:44.900 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:44.904 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:44.905 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:44.905 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:02:44.963 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:44.975 -05 000000055 INF: FPGA: Recv TDICLINES 9774 15-12-21 21:02:44.975 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:02:45.024 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:45.036 -05 000000090 INF: FPGA: Recv TDIYERD 907648 15-12-21 21:02:45.036 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 21:02:45.038 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 21:02:45.038 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:45.084 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:45.098 -05 000000092 INF: FPGA: Recv ZADCR 38111 15-12-21 21:02:45.098 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.145. Y moved -60.304 mm 15-12-21 21:02:45.098 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:02:45.162 -05 000000089 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:02:45.162 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:02:45.162 -05 000000057 INF: TDIScan finished after 23451.7985 ms 15-12-21 21:02:45.162 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:02:45.162 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:02:45.165 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.193 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.993 um 15-12-21 21:02:45.194 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.199 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.202 -05 000000060 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:02:45.202 -05 000000084 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:02:45.202 -05 000000055 INF: ===================Dither Clean Up Command=================== 15-12-21 21:02:45.202 -05 000000060 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:02:45.202 -05 000000038 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:02:45.203 -05 000000060 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:02:45.203 -05 000000084 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:02:45.208 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:45.222 -05 000000041 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:02:45.222 -05 000000092 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:02:45.223 -05 000000041 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:02:45.224 -05 000000092 INF: ===================LFT:Extracting coords=================== 15-12-21 21:02:45.224 -05 000000089 INF: FPGA: Recv ZSTEP 15-12-21 21:02:45.225 -05 000000060 INF: ====================================== 15-12-21 21:02:45.226 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 58.681C:A1\r\n 15-12-21 21:02:45.226 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:45.272 -05 000000084 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:02:45.277 -05 000000084 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:02:45.277 -05 000000038 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:02:45.284 -05 000000084 INF: ====================================== 15-12-21 21:02:45.287 -05 000000061 INF: FPGA: Recv ZSEL 15-12-21 21:02:45.287 -05 000000041 INF: FPGA: Xmit ZDACW 42334\n 15-12-21 21:02:45.328 -05 000000092 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:02:45.330 -05 000000092 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:02:45.331 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:45.331 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:45.332 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:45.332 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:02:45.332 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:45.332 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:02:45.333 -05 000000038 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:02:45.333 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:02:45.334 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:45.334 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:02:45.334 -05 000000038 INF: ====================================== 15-12-21 21:02:45.356 -05 000000078 INF: FPGA: Recv ZDACW 15-12-21 21:02:45.357 -05 000000041 INF: ====================================== 15-12-21 21:02:45.435 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:45.540 -05 000000056 INF: LFT found best fwhm score 2.563992 in 161 ms 15-12-21 21:02:45.540 -05 000000056 INF: LFT found good score at index 3105 with fwhm value 2.563992. Next cycle, cycle 30 starting Z position for top surface is at -0.170 mm FC:A, C:29,L:1,T 15-12-21 21:02:45.540 -05 000000037 INF: LFT found best fwhm score 2.605645 in 156 ms 15-12-21 21:02:45.540 -05 000000037 INF: LFT found good score at index 1821 with fwhm value 2.605645. Next cycle, cycle 30 starting Z position for top surface is at -0.170 mm FC:A, C:29,L:1,T 15-12-21 21:02:45.544 -05 000000090 INF: LFT found best fwhm score 2.504876 in 169 ms 15-12-21 21:02:45.559 -05 000000090 INF: LFT found good score at index 6137 with fwhm value 2.504876. Next cycle, cycle 30 starting Z position for top surface is at -0.169 mm FC:A, C:29,L:1,T 15-12-21 21:02:45.572 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:45.572 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:45.573 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:45.575 -05 000000045 INF: LFT found best fwhm score 2.721596 in 199 ms 15-12-21 21:02:45.575 -05 000000045 INF: LFT found good score at index 7709 with fwhm value 2.721596. Next cycle, cycle 30 starting Z position for top surface is at -0.169 mm FC:A, C:29,L:1,T 15-12-21 21:02:45.575 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:02:45.581 -05 000000056 INF: ====================================== 15-12-21 21:02:45.590 -05 000000037 INF: ====================================== 15-12-21 21:02:45.590 -05 000000090 INF: ====================================== 15-12-21 21:02:45.590 -05 000000045 INF: ====================================== 15-12-21 21:02:45.625 -05 000000092 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:02:45.626 -05 000000092 INF: LFT weighted average best Z for top surface is at -0.169mm FC:A, C:29,L:1,T 15-12-21 21:02:45.633 -05 000000092 INF: ====================================== 15-12-21 21:02:45.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:45.640 -05 000000055 INF: ====================================== 15-12-21 21:02:45.646 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.649 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:02:45.649 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.649 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:02:45.649 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.649 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:02:45.650 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.650 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:02:45.650 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.650 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:02:45.651 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:02:45.653 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:02:45.653 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:02:45.654 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 21:02:45.654 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 21:02:45.654 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:02:45.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:02:45.655 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:02:45.655 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:02:45.656 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:02:45.663 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:02:45.665 -05 000000082 INF: ===================Registering and Extracting C029 L001 T1101=================== 15-12-21 21:02:45.665 -05 000000034 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102=================== 15-12-21 21:02:45.665 -05 000000020 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103=================== 15-12-21 21:02:45.666 -05 000000044 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104=================== 15-12-21 21:02:45.667 -05 000000072 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105=================== 15-12-21 21:02:45.668 -05 000000031 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106=================== 15-12-21 21:02:45.673 -05 000000088 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107=================== 15-12-21 21:02:45.674 -05 000000027 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107, Registering and Extracting C029 L001 T1108=================== 15-12-21 21:02:45.685 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:45.703 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.703 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:02:45.703 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:45.704 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -161.5 um, section = A_1 15-12-21 21:02:45.707 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:02:45.709 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:02:45.710 -05 000000061 INF: ===================MoveEmissionFilters=================== 15-12-21 21:02:45.711 -05 000000089 INF: ===================Move X,Y=================== 15-12-21 21:02:45.711 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:02:45.712 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:45.712 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:45.712 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:02:45.713 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:02:45.713 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:02:45.713 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:02:45.713 -05 000000089 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:02:45.714 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:02:45.715 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:02:45.715 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:02:45.715 -05 000000090 INF: ===================Move X Motor without settling=================== 15-12-21 21:02:45.715 -05 000000040 INF: ===================Move Y Motor without settling=================== 15-12-21 21:02:45.715 -05 000000090 INF: X Motor: Xmit PR VM\n 15-12-21 21:02:45.715 -05 000000040 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 21:02:45.715 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:02:45.716 -05 000000040 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:02:45.716 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:02:45.716 -05 000000023 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:02:45.716 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:02:45.717 -05 000000078 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:02:45.717 -05 000000038 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:02:45.717 -05 000000084 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:02:45.724 -05 000000078 INF: ====================================== 15-12-21 21:02:45.724 -05 000000045 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:02:45.724 -05 000000045 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:02:45.724 -05 000000055 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:02:45.725 -05 000000045 INF: ====================================== 15-12-21 21:02:45.726 -05 000000084 INF: ====================================== 15-12-21 21:02:45.726 -05 000000060 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:02:45.726 -05 000000038 INF: ====================================== 15-12-21 21:02:45.727 -05 000000060 INF: ====================================== 15-12-21 21:02:45.727 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:02:45.728 -05 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:02:45.728 -05 000000078 INF: ====================================== 15-12-21 21:02:45.728 -05 000000055 INF: ====================================== 15-12-21 21:02:45.728 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:02:45.729 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:02:45.730 -05 000000056 INF: ====================================== 15-12-21 21:02:45.731 -05 000000029 INF: ====================================== 15-12-21 21:02:45.731 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:02:45.732 -05 000000041 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:02:45.732 -05 000000084 INF: ===================TDI Scan Setup=================== 15-12-21 21:02:45.733 -05 000000041 INF: ====================================== 15-12-21 21:02:45.733 -05 000000045 INF: ===================Camera Arm TDI=================== 15-12-21 21:02:45.733 -05 000000092 INF: ====================================== 15-12-21 21:02:45.741 -05 000000084 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:45.743 -05 000000084 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:02:45.743 -05 000000084 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:02:45.743 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:02:45.745 -05 000000037 INF: ====================================== 15-12-21 21:02:45.750 -05 000000084 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:02:45.751 -05 000000040 INF: Y Motor: Xmit 1G\n 15-12-21 21:02:45.753 -05 000000061 INF: ====================================== 15-12-21 21:02:45.757 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:45.769 -05 000000037 INF: FPGA: Recv ZSEL 15-12-21 21:02:45.772 -05 000000084 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:02:45.773 -05 000000084 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:45.777 -05 000000084 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:02:45.777 -05 000000084 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:02:45.777 -05 000000084 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:02:45.849 -05 000000078 INF: FPGA: Recv ZSTEP 15-12-21 21:02:45.850 -05 000000040 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:02:45.851 -05 000000090 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:02:45.851 -05 000000090 INF: X Motor: Xmit PR VI\n 15-12-21 21:02:45.851 -05 000000084 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:45.851 -05 000000040 INF: Y Motor: Recv 1G\r\n 15-12-21 21:02:45.852 -05 000000040 INF: Y Motor: Xmit 1D\n 15-12-21 21:02:45.855 -05 000000084 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:02:45.856 -05 000000084 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:45.860 -05 000000084 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:02:45.860 -05 000000084 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:02:45.860 -05 000000084 INF: Z Motor: Arming to move to -0.1215 mm 15-12-21 21:02:45.860 -05 000000084 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:02:45.870 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:45.925 -05 000000037 INF: FPGA: Recv ZYT 15-12-21 21:02:45.925 -05 000000084 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907645 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:02:45.926 -05 000000084 INF: FPGA: Xmit ZARM 31848\n 15-12-21 21:02:45.926 -05 000000040 INF: Y Motor: Recv 1D\r\n 15-12-21 21:02:45.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:45.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:45.928 -05 000000040 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:02:45.929 -05 000000090 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:02:45.929 -05 000000090 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:02:45.929 -05 000000090 INF: X Motor: Moving to 13.6440 mm @15.000 mm/sec, started at 12.8696 mm 15-12-21 21:02:45.930 -05 000000040 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:02:45.931 -05 000000090 INF: X Motor: Xmit MA -18578\n 15-12-21 21:02:45.990 -05 000000078 INF: FPGA: Recv ZARM 15-12-21 21:02:45.990 -05 000000084 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.6554 ms 15-12-21 21:02:45.990 -05 000000084 INF: Z Motor: ArmAbsStepped took 130.2962 ms 15-12-21 21:02:45.994 -05 000000084 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:02:46.048 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:46.053 -05 000000084 INF: ===================TDI Scan Setup=================== 15-12-21 21:02:46.055 -05 000000090 INF: X Motor: Recv MA -18578\r\n> 15-12-21 21:02:46.062 -05 000000090 INF: X Motor: WaitUntilStopped 60052 15-12-21 21:02:46.064 -05 000000084 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:02:46.072 -05 000000084 INF: ===================TDI Scan Setup=================== 15-12-21 21:02:46.098 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:46.108 -05 000000084 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:02:46.152 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:46.153 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 21:02:46.154 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:46.154 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:46.154 -05 000000084 INF: ===================TDI Scan Setup=================== 15-12-21 21:02:46.157 -05 000000084 INF: ====================================== 15-12-21 21:02:46.252 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:02:46.306 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 21:02:46.306 -05 000000062 INF: Current Position of Pump is: 4608 15-12-21 21:02:46.306 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:02:46.406 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:02:46.586 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:46.656 -05 000000090 INF: X Motor: Xmit PR ER\n 15-12-21 21:02:46.686 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:46.709 -05 000000090 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:02:46.709 -05 000000090 INF: X Motor: Moved to 13.6436 after 647 ms 15-12-21 21:02:46.710 -05 000000090 INF: ====================================== 15-12-21 21:02:46.771 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:46.772 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:46.773 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 21:02:46.773 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:46.832 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:02:46.832 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:47.115 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:02:47.233 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:02:47.233 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:47.529 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:02:47.591 -05 000000045 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:02:47.591 -05 000000045 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:02:47.591 -05 000000045 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:02:47.624 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:02:47.624 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:47.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:47.744 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:47.745 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:47.746 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:47.747 -05 000000062 INF: WaitCommand(5000) start 15-12-21 21:02:47.747 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 21:02:47.796 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:47.796 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:47.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:48.017 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:48.017 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:48.116 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:48.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:48.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:48.321 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:48.345 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.024C:A1\r\n 15-12-21 21:02:48.345 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:48.803 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:48.803 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 21:02:49.407 -05 000000045 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:02:49.407 -05 000000045 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:02:49.408 -05 000000045 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:02:49.410 -05 000000045 INF: ====================================== 15-12-21 21:02:49.411 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:02:49.416 -05 000000023 INF: ====================================== 15-12-21 21:02:49.502 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:49.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:49.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:49.580 -05 000000040 INF: Y Motor: Moved to 70.6885 after 3650 ms 15-12-21 21:02:49.581 -05 000000040 INF: ====================================== 15-12-21 21:02:49.582 -05 000000089 INF: ===================Move X,Y=================== 15-12-21 21:02:49.584 -05 000000089 INF: ====================================== 15-12-21 21:02:49.589 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:02:49.590 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:49.593 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:02:49.633 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:49.639 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:02:49.640 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:02:49.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:49.701 -05 000000078 INF: FPGA: Recv ZFREQCL 15-12-21 21:02:49.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:49.702 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:02:49.702 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:49.703 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:02:49.764 -05 000000084 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:02:49.764 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:02:49.766 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:02:49.769 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:02:49.771 -05 000000061 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:02:49.771 -05 000000061 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:02:49.776 -05 000000023 INF: ===================TDI FPGA Arm=================== 15-12-21 21:02:49.788 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:02:49.821 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:49.823 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:02:49.829 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 21:02:49.829 -05 000000023 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:02:49.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:49.854 -05 000000061 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:02:49.855 -05 000000061 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:02:49.855 -05 000000061 INF: ====================================== 15-12-21 21:02:49.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:49.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:49.925 -05 000000045 INF: FPGA: Recv TDIYPOS 15-12-21 21:02:49.926 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:02:49.929 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:02:49.929 -05 000000023 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:02:50.024 -05 000000060 INF: FPGA: Recv TDIYARM3 15-12-21 21:02:50.025 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:02:50.028 -05 000000023 INF: ===================TDI FPGA Arm=================== 15-12-21 21:02:50.030 -05 000000023 INF: ====================================== 15-12-21 21:02:50.032 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:02:50.034 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:02:50.034 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:50.035 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:50.036 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:50.038 -05 000000078 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:02:50.038 -05 000000041 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:02:50.038 -05 000000078 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:02:50.038 -05 000000078 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:02:50.038 -05 000000078 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:02:50.038 -05 000000078 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:02:50.038 -05 000000041 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:02:50.038 -05 000000041 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:02:50.038 -05 000000041 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:02:50.041 -05 000000041 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:02:50.142 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:50.201 -05 000000084 INF: FPGA: Recv EX1MV 15-12-21 21:02:50.201 -05 000000078 INF: Excitation Filter 1: Moved -36 steps in 162.8181 ms 15-12-21 21:02:50.201 -05 000000078 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 162.9483 ms 15-12-21 21:02:50.201 -05 000000078 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 163.0947 ms 15-12-21 21:02:50.202 -05 000000078 INF: ====================================== 15-12-21 21:02:50.206 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.984C:A1\r\n 15-12-21 21:02:50.206 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:50.355 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:50.388 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.667C:A1\r\n 15-12-21 21:02:50.388 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:50.449 -05 000000090 INF: FPGA: Recv EX2MV 15-12-21 21:02:50.449 -05 000000041 INF: Excitation Filter 2: Moved -107 steps in 410.4405 ms 15-12-21 21:02:50.449 -05 000000041 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 410.5936 ms 15-12-21 21:02:50.449 -05 000000041 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 410.6898 ms 15-12-21 21:02:50.450 -05 000000041 INF: ====================================== 15-12-21 21:02:50.452 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:50.459 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:02:50.464 -05 000000092 INF: ===================FPGA Z Wait=================== 15-12-21 21:02:50.464 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:02:50.467 -05 000000092 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:02:50.468 -05 000000040 INF: ===================Camera TDI=================== 15-12-21 21:02:50.475 -05 000000060 INF: ===================Move Y Motor without settling=================== 15-12-21 21:02:50.475 -05 000000060 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:02:50.475 -05 000000060 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:02:50.475 -05 000000025 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:02:50.476 -05 000000025 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:02:50.479 -05 000000060 INF: Y Motor: Xmit 1G\n 15-12-21 21:02:50.483 -05 000000040 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:02:50.491 -05 000000029 INF: ===================Camera TDI=================== 15-12-21 21:02:50.491 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:02:50.516 -05 000000060 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:02:50.517 -05 000000060 INF: Y Motor: Recv 1G\r\n 15-12-21 21:02:50.518 -05 000000060 INF: Y Motor: Xmit 1D\n 15-12-21 21:02:50.577 -05 000000060 INF: Y Motor: Recv 1D\r\n 15-12-21 21:02:50.578 -05 000000060 INF: Y Motor: Recv *407662\r\n 15-12-21 21:02:50.579 -05 000000060 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:02:50.824 -05 000000023 INF: FPGA: Recv ZWAIT 15-12-21 21:02:50.829 -05 000000092 INF: ====================================== 15-12-21 21:02:50.829 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:50.829 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 21:02:50.947 -05 000000029 INF: ===================Frame #2=================== 15-12-21 21:02:50.950 -05 000000078 INF: ===================Frame #2=================== 15-12-21 21:02:51.111 -05 000000029 INF: ===================Frame #15=================== 15-12-21 21:02:51.115 -05 000000078 INF: ===================Frame #15=================== 15-12-21 21:02:51.256 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:51.266 -05 000000078 INF: ===================Frame #27=================== 15-12-21 21:02:51.266 -05 000000029 INF: ===================Frame #27=================== 15-12-21 21:02:51.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:51.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:51.418 -05 000000078 INF: ===================Frame #39=================== 15-12-21 21:02:51.418 -05 000000029 INF: ===================Frame #39=================== 15-12-21 21:02:51.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:51.574 -05 000000078 INF: ===================Frame #51=================== 15-12-21 21:02:51.599 -05 000000029 INF: ===================Frame #51=================== 15-12-21 21:02:51.637 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:51.637 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:51.726 -05 000000078 INF: ===================Frame #63=================== 15-12-21 21:02:51.745 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:51.749 -05 000000029 INF: ===================Frame #65=================== 15-12-21 21:02:51.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:51.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:51.831 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:51.832 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 21:02:51.861 -05 000000082 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107=================== 15-12-21 21:02:51.871 -05 000000051 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107, Registering and Extracting C029 L001 T1109=================== 15-12-21 21:02:51.876 -05 000000078 INF: ===================Frame #75=================== 15-12-21 21:02:51.899 -05 000000029 INF: ===================Frame #77=================== 15-12-21 21:02:51.981 -05 000000034 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107=================== 15-12-21 21:02:52.027 -05 000000078 INF: ===================Frame #87=================== 15-12-21 21:02:52.050 -05 000000029 INF: ===================Frame #89=================== 15-12-21 21:02:52.078 -05 000000048 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107, Registering and Extracting C029 L001 T1110=================== 15-12-21 21:02:52.179 -05 000000078 INF: ===================Frame #99=================== 15-12-21 21:02:52.201 -05 000000029 INF: ===================Frame #101=================== 15-12-21 21:02:52.330 -05 000000078 INF: ===================Frame #111=================== 15-12-21 21:02:52.351 -05 000000029 INF: ===================Frame #113=================== 15-12-21 21:02:52.480 -05 000000078 INF: ===================Frame #123=================== 15-12-21 21:02:52.501 -05 000000029 INF: ===================Frame #124=================== 15-12-21 21:02:52.632 -05 000000078 INF: ===================Frame #135=================== 15-12-21 21:02:52.750 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:52.750 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:52.750 -05 000000062 INF: WaitCommand(5000) end 15-12-21 21:02:52.752 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:52.754 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:52.756 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:02:52.768 -05 000000056 INF: ===================WaitCommand=================== 15-12-21 21:02:52.768 -05 000000045 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:02:52.771 -05 000000056 INF: WaitCommand(15000) start 15-12-21 21:02:52.772 -05 000000056 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 21:02:52.785 -05 000000078 INF: ===================Frame #147=================== 15-12-21 21:02:52.873 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:52.974 -05 000000078 INF: ===================Frame #162=================== 15-12-21 21:02:52.975 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:52.984 -05 000000044 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107=================== 15-12-21 21:02:52.996 -05 000000029 INF: ===================Frame #164=================== 15-12-21 21:02:53.075 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:53.081 -05 000000009 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107, Registering and Extracting C029 L001 T1111=================== 15-12-21 21:02:53.167 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:53.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:53.202 -05 000000072 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1106, Registering and Extracting C029 L001 T1107=================== 15-12-21 21:02:53.210 -05 000000088 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105=================== 15-12-21 21:02:53.210 -05 000000031 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105=================== 15-12-21 21:02:53.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:53.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:53.274 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:02:53.281 -05 000000028 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112, Registering and Extracting C029 L001 T1113, Registering and Extracting C029 L001 T1114=================== 15-12-21 21:02:53.281 -05 000000068 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112, Registering and Extracting C029 L001 T1113, Registering and Extracting C029 L001 T1114=================== 15-12-21 21:02:53.282 -05 000000063 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112, Registering and Extracting C029 L001 T1113, Registering and Extracting C029 L001 T1114=================== 15-12-21 21:02:53.283 -05 000000020 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112, Registering and Extracting C029 L001 T1113=================== 15-12-21 21:02:53.297 -05 000000027 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112=================== 15-12-21 21:02:53.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:53.353 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 21:02:53.353 -05 000000045 INF: Current Position of Pump is: 4608 15-12-21 21:02:53.353 -05 000000045 INF: Dispense Steps 48000 is greater than steps to home syringe 4608, reducing number of steps to 4608 15-12-21 21:02:53.353 -05 000000045 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:02:53.382 -05 000000079 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112, Registering and Extracting C029 L001 T1115, Registering and Extracting C029 L001 T1116=================== 15-12-21 21:02:53.382 -05 000000054 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112, Registering and Extracting C029 L001 T1115, Registering and Extracting C029 L001 T1116=================== 15-12-21 21:02:53.415 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:53.415 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:53.441 -05 000000029 INF: ===================Frame #199=================== 15-12-21 21:02:53.453 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD4608R\r 15-12-21 21:02:53.526 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:53.539 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:53.592 -05 000000029 INF: ===================Frame #211=================== 15-12-21 21:02:53.605 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.390C:A1\r\n 15-12-21 21:02:53.605 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:53.639 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:53.723 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:53.727 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:53.743 -05 000000029 INF: ===================Frame #223=================== 15-12-21 21:02:53.774 -05 000000056 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 21:02:53.792 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:53.792 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:53.894 -05 000000029 INF: ===================Frame #235=================== 15-12-21 21:02:53.977 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:54.040 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:54.045 -05 000000029 INF: ===================Frame #247=================== 15-12-21 21:02:54.049 -05 000000078 INF: ===================Frame #247=================== 15-12-21 21:02:54.196 -05 000000029 INF: ===================Frame #258=================== 15-12-21 21:02:54.199 -05 000000078 INF: ===================Frame #259=================== 15-12-21 21:02:54.290 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:54.350 -05 000000078 INF: ===================Frame #271=================== 15-12-21 21:02:54.351 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:54.504 -05 000000078 INF: ===================Frame #283=================== 15-12-21 21:02:54.601 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:54.673 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:54.673 -05 000000045 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:02:54.673 -05 000000078 INF: ===================Frame #296=================== 15-12-21 21:02:54.673 -05 000000045 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 21:02:54.803 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:02:54.805 -05 000000056 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 21:02:54.872 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:54.993 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:55.063 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:55.064 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:02:55.094 -05 000000029 INF: ===================Frame #329=================== 15-12-21 21:02:55.117 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:55.117 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:55.248 -05 000000029 INF: ===================Frame #341=================== 15-12-21 21:02:55.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:55.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:55.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:55.314 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:02:55.367 -05 000000045 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:02:55.368 -05 000000045 INF: ====================================== 15-12-21 21:02:55.399 -05 000000029 INF: ===================Frame #354=================== 15-12-21 21:02:55.419 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:02:55.430 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 21:02:55.430 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:55.535 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:55.553 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:55.553 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:55.636 -05 000000078 INF: ===================Frame #372=================== 15-12-21 21:02:55.658 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:02:55.677 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.106C:A1\r\n 15-12-21 21:02:55.677 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:55.689 -05 000000051 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112, Registering and Extracting C029 L001 T1115=================== 15-12-21 21:02:55.806 -05 000000056 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 21:02:55.826 -05 000000029 INF: ===================Frame #387=================== 15-12-21 21:02:55.939 -05 000000078 INF: ===================Frame #396=================== 15-12-21 21:02:55.976 -05 000000029 INF: ===================Frame #399=================== 15-12-21 21:02:56.003 -05 000000048 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105, Registering and Extracting C029 L001 T1112=================== 15-12-21 21:02:56.126 -05 000000029 INF: ===================Frame #411=================== 15-12-21 21:02:56.136 -05 000000078 INF: ===================Frame #412=================== 15-12-21 21:02:56.277 -05 000000029 INF: ===================Frame #423=================== 15-12-21 21:02:56.317 -05 000000078 INF: ===================Frame #426=================== 15-12-21 21:02:56.428 -05 000000029 INF: ===================Frame #435=================== 15-12-21 21:02:56.497 -05 000000078 INF: ===================Frame #440=================== 15-12-21 21:02:56.580 -05 000000029 INF: ===================Frame #447=================== 15-12-21 21:02:56.671 -05 000000078 INF: ===================Frame #454=================== 15-12-21 21:02:56.733 -05 000000029 INF: ===================Frame #459=================== 15-12-21 21:02:56.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:56.801 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:56.801 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:56.806 -05 000000056 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 21:02:56.847 -05 000000078 INF: ===================Frame #468=================== 15-12-21 21:02:56.887 -05 000000029 INF: ===================Frame #471=================== 15-12-21 21:02:56.910 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:56.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:56.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:57.038 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:57.038 -05 000000029 INF: ===================Frame #483=================== 15-12-21 21:02:57.038 -05 000000078 INF: ===================Frame #483=================== 15-12-21 21:02:57.051 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:57.051 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:57.190 -05 000000078 INF: ===================Frame #495=================== 15-12-21 21:02:57.190 -05 000000029 INF: ===================Frame #495=================== 15-12-21 21:02:57.345 -05 000000029 INF: ===================Frame #507=================== 15-12-21 21:02:57.345 -05 000000078 INF: ===================Frame #507=================== 15-12-21 21:02:57.495 -05 000000078 INF: ===================Frame #519=================== 15-12-21 21:02:57.495 -05 000000029 INF: ===================Frame #519=================== 15-12-21 21:02:57.646 -05 000000078 INF: ===================Frame #531=================== 15-12-21 21:02:57.646 -05 000000029 INF: ===================Frame #531=================== 15-12-21 21:02:57.796 -05 000000029 INF: ===================Frame #543=================== 15-12-21 21:02:57.796 -05 000000078 INF: ===================Frame #543=================== 15-12-21 21:02:57.800 -05 000000009 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104, Registering and Extracting C029 L001 T1105=================== 15-12-21 21:02:57.806 -05 000000056 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 21:02:57.840 -05 000000063 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103, Registering and Extracting C029 L001 T1104=================== 15-12-21 21:02:57.905 -05 000000028 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102, Registering and Extracting C029 L001 T1103=================== 15-12-21 21:02:57.917 -05 000000068 INF: ===================Registering and Extracting C029 L001 T1101, Registering and Extracting C029 L001 T1102=================== 15-12-21 21:02:57.929 -05 000000054 INF: ===================Registering and Extracting C029 L001 T1101=================== 15-12-21 21:02:57.947 -05 000000029 INF: ===================Frame #555=================== 15-12-21 21:02:57.947 -05 000000078 INF: ===================Frame #555=================== 15-12-21 21:02:57.969 -05 000000079 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:02:58.024 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:02:58.033 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:02:58.097 -05 000000078 INF: ===================Frame #567=================== 15-12-21 21:02:58.097 -05 000000029 INF: ===================Frame #567=================== 15-12-21 21:02:58.128 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:02:58.134 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:02:58.234 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:02:58.241 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:02:58.248 -05 000000029 INF: ===================Frame #579=================== 15-12-21 21:02:58.248 -05 000000078 INF: ===================Frame #579=================== 15-12-21 21:02:58.274 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:58.298 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:58.298 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:58.336 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:02:58.343 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:02:58.398 -05 000000029 INF: ===================Frame #591=================== 15-12-21 21:02:58.398 -05 000000078 INF: ===================Frame #591=================== 15-12-21 21:02:58.399 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:58.425 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:58.425 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:58.443 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:02:58.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:02:58.549 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:58.549 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:58.549 -05 000000078 INF: ===================Frame #603=================== 15-12-21 21:02:58.550 -05 000000029 INF: ===================Frame #603=================== 15-12-21 21:02:58.700 -05 000000029 INF: ===================Frame #615=================== 15-12-21 21:02:58.701 -05 000000078 INF: ===================Frame #615=================== 15-12-21 21:02:58.723 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:02:58.797 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 16.821C:A1\r\n 15-12-21 21:02:58.797 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:58.806 -05 000000056 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 21:02:58.851 -05 000000078 INF: ===================Frame #627=================== 15-12-21 21:02:58.851 -05 000000029 INF: ===================Frame #627=================== 15-12-21 21:02:59.001 -05 000000029 INF: ===================Frame #638=================== 15-12-21 21:02:59.001 -05 000000078 INF: ===================Frame #638=================== 15-12-21 21:02:59.554 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 21:02:59.643 -05 000000078 INF: ===================Frame #689=================== 15-12-21 21:02:59.780 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:02:59.789 -05 000000029 INF: ===================Frame #701=================== 15-12-21 21:02:59.793 -05 000000078 INF: ===================Frame #701=================== 15-12-21 21:02:59.799 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:02:59.799 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:02:59.806 -05 000000056 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 21:02:59.908 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:02:59.940 -05 000000029 INF: ===================Frame #713=================== 15-12-21 21:02:59.943 -05 000000078 INF: ===================Frame #713=================== 15-12-21 21:02:59.985 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:02:59.985 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:00.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:00.090 -05 000000029 INF: ===================Frame #724=================== 15-12-21 21:03:00.093 -05 000000078 INF: ===================Frame #725=================== 15-12-21 21:03:00.109 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:00.109 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:00.244 -05 000000078 INF: ===================Frame #737=================== 15-12-21 21:03:00.355 -05 000000029 INF: ===================Frame #745=================== 15-12-21 21:03:00.394 -05 000000078 INF: ===================Frame #749=================== 15-12-21 21:03:00.507 -05 000000029 INF: ===================Frame #757=================== 15-12-21 21:03:00.536 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:00.544 -05 000000078 INF: ===================Frame #760=================== 15-12-21 21:03:00.608 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.984C:A1\r\n 15-12-21 21:03:00.608 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:00.657 -05 000000029 INF: ===================Frame #769=================== 15-12-21 21:03:00.778 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:00.794 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.771C:A1\r\n 15-12-21 21:03:00.794 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:00.806 -05 000000056 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 21:03:00.808 -05 000000029 INF: ===================Frame #781=================== 15-12-21 21:03:00.836 -05 000000078 INF: ===================Frame #783=================== 15-12-21 21:03:00.960 -05 000000029 INF: ===================Frame #793=================== 15-12-21 21:03:00.986 -05 000000078 INF: ===================Frame #795=================== 15-12-21 21:03:01.111 -05 000000029 INF: ===================Frame #805=================== 15-12-21 21:03:01.136 -05 000000078 INF: ===================Frame #807=================== 15-12-21 21:03:01.261 -05 000000029 INF: ===================Frame #817=================== 15-12-21 21:03:01.287 -05 000000078 INF: ===================Frame #819=================== 15-12-21 21:03:01.394 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:01.412 -05 000000029 INF: ===================Frame #829=================== 15-12-21 21:03:01.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:01.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:01.438 -05 000000078 INF: ===================Frame #831=================== 15-12-21 21:03:01.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:01.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:01.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:01.565 -05 000000029 INF: ===================Frame #841=================== 15-12-21 21:03:01.588 -05 000000078 INF: ===================Frame #843=================== 15-12-21 21:03:01.652 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:01.672 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:01.672 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:01.717 -05 000000029 INF: ===================Frame #853=================== 15-12-21 21:03:01.738 -05 000000078 INF: ===================Frame #855=================== 15-12-21 21:03:01.807 -05 000000056 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 21:03:01.867 -05 000000029 INF: ===================Frame #865=================== 15-12-21 21:03:01.888 -05 000000078 INF: ===================Frame #867=================== 15-12-21 21:03:02.020 -05 000000029 INF: ===================Frame #877=================== 15-12-21 21:03:02.038 -05 000000078 INF: ===================Frame #878=================== 15-12-21 21:03:02.171 -05 000000029 INF: ===================Frame #889=================== 15-12-21 21:03:02.321 -05 000000029 INF: ===================Frame #901=================== 15-12-21 21:03:02.322 -05 000000078 INF: ===================Frame #901=================== 15-12-21 21:03:02.472 -05 000000029 INF: ===================Frame #913=================== 15-12-21 21:03:02.472 -05 000000078 INF: ===================Frame #913=================== 15-12-21 21:03:02.622 -05 000000078 INF: ===================Frame #925=================== 15-12-21 21:03:02.623 -05 000000029 INF: ===================Frame #925=================== 15-12-21 21:03:02.773 -05 000000078 INF: ===================Frame #937=================== 15-12-21 21:03:02.773 -05 000000029 INF: ===================Frame #937=================== 15-12-21 21:03:02.807 -05 000000056 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 21:03:02.898 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:02.920 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:02.920 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:02.924 -05 000000029 INF: ===================Frame #948=================== 15-12-21 21:03:02.924 -05 000000078 INF: ===================Frame #948=================== 15-12-21 21:03:03.026 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:03.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:03.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:03.209 -05 000000078 INF: ===================Frame #971=================== 15-12-21 21:03:03.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:03.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:03.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:03.359 -05 000000078 INF: ===================Frame #983=================== 15-12-21 21:03:03.402 -05 000000029 INF: ===================Frame #986=================== 15-12-21 21:03:03.510 -05 000000078 INF: ===================Frame #995=================== 15-12-21 21:03:03.603 -05 000000029 INF: ===================Frame #1002=================== 15-12-21 21:03:03.660 -05 000000078 INF: ===================Frame #1007=================== 15-12-21 21:03:03.773 -05 000000029 INF: ===================Frame #1016=================== 15-12-21 21:03:03.807 -05 000000056 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 21:03:03.812 -05 000000078 INF: ===================Frame #1019=================== 15-12-21 21:03:03.900 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:03.916 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.835C:A1\r\n 15-12-21 21:03:03.916 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:03.948 -05 000000029 INF: ===================Frame #1029=================== 15-12-21 21:03:03.963 -05 000000078 INF: ===================Frame #1031=================== 15-12-21 21:03:04.099 -05 000000029 INF: ===================Frame #1041=================== 15-12-21 21:03:04.113 -05 000000078 INF: ===================Frame #1042=================== 15-12-21 21:03:04.251 -05 000000029 INF: ===================Frame #1053=================== 15-12-21 21:03:04.401 -05 000000029 INF: ===================Frame #1065=================== 15-12-21 21:03:04.431 -05 000000078 INF: ===================Frame #1068=================== 15-12-21 21:03:04.518 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:04.539 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:04.539 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:04.552 -05 000000029 INF: ===================Frame #1077=================== 15-12-21 21:03:04.628 -05 000000078 INF: ===================Frame #1083=================== 15-12-21 21:03:04.642 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:04.666 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:04.666 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:04.703 -05 000000029 INF: ===================Frame #1089=================== 15-12-21 21:03:04.766 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:04.778 -05 000000078 INF: ===================Frame #1095=================== 15-12-21 21:03:04.790 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:04.790 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:04.807 -05 000000056 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 21:03:04.854 -05 000000029 INF: ===================Frame #1101=================== 15-12-21 21:03:04.928 -05 000000078 INF: ===================Frame #1107=================== 15-12-21 21:03:05.004 -05 000000029 INF: ===================Frame #1113=================== 15-12-21 21:03:05.080 -05 000000078 INF: ===================Frame #1119=================== 15-12-21 21:03:05.155 -05 000000029 INF: ===================Frame #1125=================== 15-12-21 21:03:05.231 -05 000000078 INF: ===================Frame #1131=================== 15-12-21 21:03:05.305 -05 000000029 INF: ===================Frame #1137=================== 15-12-21 21:03:05.382 -05 000000078 INF: ===================Frame #1143=================== 15-12-21 21:03:05.456 -05 000000029 INF: ===================Frame #1149=================== 15-12-21 21:03:05.532 -05 000000078 INF: ===================Frame #1155=================== 15-12-21 21:03:05.606 -05 000000029 INF: ===================Frame #1161=================== 15-12-21 21:03:05.682 -05 000000078 INF: ===================Frame #1167=================== 15-12-21 21:03:05.712 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:05.757 -05 000000029 INF: ===================Frame #1172=================== 15-12-21 21:03:05.789 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.982C:A1\r\n 15-12-21 21:03:05.789 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:05.808 -05 000000056 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 21:03:05.834 -05 000000078 INF: ===================Frame #1178=================== 15-12-21 21:03:06.017 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:06.037 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.293C:A1\r\n 15-12-21 21:03:06.037 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:06.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:06.161 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:06.161 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:06.177 -05 000000029 INF: ===================Frame #1206=================== 15-12-21 21:03:06.199 -05 000000078 INF: ===================Frame #1207=================== 15-12-21 21:03:06.268 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:06.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:06.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:06.349 -05 000000078 INF: ===================Frame #1219=================== 15-12-21 21:03:06.365 -05 000000029 INF: ===================Frame #1221=================== 15-12-21 21:03:06.396 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:06.413 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:06.413 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:06.499 -05 000000078 INF: ===================Frame #1231=================== 15-12-21 21:03:06.515 -05 000000029 INF: ===================Frame #1232=================== 15-12-21 21:03:06.650 -05 000000078 INF: ===================Frame #1243=================== 15-12-21 21:03:06.705 -05 000000029 INF: ===================Frame #1247=================== 15-12-21 21:03:06.785 -05 000000061 INF: FPGA: Recv TDIYWAIT 15-12-21 21:03:06.786 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:06.788 -05 000000025 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:03:06.790 -05 000000092 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:03:06.790 -05 000000089 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:03:06.790 -05 000000092 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:03:06.790 -05 000000092 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:03:06.790 -05 000000092 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:03:06.790 -05 000000092 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:03:06.790 -05 000000089 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:03:06.790 -05 000000089 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:03:06.790 -05 000000089 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:03:06.794 -05 000000089 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:03:06.800 -05 000000078 INF: ===================Frame #1250=================== 15-12-21 21:03:06.808 -05 000000056 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 21:03:06.855 -05 000000029 INF: ===================Frame #1250=================== 15-12-21 21:03:06.893 -05 000000029 INF: Camera complete - got 1250 frames. 15-12-21 21:03:06.895 -05 000000029 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:03:06.903 -05 000000078 INF: Camera complete - got 1250 frames. 15-12-21 21:03:06.904 -05 000000078 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:03:06.971 -05 000000038 INF: FPGA: Recv EX1MV 15-12-21 21:03:06.971 -05 000000092 INF: Excitation Filter 1: Moved 36 steps in 181.013 ms 15-12-21 21:03:06.971 -05 000000092 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 181.1042 ms 15-12-21 21:03:06.971 -05 000000092 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 181.19 ms 15-12-21 21:03:06.972 -05 000000092 INF: ====================================== 15-12-21 21:03:07.199 -05 000000038 INF: FPGA: Recv EX2MV 15-12-21 21:03:07.228 -05 000000089 INF: Excitation Filter 2: Moved 107 steps in 438.2311 ms 15-12-21 21:03:07.229 -05 000000089 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 438.5115 ms 15-12-21 21:03:07.229 -05 000000089 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 438.6106 ms 15-12-21 21:03:07.230 -05 000000089 INF: ====================================== 15-12-21 21:03:07.232 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:07.236 -05 000000025 INF: ====================================== 15-12-21 21:03:07.716 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:07.719 -05 000000060 INF: Y Motor: Moved to 9.0765 after 17139 ms 15-12-21 21:03:07.720 -05 000000060 INF: ====================================== 15-12-21 21:03:07.773 -05 000000056 INF: ===================WaitCommand=================== 15-12-21 21:03:07.773 -05 000000056 INF: WaitCommand(15000) end 15-12-21 21:03:07.773 -05 000000056 INF: ====================================== 15-12-21 21:03:07.774 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:03:07.777 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:03:07.778 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Deblock=================== 15-12-21 21:03:07.779 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle=================== 15-12-21 21:03:07.780 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:07.781 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:07.782 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:07.782 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:07.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:07.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:07.838 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:07.876 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent CWM (8)=================== 15-12-21 21:03:07.876 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:07.876 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 21:03:07.903 -05 000000029 INF: ===================Camera TDI=================== 15-12-21 21:03:07.926 -05 000000029 INF: ====================================== 15-12-21 21:03:07.939 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:08.003 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:03:08.003 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:08.026 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:03:08.060 -05 000000078 INF: ====================================== 15-12-21 21:03:08.065 -05 000000040 INF: ===================Camera TDI=================== 15-12-21 21:03:08.067 -05 000000040 INF: ====================================== 15-12-21 21:03:08.071 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:08.075 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:08.077 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.077 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:03:08.115 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:08.126 -05 000000090 INF: FPGA: Recv TDICLINES 9816 15-12-21 21:03:08.126 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:03:08.188 -05 000000060 INF: FPGA: Recv TDIYERD 907659 15-12-21 21:03:08.188 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 21:03:08.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:08.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:08.250 -05 000000045 INF: FPGA: Recv ZADCR 37554 15-12-21 21:03:08.250 -05 000000057 INF: At scan end Y pos = 9.077 and Z pos = -0.143. Y moved -60.303 mm 15-12-21 21:03:08.250 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:03:08.292 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:03:08.312 -05 000000023 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:03:08.312 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:03:08.312 -05 000000057 INF: TDIScan finished after 22655.3899 ms 15-12-21 21:03:08.312 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:03:08.312 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:03:08.314 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:03:08.314 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:08.315 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.345 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.111 um 15-12-21 21:03:08.346 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.348 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.351 -05 000000089 INF: ===================Dither Clean Up Command=================== 15-12-21 21:03:08.351 -05 000000045 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:03:08.353 -05 000000045 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:03:08.353 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:03:08.353 -05 000000092 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:03:08.353 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:03:08.354 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:03:08.358 -05 000000029 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:03:08.358 -05 000000090 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:08.364 -05 000000029 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:03:08.364 -05 000000090 INF: ===================LFT:Extracting coords=================== 15-12-21 21:03:08.375 -05 000000045 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:03:08.376 -05 000000045 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:03:08.376 -05 000000092 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:03:08.376 -05 000000045 INF: ====================================== 15-12-21 21:03:08.398 -05 000000090 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:08.401 -05 000000090 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:03:08.406 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:08.406 -05 000000040 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:08.406 -05 000000041 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:08.408 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:08.408 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:08.408 -05 000000040 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:08.409 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:08.410 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:08.434 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:08.439 -05 000000038 INF: FPGA: Recv ZSTEP 15-12-21 21:03:08.439 -05 000000038 INF: FPGA: Recv ZSEL 15-12-21 21:03:08.439 -05 000000029 INF: FPGA: Xmit ZDACW 42334\n 15-12-21 21:03:08.440 -05 000000092 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:03:08.440 -05 000000055 INF: ====================================== 15-12-21 21:03:08.441 -05 000000092 INF: ====================================== 15-12-21 21:03:08.501 -05 000000025 INF: FPGA: Recv ZDACW 15-12-21 21:03:08.502 -05 000000029 INF: ====================================== 15-12-21 21:03:08.503 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:08.503 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:08.585 -05 000000040 INF: LFT found best fwhm score 2.534857 in 128 ms 15-12-21 21:03:08.585 -05 000000040 INF: LFT found good score at index 8601 with fwhm value 2.534857. Next cycle, cycle 30 starting Z position for top surface is at -0.162 mm FC:A, C:29,L:1,T 15-12-21 21:03:08.585 -05 000000040 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:08.586 -05 000000040 INF: ====================================== 15-12-21 21:03:08.596 -05 000000056 INF: LFT found best fwhm score 2.755332 in 140 ms 15-12-21 21:03:08.597 -05 000000056 INF: LFT found good score at index 2373 with fwhm value 2.755332. Next cycle, cycle 30 starting Z position for top surface is at -0.164 mm FC:A, C:29,L:1,T 15-12-21 21:03:08.597 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:08.597 -05 000000056 INF: ====================================== 15-12-21 21:03:08.613 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:08.619 -05 000000037 INF: LFT found best fwhm score 2.589477 in 147 ms 15-12-21 21:03:08.619 -05 000000037 INF: LFT found good score at index 8693 with fwhm value 2.589477. Next cycle, cycle 30 starting Z position for top surface is at -0.162 mm FC:A, C:29,L:1,T 15-12-21 21:03:08.620 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:08.621 -05 000000037 INF: ====================================== 15-12-21 21:03:08.626 -05 000000041 INF: LFT found best fwhm score 2.643262 in 171 ms 15-12-21 21:03:08.626 -05 000000041 INF: LFT found good score at index 2013 with fwhm value 2.643262. Next cycle, cycle 30 starting Z position for top surface is at -0.164 mm FC:A, C:29,L:1,T 15-12-21 21:03:08.628 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:03:08.628 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:08.628 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:08.628 -05 000000041 INF: ====================================== 15-12-21 21:03:08.632 -05 000000090 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:08.633 -05 000000090 INF: LFT weighted average best Z for top surface is at -0.163mm FC:A, C:29,L:1,T 15-12-21 21:03:08.634 -05 000000090 INF: ====================================== 15-12-21 21:03:08.641 -05 000000089 INF: ====================================== 15-12-21 21:03:08.643 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.644 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:03:08.644 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.644 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:03:08.645 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.645 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:03:08.647 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.648 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:03:08.648 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.648 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:03:08.648 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:03:08.650 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:03:08.650 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:03:08.650 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve, Waiting for image analysis=================== 15-12-21 21:03:08.650 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 21:03:08.652 -05 000000057 INF: Waited 2 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 15-12-21 21:03:08.653 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:03:08.653 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:08.653 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:03:08.654 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:03:08.654 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 1=================== 15-12-21 21:03:08.657 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface=================== 15-12-21 21:03:08.658 -05 000000079 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205=================== 15-12-21 21:03:08.658 -05 000000063 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205=================== 15-12-21 21:03:08.658 -05 000000028 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205=================== 15-12-21 21:03:08.658 -05 000000009 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206=================== 15-12-21 21:03:08.658 -05 000000054 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205=================== 15-12-21 21:03:08.658 -05 000000048 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206, Registering and Extracting C029 L001 T1207=================== 15-12-21 21:03:08.668 -05 000000068 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205=================== 15-12-21 21:03:08.670 -05 000000051 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206, Registering and Extracting C029 L001 T1207, Registering and Extracting C029 L001 T1208=================== 15-12-21 21:03:08.705 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:08.705 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:08.706 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:08.715 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:08.717 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:08.717 -05 000000057 INF: Compensator: Remaining IntoPath 15-12-21 21:03:08.717 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:08.858 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:08.867 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:03:08.890 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:03:08.902 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.902 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:03:08.902 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:08.902 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -161.5 um, section = B_1 15-12-21 21:03:08.905 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:08.907 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:08.908 -05 000000045 INF: ===================MoveEmissionFilters=================== 15-12-21 21:03:08.909 -05 000000025 INF: ===================Move X,Y=================== 15-12-21 21:03:08.915 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:08.916 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 21:03:08.916 -05 000000025 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:03:08.916 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:08.916 -05 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:03:08.916 -05 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:03:08.917 -05 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:03:08.917 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:03:08.929 -05 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:03:08.929 -05 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:03:08.929 -05 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:03:08.929 -05 000000060 INF: ===================Move Y Motor without settling=================== 15-12-21 21:03:08.929 -05 000000089 INF: ===================Move X Motor without settling=================== 15-12-21 21:03:08.929 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:03:08.929 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:03:08.930 -05 000000089 INF: X Motor: Xmit PR VM\n 15-12-21 21:03:08.930 -05 000000092 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:03:08.930 -05 000000092 INF: Z Motor: Moving to -0.1629 mm, started at -0.1615 mm 15-12-21 21:03:08.930 -05 000000092 INF: FPGA: Xmit ZTRG 0\n 15-12-21 21:03:08.930 -05 000000060 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 21:03:08.930 -05 000000060 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:03:08.935 -05 000000023 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:03:08.935 -05 000000041 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:03:08.935 -05 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:03:08.935 -05 000000041 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:03:08.935 -05 000000055 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:03:08.935 -05 000000023 INF: ====================================== 15-12-21 21:03:08.936 -05 000000055 INF: ====================================== 15-12-21 21:03:08.936 -05 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:03:08.936 -05 000000041 INF: ====================================== 15-12-21 21:03:08.937 -05 000000029 INF: ====================================== 15-12-21 21:03:08.937 -05 000000040 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:03:08.937 -05 000000078 INF: ====================================== 15-12-21 21:03:08.940 -05 000000060 INF: Y Motor: Xmit 1G\n 15-12-21 21:03:08.940 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:08.941 -05 000000040 INF: ====================================== 15-12-21 21:03:08.941 -05 000000038 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:03:08.945 -05 000000023 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:03:08.945 -05 000000055 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:03:08.945 -05 000000037 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:03:08.948 -05 000000023 INF: ====================================== 15-12-21 21:03:08.949 -05 000000055 INF: ====================================== 15-12-21 21:03:08.949 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:03:08.949 -05 000000038 INF: ====================================== 15-12-21 21:03:08.953 -05 000000037 INF: ====================================== 15-12-21 21:03:08.956 -05 000000090 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:03:08.956 -05 000000056 INF: ====================================== 15-12-21 21:03:08.963 -05 000000090 INF: ====================================== 15-12-21 21:03:08.970 -05 000000041 INF: FPGA: Recv ZTRG 15-12-21 21:03:08.971 -05 000000060 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:03:08.971 -05 000000092 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 21:03:08.975 -05 000000060 INF: Y Motor: Recv 1G\r\n 15-12-21 21:03:08.975 -05 000000045 INF: ====================================== 15-12-21 21:03:08.977 -05 000000060 INF: Y Motor: Xmit 1D\n 15-12-21 21:03:08.982 -05 000000089 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:03:08.982 -05 000000089 INF: X Motor: Xmit PR VI\n 15-12-21 21:03:09.042 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:09.075 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:09.075 -05 000000078 INF: FPGA: Recv ZYT 15-12-21 21:03:09.075 -05 000000092 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 21:03:09.075 -05 000000092 INF: FPGA: Xmit ZMV 42705\n 15-12-21 21:03:09.088 -05 000000060 INF: Y Motor: Recv 1D\r\n 15-12-21 21:03:09.088 -05 000000089 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:03:09.088 -05 000000089 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:03:09.088 -05 000000089 INF: X Motor: Moving to 17.1670 mm @15.000 mm/sec, started at 13.6436 mm 15-12-21 21:03:09.091 -05 000000060 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:03:09.091 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.313C:A1\r\n 15-12-21 21:03:09.091 -05 000000089 INF: X Motor: Xmit MA -17135\n 15-12-21 21:03:09.091 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:09.104 -05 000000060 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:03:09.135 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:03:09.141 -05 000000038 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 21:03:09.141 -05 000000038 INF: FPGA: Recv ZMV 15-12-21 21:03:09.141 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 21:03:09.141 -05 000000092 INF: Z Motor: MoveAndTrigger 'ZMV' command took 65.9182 ms 15-12-21 21:03:09.141 -05 000000092 INF: FPGA: Xmit ZDACR\n 15-12-21 21:03:09.143 -05 000000089 INF: X Motor: Recv MA -17135\r\n> 15-12-21 21:03:09.143 -05 000000089 INF: X Motor: WaitUntilStopped 60235 15-12-21 21:03:09.198 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:03:09.201 -05 000000041 INF: FPGA: Recv ZDACR 42705 15-12-21 21:03:09.201 -05 000000092 INF: Z Motor: MoveAndTrigger took 271.78 ms w/comms 15-12-21 21:03:09.201 -05 000000092 INF: Z Motor: After move to -0.1629, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:03:09.202 -05 000000092 INF: Z Motor: MoveAbsStepped took 271.9162 ms 15-12-21 21:03:09.202 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:09.205 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:03:09.206 -05 000000090 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:09.206 -05 000000040 INF: ===================Camera Arm TDI=================== 15-12-21 21:03:09.208 -05 000000090 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:09.209 -05 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:03:09.210 -05 000000090 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:03:09.210 -05 000000090 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:03:09.289 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 21:03:09.289 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 21:03:09.289 -05 000000029 INF: FPGA: Recv ZSEL 15-12-21 21:03:09.311 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 21:03:09.312 -05 000000090 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:03:09.324 -05 000000090 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:09.333 -05 000000090 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:03:09.334 -05 000000090 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:03:09.334 -05 000000090 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:03:09.392 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P18240R\r 15-12-21 21:03:09.406 -05 000000037 INF: FPGA: Recv ZSTEP 15-12-21 21:03:09.407 -05 000000090 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:09.415 -05 000000090 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:03:09.416 -05 000000090 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:09.421 -05 000000090 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:03:09.422 -05 000000090 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:03:09.422 -05 000000090 INF: Z Motor: Arming to move to -0.1229 mm 15-12-21 21:03:09.422 -05 000000090 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:03:09.468 -05 000000041 INF: FPGA: Recv ZYT 15-12-21 21:03:09.468 -05 000000090 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907647 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:03:09.468 -05 000000090 INF: FPGA: Xmit ZARM 32219\n 15-12-21 21:03:09.469 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:09.530 -05 000000041 INF: FPGA: Recv ZARM 15-12-21 21:03:09.530 -05 000000090 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.0052 ms 15-12-21 21:03:09.530 -05 000000090 INF: Z Motor: ArmAbsStepped took 108.3726 ms 15-12-21 21:03:09.531 -05 000000090 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:09.635 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:09.647 -05 000000090 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:09.650 -05 000000090 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:03:09.685 -05 000000090 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:09.688 -05 000000090 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:03:09.689 -05 000000090 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:09.747 -05 000000090 INF: ====================================== 15-12-21 21:03:09.748 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:09.889 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:09.941 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:09.941 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:09.941 -05 000000089 INF: X Motor: Xmit PR ER\n 15-12-21 21:03:09.998 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:10.001 -05 000000089 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:03:10.001 -05 000000089 INF: X Motor: Moved to 17.1665 after 858 ms 15-12-21 21:03:10.001 -05 000000089 INF: ====================================== 15-12-21 21:03:10.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:10.063 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:10.175 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:10.175 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:10.325 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:10.359 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:10.392 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:10.394 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:10.394 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:10.642 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:10.716 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:10.889 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:10.903 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.984C:A1\r\n 15-12-21 21:03:10.903 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:10.975 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:11.027 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:11.054 -05 000000040 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:03:11.054 -05 000000040 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:03:11.055 -05 000000040 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:03:11.142 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:11.171 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.976C:A1\r\n 15-12-21 21:03:11.171 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:11.277 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:11.358 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:11.648 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:11.699 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:11.860 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:11.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:11.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:11.972 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:12.056 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:12.058 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:12.107 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:12.107 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:12.300 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:12.308 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:12.311 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:12.311 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:12.372 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:12.622 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:12.682 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:12.684 -05 000000040 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:03:12.684 -05 000000040 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:03:12.685 -05 000000040 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:03:12.687 -05 000000040 INF: ====================================== 15-12-21 21:03:12.690 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:12.696 -05 000000092 INF: ====================================== 15-12-21 21:03:12.872 -05 000000060 INF: Y Motor: Moved to 70.6885 after 3767 ms 15-12-21 21:03:12.873 -05 000000060 INF: ====================================== 15-12-21 21:03:12.875 -05 000000025 INF: ===================Move X,Y=================== 15-12-21 21:03:12.882 -05 000000025 INF: ====================================== 15-12-21 21:03:12.893 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:12.906 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:12.906 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:03:12.933 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:12.950 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:03:12.951 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:03:13.009 -05 000000037 INF: FPGA: Recv ZFREQCL 15-12-21 21:03:13.009 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:03:13.010 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:13.010 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:13.010 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:03:13.104 -05 000000092 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:03:13.104 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:03:13.110 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:13.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:13.115 -05 000000037 INF: ===================TDI FPGA Arm=================== 15-12-21 21:03:13.115 -05 000000089 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:03:13.115 -05 000000089 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:03:13.116 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:13.117 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:03:13.117 -05 000000037 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:03:13.164 -05 000000029 INF: FPGA: Recv TDIYPOS 15-12-21 21:03:13.165 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:13.165 -05 000000089 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:03:13.166 -05 000000089 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:03:13.166 -05 000000089 INF: ====================================== 15-12-21 21:03:13.168 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:03:13.168 -05 000000037 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:03:13.229 -05 000000090 INF: FPGA: Recv TDIYARM3 15-12-21 21:03:13.230 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:13.239 -05 000000037 INF: ===================TDI FPGA Arm=================== 15-12-21 21:03:13.244 -05 000000037 INF: ====================================== 15-12-21 21:03:13.247 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:13.248 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:13.248 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:13.253 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:13.254 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:13.259 -05 000000023 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:03:13.259 -05 000000084 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:03:13.260 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:13.260 -05 000000023 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:03:13.260 -05 000000023 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:03:13.260 -05 000000023 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:03:13.260 -05 000000023 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:03:13.260 -05 000000084 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:03:13.260 -05 000000084 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:03:13.260 -05 000000084 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:03:13.287 -05 000000084 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:03:13.290 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:13.415 -05 000000060 INF: FPGA: Recv EX1MV 15-12-21 21:03:13.415 -05 000000023 INF: Excitation Filter 1: Moved -36 steps in 155.2655 ms 15-12-21 21:03:13.415 -05 000000023 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 155.4062 ms 15-12-21 21:03:13.415 -05 000000023 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 155.5536 ms 15-12-21 21:03:13.416 -05 000000023 INF: ====================================== 15-12-21 21:03:13.540 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:13.586 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:13.605 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:13.606 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:13.606 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:13.663 -05 000000023 INF: FPGA: Recv EX2MV 15-12-21 21:03:13.663 -05 000000084 INF: Excitation Filter 2: Moved -107 steps in 403.5267 ms 15-12-21 21:03:13.663 -05 000000084 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 403.6426 ms 15-12-21 21:03:13.663 -05 000000084 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 403.7933 ms 15-12-21 21:03:13.665 -05 000000084 INF: ====================================== 15-12-21 21:03:13.670 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:13.673 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:13.678 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:03:13.678 -05 000000037 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:13.678 -05 000000061 INF: ===================FPGA Z Wait=================== 15-12-21 21:03:13.678 -05 000000061 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:03:13.678 -05 000000056 INF: ===================Move Y Motor without settling=================== 15-12-21 21:03:13.683 -05 000000056 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:03:13.683 -05 000000056 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:03:13.686 -05 000000056 INF: Y Motor: Xmit 1G\n 15-12-21 21:03:13.687 -05 000000078 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:03:13.687 -05 000000037 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:03:13.687 -05 000000037 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:03:13.691 -05 000000060 INF: ===================Camera TDI=================== 15-12-21 21:03:13.691 -05 000000040 INF: ===================Camera TDI=================== 15-12-21 21:03:13.730 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:13.732 -05 000000056 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:03:13.733 -05 000000056 INF: Y Motor: Recv 1G\r\n 15-12-21 21:03:13.734 -05 000000056 INF: Y Motor: Xmit 1D\n 15-12-21 21:03:13.790 -05 000000056 INF: Y Motor: Recv 1D\r\n 15-12-21 21:03:13.791 -05 000000056 INF: Y Motor: Recv *407662\r\n 15-12-21 21:03:13.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:13.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:13.792 -05 000000056 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:03:13.858 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:13.913 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:13.916 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:13.916 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 21:03:13.978 -05 000000029 INF: FPGA: Recv ZWAIT 15-12-21 21:03:13.979 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:13.979 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:13.980 -05 000000061 INF: ====================================== 15-12-21 21:03:14.016 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:03:14.102 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 21:03:14.102 -05 000000062 INF: Current Position of Pump is: 18240 15-12-21 21:03:14.102 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:03:14.220 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:03:14.221 -05 000000040 INF: ===================Frame #3=================== 15-12-21 21:03:14.221 -05 000000060 INF: ===================Frame #3=================== 15-12-21 21:03:14.292 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:14.312 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:14.354 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 21.045C:A1\r\n 15-12-21 21:03:14.355 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:14.381 -05 000000040 INF: ===================Frame #19=================== 15-12-21 21:03:14.381 -05 000000060 INF: ===================Frame #19=================== 15-12-21 21:03:14.394 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:14.477 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:14.532 -05 000000040 INF: ===================Frame #31=================== 15-12-21 21:03:14.532 -05 000000060 INF: ===================Frame #31=================== 15-12-21 21:03:14.683 -05 000000040 INF: ===================Frame #43=================== 15-12-21 21:03:14.683 -05 000000060 INF: ===================Frame #43=================== 15-12-21 21:03:14.731 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:14.789 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:14.789 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:14.790 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 21:03:14.790 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:14.834 -05 000000040 INF: ===================Frame #55=================== 15-12-21 21:03:14.834 -05 000000060 INF: ===================Frame #55=================== 15-12-21 21:03:14.851 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:03:14.851 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:14.957 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:03:14.984 -05 000000040 INF: ===================Frame #67=================== 15-12-21 21:03:14.984 -05 000000060 INF: ===================Frame #67=================== 15-12-21 21:03:15.040 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:03:15.040 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:15.136 -05 000000060 INF: ===================Frame #79=================== 15-12-21 21:03:15.136 -05 000000040 INF: ===================Frame #79=================== 15-12-21 21:03:15.263 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:15.286 -05 000000060 INF: ===================Frame #91=================== 15-12-21 21:03:15.287 -05 000000040 INF: ===================Frame #91=================== 15-12-21 21:03:15.289 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:03:15.289 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:15.396 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:15.397 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:15.397 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:15.398 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:15.413 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:15.413 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:15.438 -05 000000060 INF: ===================Frame #103=================== 15-12-21 21:03:15.438 -05 000000040 INF: ===================Frame #103=================== 15-12-21 21:03:15.634 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:15.634 -05 000000040 INF: ===================Frame #116=================== 15-12-21 21:03:15.634 -05 000000060 INF: ===================Frame #116=================== 15-12-21 21:03:15.714 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:15.714 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:15.821 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:15.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:15.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 519ms 15-12-21 21:03:15.917 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:16.002 -05 000000054 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206, Registering and Extracting C029 L001 T1207=================== 15-12-21 21:03:16.004 -05 000000068 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206=================== 15-12-21 21:03:16.018 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:16.021 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:16.021 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent USB (6)=================== 15-12-21 21:03:16.021 -05 000000062 INF: Valve B2: Go to position 6 15-12-21 21:03:16.021 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:03:16.053 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 8\r 15-12-21 21:03:16.053 -05 000000062 INF: Valve B2: 33.401 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:03:16.053 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 8 to 6 15-12-21 21:03:16.053 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC6\r 15-12-21 21:03:16.054 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 21:03:16.054 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:03:16.060 -05 000000027 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206, Registering and Extracting C029 L001 T1209, Registering and Extracting C029 L001 T1210=================== 15-12-21 21:03:16.060 -05 000000088 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206, Registering and Extracting C029 L001 T1209, Registering and Extracting C029 L001 T1210=================== 15-12-21 21:03:16.088 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 21:03:16.088 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:16.100 -05 000000079 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206, Registering and Extracting C029 L001 T1209=================== 15-12-21 21:03:16.113 -05 000000009 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205, Registering and Extracting C029 L001 T1206=================== 15-12-21 21:03:16.121 -05 000000063 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1205=================== 15-12-21 21:03:16.146 -05 000000040 INF: ===================Frame #159=================== 15-12-21 21:03:16.156 -05 000000060 INF: ===================Frame #160=================== 15-12-21 21:03:16.157 -05 000000051 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204=================== 15-12-21 21:03:16.159 -05 000000031 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211=================== 15-12-21 21:03:16.159 -05 000000072 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212=================== 15-12-21 21:03:16.159 -05 000000044 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212, Registering and Extracting C029 L001 T1213=================== 15-12-21 21:03:16.160 -05 000000020 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212, Registering and Extracting C029 L001 T1213, Registering and Extracting C029 L001 T1214=================== 15-12-21 21:03:16.178 -05 000000028 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212, Registering and Extracting C029 L001 T1213=================== 15-12-21 21:03:16.193 -05 000000048 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212=================== 15-12-21 21:03:16.261 -05 000000082 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212, Registering and Extracting C029 L001 T1215, Registering and Extracting C029 L001 T1216=================== 15-12-21 21:03:16.261 -05 000000034 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212, Registering and Extracting C029 L001 T1215, Registering and Extracting C029 L001 T1216=================== 15-12-21 21:03:16.293 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:16.297 -05 000000040 INF: ===================Frame #171=================== 15-12-21 21:03:16.335 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.505C:A1\r\n 15-12-21 21:03:16.335 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:16.447 -05 000000040 INF: ===================Frame #183=================== 15-12-21 21:03:16.538 -05 000000060 INF: ===================Frame #190=================== 15-12-21 21:03:16.599 -05 000000040 INF: ===================Frame #195=================== 15-12-21 21:03:16.630 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 6\r 15-12-21 21:03:16.630 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:16.631 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 21:03:16.631 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:16.696 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:03:16.696 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:16.750 -05 000000040 INF: ===================Frame #207=================== 15-12-21 21:03:16.814 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:03:16.881 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:03:16.881 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:16.901 -05 000000040 INF: ===================Frame #219=================== 15-12-21 21:03:17.052 -05 000000040 INF: ===================Frame #231=================== 15-12-21 21:03:17.069 -05 000000060 INF: ===================Frame #232=================== 15-12-21 21:03:17.174 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:17.191 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:03:17.191 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:17.202 -05 000000040 INF: ===================Frame #243=================== 15-12-21 21:03:17.314 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:17.314 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:17.315 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 21:03:17.315 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:17.355 -05 000000040 INF: ===================Frame #255=================== 15-12-21 21:03:17.378 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:17.378 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:17.378 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:17.431 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 6, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 140, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:03:17.487 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:03:17.487 -05 000000060 INF: ===================Frame #265=================== 15-12-21 21:03:17.506 -05 000000040 INF: ===================Frame #267=================== 15-12-21 21:03:17.544 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:17.565 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 21:03:17.565 -05 000000062 INF: Current Position of Pump is: 18240 15-12-21 21:03:17.566 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:17.566 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:17.566 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6), Aspirating port PortB=================== 15-12-21 21:03:17.639 -05 000000060 INF: ===================Frame #277=================== 15-12-21 21:03:17.656 -05 000000040 INF: ===================Frame #278=================== 15-12-21 21:03:17.665 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P26880R\r 15-12-21 21:03:17.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:17.714 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:17.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:17.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:17.802 -05 000000060 INF: ===================Frame #290=================== 15-12-21 21:03:17.814 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:17.916 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:18.166 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:18.219 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:18.469 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:18.535 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:18.550 -05 000000060 INF: ===================Frame #349=================== 15-12-21 21:03:18.701 -05 000000060 INF: ===================Frame #361=================== 15-12-21 21:03:18.787 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:18.844 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:18.846 -05 000000040 INF: ===================Frame #373=================== 15-12-21 21:03:18.851 -05 000000060 INF: ===================Frame #373=================== 15-12-21 21:03:18.998 -05 000000040 INF: ===================Frame #384=================== 15-12-21 21:03:19.001 -05 000000060 INF: ===================Frame #385=================== 15-12-21 21:03:19.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:19.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:19.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:19.094 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:19.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:19.152 -05 000000060 INF: ===================Frame #397=================== 15-12-21 21:03:19.157 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:19.158 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:19.158 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:19.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:19.282 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:19.282 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:19.303 -05 000000060 INF: ===================Frame #409=================== 15-12-21 21:03:19.392 -05 000000040 INF: ===================Frame #416=================== 15-12-21 21:03:19.409 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:19.454 -05 000000060 INF: ===================Frame #421=================== 15-12-21 21:03:19.468 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:19.507 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:19.531 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.586C:A1\r\n 15-12-21 21:03:19.531 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:19.605 -05 000000060 INF: ===================Frame #432=================== 15-12-21 21:03:19.620 -05 000000040 INF: ===================Frame #434=================== 15-12-21 21:03:19.718 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:19.781 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:19.844 -05 000000040 INF: ===================Frame #451=================== 15-12-21 21:03:19.995 -05 000000040 INF: ===================Frame #463=================== 15-12-21 21:03:20.031 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:20.091 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:20.147 -05 000000040 INF: ===================Frame #475=================== 15-12-21 21:03:20.159 -05 000000060 INF: ===================Frame #476=================== 15-12-21 21:03:20.299 -05 000000040 INF: ===================Frame #487=================== 15-12-21 21:03:20.341 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:20.404 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:20.457 -05 000000040 INF: ===================Frame #500=================== 15-12-21 21:03:20.461 -05 000000060 INF: ===================Frame #500=================== 15-12-21 21:03:20.535 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:20.597 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:20.597 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:20.654 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:20.715 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:20.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:20.764 -05 000000060 INF: ===================Frame #524=================== 15-12-21 21:03:20.780 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:20.780 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:20.882 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:20.903 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:20.903 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:20.965 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:20.965 -05 000000040 INF: ===================Frame #540=================== 15-12-21 21:03:21.015 -05 000000060 INF: ===================Frame #544=================== 15-12-21 21:03:21.029 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:21.079 -05 000000031 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212, Registering and Extracting C029 L001 T1215=================== 15-12-21 21:03:21.112 -05 000000027 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211, Registering and Extracting C029 L001 T1212=================== 15-12-21 21:03:21.201 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:21.206 -05 000000060 INF: ===================Frame #559=================== 15-12-21 21:03:21.206 -05 000000040 INF: ===================Frame #559=================== 15-12-21 21:03:21.216 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.982C:A1\r\n 15-12-21 21:03:21.216 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:21.280 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:21.341 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:21.356 -05 000000060 INF: ===================Frame #571=================== 15-12-21 21:03:21.356 -05 000000040 INF: ===================Frame #571=================== 15-12-21 21:03:21.506 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:21.507 -05 000000040 INF: ===================Frame #583=================== 15-12-21 21:03:21.507 -05 000000060 INF: ===================Frame #583=================== 15-12-21 21:03:21.528 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.739C:A1\r\n 15-12-21 21:03:21.528 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:21.595 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:21.653 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:21.657 -05 000000060 INF: ===================Frame #595=================== 15-12-21 21:03:21.657 -05 000000040 INF: ===================Frame #595=================== 15-12-21 21:03:21.807 -05 000000060 INF: ===================Frame #607=================== 15-12-21 21:03:21.807 -05 000000040 INF: ===================Frame #607=================== 15-12-21 21:03:21.903 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:21.943 -05 000000020 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203, Registering and Extracting C029 L001 T1204, Registering and Extracting C029 L001 T1211=================== 15-12-21 21:03:21.957 -05 000000060 INF: ===================Frame #618=================== 15-12-21 21:03:21.958 -05 000000040 INF: ===================Frame #619=================== 15-12-21 21:03:21.970 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:22.044 -05 000000088 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203=================== 15-12-21 21:03:22.044 -05 000000072 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202, Registering and Extracting C029 L001 T1203=================== 15-12-21 21:03:22.065 -05 000000044 INF: ===================Registering and Extracting C029 L001 T1201, Registering and Extracting C029 L001 T1202=================== 15-12-21 21:03:22.081 -05 000000034 INF: ===================Registering and Extracting C029 L001 T1201=================== 15-12-21 21:03:22.082 -05 000000082 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:03:22.110 -05 000000040 INF: ===================Frame #630=================== 15-12-21 21:03:22.162 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:22.173 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:03:22.200 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:22.217 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:22.217 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:22.220 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:22.238 -05 000000060 INF: ===================Frame #641=================== 15-12-21 21:03:22.316 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:22.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:22.329 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:03:22.340 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:22.342 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:22.342 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:22.388 -05 000000060 INF: ===================Frame #653=================== 15-12-21 21:03:22.388 -05 000000040 INF: ===================Frame #653=================== 15-12-21 21:03:22.433 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:22.443 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:03:22.453 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:22.466 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:22.466 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:22.539 -05 000000040 INF: ===================Frame #664=================== 15-12-21 21:03:22.539 -05 000000060 INF: ===================Frame #664=================== 15-12-21 21:03:22.561 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:22.575 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:03:22.592 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:22.651 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:22.688 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:22.762 -05 000000040 INF: ===================Frame #682=================== 15-12-21 21:03:22.778 -05 000000060 INF: ===================Frame #683=================== 15-12-21 21:03:22.901 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:22.929 -05 000000060 INF: ===================Frame #695=================== 15-12-21 21:03:22.960 -05 000000040 INF: ===================Frame #698=================== 15-12-21 21:03:22.964 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:23.081 -05 000000060 INF: ===================Frame #707=================== 15-12-21 21:03:23.143 -05 000000040 INF: ===================Frame #712=================== 15-12-21 21:03:23.214 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:23.231 -05 000000060 INF: ===================Frame #719=================== 15-12-21 21:03:23.275 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:23.321 -05 000000040 INF: ===================Frame #726=================== 15-12-21 21:03:23.381 -05 000000060 INF: ===================Frame #731=================== 15-12-21 21:03:23.496 -05 000000040 INF: ===================Frame #740=================== 15-12-21 21:03:23.525 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:23.531 -05 000000060 INF: ===================Frame #743=================== 15-12-21 21:03:23.573 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 21:03:23.589 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:23.672 -05 000000040 INF: ===================Frame #754=================== 15-12-21 21:03:23.681 -05 000000060 INF: ===================Frame #755=================== 15-12-21 21:03:23.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:23.713 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:23.713 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:23.818 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:23.831 -05 000000060 INF: ===================Frame #767=================== 15-12-21 21:03:23.839 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:23.839 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:23.839 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:23.842 -05 000000040 INF: ===================Frame #767=================== 15-12-21 21:03:23.900 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:23.900 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 21:03:23.946 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:23.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:23.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:23.982 -05 000000060 INF: ===================Frame #779=================== 15-12-21 21:03:23.992 -05 000000040 INF: ===================Frame #779=================== 15-12-21 21:03:24.000 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:03:24.088 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 21:03:24.088 -05 000000062 INF: Current Position of Pump is: 45120 15-12-21 21:03:24.088 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:03:24.132 -05 000000060 INF: ===================Frame #790=================== 15-12-21 21:03:24.142 -05 000000040 INF: ===================Frame #791=================== 15-12-21 21:03:24.188 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:03:24.276 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:24.293 -05 000000040 INF: ===================Frame #803=================== 15-12-21 21:03:24.376 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:24.443 -05 000000040 INF: ===================Frame #815=================== 15-12-21 21:03:24.445 -05 000000060 INF: ===================Frame #815=================== 15-12-21 21:03:24.460 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:24.594 -05 000000040 INF: ===================Frame #827=================== 15-12-21 21:03:24.595 -05 000000060 INF: ===================Frame #827=================== 15-12-21 21:03:24.642 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:24.710 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:24.715 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.143C:A1\r\n 15-12-21 21:03:24.715 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:24.745 -05 000000060 INF: ===================Frame #839=================== 15-12-21 21:03:24.746 -05 000000040 INF: ===================Frame #839=================== 15-12-21 21:03:24.773 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:24.773 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:24.774 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 21:03:24.816 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:24.836 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:03:24.836 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:24.896 -05 000000060 INF: ===================Frame #851=================== 15-12-21 21:03:24.897 -05 000000040 INF: ===================Frame #851=================== 15-12-21 21:03:24.942 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:03:24.960 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:03:24.960 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:25.047 -05 000000060 INF: ===================Frame #863=================== 15-12-21 21:03:25.047 -05 000000040 INF: ===================Frame #863=================== 15-12-21 21:03:25.064 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:25.199 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:25.199 -05 000000060 INF: ===================Frame #875=================== 15-12-21 21:03:25.199 -05 000000040 INF: ===================Frame #875=================== 15-12-21 21:03:25.199 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:25.201 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 21:03:25.202 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle=================== 15-12-21 21:03:25.205 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:25.206 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:25.209 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:25.354 -05 000000040 INF: ===================Frame #887=================== 15-12-21 21:03:25.354 -05 000000060 INF: ===================Frame #887=================== 15-12-21 21:03:25.433 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:25.515 -05 000000060 INF: ===================Frame #899=================== 15-12-21 21:03:25.530 -05 000000040 INF: ===================Frame #899=================== 15-12-21 21:03:25.532 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:25.532 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:25.774 -05 000000060 INF: ===================Frame #916=================== 15-12-21 21:03:25.774 -05 000000040 INF: ===================Frame #916=================== 15-12-21 21:03:25.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:25.898 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:25.898 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 691ms 15-12-21 21:03:25.901 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:26.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:26.007 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:26.007 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Selecting Reagent IMT (1)=================== 15-12-21 21:03:26.008 -05 000000062 INF: Valve B2: Go to position 1 15-12-21 21:03:26.008 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:03:26.023 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:26.023 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:26.083 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 6\r 15-12-21 21:03:26.083 -05 000000062 INF: Valve B2: 10.029 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:03:26.083 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 6 to 1 15-12-21 21:03:26.083 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC1\r 15-12-21 21:03:26.085 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 21:03:26.085 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:03:26.308 -05 000000060 INF: ===================Frame #962=================== 15-12-21 21:03:26.323 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:26.335 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 21:03:26.335 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:26.344 -05 000000040 INF: ===================Frame #965=================== 15-12-21 21:03:26.495 -05 000000040 INF: ===================Frame #977=================== 15-12-21 21:03:26.528 -05 000000060 INF: ===================Frame #980=================== 15-12-21 21:03:26.637 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:26.645 -05 000000040 INF: ===================Frame #989=================== 15-12-21 21:03:26.705 -05 000000060 INF: ===================Frame #994=================== 15-12-21 21:03:26.707 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.724C:A1\r\n 15-12-21 21:03:26.707 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:26.796 -05 000000040 INF: ===================Frame #1001=================== 15-12-21 21:03:26.876 -05 000000060 INF: ===================Frame #1007=================== 15-12-21 21:03:26.946 -05 000000040 INF: ===================Frame #1013=================== 15-12-21 21:03:27.026 -05 000000060 INF: ===================Frame #1019=================== 15-12-21 21:03:27.097 -05 000000040 INF: ===================Frame #1025=================== 15-12-21 21:03:27.143 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 1\r 15-12-21 21:03:27.143 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:27.143 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 21:03:27.177 -05 000000060 INF: ===================Frame #1031=================== 15-12-21 21:03:27.247 -05 000000040 INF: ===================Frame #1037=================== 15-12-21 21:03:27.311 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:27.328 -05 000000060 INF: ===================Frame #1043=================== 15-12-21 21:03:27.331 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:03:27.331 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:27.397 -05 000000040 INF: ===================Frame #1049=================== 15-12-21 21:03:27.431 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:27.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:27.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:27.478 -05 000000060 INF: ===================Frame #1055=================== 15-12-21 21:03:27.548 -05 000000040 INF: ===================Frame #1060=================== 15-12-21 21:03:27.558 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:03:27.581 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:03:27.581 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:27.628 -05 000000060 INF: ===================Frame #1067=================== 15-12-21 21:03:27.682 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:27.708 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:27.708 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:27.780 -05 000000060 INF: ===================Frame #1079=================== 15-12-21 21:03:27.807 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:27.830 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:03:27.830 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:27.881 -05 000000040 INF: ===================Frame #1087=================== 15-12-21 21:03:27.930 -05 000000060 INF: ===================Frame #1091=================== 15-12-21 21:03:27.931 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:27.931 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:27.931 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 21:03:27.931 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:27.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:27.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:28.002 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:28.011 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 1, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:03:28.032 -05 000000040 INF: ===================Frame #1099=================== 15-12-21 21:03:28.081 -05 000000060 INF: ===================Frame #1103=================== 15-12-21 21:03:28.102 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:03:28.182 -05 000000040 INF: ===================Frame #1111=================== 15-12-21 21:03:28.190 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 21:03:28.190 -05 000000062 INF: Current Position of Pump is: 45120 15-12-21 21:03:28.190 -05 000000062 INF: Dispensing because using MultiAspirate and syringe is full 15-12-21 21:03:28.231 -05 000000060 INF: ===================Frame #1114=================== 15-12-21 21:03:28.290 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r 15-12-21 21:03:28.333 -05 000000040 INF: ===================Frame #1123=================== 15-12-21 21:03:28.377 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:28.477 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:28.485 -05 000000040 INF: ===================Frame #1135=================== 15-12-21 21:03:28.528 -05 000000060 INF: ===================Frame #1138=================== 15-12-21 21:03:28.566 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:28.635 -05 000000040 INF: ===================Frame #1146=================== 15-12-21 21:03:28.702 -05 000000060 INF: ===================Frame #1152=================== 15-12-21 21:03:28.816 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:28.875 -05 000000060 INF: ===================Frame #1165=================== 15-12-21 21:03:28.876 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:28.882 -05 000000040 INF: ===================Frame #1166=================== 15-12-21 21:03:28.976 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r 15-12-21 21:03:29.026 -05 000000060 INF: ===================Frame #1177=================== 15-12-21 21:03:29.053 -05 000000040 INF: ===================Frame #1179=================== 15-12-21 21:03:29.062 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:29.162 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:29.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:29.178 -05 000000060 INF: ===================Frame #1189=================== 15-12-21 21:03:29.204 -05 000000040 INF: ===================Frame #1191=================== 15-12-21 21:03:29.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:29.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:29.250 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:29.310 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:29.328 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:29.328 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:29.329 -05 000000060 INF: ===================Frame #1201=================== 15-12-21 21:03:29.354 -05 000000040 INF: ===================Frame #1203=================== 15-12-21 21:03:29.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:29.454 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:29.454 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:29.479 -05 000000060 INF: ===================Frame #1213=================== 15-12-21 21:03:29.500 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:29.505 -05 000000040 INF: ===================Frame #1215=================== 15-12-21 21:03:29.564 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:29.630 -05 000000060 INF: ===================Frame #1225=================== 15-12-21 21:03:29.655 -05 000000040 INF: ===================Frame #1227=================== 15-12-21 21:03:29.781 -05 000000060 INF: ===================Frame #1237=================== 15-12-21 21:03:29.805 -05 000000040 INF: ===================Frame #1239=================== 15-12-21 21:03:29.816 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:29.816 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:29.875 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:29.895 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.845C:A1\r\n 15-12-21 21:03:29.895 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:29.932 -05 000000060 INF: ===================Frame #1249=================== 15-12-21 21:03:29.955 -05 000000040 INF: ===================Frame #1250=================== 15-12-21 21:03:29.998 -05 000000084 INF: FPGA: Recv TDIYWAIT 15-12-21 21:03:29.999 -05 000000037 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:30.003 -05 000000037 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:03:30.005 -05 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:03:30.005 -05 000000025 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:03:30.005 -05 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:03:30.005 -05 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:03:30.005 -05 000000090 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:03:30.005 -05 000000090 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:03:30.005 -05 000000025 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:03:30.006 -05 000000025 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:03:30.006 -05 000000025 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:03:30.011 -05 000000025 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:03:30.062 -05 000000040 INF: Camera complete - got 1250 frames. 15-12-21 21:03:30.064 -05 000000040 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:03:30.125 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:30.180 -05 000000060 INF: ===================Frame #1250=================== 15-12-21 21:03:30.180 -05 000000040 INF: ===================Camera TDI=================== 15-12-21 21:03:30.186 -05 000000055 INF: FPGA: Recv EX1MV 15-12-21 21:03:30.186 -05 000000025 INF: Excitation Filter 1: Moved 36 steps in 180.3505 ms 15-12-21 21:03:30.186 -05 000000025 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 180.481 ms 15-12-21 21:03:30.186 -05 000000025 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 180.6531 ms 15-12-21 21:03:30.187 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:30.187 -05 000000025 INF: ====================================== 15-12-21 21:03:30.210 -05 000000040 INF: ====================================== 15-12-21 21:03:30.299 -05 000000060 INF: Camera complete - got 1250 frames. 15-12-21 21:03:30.301 -05 000000060 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:03:30.371 -05 000000041 INF: FPGA: Recv EX2MV 15-12-21 21:03:30.371 -05 000000090 INF: Excitation Filter 2: Moved 107 steps in 365.6284 ms 15-12-21 21:03:30.371 -05 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 365.7397 ms 15-12-21 21:03:30.371 -05 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 365.828 ms 15-12-21 21:03:30.372 -05 000000090 INF: ====================================== 15-12-21 21:03:30.373 -05 000000037 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:30.380 -05 000000037 INF: ====================================== 15-12-21 21:03:30.437 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:30.441 -05 000000060 INF: ===================Camera TDI=================== 15-12-21 21:03:30.472 -05 000000060 INF: ====================================== 15-12-21 21:03:30.474 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:03:30.476 -05 000000078 INF: ====================================== 15-12-21 21:03:30.545 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:30.733 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:30.738 -05 000000056 INF: Y Motor: Moved to 9.0764 after 16946 ms 15-12-21 21:03:30.739 -05 000000056 INF: ====================================== 15-12-21 21:03:30.741 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:30.743 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:30.745 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:30.745 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:03:30.794 -05 000000023 INF: FPGA: Recv TDICLINES 9528 15-12-21 21:03:30.794 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:03:30.795 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:30.796 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:30.796 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:30.883 -05 000000041 INF: FPGA: Recv TDIYERD 907642 15-12-21 21:03:30.884 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 21:03:30.886 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:30.943 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:30.946 -05 000000023 INF: FPGA: Recv ZADCR 37574 15-12-21 21:03:30.946 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.143. Y moved -60.304 mm 15-12-21 21:03:30.946 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:03:30.995 -05 000000025 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:03:30.995 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:03:30.995 -05 000000057 INF: TDIScan finished after 22103.942 ms 15-12-21 21:03:30.995 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:03:30.995 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:03:30.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:30.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:30.998 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.030 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.963 um 15-12-21 21:03:31.031 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.034 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.038 -05 000000023 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:03:31.038 -05 000000056 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:03:31.038 -05 000000023 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:03:31.038 -05 000000056 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:03:31.043 -05 000000090 INF: ===================Dither Clean Up Command=================== 15-12-21 21:03:31.043 -05 000000086 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:03:31.043 -05 000000056 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:03:31.051 -05 000000078 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:03:31.051 -05 000000084 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:31.053 -05 000000078 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:03:31.057 -05 000000084 INF: ===================LFT:Extracting coords=================== 15-12-21 21:03:31.064 -05 000000037 INF: FPGA: Recv ZSTEP 15-12-21 21:03:31.065 -05 000000023 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:03:31.065 -05 000000056 INF: ====================================== 15-12-21 21:03:31.066 -05 000000023 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:03:31.066 -05 000000023 INF: ====================================== 15-12-21 21:03:31.066 -05 000000086 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:03:31.097 -05 000000084 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:31.098 -05 000000084 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:03:31.099 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:31.099 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:31.108 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:31.110 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:31.110 -05 000000040 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:31.110 -05 000000025 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:31.111 -05 000000040 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:31.111 -05 000000025 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:31.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:31.133 -05 000000029 INF: FPGA: Recv ZSEL 15-12-21 21:03:31.133 -05 000000078 INF: FPGA: Xmit ZDACW 42705\n 15-12-21 21:03:31.136 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:31.136 -05 000000086 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:03:31.137 -05 000000086 INF: ====================================== 15-12-21 21:03:31.184 -05 000000023 INF: FPGA: Recv ZDACW 15-12-21 21:03:31.185 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:31.185 -05 000000078 INF: ====================================== 15-12-21 21:03:31.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:31.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:31.281 -05 000000025 INF: LFT found best fwhm score 3.067726 in 126 ms 15-12-21 21:03:31.282 -05 000000025 INF: LFT found good score at index 7589 with fwhm value 3.067726. Next cycle, cycle 30 starting Z position for top surface is at -0.164 mm FC:A, C:29,L:2,T 15-12-21 21:03:31.282 -05 000000025 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:31.282 -05 000000025 INF: ====================================== 15-12-21 21:03:31.283 -05 000000037 INF: LFT found best fwhm score 2.841935 in 129 ms 15-12-21 21:03:31.283 -05 000000037 INF: LFT found good score at index 2377 with fwhm value 2.841935. Next cycle, cycle 30 starting Z position for top surface is at -0.165 mm FC:A, C:29,L:2,T 15-12-21 21:03:31.283 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:31.283 -05 000000037 INF: ====================================== 15-12-21 21:03:31.348 -05 000000055 INF: LFT found best fwhm score 2.91238 in 196 ms 15-12-21 21:03:31.348 -05 000000055 INF: LFT found good score at index 6345 with fwhm value 2.91238. Next cycle, cycle 30 starting Z position for top surface is at -0.164 mm FC:A, C:29,L:2,T 15-12-21 21:03:31.349 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:31.349 -05 000000055 INF: ====================================== 15-12-21 21:03:31.350 -05 000000040 INF: LFT found best fwhm score 2.887271 in 196 ms 15-12-21 21:03:31.350 -05 000000040 INF: LFT found good score at index 1269 with fwhm value 2.887271. Next cycle, cycle 30 starting Z position for top surface is at -0.166 mm FC:A, C:29,L:2,T 15-12-21 21:03:31.351 -05 000000040 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:31.351 -05 000000040 INF: ====================================== 15-12-21 21:03:31.352 -05 000000084 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:31.356 -05 000000084 INF: LFT weighted average best Z for top surface is at -0.165mm FC:A, C:29,L:2,T 15-12-21 21:03:31.356 -05 000000084 INF: ====================================== 15-12-21 21:03:31.358 -05 000000090 INF: ====================================== 15-12-21 21:03:31.361 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.363 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:03:31.363 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.363 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:03:31.364 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.364 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:03:31.364 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.364 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:03:31.364 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.364 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:03:31.365 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:03:31.365 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:03:31.366 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:03:31.366 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Waiting for image analysis=================== 15-12-21 21:03:31.366 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 21:03:31.366 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:03:31.366 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:31.366 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:03:31.367 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:03:31.367 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:31.368 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:03:31.374 -05 000000044 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106=================== 15-12-21 21:03:31.374 -05 000000072 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106=================== 15-12-21 21:03:31.374 -05 000000031 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106=================== 15-12-21 21:03:31.374 -05 000000082 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106=================== 15-12-21 21:03:31.374 -05 000000088 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106, Registering and Extracting C029 L002 T1107, Registering and Extracting C029 L002 T1108=================== 15-12-21 21:03:31.374 -05 000000027 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106, Registering and Extracting C029 L002 T1107, Registering and Extracting C029 L002 T1108=================== 15-12-21 21:03:31.374 -05 000000020 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106=================== 15-12-21 21:03:31.376 -05 000000034 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106=================== 15-12-21 21:03:31.382 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.382 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:03:31.383 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:31.383 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -162.9 um, section = B_1 15-12-21 21:03:31.391 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:31.393 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:31.404 -05 000000084 INF: ===================MoveEmissionFilters=================== 15-12-21 21:03:31.404 -05 000000089 INF: ===================Move X,Y=================== 15-12-21 21:03:31.404 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:31.409 -05 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:03:31.409 -05 000000089 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:03:31.409 -05 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:03:31.409 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:03:31.409 -05 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:03:31.409 -05 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:03:31.414 -05 000000056 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:03:31.423 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:31.430 -05 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:03:31.430 -05 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:03:31.431 -05 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:03:31.435 -05 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:03:31.435 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:31.444 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:31.474 -05 000000086 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:03:31.474 -05 000000025 INF: ===================Move Y Motor without settling=================== 15-12-21 21:03:31.475 -05 000000041 INF: ===================Move X Motor without settling=================== 15-12-21 21:03:31.475 -05 000000092 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:03:31.475 -05 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:03:31.475 -05 000000086 INF: ====================================== 15-12-21 21:03:31.476 -05 000000041 INF: X Motor: Xmit PR VM\n 15-12-21 21:03:31.476 -05 000000025 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 21:03:31.476 -05 000000092 INF: ====================================== 15-12-21 21:03:31.476 -05 000000025 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:03:31.476 -05 000000055 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:03:31.476 -05 000000023 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:03:31.477 -05 000000037 INF: ====================================== 15-12-21 21:03:31.477 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:03:31.482 -05 000000023 INF: ====================================== 15-12-21 21:03:31.482 -05 000000055 INF: ====================================== 15-12-21 21:03:31.482 -05 000000029 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:03:31.487 -05 000000025 INF: Y Motor: Xmit 1G\n 15-12-21 21:03:31.496 -05 000000029 INF: ====================================== 15-12-21 21:03:31.504 -05 000000090 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:03:31.510 -05 000000092 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:03:31.521 -05 000000086 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:31.522 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:31.522 -05 000000040 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:03:31.543 -05 000000092 INF: ====================================== 15-12-21 21:03:31.545 -05 000000025 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:03:31.547 -05 000000055 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:03:31.548 -05 000000025 INF: Y Motor: Recv 1G\r\n 15-12-21 21:03:31.549 -05 000000055 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:03:31.556 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 21:03:31.556 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:31.557 -05 000000041 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:03:31.557 -05 000000041 INF: X Motor: Xmit PR VI\n 15-12-21 21:03:31.557 -05 000000060 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:03:31.558 -05 000000055 INF: ====================================== 15-12-21 21:03:31.558 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:31.560 -05 000000025 INF: Y Motor: Xmit 1D\n 15-12-21 21:03:31.560 -05 000000040 INF: ====================================== 15-12-21 21:03:31.560 -05 000000023 INF: ===================Camera Arm TDI=================== 15-12-21 21:03:31.561 -05 000000090 INF: ====================================== 15-12-21 21:03:31.586 -05 000000078 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:03:31.587 -05 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:03:31.589 -05 000000060 INF: ====================================== 15-12-21 21:03:31.589 -05 000000086 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:03:31.589 -05 000000078 INF: ====================================== 15-12-21 21:03:31.590 -05 000000086 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:03:31.592 -05 000000084 INF: ====================================== 15-12-21 21:03:31.614 -05 000000060 INF: FPGA: Recv ZSEL 15-12-21 21:03:31.615 -05 000000025 INF: Y Motor: Recv 1D\r\n 15-12-21 21:03:31.649 -05 000000041 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:03:31.649 -05 000000041 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:03:31.649 -05 000000086 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:03:31.650 -05 000000025 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:03:31.650 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:31.651 -05 000000041 INF: X Motor: Moving to 17.9390 mm @15.000 mm/sec, started at 17.1665 mm 15-12-21 21:03:31.651 -05 000000041 INF: X Motor: Xmit MA -16819\n 15-12-21 21:03:31.653 -05 000000025 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:03:31.654 -05 000000086 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:03:31.654 -05 000000086 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:03:31.656 -05 000000086 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:03:31.686 -05 000000090 INF: FPGA: Recv ZSTEP 15-12-21 21:03:31.687 -05 000000041 INF: X Motor: Recv MA -16819\r\n> 15-12-21 21:03:31.687 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:31.687 -05 000000041 INF: X Motor: WaitUntilStopped 60051 15-12-21 21:03:31.752 -05 000000086 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:03:31.753 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:31.757 -05 000000086 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:03:31.757 -05 000000086 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:03:31.757 -05 000000086 INF: Z Motor: Arming to move to -0.1229 mm 15-12-21 21:03:31.757 -05 000000086 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:03:31.792 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:31.807 -05 000000084 INF: FPGA: Recv ZYT 15-12-21 21:03:31.807 -05 000000086 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907641 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:03:31.807 -05 000000086 INF: FPGA: Xmit ZARM 32219\n 15-12-21 21:03:31.822 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:31.855 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:31.874 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.231C:A1\r\n 15-12-21 21:03:31.970 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:31.970 -05 000000084 INF: FPGA: Recv ZARM 15-12-21 21:03:31.970 -05 000000086 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 162.716 ms 15-12-21 21:03:31.970 -05 000000086 INF: Z Motor: ArmAbsStepped took 212.622 ms 15-12-21 21:03:31.971 -05 000000086 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:31.980 -05 000000086 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:31.996 -05 000000086 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:03:31.997 -05 000000086 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:32.015 -05 000000086 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:03:32.020 -05 000000086 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:32.022 -05 000000086 INF: ====================================== 15-12-21 21:03:32.105 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:32.121 -05 000000041 INF: X Motor: Xmit PR ER\n 15-12-21 21:03:32.183 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:32.184 -05 000000041 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:03:32.184 -05 000000041 INF: X Motor: Moved to 17.9380 after 496 ms 15-12-21 21:03:32.185 -05 000000041 INF: ====================================== 15-12-21 21:03:32.433 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:32.517 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:32.540 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:32.574 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:32.574 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:32.725 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:32.767 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:32.777 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:32.777 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:32.838 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:32.886 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:32.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:32.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:33.098 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:33.192 -05 000000023 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:03:33.192 -05 000000023 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:03:33.192 -05 000000023 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:03:33.193 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:33.455 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:33.510 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:33.760 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:33.821 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:33.822 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 21:03:33.921 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P21120R\r 15-12-21 21:03:34.037 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:34.137 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:34.190 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:34.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:34.381 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:34.381 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:34.440 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:34.489 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:34.492 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:34.558 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:34.558 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:34.670 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:34.742 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:34.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:34.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:34.789 -05 000000023 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:03:34.789 -05 000000023 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:03:34.789 -05 000000023 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:03:34.793 -05 000000023 INF: ====================================== 15-12-21 21:03:34.796 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:34.804 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:34.804 -05 000000056 INF: ====================================== 15-12-21 21:03:34.998 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:35.054 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:35.058 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.755C:A1\r\n 15-12-21 21:03:35.058 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:35.116 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:35.306 -05 000000025 INF: Y Motor: Moved to 70.6885 after 3653 ms 15-12-21 21:03:35.310 -05 000000025 INF: ====================================== 15-12-21 21:03:35.311 -05 000000089 INF: ===================Move X,Y=================== 15-12-21 21:03:35.316 -05 000000089 INF: ====================================== 15-12-21 21:03:35.318 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:35.325 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:35.325 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:03:35.366 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:03:35.367 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:03:35.368 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:35.428 -05 000000055 INF: FPGA: Recv ZFREQCL 15-12-21 21:03:35.429 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:35.429 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:03:35.429 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:35.430 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:03:35.490 -05 000000041 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:03:35.490 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:03:35.491 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:35.492 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:35.497 -05 000000090 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:03:35.497 -05 000000038 INF: ===================TDI FPGA Arm=================== 15-12-21 21:03:35.497 -05 000000090 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:03:35.504 -05 000000038 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:35.506 -05 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:03:35.506 -05 000000038 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:03:35.553 -05 000000029 INF: FPGA: Recv TDIYPOS 15-12-21 21:03:35.553 -05 000000090 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:03:35.553 -05 000000038 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:35.554 -05 000000090 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:03:35.554 -05 000000090 INF: ====================================== 15-12-21 21:03:35.564 -05 000000038 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:03:35.566 -05 000000038 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:03:35.630 -05 000000055 INF: FPGA: Recv TDIYARM3 15-12-21 21:03:35.644 -05 000000038 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:35.647 -05 000000038 INF: ===================TDI FPGA Arm=================== 15-12-21 21:03:35.650 -05 000000038 INF: ====================================== 15-12-21 21:03:35.652 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:35.656 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:35.656 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:35.657 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:35.658 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:35.660 -05 000000040 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:03:35.660 -05 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:03:35.660 -05 000000040 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:03:35.660 -05 000000040 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:03:35.660 -05 000000040 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:03:35.660 -05 000000040 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:03:35.660 -05 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:03:35.660 -05 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:03:35.660 -05 000000078 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:03:35.663 -05 000000078 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:03:35.679 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:35.828 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:35.834 -05 000000055 INF: FPGA: Recv EX1MV 15-12-21 21:03:35.835 -05 000000040 INF: Excitation Filter 1: Moved -36 steps in 174.2551 ms 15-12-21 21:03:35.835 -05 000000040 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 174.3794 ms 15-12-21 21:03:35.835 -05 000000040 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 174.7158 ms 15-12-21 21:03:35.836 -05 000000040 INF: ====================================== 15-12-21 21:03:36.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:36.030 -05 000000089 INF: FPGA: Recv EX2MV 15-12-21 21:03:36.030 -05 000000078 INF: Excitation Filter 2: Moved -107 steps in 369.926 ms 15-12-21 21:03:36.031 -05 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 370.0612 ms 15-12-21 21:03:36.031 -05 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.1751 ms 15-12-21 21:03:36.032 -05 000000078 INF: ====================================== 15-12-21 21:03:36.035 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:36.044 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:36.050 -05 000000061 INF: ===================Move Y Motor without settling=================== 15-12-21 21:03:36.050 -05 000000056 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:36.050 -05 000000084 INF: ===================FPGA Z Wait=================== 15-12-21 21:03:36.050 -05 000000061 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:03:36.050 -05 000000084 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:03:36.050 -05 000000061 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:03:36.050 -05 000000025 INF: ===================Camera TDI=================== 15-12-21 21:03:36.052 -05 000000056 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:03:36.052 -05 000000025 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:03:36.068 -05 000000056 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:03:36.068 -05 000000061 INF: Y Motor: Xmit 1G\n 15-12-21 21:03:36.083 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:36.087 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 21:03:36.091 -05 000000061 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:03:36.091 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 21:03:36.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:36.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:36.147 -05 000000061 INF: Y Motor: Recv 1G\r\n 15-12-21 21:03:36.147 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:36.148 -05 000000061 INF: Y Motor: Xmit 1D\n 15-12-21 21:03:36.228 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:36.229 -05 000000061 INF: Y Motor: Recv 1D\r\n 15-12-21 21:03:36.230 -05 000000061 INF: Y Motor: Recv *407662\r\n 15-12-21 21:03:36.231 -05 000000061 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:03:36.287 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:36.287 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:36.395 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:36.397 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:36.411 -05 000000029 INF: FPGA: Recv ZWAIT 15-12-21 21:03:36.413 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:36.413 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:36.413 -05 000000084 INF: ====================================== 15-12-21 21:03:36.472 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:36.595 -05 000000041 INF: ===================Frame #5=================== 15-12-21 21:03:36.597 -05 000000090 INF: ===================Frame #2=================== 15-12-21 21:03:36.722 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:36.746 -05 000000041 INF: ===================Frame #17=================== 15-12-21 21:03:36.770 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:36.772 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:36.803 -05 000000090 INF: ===================Frame #22=================== 15-12-21 21:03:36.834 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.986C:A1\r\n 15-12-21 21:03:36.834 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:36.898 -05 000000041 INF: ===================Frame #29=================== 15-12-21 21:03:36.974 -05 000000090 INF: ===================Frame #35=================== 15-12-21 21:03:37.022 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:37.049 -05 000000041 INF: ===================Frame #41=================== 15-12-21 21:03:37.082 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:37.119 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:37.124 -05 000000090 INF: ===================Frame #47=================== 15-12-21 21:03:37.144 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.403C:A1\r\n 15-12-21 21:03:37.144 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:37.200 -05 000000041 INF: ===================Frame #53=================== 15-12-21 21:03:37.278 -05 000000090 INF: ===================Frame #59=================== 15-12-21 21:03:37.302 -05 000000020 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106, Registering and Extracting C029 L002 T1107=================== 15-12-21 21:03:37.332 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:37.351 -05 000000041 INF: ===================Frame #65=================== 15-12-21 21:03:37.352 -05 000000051 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106, Registering and Extracting C029 L002 T1107, Registering and Extracting C029 L002 T1109=================== 15-12-21 21:03:37.354 -05 000000072 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106, Registering and Extracting C029 L002 T1107=================== 15-12-21 21:03:37.359 -05 000000082 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104, Registering and Extracting C029 L002 T1105, Registering and Extracting C029 L002 T1106=================== 15-12-21 21:03:37.361 -05 000000034 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104=================== 15-12-21 21:03:37.361 -05 000000044 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103, Registering and Extracting C029 L002 T1104=================== 15-12-21 21:03:37.392 -05 000000031 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102, Registering and Extracting C029 L002 T1103=================== 15-12-21 21:03:37.394 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:37.395 -05 000000088 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1102=================== 15-12-21 21:03:37.408 -05 000000027 INF: ===================Registering and Extracting C029 L002 T1101=================== 15-12-21 21:03:37.429 -05 000000090 INF: ===================Frame #71=================== 15-12-21 21:03:37.452 -05 000000009 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114, Registering and Extracting C029 L002 T1115=================== 15-12-21 21:03:37.452 -05 000000068 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114, Registering and Extracting C029 L002 T1115=================== 15-12-21 21:03:37.452 -05 000000079 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114, Registering and Extracting C029 L002 T1115=================== 15-12-21 21:03:37.452 -05 000000054 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114, Registering and Extracting C029 L002 T1115, Registering and Extracting C029 L002 T1116=================== 15-12-21 21:03:37.452 -05 000000063 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114, Registering and Extracting C029 L002 T1115=================== 15-12-21 21:03:37.453 -05 000000048 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114, Registering and Extracting C029 L002 T1115=================== 15-12-21 21:03:37.454 -05 000000028 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114, Registering and Extracting C029 L002 T1115=================== 15-12-21 21:03:37.501 -05 000000041 INF: ===================Frame #77=================== 15-12-21 21:03:37.580 -05 000000090 INF: ===================Frame #83=================== 15-12-21 21:03:37.644 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:37.653 -05 000000041 INF: ===================Frame #89=================== 15-12-21 21:03:37.689 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:37.722 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:37.723 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:37.723 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:37.731 -05 000000090 INF: ===================Frame #95=================== 15-12-21 21:03:37.803 -05 000000041 INF: ===================Frame #101=================== 15-12-21 21:03:37.823 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:37.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:37.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:37.882 -05 000000090 INF: ===================Frame #107=================== 15-12-21 21:03:37.956 -05 000000041 INF: ===================Frame #113=================== 15-12-21 21:03:37.972 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:38.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:38.018 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:38.033 -05 000000090 INF: ===================Frame #119=================== 15-12-21 21:03:38.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:38.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:38.107 -05 000000041 INF: ===================Frame #125=================== 15-12-21 21:03:38.184 -05 000000090 INF: ===================Frame #131=================== 15-12-21 21:03:38.257 -05 000000041 INF: ===================Frame #137=================== 15-12-21 21:03:38.268 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:38.329 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:38.335 -05 000000090 INF: ===================Frame #143=================== 15-12-21 21:03:38.408 -05 000000041 INF: ===================Frame #149=================== 15-12-21 21:03:38.485 -05 000000090 INF: ===================Frame #155=================== 15-12-21 21:03:38.559 -05 000000041 INF: ===================Frame #161=================== 15-12-21 21:03:38.579 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:38.636 -05 000000090 INF: ===================Frame #167=================== 15-12-21 21:03:38.642 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:38.710 -05 000000041 INF: ===================Frame #173=================== 15-12-21 21:03:38.787 -05 000000090 INF: ===================Frame #179=================== 15-12-21 21:03:38.860 -05 000000041 INF: ===================Frame #184=================== 15-12-21 21:03:38.897 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:38.938 -05 000000090 INF: ===================Frame #191=================== 15-12-21 21:03:38.981 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:39.136 -05 000000090 INF: ===================Frame #206=================== 15-12-21 21:03:39.243 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:39.282 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:39.346 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:39.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:39.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:39.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:39.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:39.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:39.534 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:39.619 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:39.694 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:39.735 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:39.735 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:39.890 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:39.983 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:40.162 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:40.233 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:40.236 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.811C:A1\r\n 15-12-21 21:03:40.236 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:40.261 -05 000000041 INF: ===================Frame #295=================== 15-12-21 21:03:40.286 -05 000000090 INF: ===================Frame #297=================== 15-12-21 21:03:40.296 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:40.412 -05 000000041 INF: ===================Frame #307=================== 15-12-21 21:03:40.437 -05 000000090 INF: ===================Frame #309=================== 15-12-21 21:03:40.546 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:40.562 -05 000000041 INF: ===================Frame #319=================== 15-12-21 21:03:40.587 -05 000000090 INF: ===================Frame #321=================== 15-12-21 21:03:40.608 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:40.713 -05 000000041 INF: ===================Frame #331=================== 15-12-21 21:03:40.742 -05 000000090 INF: ===================Frame #333=================== 15-12-21 21:03:40.858 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:40.864 -05 000000041 INF: ===================Frame #343=================== 15-12-21 21:03:40.892 -05 000000090 INF: ===================Frame #345=================== 15-12-21 21:03:40.919 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:40.958 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:40.988 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:40.988 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:41.015 -05 000000041 INF: ===================Frame #355=================== 15-12-21 21:03:41.047 -05 000000090 INF: ===================Frame #357=================== 15-12-21 21:03:41.105 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:41.166 -05 000000041 INF: ===================Frame #367=================== 15-12-21 21:03:41.169 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:41.172 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:41.172 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:41.198 -05 000000090 INF: ===================Frame #369=================== 15-12-21 21:03:41.230 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:41.230 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 21:03:41.282 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:41.298 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:41.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:41.317 -05 000000041 INF: ===================Frame #379=================== 15-12-21 21:03:41.330 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:03:41.349 -05 000000090 INF: ===================Frame #381=================== 15-12-21 21:03:41.418 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 21:03:41.418 -05 000000062 INF: Current Position of Pump is: 21120 15-12-21 21:03:41.418 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:03:41.468 -05 000000041 INF: ===================Frame #391=================== 15-12-21 21:03:41.501 -05 000000090 INF: ===================Frame #393=================== 15-12-21 21:03:41.522 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:03:41.608 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:41.620 -05 000000041 INF: ===================Frame #403=================== 15-12-21 21:03:41.651 -05 000000090 INF: ===================Frame #405=================== 15-12-21 21:03:41.708 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:41.771 -05 000000041 INF: ===================Frame #414=================== 15-12-21 21:03:41.794 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:03:41.801 -05 000000090 INF: ===================Frame #417=================== 15-12-21 21:03:41.937 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:41.951 -05 000000090 INF: ===================Frame #429=================== 15-12-21 21:03:41.981 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 21:03:41.981 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:42.044 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:03:42.103 -05 000000090 INF: ===================Frame #441=================== 15-12-21 21:03:42.107 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:03:42.107 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:42.107 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 21:03:42.107 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:42.170 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:03:42.170 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:42.255 -05 000000090 INF: ===================Frame #453=================== 15-12-21 21:03:42.271 -05 000000041 INF: ===================Frame #454=================== 15-12-21 21:03:42.273 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:42.295 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.879C:A1\r\n 15-12-21 21:03:42.295 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:42.397 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:03:42.406 -05 000000090 INF: ===================Frame #465=================== 15-12-21 21:03:42.430 -05 000000063 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114, Registering and Extracting C029 L002 T1115=================== 15-12-21 21:03:42.481 -05 000000041 INF: ===================Frame #471=================== 15-12-21 21:03:42.556 -05 000000090 INF: ===================Frame #477=================== 15-12-21 21:03:42.632 -05 000000041 INF: ===================Frame #483=================== 15-12-21 21:03:42.649 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:03:42.707 -05 000000090 INF: ===================Frame #489=================== 15-12-21 21:03:42.732 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:03:42.732 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:42.782 -05 000000041 INF: ===================Frame #494=================== 15-12-21 21:03:42.834 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:42.834 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:42.835 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:42.836 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:42.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:03:42.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:03:42.841 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°, FC temperature to 65°=================== 15-12-21 21:03:42.875 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:42.875 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:42.897 -05 000000051 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113, Registering and Extracting C029 L002 T1114=================== 15-12-21 21:03:42.897 -05 000000090 INF: ===================Frame #500=================== 15-12-21 21:03:42.908 -05 000000048 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112, Registering and Extracting C029 L002 T1113=================== 15-12-21 21:03:42.973 -05 000000009 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111, Registering and Extracting C029 L002 T1112=================== 15-12-21 21:03:42.995 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:65.00\r 15-12-21 21:03:43.096 -05 000000041 INF: ===================Frame #519=================== 15-12-21 21:03:43.097 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:03:43.097 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:43.119 -05 000000068 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110, Registering and Extracting C029 L002 T1111=================== 15-12-21 21:03:43.270 -05 000000041 INF: ===================Frame #531=================== 15-12-21 21:03:43.339 -05 000000079 INF: ===================Registering and Extracting C029 L002 T1101, Registering and Extracting C029 L002 T1110=================== 15-12-21 21:03:43.343 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:43.344 -05 000000028 INF: ===================Registering and Extracting C029 L002 T1101=================== 15-12-21 21:03:43.345 -05 000000054 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:03:43.404 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:43.404 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:43.416 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:43.421 -05 000000041 INF: ===================Frame #545=================== 15-12-21 21:03:43.425 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:03:43.507 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 21:03:43.526 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:03:43.526 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:43.556 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:43.563 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:03:43.571 -05 000000041 INF: ===================Frame #557=================== 15-12-21 21:03:43.628 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:43.628 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:03:43.629 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:03:43.631 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:03:43.633 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 21:03:43.639 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:43.640 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:43.642 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:43.642 -05 000000062 INF: WaitCommand(25000) start 15-12-21 21:03:43.643 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 25 of 25 seconds left=================== 15-12-21 21:03:43.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:43.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:43.713 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:43.723 -05 000000041 INF: ===================Frame #569=================== 15-12-21 21:03:43.731 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:03:43.939 -05 000000041 INF: ===================Frame #586=================== 15-12-21 21:03:43.993 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:44.004 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:03:44.111 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:44.124 -05 000000090 INF: ===================Frame #601=================== 15-12-21 21:03:44.236 -05 000000041 INF: ===================Frame #609=================== 15-12-21 21:03:44.275 -05 000000090 INF: ===================Frame #613=================== 15-12-21 21:03:44.386 -05 000000041 INF: ===================Frame #621=================== 15-12-21 21:03:44.426 -05 000000090 INF: ===================Frame #624=================== 15-12-21 21:03:44.538 -05 000000041 INF: ===================Frame #633=================== 15-12-21 21:03:44.643 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:44.643 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 24 of 25 seconds left=================== 15-12-21 21:03:44.689 -05 000000041 INF: ===================Frame #645=================== 15-12-21 21:03:44.840 -05 000000041 INF: ===================Frame #657=================== 15-12-21 21:03:44.896 -05 000000090 INF: ===================Frame #662=================== 15-12-21 21:03:44.992 -05 000000041 INF: ===================Frame #669=================== 15-12-21 21:03:44.993 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:45.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:45.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:45.114 -05 000000090 INF: ===================Frame #679=================== 15-12-21 21:03:45.116 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:45.134 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:45.134 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:45.142 -05 000000041 INF: ===================Frame #681=================== 15-12-21 21:03:45.244 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:45.265 -05 000000090 INF: ===================Frame #691=================== 15-12-21 21:03:45.293 -05 000000041 INF: ===================Frame #693=================== 15-12-21 21:03:45.320 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:45.320 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:45.397 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 21:03:45.416 -05 000000090 INF: ===================Frame #703=================== 15-12-21 21:03:45.420 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:45.444 -05 000000041 INF: ===================Frame #705=================== 15-12-21 21:03:45.448 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.916C:A1\r\n 15-12-21 21:03:45.448 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:45.566 -05 000000090 INF: ===================Frame #715=================== 15-12-21 21:03:45.594 -05 000000041 INF: ===================Frame #717=================== 15-12-21 21:03:45.644 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:45.645 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 23 of 25 seconds left=================== 15-12-21 21:03:45.716 -05 000000090 INF: ===================Frame #726=================== 15-12-21 21:03:45.744 -05 000000041 INF: ===================Frame #729=================== 15-12-21 21:03:45.895 -05 000000041 INF: ===================Frame #741=================== 15-12-21 21:03:45.925 -05 000000090 INF: ===================Frame #743=================== 15-12-21 21:03:46.045 -05 000000041 INF: ===================Frame #752=================== 15-12-21 21:03:46.075 -05 000000090 INF: ===================Frame #755=================== 15-12-21 21:03:46.225 -05 000000090 INF: ===================Frame #767=================== 15-12-21 21:03:46.364 -05 000000041 INF: ===================Frame #778=================== 15-12-21 21:03:46.376 -05 000000090 INF: ===================Frame #779=================== 15-12-21 21:03:46.526 -05 000000090 INF: ===================Frame #791=================== 15-12-21 21:03:46.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:46.562 -05 000000041 INF: ===================Frame #793=================== 15-12-21 21:03:46.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:46.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:46.645 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:46.645 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 22 of 25 seconds left=================== 15-12-21 21:03:46.670 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:46.677 -05 000000090 INF: ===================Frame #802=================== 15-12-21 21:03:46.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:46.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:46.712 -05 000000041 INF: ===================Frame #805=================== 15-12-21 21:03:46.794 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:46.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:46.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:46.862 -05 000000041 INF: ===================Frame #817=================== 15-12-21 21:03:46.915 -05 000000090 INF: ===================Frame #821=================== 15-12-21 21:03:47.013 -05 000000041 INF: ===================Frame #829=================== 15-12-21 21:03:47.065 -05 000000090 INF: ===================Frame #833=================== 15-12-21 21:03:47.082 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:47.134 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 21:03:47.134 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:47.164 -05 000000041 INF: ===================Frame #841=================== 15-12-21 21:03:47.216 -05 000000090 INF: ===================Frame #845=================== 15-12-21 21:03:47.315 -05 000000041 INF: ===================Frame #853=================== 15-12-21 21:03:47.367 -05 000000090 INF: ===================Frame #857=================== 15-12-21 21:03:47.397 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:47.441 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 62.659C:A1\r\n 15-12-21 21:03:47.441 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:47.466 -05 000000041 INF: ===================Frame #865=================== 15-12-21 21:03:47.517 -05 000000090 INF: ===================Frame #869=================== 15-12-21 21:03:47.617 -05 000000041 INF: ===================Frame #877=================== 15-12-21 21:03:47.646 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:47.646 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 21 of 25 seconds left=================== 15-12-21 21:03:47.668 -05 000000090 INF: ===================Frame #881=================== 15-12-21 21:03:47.769 -05 000000041 INF: ===================Frame #889=================== 15-12-21 21:03:47.818 -05 000000090 INF: ===================Frame #893=================== 15-12-21 21:03:47.919 -05 000000041 INF: ===================Frame #901=================== 15-12-21 21:03:47.968 -05 000000090 INF: ===================Frame #904=================== 15-12-21 21:03:48.050 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:48.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:48.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:48.070 -05 000000041 INF: ===================Frame #912=================== 15-12-21 21:03:48.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:48.189 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:48.189 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:48.245 -05 000000090 INF: ===================Frame #926=================== 15-12-21 21:03:48.292 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:48.314 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:48.314 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:48.397 -05 000000041 INF: ===================Frame #938=================== 15-12-21 21:03:48.427 -05 000000090 INF: ===================Frame #941=================== 15-12-21 21:03:48.577 -05 000000090 INF: ===================Frame #953=================== 15-12-21 21:03:48.578 -05 000000041 INF: ===================Frame #953=================== 15-12-21 21:03:48.646 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:48.646 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 20 of 25 seconds left=================== 15-12-21 21:03:48.728 -05 000000090 INF: ===================Frame #965=================== 15-12-21 21:03:48.728 -05 000000041 INF: ===================Frame #965=================== 15-12-21 21:03:48.879 -05 000000090 INF: ===================Frame #977=================== 15-12-21 21:03:48.883 -05 000000041 INF: ===================Frame #977=================== 15-12-21 21:03:49.033 -05 000000090 INF: ===================Frame #989=================== 15-12-21 21:03:49.033 -05 000000041 INF: ===================Frame #989=================== 15-12-21 21:03:49.183 -05 000000090 INF: ===================Frame #1001=================== 15-12-21 21:03:49.183 -05 000000041 INF: ===================Frame #1001=================== 15-12-21 21:03:49.335 -05 000000090 INF: ===================Frame #1012=================== 15-12-21 21:03:49.335 -05 000000041 INF: ===================Frame #1012=================== 15-12-21 21:03:49.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:49.563 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:49.563 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:49.646 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:49.647 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 19 of 25 seconds left=================== 15-12-21 21:03:49.668 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:49.685 -05 000000041 INF: ===================Frame #1040=================== 15-12-21 21:03:49.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:49.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:49.699 -05 000000090 INF: ===================Frame #1041=================== 15-12-21 21:03:49.788 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:49.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:49.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:49.849 -05 000000090 INF: ===================Frame #1053=================== 15-12-21 21:03:49.866 -05 000000041 INF: ===================Frame #1055=================== 15-12-21 21:03:50.001 -05 000000090 INF: ===================Frame #1065=================== 15-12-21 21:03:50.017 -05 000000041 INF: ===================Frame #1066=================== 15-12-21 21:03:50.152 -05 000000090 INF: ===================Frame #1077=================== 15-12-21 21:03:50.218 -05 000000041 INF: ===================Frame #1082=================== 15-12-21 21:03:50.302 -05 000000090 INF: ===================Frame #1089=================== 15-12-21 21:03:50.388 -05 000000041 INF: ===================Frame #1096=================== 15-12-21 21:03:50.455 -05 000000090 INF: ===================Frame #1101=================== 15-12-21 21:03:50.552 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:50.555 -05 000000041 INF: ===================Frame #1109=================== 15-12-21 21:03:50.606 -05 000000090 INF: ===================Frame #1113=================== 15-12-21 21:03:50.625 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.970C:A1\r\n 15-12-21 21:03:50.625 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:50.647 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:50.647 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 18 of 25 seconds left=================== 15-12-21 21:03:50.705 -05 000000041 INF: ===================Frame #1121=================== 15-12-21 21:03:50.757 -05 000000090 INF: ===================Frame #1125=================== 15-12-21 21:03:50.856 -05 000000041 INF: ===================Frame #1133=================== 15-12-21 21:03:50.907 -05 000000090 INF: ===================Frame #1137=================== 15-12-21 21:03:51.007 -05 000000041 INF: ===================Frame #1145=================== 15-12-21 21:03:51.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:51.057 -05 000000090 INF: ===================Frame #1149=================== 15-12-21 21:03:51.060 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:51.060 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:51.158 -05 000000041 INF: ===================Frame #1157=================== 15-12-21 21:03:51.161 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:51.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:51.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:51.207 -05 000000090 INF: ===================Frame #1161=================== 15-12-21 21:03:51.286 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:51.309 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:51.309 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:51.309 -05 000000041 INF: ===================Frame #1169=================== 15-12-21 21:03:51.357 -05 000000090 INF: ===================Frame #1172=================== 15-12-21 21:03:51.461 -05 000000041 INF: ===================Frame #1180=================== 15-12-21 21:03:51.649 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:51.650 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 17 of 25 seconds left=================== 15-12-21 21:03:51.811 -05 000000041 INF: ===================Frame #1208=================== 15-12-21 21:03:51.833 -05 000000090 INF: ===================Frame #1210=================== 15-12-21 21:03:52.023 -05 000000041 INF: ===================Frame #1225=================== 15-12-21 21:03:52.056 -05 000000090 INF: ===================Frame #1228=================== 15-12-21 21:03:52.174 -05 000000041 INF: ===================Frame #1237=================== 15-12-21 21:03:52.231 -05 000000090 INF: ===================Frame #1241=================== 15-12-21 21:03:52.242 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:52.309 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 21:03:52.309 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:52.324 -05 000000041 INF: ===================Frame #1249=================== 15-12-21 21:03:52.369 -05 000000078 INF: FPGA: Recv TDIYWAIT 15-12-21 21:03:52.370 -05 000000056 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:52.373 -05 000000056 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:03:52.375 -05 000000023 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:03:52.380 -05 000000023 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:03:52.380 -05 000000023 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:03:52.380 -05 000000023 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:03:52.380 -05 000000023 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:03:52.385 -05 000000040 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:03:52.385 -05 000000090 INF: ===================Frame #1250=================== 15-12-21 21:03:52.389 -05 000000040 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:03:52.389 -05 000000040 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:03:52.389 -05 000000040 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:03:52.389 -05 000000040 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:03:52.421 -05 000000090 INF: Camera complete - got 1250 frames. 15-12-21 21:03:52.423 -05 000000090 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:03:52.539 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 21:03:52.539 -05 000000041 INF: ===================Frame #1250=================== 15-12-21 21:03:52.557 -05 000000084 INF: FPGA: Recv EX1MV 15-12-21 21:03:52.557 -05 000000023 INF: Excitation Filter 1: Moved 36 steps in 176.9326 ms 15-12-21 21:03:52.557 -05 000000023 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 177.0491 ms 15-12-21 21:03:52.557 -05 000000023 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 177.1391 ms 15-12-21 21:03:52.558 -05 000000023 INF: ====================================== 15-12-21 21:03:52.573 -05 000000090 INF: ====================================== 15-12-21 21:03:52.599 -05 000000041 INF: Camera complete - got 1250 frames. 15-12-21 21:03:52.601 -05 000000041 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:03:52.605 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:52.621 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.160C:A1\r\n 15-12-21 21:03:52.621 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:52.650 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:52.651 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 16 of 25 seconds left=================== 15-12-21 21:03:52.719 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:52.719 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 21:03:52.743 -05 000000041 INF: ====================================== 15-12-21 21:03:52.745 -05 000000025 INF: ===================Camera TDI=================== 15-12-21 21:03:52.748 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:52.748 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:52.749 -05 000000025 INF: ====================================== 15-12-21 21:03:52.806 -05 000000090 INF: FPGA: Recv EX2MV 15-12-21 21:03:52.806 -05 000000040 INF: Excitation Filter 2: Moved 107 steps in 417.2001 ms 15-12-21 21:03:52.806 -05 000000040 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 417.3222 ms 15-12-21 21:03:52.806 -05 000000040 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 417.4189 ms 15-12-21 21:03:52.807 -05 000000040 INF: ====================================== 15-12-21 21:03:52.808 -05 000000056 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:52.810 -05 000000056 INF: ====================================== 15-12-21 21:03:52.855 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:52.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:52.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:53.037 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:53.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:53.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:53.105 -05 000000061 INF: Y Motor: Moved to 9.0764 after 16872 ms 15-12-21 21:03:53.105 -05 000000061 INF: ====================================== 15-12-21 21:03:53.109 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:53.110 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:53.116 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.117 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:03:53.182 -05 000000060 INF: FPGA: Recv TDICLINES 9477 15-12-21 21:03:53.182 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:03:53.300 -05 000000089 INF: FPGA: Recv TDIYERD 907645 15-12-21 21:03:53.300 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 21:03:53.357 -05 000000084 INF: FPGA: Recv ZADCR 37775 15-12-21 21:03:53.365 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.144. Y moved -60.304 mm 15-12-21 21:03:53.366 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:03:53.419 -05 000000086 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:03:53.419 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:03:53.424 -05 000000057 INF: TDIScan finished after 22054.8522 ms 15-12-21 21:03:53.424 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:03:53.424 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:03:53.426 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.456 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.096 um 15-12-21 21:03:53.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.461 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.462 -05 000000041 INF: ===================Dither Clean Up Command=================== 15-12-21 21:03:53.463 -05 000000078 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:03:53.463 -05 000000025 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:03:53.463 -05 000000078 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:03:53.463 -05 000000025 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:03:53.463 -05 000000025 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:03:53.467 -05 000000084 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:03:53.469 -05 000000061 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:03:53.469 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:53.470 -05 000000045 INF: ===================LFT:Extracting coords=================== 15-12-21 21:03:53.470 -05 000000061 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:03:53.478 -05 000000056 INF: FPGA: Recv ZSTEP 15-12-21 21:03:53.478 -05 000000056 INF: FPGA: Recv ZSEL 15-12-21 21:03:53.478 -05 000000061 INF: FPGA: Xmit ZDACW 42705\n 15-12-21 21:03:53.478 -05 000000025 INF: ====================================== 15-12-21 21:03:53.506 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:53.510 -05 000000045 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:03:53.511 -05 000000078 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:03:53.512 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:53.513 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:53.513 -05 000000084 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:03:53.513 -05 000000078 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:03:53.513 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:53.515 -05 000000086 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:53.515 -05 000000078 INF: ====================================== 15-12-21 21:03:53.515 -05 000000025 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:53.515 -05 000000040 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:53.518 -05 000000025 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:53.518 -05 000000040 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:03:53.541 -05 000000060 INF: FPGA: Recv ZDACW 15-12-21 21:03:53.542 -05 000000061 INF: ====================================== 15-12-21 21:03:53.573 -05 000000084 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:03:53.574 -05 000000084 INF: ====================================== 15-12-21 21:03:53.651 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:53.651 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 15 of 25 seconds left=================== 15-12-21 21:03:53.686 -05 000000090 INF: LFT found best fwhm score 2.83466 in 126 ms 15-12-21 21:03:53.687 -05 000000090 INF: LFT found good score at index 5785 with fwhm value 2.83466. Next cycle, cycle 30 starting Z position for top surface is at -0.164 mm FC:A, C:29,L:2,T 15-12-21 21:03:53.687 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:53.687 -05 000000090 INF: ====================================== 15-12-21 21:03:53.688 -05 000000086 INF: LFT found best fwhm score 2.888181 in 127 ms 15-12-21 21:03:53.688 -05 000000086 INF: LFT found good score at index 8213 with fwhm value 2.888181. Next cycle, cycle 30 starting Z position for top surface is at -0.164 mm FC:A, C:29,L:2,T 15-12-21 21:03:53.688 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:53.688 -05 000000086 INF: ====================================== 15-12-21 21:03:53.731 -05 000000025 INF: LFT found best fwhm score 2.857853 in 171 ms 15-12-21 21:03:53.731 -05 000000025 INF: LFT found good score at index 2441 with fwhm value 2.857853. Next cycle, cycle 30 starting Z position for top surface is at -0.165 mm FC:A, C:29,L:2,T 15-12-21 21:03:53.732 -05 000000040 INF: LFT found best fwhm score 3.04753 in 170 ms 15-12-21 21:03:53.732 -05 000000040 INF: LFT found good score at index 8161 with fwhm value 3.04753. Next cycle, cycle 30 starting Z position for top surface is at -0.164 mm FC:A, C:29,L:2,T 15-12-21 21:03:53.732 -05 000000025 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:53.732 -05 000000040 INF: ===================LookupFocusTracking=================== 15-12-21 21:03:53.732 -05 000000025 INF: ====================================== 15-12-21 21:03:53.732 -05 000000040 INF: ====================================== 15-12-21 21:03:53.739 -05 000000045 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:03:53.743 -05 000000045 INF: LFT weighted average best Z for top surface is at -0.164mm FC:A, C:29,L:2,T 15-12-21 21:03:53.743 -05 000000045 INF: ====================================== 15-12-21 21:03:53.747 -05 000000041 INF: ====================================== 15-12-21 21:03:53.748 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.753 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:03:53.753 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.753 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:03:53.753 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.753 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:03:53.753 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.753 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:03:53.754 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:53.754 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:03:53.754 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:03:53.755 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:03:53.755 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:03:53.755 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 15 of 25 seconds left, Waiting for image analysis=================== 15-12-21 21:03:53.755 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 15 of 25 seconds left=================== 15-12-21 21:03:53.756 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 15-12-21 21:03:53.756 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:53.756 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:53.757 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:03:53.757 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface, Lane 2=================== 15-12-21 21:03:53.757 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Top Surface=================== 15-12-21 21:03:53.757 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:03:53.758 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface=================== 15-12-21 21:03:53.758 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:03:53.761 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface=================== 15-12-21 21:03:53.763 -05 000000057 INF: Compensator: Moving OutOfPath 15-12-21 21:03:53.763 -05 000000057 INF: FPGA: Xmit MIOCOMPR\n 15-12-21 21:03:53.763 -05 000000079 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203=================== 15-12-21 21:03:53.763 -05 000000068 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203=================== 15-12-21 21:03:53.764 -05 000000063 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204=================== 15-12-21 21:03:53.764 -05 000000028 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205=================== 15-12-21 21:03:53.764 -05 000000054 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203=================== 15-12-21 21:03:53.764 -05 000000009 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206=================== 15-12-21 21:03:53.767 -05 000000048 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1207=================== 15-12-21 21:03:53.769 -05 000000051 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1207, Registering and Extracting C029 L002 T1208=================== 15-12-21 21:03:54.102 -05 000000061 INF: FPGA: Recv MIOCOMPR 15-12-21 21:03:54.103 -05 000000057 INF: Compensator: Moved OutOfPath in 340 ms 15-12-21 21:03:54.103 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface=================== 15-12-21 21:03:54.181 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:03:54.181 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:03:54.182 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:03:54.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:03:54.194 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:03:54.194 -05 000000057 INF: Compensator: Remaining OutOfPath 15-12-21 21:03:54.194 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:03:54.197 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:03:54.318 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:03:54.320 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:03:54.358 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:54.358 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:03:54.358 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:54.358 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -162.9 um, section = A_1 15-12-21 21:03:54.360 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:54.361 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:54.362 -05 000000041 INF: ===================MoveEmissionFilters=================== 15-12-21 21:03:54.362 -05 000000061 INF: ===================Move X,Y=================== 15-12-21 21:03:54.362 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:54.363 -05 000000061 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:03:54.363 -05 000000045 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:03:54.363 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:03:54.363 -05 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:03:54.364 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:03:54.364 -05 000000078 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:03:54.364 -05 000000078 INF: Z Motor: Moving to -0.1109 mm, started at -0.1629 mm 15-12-21 21:03:54.364 -05 000000078 INF: FPGA: Xmit ZTRG 0\n 15-12-21 21:03:54.364 -05 000000092 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:03:54.364 -05 000000086 INF: ===================Move Y Motor without settling=================== 15-12-21 21:03:54.373 -05 000000086 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 21:03:54.373 -05 000000090 INF: FPGA: Recv ZTRG 15-12-21 21:03:54.373 -05 000000078 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 21:03:54.373 -05 000000045 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:03:54.373 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:03:54.392 -05 000000086 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:03:54.392 -05 000000084 INF: ===================Move X Motor without settling=================== 15-12-21 21:03:54.392 -05 000000092 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:03:54.392 -05 000000084 INF: X Motor: Xmit PR VM\n 15-12-21 21:03:54.392 -05 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:03:54.393 -05 000000086 INF: Y Motor: Xmit 1G\n 15-12-21 21:03:54.393 -05 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:03:54.419 -05 000000090 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:03:54.420 -05 000000060 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:03:54.420 -05 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:03:54.420 -05 000000056 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:03:54.438 -05 000000090 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:03:54.438 -05 000000040 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:03:54.439 -05 000000089 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:03:54.439 -05 000000060 INF: ====================================== 15-12-21 21:03:54.440 -05 000000040 INF: ====================================== 15-12-21 21:03:54.462 -05 000000056 INF: ====================================== 15-12-21 21:03:54.462 -05 000000089 INF: ====================================== 15-12-21 21:03:54.463 -05 000000029 INF: ====================================== 15-12-21 21:03:54.478 -05 000000090 INF: ====================================== 15-12-21 21:03:54.479 -05 000000037 INF: ====================================== 15-12-21 21:03:54.479 -05 000000060 INF: FPGA: Recv ZYT 15-12-21 21:03:54.507 -05 000000086 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:03:54.508 -05 000000078 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 21:03:54.508 -05 000000078 INF: FPGA: Xmit ZMV 29061\n 15-12-21 21:03:54.509 -05 000000086 INF: Y Motor: Recv 1G\r\n 15-12-21 21:03:54.510 -05 000000084 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:03:54.510 -05 000000084 INF: X Motor: Xmit PR VI\n 15-12-21 21:03:54.510 -05 000000086 INF: Y Motor: Xmit 1D\n 15-12-21 21:03:54.511 -05 000000040 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:03:54.511 -05 000000045 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:03:54.511 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:03:54.512 -05 000000040 INF: ====================================== 15-12-21 21:03:54.512 -05 000000092 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:03:54.616 -05 000000029 INF: FPGA: Recv ZMV 15-12-21 21:03:54.616 -05 000000078 INF: Z Motor: MoveAndTrigger 'ZMV' command took 107.9966 ms 15-12-21 21:03:54.616 -05 000000078 INF: FPGA: Xmit ZDACR\n 15-12-21 21:03:54.617 -05 000000086 INF: Y Motor: Recv 1D\r\n 15-12-21 21:03:54.617 -05 000000023 INF: ====================================== 15-12-21 21:03:54.617 -05 000000045 INF: ====================================== 15-12-21 21:03:54.641 -05 000000084 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:03:54.641 -05 000000084 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:03:54.643 -05 000000084 INF: X Motor: Moving to 12.8720 mm @15.000 mm/sec, started at 17.9380 mm 15-12-21 21:03:54.643 -05 000000092 INF: ====================================== 15-12-21 21:03:54.643 -05 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:03:54.643 -05 000000084 INF: X Motor: Xmit MA -18894\n 15-12-21 21:03:54.643 -05 000000086 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:03:54.672 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:54.672 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 14 of 25 seconds left=================== 15-12-21 21:03:54.699 -05 000000086 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:03:54.705 -05 000000056 INF: FPGA: Recv ZDACR 29061 15-12-21 21:03:54.706 -05 000000078 INF: Z Motor: MoveAndTrigger took 341.6794 ms w/comms 15-12-21 21:03:54.706 -05 000000078 INF: Z Motor: After move to -0.1109, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:03:54.706 -05 000000078 INF: Z Motor: MoveAbsStepped took 341.7792 ms 15-12-21 21:03:54.729 -05 000000084 INF: X Motor: Recv MA -18894\r\n> 15-12-21 21:03:54.730 -05 000000084 INF: X Motor: WaitUntilStopped 60338 15-12-21 21:03:54.730 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:54.730 -05 000000025 INF: ====================================== 15-12-21 21:03:54.785 -05 000000041 INF: ====================================== 15-12-21 21:03:54.788 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:03:54.804 -05 000000023 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:54.804 -05 000000040 INF: ===================Camera Arm TDI=================== 15-12-21 21:03:54.813 -05 000000023 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:54.818 -05 000000023 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:03:54.819 -05 000000023 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:03:54.827 -05 000000023 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:03:54.835 -05 000000092 INF: FPGA: Recv ZSEL 15-12-21 21:03:54.839 -05 000000023 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:03:54.839 -05 000000023 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:54.854 -05 000000023 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:03:54.855 -05 000000023 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:03:54.855 -05 000000023 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:03:54.867 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:54.896 -05 000000092 INF: FPGA: Recv ZSTEP 15-12-21 21:03:54.897 -05 000000023 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:54.898 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:54.898 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:54.900 -05 000000023 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:03:54.901 -05 000000023 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:54.912 -05 000000023 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:03:54.912 -05 000000023 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:03:54.912 -05 000000023 INF: Z Motor: Arming to move to -0.0709 mm 15-12-21 21:03:54.912 -05 000000023 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:03:54.965 -05 000000092 INF: FPGA: Recv ZYT 15-12-21 21:03:54.966 -05 000000023 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907643 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:03:54.966 -05 000000023 INF: FPGA: Xmit ZARM 18575\n 15-12-21 21:03:55.011 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:55.021 -05 000000089 INF: FPGA: Recv ZARM 15-12-21 21:03:55.021 -05 000000023 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 55.1467 ms 15-12-21 21:03:55.021 -05 000000023 INF: Z Motor: ArmAbsStepped took 109.0509 ms 15-12-21 21:03:55.022 -05 000000023 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:03:55.023 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:55.023 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:55.059 -05 000000023 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:55.126 -05 000000023 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:03:55.126 -05 000000023 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:55.264 -05 000000023 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:03:55.265 -05 000000023 INF: ===================TDI Scan Setup=================== 15-12-21 21:03:55.268 -05 000000023 INF: ====================================== 15-12-21 21:03:55.464 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:55.493 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:55.493 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:55.553 -05 000000084 INF: X Motor: Xmit PR ER\n 15-12-21 21:03:55.618 -05 000000084 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:03:55.618 -05 000000084 INF: X Motor: Moved to 12.8696 after 888 ms 15-12-21 21:03:55.620 -05 000000084 INF: ====================================== 15-12-21 21:03:55.738 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:03:55.739 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:55.740 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 13 of 25 seconds left=================== 15-12-21 21:03:55.868 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.009C:A1\r\n 15-12-21 21:03:55.868 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:56.746 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:56.746 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 12 of 25 seconds left=================== 15-12-21 21:03:56.803 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:56.818 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:56.818 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:56.852 -05 000000040 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:03:56.852 -05 000000040 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:03:56.852 -05 000000040 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:03:56.928 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:56.942 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:56.942 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:57.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:57.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:57.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:57.424 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:03:57.441 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.019C:A1\r\n 15-12-21 21:03:57.441 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:57.719 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:03:57.747 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:57.748 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 11 of 25 seconds left=================== 15-12-21 21:03:57.755 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.903C:A1\r\n 15-12-21 21:03:57.755 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:58.067 -05 000000086 INF: Y Motor: Moved to 70.6886 after 3368 ms 15-12-21 21:03:58.068 -05 000000086 INF: ====================================== 15-12-21 21:03:58.084 -05 000000061 INF: ===================Move X,Y=================== 15-12-21 21:03:58.086 -05 000000061 INF: ====================================== 15-12-21 21:03:58.298 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:03:58.316 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:03:58.316 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:58.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:03:58.442 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:58.442 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:58.491 -05 000000040 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:03:58.491 -05 000000040 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:03:58.491 -05 000000040 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:03:58.493 -05 000000040 INF: ====================================== 15-12-21 21:03:58.501 -05 000000078 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:03:58.506 -05 000000078 INF: ====================================== 15-12-21 21:03:58.508 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:03:58.517 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:58.521 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:03:58.569 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:03:58.570 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:03:58.585 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:03:58.625 -05 000000038 INF: FPGA: Recv ZFREQCL 15-12-21 21:03:58.626 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:03:58.627 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:03:58.627 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:03:58.627 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:58.627 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:03:58.756 -05 000000084 INF: FPGA: Recv TDIYERD 7068849 15-12-21 21:03:58.757 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:58.757 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 21:03:58.757 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 10 of 25 seconds left=================== 15-12-21 21:03:58.758 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:58.762 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:58.763 -05 000000025 INF: ===================TDI FPGA Arm=================== 15-12-21 21:03:58.763 -05 000000056 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:03:58.763 -05 000000056 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:03:58.769 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:58.772 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:03:58.772 -05 000000025 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:03:58.829 -05 000000041 INF: FPGA: Recv TDIYPOS 15-12-21 21:03:58.830 -05 000000056 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:03:58.830 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:58.831 -05 000000056 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:03:58.831 -05 000000056 INF: ====================================== 15-12-21 21:03:58.838 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:03:58.838 -05 000000025 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:03:58.890 -05 000000061 INF: FPGA: Recv TDIYARM3 15-12-21 21:03:58.892 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:03:58.905 -05 000000025 INF: ===================TDI FPGA Arm=================== 15-12-21 21:03:58.909 -05 000000025 INF: ====================================== 15-12-21 21:03:58.926 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:03:58.931 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:03:58.931 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:58.933 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:58.935 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:58.937 -05 000000041 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:03:58.937 -05 000000041 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:03:58.937 -05 000000041 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:03:58.937 -05 000000041 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:03:58.937 -05 000000038 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:03:58.938 -05 000000041 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:03:58.938 -05 000000038 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:03:58.938 -05 000000038 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:03:58.938 -05 000000038 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:03:58.957 -05 000000038 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:03:59.078 -05 000000086 INF: FPGA: Recv EX1MV 15-12-21 21:03:59.078 -05 000000041 INF: Excitation Filter 1: Moved -36 steps in 140.5591 ms 15-12-21 21:03:59.078 -05 000000041 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 140.7092 ms 15-12-21 21:03:59.078 -05 000000041 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 140.8217 ms 15-12-21 21:03:59.080 -05 000000041 INF: ====================================== 15-12-21 21:03:59.327 -05 000000045 INF: FPGA: Recv EX2MV 15-12-21 21:03:59.327 -05 000000038 INF: Excitation Filter 2: Moved -107 steps in 388.8806 ms 15-12-21 21:03:59.327 -05 000000038 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 389.0757 ms 15-12-21 21:03:59.327 -05 000000038 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 389.2032 ms 15-12-21 21:03:59.328 -05 000000038 INF: ====================================== 15-12-21 21:03:59.330 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:59.335 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:03:59.338 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:03:59.339 -05 000000090 INF: ===================Move Y Motor without settling=================== 15-12-21 21:03:59.339 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:03:59.339 -05 000000090 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 21:03:59.340 -05 000000090 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:03:59.341 -05 000000090 INF: Y Motor: Xmit 1G\n 15-12-21 21:03:59.341 -05 000000061 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:03:59.341 -05 000000092 INF: ===================FPGA Z Wait=================== 15-12-21 21:03:59.342 -05 000000061 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:03:59.343 -05 000000078 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:03:59.344 -05 000000092 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:03:59.352 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 21:03:59.353 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 21:03:59.394 -05 000000090 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:03:59.395 -05 000000090 INF: Y Motor: Recv 1G\r\n 15-12-21 21:03:59.396 -05 000000090 INF: Y Motor: Xmit 1D\n 15-12-21 21:03:59.471 -05 000000090 INF: Y Motor: Recv 1D\r\n 15-12-21 21:03:59.516 -05 000000090 INF: Y Motor: Recv *407662\r\n 15-12-21 21:03:59.520 -05 000000090 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:03:59.638 -05 000000045 INF: FPGA: Recv ZWAIT 15-12-21 21:03:59.639 -05 000000092 INF: ====================================== 15-12-21 21:03:59.757 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:03:59.758 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 9 of 25 seconds left=================== 15-12-21 21:03:59.815 -05 000000089 INF: ===================Frame #2=================== 15-12-21 21:03:59.819 -05 000000041 INF: ===================Frame #2=================== 15-12-21 21:03:59.880 -05 000000068 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1207=================== 15-12-21 21:03:59.957 -05 000000027 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1207, Registering and Extracting C029 L002 T1209=================== 15-12-21 21:03:59.967 -05 000000089 INF: ===================Frame #14=================== 15-12-21 21:03:59.975 -05 000000041 INF: ===================Frame #14=================== 15-12-21 21:03:59.998 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:00.017 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:00.017 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:00.124 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:00.141 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:00.141 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:00.147 -05 000000089 INF: ===================Frame #28=================== 15-12-21 21:04:00.151 -05 000000041 INF: ===================Frame #28=================== 15-12-21 21:04:00.204 -05 000000028 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1207=================== 15-12-21 21:04:00.255 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:00.257 -05 000000088 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1207, Registering and Extracting C029 L002 T1210=================== 15-12-21 21:04:00.265 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:00.265 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:00.268 -05 000000063 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1207=================== 15-12-21 21:04:00.335 -05 000000009 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206=================== 15-12-21 21:04:00.358 -05 000000072 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1211, Registering and Extracting C029 L002 T1212=================== 15-12-21 21:04:00.358 -05 000000031 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1211, Registering and Extracting C029 L002 T1212=================== 15-12-21 21:04:00.375 -05 000000089 INF: ===================Frame #46=================== 15-12-21 21:04:00.379 -05 000000041 INF: ===================Frame #47=================== 15-12-21 21:04:00.424 -05 000000054 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206, Registering and Extracting C029 L002 T1211=================== 15-12-21 21:04:00.425 -05 000000048 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205, Registering and Extracting C029 L002 T1206=================== 15-12-21 21:04:00.425 -05 000000079 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1205=================== 15-12-21 21:04:00.433 -05 000000051 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204=================== 15-12-21 21:04:00.457 -05 000000044 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1213, Registering and Extracting C029 L002 T1214=================== 15-12-21 21:04:00.457 -05 000000020 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1213, Registering and Extracting C029 L002 T1214=================== 15-12-21 21:04:00.457 -05 000000034 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1213, Registering and Extracting C029 L002 T1214, Registering and Extracting C029 L002 T1215=================== 15-12-21 21:04:00.457 -05 000000082 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1213, Registering and Extracting C029 L002 T1214, Registering and Extracting C029 L002 T1215, Registering and Extracting C029 L002 T1216=================== 15-12-21 21:04:00.530 -05 000000041 INF: ===================Frame #58=================== 15-12-21 21:04:00.600 -05 000000089 INF: ===================Frame #64=================== 15-12-21 21:04:00.758 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:00.759 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 8 of 25 seconds left=================== 15-12-21 21:04:00.879 -05 000000041 INF: ===================Frame #86=================== 15-12-21 21:04:00.969 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:01.004 -05 000000089 INF: ===================Frame #96=================== 15-12-21 21:04:01.031 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.014C:A1\r\n 15-12-21 21:04:01.031 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:01.276 -05 000000041 INF: ===================Frame #117=================== 15-12-21 21:04:01.348 -05 000000089 INF: ===================Frame #123=================== 15-12-21 21:04:01.427 -05 000000041 INF: ===================Frame #129=================== 15-12-21 21:04:01.500 -05 000000089 INF: ===================Frame #135=================== 15-12-21 21:04:01.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:01.583 -05 000000041 INF: ===================Frame #141=================== 15-12-21 21:04:01.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:01.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:01.670 -05 000000089 INF: ===================Frame #148=================== 15-12-21 21:04:01.738 -05 000000041 INF: ===================Frame #154=================== 15-12-21 21:04:01.750 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:01.760 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:01.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 7 of 25 seconds left=================== 15-12-21 21:04:01.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:01.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:01.931 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:01.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:01.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:02.051 -05 000000089 INF: ===================Frame #179=================== 15-12-21 21:04:02.201 -05 000000089 INF: ===================Frame #191=================== 15-12-21 21:04:02.222 -05 000000041 INF: ===================Frame #192=================== 15-12-21 21:04:02.352 -05 000000089 INF: ===================Frame #202=================== 15-12-21 21:04:02.466 -05 000000041 INF: ===================Frame #211=================== 15-12-21 21:04:02.553 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:02.608 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.017C:A1\r\n 15-12-21 21:04:02.608 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:02.617 -05 000000041 INF: ===================Frame #223=================== 15-12-21 21:04:02.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:02.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 6 of 25 seconds left=================== 15-12-21 21:04:02.767 -05 000000041 INF: ===================Frame #235=================== 15-12-21 21:04:02.845 -05 000000089 INF: ===================Frame #241=================== 15-12-21 21:04:02.867 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:02.918 -05 000000041 INF: ===================Frame #247=================== 15-12-21 21:04:02.934 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.725C:A1\r\n 15-12-21 21:04:02.934 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:02.996 -05 000000089 INF: ===================Frame #253=================== 15-12-21 21:04:03.070 -05 000000041 INF: ===================Frame #259=================== 15-12-21 21:04:03.146 -05 000000089 INF: ===================Frame #265=================== 15-12-21 21:04:03.219 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:03.221 -05 000000041 INF: ===================Frame #271=================== 15-12-21 21:04:03.247 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:03.247 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:03.296 -05 000000089 INF: ===================Frame #277=================== 15-12-21 21:04:03.352 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:03.371 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:03.371 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:03.371 -05 000000041 INF: ===================Frame #283=================== 15-12-21 21:04:03.446 -05 000000089 INF: ===================Frame #289=================== 15-12-21 21:04:03.474 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:03.495 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:03.495 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:03.523 -05 000000041 INF: ===================Frame #295=================== 15-12-21 21:04:03.570 -05 000000027 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1213, Registering and Extracting C029 L002 T1214, Registering and Extracting C029 L002 T1215=================== 15-12-21 21:04:03.598 -05 000000089 INF: ===================Frame #301=================== 15-12-21 21:04:03.674 -05 000000041 INF: ===================Frame #307=================== 15-12-21 21:04:03.748 -05 000000089 INF: ===================Frame #313=================== 15-12-21 21:04:03.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:03.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 5 of 25 seconds left=================== 15-12-21 21:04:03.824 -05 000000041 INF: ===================Frame #319=================== 15-12-21 21:04:03.899 -05 000000089 INF: ===================Frame #325=================== 15-12-21 21:04:03.976 -05 000000041 INF: ===================Frame #331=================== 15-12-21 21:04:04.053 -05 000000089 INF: ===================Frame #337=================== 15-12-21 21:04:04.127 -05 000000041 INF: ===================Frame #343=================== 15-12-21 21:04:04.206 -05 000000089 INF: ===================Frame #349=================== 15-12-21 21:04:04.280 -05 000000041 INF: ===================Frame #355=================== 15-12-21 21:04:04.358 -05 000000089 INF: ===================Frame #361=================== 15-12-21 21:04:04.430 -05 000000041 INF: ===================Frame #367=================== 15-12-21 21:04:04.508 -05 000000089 INF: ===================Frame #373=================== 15-12-21 21:04:04.584 -05 000000041 INF: ===================Frame #379=================== 15-12-21 21:04:04.659 -05 000000089 INF: ===================Frame #385=================== 15-12-21 21:04:04.720 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:04.734 -05 000000041 INF: ===================Frame #391=================== 15-12-21 21:04:04.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:04.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:04.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:04.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 4 of 25 seconds left=================== 15-12-21 21:04:04.810 -05 000000089 INF: ===================Frame #397=================== 15-12-21 21:04:04.816 -05 000000072 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1213, Registering and Extracting C029 L002 T1214=================== 15-12-21 21:04:04.834 -05 000000031 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203, Registering and Extracting C029 L002 T1204, Registering and Extracting C029 L002 T1213=================== 15-12-21 21:04:04.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:04.868 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:04.868 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:04.884 -05 000000041 INF: ===================Frame #403=================== 15-12-21 21:04:04.960 -05 000000089 INF: ===================Frame #409=================== 15-12-21 21:04:04.969 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:04.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:04.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:05.034 -05 000000041 INF: ===================Frame #414=================== 15-12-21 21:04:05.112 -05 000000089 INF: ===================Frame #421=================== 15-12-21 21:04:05.263 -05 000000089 INF: ===================Frame #433=================== 15-12-21 21:04:05.406 -05 000000044 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203=================== 15-12-21 21:04:05.406 -05 000000088 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202, Registering and Extracting C029 L002 T1203=================== 15-12-21 21:04:05.413 -05 000000089 INF: ===================Frame #444=================== 15-12-21 21:04:05.457 -05 000000034 INF: ===================Registering and Extracting C029 L002 T1201, Registering and Extracting C029 L002 T1202=================== 15-12-21 21:04:05.493 -05 000000041 INF: ===================Frame #451=================== 15-12-21 21:04:05.623 -05 000000020 INF: ===================Registering and Extracting C029 L002 T1201=================== 15-12-21 21:04:05.633 -05 000000082 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:04:05.644 -05 000000041 INF: ===================Frame #463=================== 15-12-21 21:04:05.687 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:05.693 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:04:05.762 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:05.762 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 3 of 25 seconds left=================== 15-12-21 21:04:05.795 -05 000000041 INF: ===================Frame #475=================== 15-12-21 21:04:05.797 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:05.805 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:04:05.872 -05 000000089 INF: ===================Frame #481=================== 15-12-21 21:04:05.906 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:05.911 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:04:05.945 -05 000000041 INF: ===================Frame #487=================== 15-12-21 21:04:05.991 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:05.999 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:04:06.022 -05 000000089 INF: ===================Frame #493=================== 15-12-21 21:04:06.093 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:06.096 -05 000000041 INF: ===================Frame #498=================== 15-12-21 21:04:06.174 -05 000000089 INF: ===================Frame #505=================== 15-12-21 21:04:06.222 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:06.240 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.054C:A1\r\n 15-12-21 21:04:06.240 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:06.325 -05 000000089 INF: ===================Frame #517=================== 15-12-21 21:04:06.344 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:06.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:06.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:06.418 -05 000000041 INF: ===================Frame #524=================== 15-12-21 21:04:06.470 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:06.475 -05 000000089 INF: ===================Frame #528=================== 15-12-21 21:04:06.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:06.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:06.597 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:06.653 -05 000000041 INF: ===================Frame #542=================== 15-12-21 21:04:06.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:06.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:06.763 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:06.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 2 of 25 seconds left=================== 15-12-21 21:04:06.829 -05 000000089 INF: ===================Frame #556=================== 15-12-21 21:04:06.849 -05 000000041 INF: ===================Frame #558=================== 15-12-21 21:04:07.039 -05 000000089 INF: ===================Frame #573=================== 15-12-21 21:04:07.039 -05 000000041 INF: ===================Frame #573=================== 15-12-21 21:04:07.115 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 21:04:07.190 -05 000000041 INF: ===================Frame #585=================== 15-12-21 21:04:07.190 -05 000000089 INF: ===================Frame #585=================== 15-12-21 21:04:07.340 -05 000000041 INF: ===================Frame #597=================== 15-12-21 21:04:07.340 -05 000000089 INF: ===================Frame #597=================== 15-12-21 21:04:07.491 -05 000000041 INF: ===================Frame #609=================== 15-12-21 21:04:07.491 -05 000000089 INF: ===================Frame #609=================== 15-12-21 21:04:07.641 -05 000000041 INF: ===================Frame #621=================== 15-12-21 21:04:07.642 -05 000000089 INF: ===================Frame #621=================== 15-12-21 21:04:07.745 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:07.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:07.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 1 of 25 seconds left=================== 15-12-21 21:04:07.792 -05 000000089 INF: ===================Frame #633=================== 15-12-21 21:04:07.792 -05 000000041 INF: ===================Frame #633=================== 15-12-21 21:04:07.943 -05 000000041 INF: ===================Frame #644=================== 15-12-21 21:04:07.943 -05 000000089 INF: ===================Frame #644=================== 15-12-21 21:04:08.027 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:08.050 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:08.050 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:08.146 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:08.174 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.285C:A1\r\n 15-12-21 21:04:08.174 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:08.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:08.302 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:08.302 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:08.333 -05 000000041 INF: ===================Frame #675=================== 15-12-21 21:04:08.339 -05 000000089 INF: ===================Frame #676=================== 15-12-21 21:04:08.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:08.426 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:08.426 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:08.485 -05 000000041 INF: ===================Frame #687=================== 15-12-21 21:04:08.526 -05 000000089 INF: ===================Frame #690=================== 15-12-21 21:04:08.636 -05 000000041 INF: ===================Frame #699=================== 15-12-21 21:04:08.645 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:08.645 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:08.645 -05 000000062 INF: WaitCommand(25000) end 15-12-21 21:04:08.645 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:08.647 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:04:08.647 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:08.693 -05 000000089 INF: ===================Frame #704=================== 15-12-21 21:04:08.737 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:08.737 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 21:04:08.737 -05 000000062 INF: Valve B2: Go to position 5 15-12-21 21:04:08.737 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:04:08.786 -05 000000041 INF: ===================Frame #711=================== 15-12-21 21:04:08.799 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 1\r 15-12-21 21:04:08.799 -05 000000062 INF: Valve B2: 42.714 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:04:08.799 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 1 to 5 15-12-21 21:04:08.799 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW5\r 15-12-21 21:04:08.800 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 21:04:08.800 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:04:08.858 -05 000000089 INF: ===================Frame #717=================== 15-12-21 21:04:08.938 -05 000000041 INF: ===================Frame #723=================== 15-12-21 21:04:09.009 -05 000000089 INF: ===================Frame #729=================== 15-12-21 21:04:09.088 -05 000000041 INF: ===================Frame #735=================== 15-12-21 21:04:09.159 -05 000000089 INF: ===================Frame #741=================== 15-12-21 21:04:09.239 -05 000000041 INF: ===================Frame #747=================== 15-12-21 21:04:09.310 -05 000000089 INF: ===================Frame #753=================== 15-12-21 21:04:09.391 -05 000000041 INF: ===================Frame #759=================== 15-12-21 21:04:09.461 -05 000000089 INF: ===================Frame #764=================== 15-12-21 21:04:09.541 -05 000000041 INF: ===================Frame #771=================== 15-12-21 21:04:09.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:09.673 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:09.673 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:09.678 -05 000000089 INF: ===================Frame #782=================== 15-12-21 21:04:09.695 -05 000000041 INF: ===================Frame #783=================== 15-12-21 21:04:09.733 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 21:04:09.733 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:09.733 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 21:04:09.779 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:09.846 -05 000000041 INF: ===================Frame #795=================== 15-12-21 21:04:09.854 -05 000000089 INF: ===================Frame #796=================== 15-12-21 21:04:09.862 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:04:09.862 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:09.963 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:09.986 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:09.986 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:09.996 -05 000000041 INF: ===================Frame #807=================== 15-12-21 21:04:10.020 -05 000000089 INF: ===================Frame #809=================== 15-12-21 21:04:10.092 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:04:10.110 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:04:10.110 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:10.148 -05 000000041 INF: ===================Frame #819=================== 15-12-21 21:04:10.172 -05 000000089 INF: ===================Frame #821=================== 15-12-21 21:04:10.212 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:10.234 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:10.234 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:10.298 -05 000000041 INF: ===================Frame #831=================== 15-12-21 21:04:10.322 -05 000000089 INF: ===================Frame #833=================== 15-12-21 21:04:10.335 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:10.358 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:04:10.358 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:10.448 -05 000000041 INF: ===================Frame #843=================== 15-12-21 21:04:10.459 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:10.459 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 21:04:10.459 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:10.472 -05 000000089 INF: ===================Frame #844=================== 15-12-21 21:04:10.544 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:10.558 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:04:10.599 -05 000000041 INF: ===================Frame #854=================== 15-12-21 21:04:10.644 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:04:10.680 -05 000000089 INF: ===================Frame #861=================== 15-12-21 21:04:10.731 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 21:04:10.731 -05 000000062 INF: Current Position of Pump is: 21120 15-12-21 21:04:10.732 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 21:04:10.831 -05 000000089 INF: ===================Frame #873=================== 15-12-21 21:04:10.833 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P4608R\r 15-12-21 21:04:10.920 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:10.985 -05 000000089 INF: ===================Frame #885=================== 15-12-21 21:04:11.009 -05 000000041 INF: ===================Frame #887=================== 15-12-21 21:04:11.020 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:11.109 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:11.136 -05 000000089 INF: ===================Frame #897=================== 15-12-21 21:04:11.159 -05 000000041 INF: ===================Frame #899=================== 15-12-21 21:04:11.286 -05 000000089 INF: ===================Frame #909=================== 15-12-21 21:04:11.310 -05 000000041 INF: ===================Frame #911=================== 15-12-21 21:04:11.359 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:11.437 -05 000000089 INF: ===================Frame #921=================== 15-12-21 21:04:11.459 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:11.464 -05 000000041 INF: ===================Frame #923=================== 15-12-21 21:04:11.482 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:11.483 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.013C:A1\r\n 15-12-21 21:04:11.483 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:11.589 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:11.592 -05 000000089 INF: ===================Frame #933=================== 15-12-21 21:04:11.609 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:11.609 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:11.614 -05 000000041 INF: ===================Frame #935=================== 15-12-21 21:04:11.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:11.732 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:11.742 -05 000000089 INF: ===================Frame #945=================== 15-12-21 21:04:11.764 -05 000000041 INF: ===================Frame #947=================== 15-12-21 21:04:11.793 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:11.794 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:11.794 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:11.893 -05 000000089 INF: ===================Frame #957=================== 15-12-21 21:04:11.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:11.915 -05 000000041 INF: ===================Frame #958=================== 15-12-21 21:04:11.920 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:11.920 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:12.043 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:12.044 -05 000000089 INF: ===================Frame #969=================== 15-12-21 21:04:12.106 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:12.194 -05 000000089 INF: ===================Frame #981=================== 15-12-21 21:04:12.198 -05 000000041 INF: ===================Frame #981=================== 15-12-21 21:04:12.345 -05 000000089 INF: ===================Frame #992=================== 15-12-21 21:04:12.348 -05 000000041 INF: ===================Frame #993=================== 15-12-21 21:04:12.356 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:12.419 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:12.498 -05 000000041 INF: ===================Frame #1005=================== 15-12-21 21:04:12.648 -05 000000041 INF: ===================Frame #1016=================== 15-12-21 21:04:12.669 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:12.693 -05 000000089 INF: ===================Frame #1020=================== 15-12-21 21:04:12.729 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:12.880 -05 000000041 INF: ===================Frame #1035=================== 15-12-21 21:04:12.892 -05 000000089 INF: ===================Frame #1036=================== 15-12-21 21:04:12.902 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:12.919 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 21:04:12.919 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:12.979 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:13.032 -05 000000041 INF: ===================Frame #1047=================== 15-12-21 21:04:13.043 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:13.043 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 21:04:13.065 -05 000000089 INF: ===================Frame #1049=================== 15-12-21 21:04:13.144 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:04:13.182 -05 000000041 INF: ===================Frame #1059=================== 15-12-21 21:04:13.213 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:13.215 -05 000000089 INF: ===================Frame #1061=================== 15-12-21 21:04:13.229 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 21:04:13.229 -05 000000062 INF: Current Position of Pump is: 25728 15-12-21 21:04:13.229 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:04:13.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:13.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:13.329 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:04:13.332 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:13.333 -05 000000041 INF: ===================Frame #1070=================== 15-12-21 21:04:13.354 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.983C:A1\r\n 15-12-21 21:04:13.354 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:13.366 -05 000000089 INF: ===================Frame #1073=================== 15-12-21 21:04:13.415 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:13.465 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:13.481 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:13.481 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:13.515 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:13.517 -05 000000089 INF: ===================Frame #1085=================== 15-12-21 21:04:13.542 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:13.569 -05 000000041 INF: ===================Frame #1089=================== 15-12-21 21:04:13.589 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:13.667 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:13.667 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:13.668 -05 000000089 INF: ===================Frame #1097=================== 15-12-21 21:04:13.720 -05 000000041 INF: ===================Frame #1101=================== 15-12-21 21:04:13.792 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:13.819 -05 000000089 INF: ===================Frame #1109=================== 15-12-21 21:04:13.852 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:13.852 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:13.853 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 21:04:13.853 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:13.871 -05 000000041 INF: ===================Frame #1113=================== 15-12-21 21:04:13.919 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:04:13.919 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:13.969 -05 000000089 INF: ===================Frame #1121=================== 15-12-21 21:04:14.022 -05 000000041 INF: ===================Frame #1125=================== 15-12-21 21:04:14.026 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:04:14.040 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:04:14.040 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:14.121 -05 000000089 INF: ===================Frame #1133=================== 15-12-21 21:04:14.150 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:14.167 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:04:14.167 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:14.173 -05 000000041 INF: ===================Frame #1137=================== 15-12-21 21:04:14.272 -05 000000089 INF: ===================Frame #1145=================== 15-12-21 21:04:14.276 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:14.277 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:14.278 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:14.278 -05 000000062 INF: WaitCommand(5000) start 15-12-21 21:04:14.278 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 21:04:14.324 -05 000000041 INF: ===================Frame #1149=================== 15-12-21 21:04:14.423 -05 000000089 INF: ===================Frame #1157=================== 15-12-21 21:04:14.474 -05 000000041 INF: ===================Frame #1161=================== 15-12-21 21:04:14.574 -05 000000089 INF: ===================Frame #1169=================== 15-12-21 21:04:14.624 -05 000000041 INF: ===================Frame #1173=================== 15-12-21 21:04:14.724 -05 000000089 INF: ===================Frame #1180=================== 15-12-21 21:04:14.775 -05 000000041 INF: ===================Frame #1185=================== 15-12-21 21:04:14.927 -05 000000041 INF: ===================Frame #1197=================== 15-12-21 21:04:14.959 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:14.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:14.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:15.062 -05 000000089 INF: ===================Frame #1207=================== 15-12-21 21:04:15.078 -05 000000041 INF: ===================Frame #1209=================== 15-12-21 21:04:15.079 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:15.102 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:15.102 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:15.207 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:15.213 -05 000000089 INF: ===================Frame #1219=================== 15-12-21 21:04:15.229 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:15.229 -05 000000041 INF: ===================Frame #1220=================== 15-12-21 21:04:15.229 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:15.284 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:15.284 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 21:04:15.363 -05 000000089 INF: ===================Frame #1231=================== 15-12-21 21:04:15.513 -05 000000089 INF: ===================Frame #1243=================== 15-12-21 21:04:15.567 -05 000000041 INF: ===================Frame #1247=================== 15-12-21 21:04:15.661 -05 000000060 INF: FPGA: Recv TDIYWAIT 15-12-21 21:04:15.663 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:04:15.664 -05 000000089 INF: ===================Frame #1250=================== 15-12-21 21:04:15.674 -05 000000061 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:04:15.676 -05 000000029 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:04:15.676 -05 000000040 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:04:15.680 -05 000000029 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:04:15.682 -05 000000029 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:04:15.682 -05 000000029 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:04:15.682 -05 000000040 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:04:15.683 -05 000000040 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:04:15.683 -05 000000040 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:04:15.683 -05 000000029 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:04:15.685 -05 000000040 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:04:15.718 -05 000000041 INF: ===================Frame #1250=================== 15-12-21 21:04:15.785 -05 000000041 INF: Camera complete - got 1250 frames. 15-12-21 21:04:15.787 -05 000000041 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:04:15.800 -05 000000089 INF: Camera complete - got 1250 frames. 15-12-21 21:04:15.801 -05 000000089 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:04:15.848 -05 000000092 INF: FPGA: Recv EX1MV 15-12-21 21:04:15.848 -05 000000029 INF: Excitation Filter 1: Moved 36 steps in 165.6138 ms 15-12-21 21:04:15.848 -05 000000029 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 165.7853 ms 15-12-21 21:04:15.848 -05 000000029 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 168.5468 ms 15-12-21 21:04:15.849 -05 000000029 INF: ====================================== 15-12-21 21:04:16.099 -05 000000092 INF: FPGA: Recv EX2MV 15-12-21 21:04:16.099 -05 000000040 INF: Excitation Filter 2: Moved 107 steps in 416.4735 ms 15-12-21 21:04:16.099 -05 000000040 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 416.6151 ms 15-12-21 21:04:16.101 -05 000000040 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 418.7693 ms 15-12-21 21:04:16.102 -05 000000040 INF: ====================================== 15-12-21 21:04:16.104 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:04:16.112 -05 000000061 INF: ====================================== 15-12-21 21:04:16.135 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 21:04:16.166 -05 000000041 INF: ====================================== 15-12-21 21:04:16.257 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 21:04:16.280 -05 000000089 INF: ====================================== 15-12-21 21:04:16.284 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:16.284 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:04:16.284 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 21:04:16.291 -05 000000078 INF: ====================================== 15-12-21 21:04:16.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:16.476 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:16.476 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:16.477 -05 000000090 INF: Y Motor: Moved to 9.0764 after 16956 ms 15-12-21 21:04:16.478 -05 000000090 INF: ====================================== 15-12-21 21:04:16.479 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:16.480 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:16.488 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:16.488 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:04:16.546 -05 000000092 INF: FPGA: Recv TDICLINES 9392 15-12-21 21:04:16.546 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:04:16.600 -05 000000055 INF: FPGA: Recv TDIYERD 907645 15-12-21 21:04:16.600 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 21:04:16.653 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:16.659 -05 000000089 INF: FPGA: Recv ZADCR 24244 15-12-21 21:04:16.659 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.092. Y moved -60.304 mm 15-12-21 21:04:16.659 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:04:16.745 -05 000000055 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:04:16.745 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:04:16.746 -05 000000057 INF: TDIScan finished after 22424.7727 ms 15-12-21 21:04:16.746 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:04:16.746 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:04:16.748 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.977C:A1\r\n 15-12-21 21:04:16.748 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:16.750 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:16.778 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.153 um 15-12-21 21:04:16.778 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:16.783 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:16.787 -05 000000023 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:04:16.788 -05 000000089 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:04:16.788 -05 000000092 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:04:16.788 -05 000000089 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:04:16.788 -05 000000061 INF: ===================Dither Clean Up Command=================== 15-12-21 21:04:16.789 -05 000000060 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:04:16.791 -05 000000038 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:04:16.793 -05 000000023 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:04:16.793 -05 000000023 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:04:16.845 -05 000000060 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:04:16.863 -05 000000040 INF: FPGA: Recv ZSTEP 15-12-21 21:04:16.926 -05 000000040 INF: FPGA: Recv ZSEL 15-12-21 21:04:16.940 -05 000000060 INF: FPGA: Xmit ZDACW 29061\n 15-12-21 21:04:16.940 -05 000000038 INF: ===================LFT:Extracting coords=================== 15-12-21 21:04:16.952 -05 000000089 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:04:17.032 -05 000000078 INF: FPGA: Recv ZDACW 15-12-21 21:04:17.048 -05 000000023 INF: ====================================== 15-12-21 21:04:17.049 -05 000000060 INF: ====================================== 15-12-21 21:04:17.050 -05 000000089 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:04:17.050 -05 000000092 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:04:17.050 -05 000000089 INF: ====================================== 15-12-21 21:04:17.126 -05 000000092 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:04:17.163 -05 000000092 INF: ====================================== 15-12-21 21:04:17.199 -05 000000038 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:04:17.201 -05 000000038 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:04:17.202 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:17.202 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:17.203 -05 000000086 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:04:17.203 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:17.203 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:04:17.203 -05 000000060 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:17.203 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:04:17.203 -05 000000060 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:04:17.207 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:17.240 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:17.240 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:17.314 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:17.315 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 21:04:17.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:17.401 -05 000000086 INF: LFT found best fwhm score 2.509552 in 153 ms 15-12-21 21:04:17.401 -05 000000086 INF: LFT found good score at index 6437 with fwhm value 2.509552. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:1,B 15-12-21 21:04:17.401 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:17.402 -05 000000086 INF: ====================================== 15-12-21 21:04:17.421 -05 000000055 INF: LFT found best fwhm score 2.441245 in 174 ms 15-12-21 21:04:17.421 -05 000000055 INF: LFT found good score at index 8029 with fwhm value 2.441245. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:1,B 15-12-21 21:04:17.422 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:17.422 -05 000000055 INF: ====================================== 15-12-21 21:04:17.428 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:17.428 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:17.428 -05 000000060 INF: LFT found best fwhm score 2.61164 in 180 ms 15-12-21 21:04:17.428 -05 000000060 INF: LFT found good score at index 6497 with fwhm value 2.61164. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:1,B 15-12-21 21:04:17.428 -05 000000060 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:17.429 -05 000000060 INF: ====================================== 15-12-21 21:04:17.445 -05 000000056 INF: LFT found best fwhm score 2.48023 in 198 ms 15-12-21 21:04:17.445 -05 000000056 INF: LFT found good score at index 5449 with fwhm value 2.48023. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:1,B 15-12-21 21:04:17.445 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:17.446 -05 000000056 INF: ====================================== 15-12-21 21:04:17.448 -05 000000038 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:04:17.451 -05 000000038 INF: LFT weighted average best Z for bottom surface is at -0.091mm FC:A, C:29,L:1,B 15-12-21 21:04:17.451 -05 000000038 INF: ====================================== 15-12-21 21:04:17.455 -05 000000061 INF: ====================================== 15-12-21 21:04:17.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:17.459 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:04:17.459 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:17.459 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:04:17.459 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:17.460 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:04:17.460 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:17.460 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:04:17.460 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:17.461 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:04:17.463 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:04:17.464 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:04:17.464 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 21:04:17.464 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left, Waiting for image analysis=================== 15-12-21 21:04:17.465 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 21:04:17.465 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:04:17.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:04:17.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:04:17.466 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:17.466 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:04:17.466 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:04:17.467 -05 000000082 INF: ===================Registering and Extracting C029 L001 T2101=================== 15-12-21 21:04:17.467 -05 000000034 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102=================== 15-12-21 21:04:17.467 -05 000000020 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103=================== 15-12-21 21:04:17.469 -05 000000031 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106=================== 15-12-21 21:04:17.469 -05 000000027 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107, Registering and Extracting C029 L001 T2108=================== 15-12-21 21:04:17.470 -05 000000044 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104=================== 15-12-21 21:04:17.471 -05 000000088 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107=================== 15-12-21 21:04:17.489 -05 000000072 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105=================== 15-12-21 21:04:17.501 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:17.501 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:04:17.501 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:17.501 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -110.9 um, section = A_1 15-12-21 21:04:17.504 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:04:17.506 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:04:17.507 -05 000000037 INF: ===================MoveEmissionFilters=================== 15-12-21 21:04:17.507 -05 000000023 INF: ===================Move X,Y=================== 15-12-21 21:04:17.507 -05 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:04:17.509 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:04:17.509 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:04:17.509 -05 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:04:17.509 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:04:17.509 -05 000000041 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:04:17.510 -05 000000055 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:04:17.515 -05 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:04:17.515 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:04:17.515 -05 000000023 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:04:17.515 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:04:17.515 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:04:17.516 -05 000000041 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:04:17.517 -05 000000038 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:04:17.518 -05 000000061 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:04:17.518 -05 000000060 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:04:17.518 -05 000000038 INF: ====================================== 15-12-21 21:04:17.518 -05 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:04:17.518 -05 000000061 INF: ====================================== 15-12-21 21:04:17.519 -05 000000060 INF: ====================================== 15-12-21 21:04:17.519 -05 000000056 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:04:17.519 -05 000000045 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:04:17.520 -05 000000056 INF: ====================================== 15-12-21 21:04:17.520 -05 000000045 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:04:17.520 -05 000000045 INF: ====================================== 15-12-21 21:04:17.522 -05 000000089 INF: ===================Move X Motor without settling=================== 15-12-21 21:04:17.522 -05 000000038 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:04:17.522 -05 000000089 INF: X Motor: Xmit PR VM\n 15-12-21 21:04:17.522 -05 000000078 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:04:17.524 -05 000000045 INF: ===================TDI Scan Setup=================== 15-12-21 21:04:17.524 -05 000000056 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:04:17.525 -05 000000038 INF: ====================================== 15-12-21 21:04:17.525 -05 000000092 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:04:17.526 -05 000000078 INF: ====================================== 15-12-21 21:04:17.527 -05 000000056 INF: ====================================== 15-12-21 21:04:17.527 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:17.538 -05 000000061 INF: ===================Move Y Motor without settling=================== 15-12-21 21:04:17.538 -05 000000092 INF: ====================================== 15-12-21 21:04:17.538 -05 000000061 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 21:04:17.539 -05 000000061 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:04:17.539 -05 000000060 INF: ===================Camera Arm TDI=================== 15-12-21 21:04:17.540 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:04:17.540 -05 000000061 INF: Y Motor: Xmit 1G\n 15-12-21 21:04:17.540 -05 000000045 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:04:17.547 -05 000000041 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:04:17.549 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:04:17.550 -05 000000089 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:04:17.562 -05 000000089 INF: X Motor: Xmit PR VI\n 15-12-21 21:04:17.563 -05 000000045 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:04:17.563 -05 000000041 INF: ====================================== 15-12-21 21:04:17.610 -05 000000045 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:04:17.610 -05 000000029 INF: ====================================== 15-12-21 21:04:17.610 -05 000000086 INF: ====================================== 15-12-21 21:04:17.612 -05 000000037 INF: ====================================== 15-12-21 21:04:17.613 -05 000000061 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:04:17.614 -05 000000089 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:04:17.614 -05 000000089 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:04:17.614 -05 000000089 INF: X Motor: Moving to 13.6440 mm @15.000 mm/sec, started at 12.8696 mm 15-12-21 21:04:17.614 -05 000000061 INF: Y Motor: Recv 1G\r\n 15-12-21 21:04:17.614 -05 000000089 INF: X Motor: Xmit MA -18578\n 15-12-21 21:04:17.615 -05 000000061 INF: Y Motor: Xmit 1D\n 15-12-21 21:04:17.675 -05 000000038 INF: FPGA: Recv ZSEL 15-12-21 21:04:17.676 -05 000000061 INF: Y Motor: Recv 1D\r\n 15-12-21 21:04:17.676 -05 000000045 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:04:17.677 -05 000000061 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:04:17.677 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:17.678 -05 000000089 INF: X Motor: Recv MA -18578\r\n> 15-12-21 21:04:17.679 -05 000000089 INF: X Motor: WaitUntilStopped 60052 15-12-21 21:04:17.680 -05 000000061 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:04:17.681 -05 000000045 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:04:17.681 -05 000000045 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:04:17.681 -05 000000045 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:04:17.736 -05 000000056 INF: FPGA: Recv ZSTEP 15-12-21 21:04:17.738 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:17.741 -05 000000045 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:04:17.742 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:17.954 -05 000000045 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:04:17.955 -05 000000045 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:04:17.955 -05 000000045 INF: Z Motor: Arming to move to -0.0709 mm 15-12-21 21:04:17.955 -05 000000045 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:04:18.067 -05 000000078 INF: FPGA: Recv ZYT 15-12-21 21:04:18.068 -05 000000045 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907643 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:04:18.068 -05 000000045 INF: FPGA: Xmit ZARM 18575\n 15-12-21 21:04:18.068 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:18.132 -05 000000038 INF: FPGA: Recv ZARM 15-12-21 21:04:18.132 -05 000000045 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.4918 ms 15-12-21 21:04:18.132 -05 000000045 INF: Z Motor: ArmAbsStepped took 177.5553 ms 15-12-21 21:04:18.134 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 21:04:18.134 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:18.134 -05 000000045 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:18.136 -05 000000089 INF: X Motor: Xmit PR ER\n 15-12-21 21:04:18.138 -05 000000045 INF: ===================TDI Scan Setup=================== 15-12-21 21:04:18.156 -05 000000045 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:04:18.157 -05 000000045 INF: ===================TDI Scan Setup=================== 15-12-21 21:04:18.217 -05 000000045 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:04:18.320 -05 000000089 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:04:18.320 -05 000000089 INF: X Motor: Moved to 13.6436 after 641 ms 15-12-21 21:04:18.320 -05 000000045 INF: ===================TDI Scan Setup=================== 15-12-21 21:04:18.320 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:18.321 -05 000000089 INF: ====================================== 15-12-21 21:04:18.321 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 21:04:18.329 -05 000000045 INF: ====================================== 15-12-21 21:04:18.480 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:18.545 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.788C:A1\r\n 15-12-21 21:04:18.545 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:18.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:19.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:19.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:19.128 -05 000000060 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:04:19.129 -05 000000060 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:04:19.129 -05 000000060 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:04:19.179 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:19.210 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:19.210 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:19.280 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:19.280 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:19.325 -05 000000062 INF: WaitCommand(5000) end 15-12-21 21:04:19.325 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:19.327 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:19.328 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:19.329 -05 000000045 INF: ===================WaitCommand=================== 15-12-21 21:04:19.360 -05 000000056 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:04:19.360 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:19.362 -05 000000045 INF: WaitCommand(15000) start 15-12-21 21:04:19.373 -05 000000045 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 21:04:19.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:19.407 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:19.470 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:19.470 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:19.507 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:19.593 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:19.693 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:04:19.817 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 21:04:19.817 -05 000000056 INF: Current Position of Pump is: 25728 15-12-21 21:04:19.817 -05 000000056 INF: Dispense Steps 48000 is greater than steps to home syringe 25728, reducing number of steps to 25728 15-12-21 21:04:19.817 -05 000000056 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:04:19.917 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD25728R\r 15-12-21 21:04:19.966 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:20.102 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:20.163 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:20.379 -05 000000045 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 21:04:20.413 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:20.467 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:20.717 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:20.763 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:20.780 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:20.781 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:20.781 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:20.892 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:20.907 -05 000000060 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:04:20.907 -05 000000060 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:04:20.907 -05 000000060 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:04:20.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:20.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:20.909 -05 000000060 INF: ====================================== 15-12-21 21:04:20.912 -05 000000055 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:04:20.921 -05 000000055 INF: ====================================== 15-12-21 21:04:21.020 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:21.030 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:21.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:21.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:21.090 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:21.340 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:21.379 -05 000000045 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 21:04:21.391 -05 000000061 INF: Y Motor: Moved to 70.6885 after 3710 ms 15-12-21 21:04:21.391 -05 000000061 INF: ====================================== 15-12-21 21:04:21.393 -05 000000023 INF: ===================Move X,Y=================== 15-12-21 21:04:21.399 -05 000000023 INF: ====================================== 15-12-21 21:04:21.401 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:04:21.405 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:21.409 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:21.409 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:04:21.453 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:04:21.454 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:04:21.513 -05 000000092 INF: FPGA: Recv ZFREQCL 15-12-21 21:04:21.513 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:04:21.514 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:21.514 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:04:21.575 -05 000000092 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:04:21.576 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:04:21.576 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:04:21.581 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:04:21.586 -05 000000078 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:04:21.587 -05 000000084 INF: ===================TDI FPGA Arm=================== 15-12-21 21:04:21.587 -05 000000078 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:04:21.591 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:04:21.596 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:04:21.596 -05 000000084 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:04:21.637 -05 000000089 INF: FPGA: Recv TDIYPOS 15-12-21 21:04:21.637 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:04:21.638 -05 000000078 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:04:21.639 -05 000000078 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:04:21.639 -05 000000078 INF: ====================================== 15-12-21 21:04:21.644 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:04:21.647 -05 000000084 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:04:21.656 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:21.701 -05 000000078 INF: FPGA: Recv TDIYARM3 15-12-21 21:04:21.702 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:04:21.707 -05 000000084 INF: ===================TDI FPGA Arm=================== 15-12-21 21:04:21.717 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:21.717 -05 000000084 INF: ====================================== 15-12-21 21:04:21.723 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:04:21.724 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:21.724 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:21.725 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:21.733 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:21.734 -05 000000060 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:04:21.734 -05 000000037 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:04:21.735 -05 000000060 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:04:21.735 -05 000000060 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:04:21.735 -05 000000060 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:04:21.735 -05 000000060 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:04:21.738 -05 000000037 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:04:21.738 -05 000000037 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:04:21.738 -05 000000037 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:04:21.742 -05 000000037 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:04:21.886 -05 000000023 INF: FPGA: Recv EX1MV 15-12-21 21:04:21.886 -05 000000060 INF: Excitation Filter 1: Moved -36 steps in 151.0567 ms 15-12-21 21:04:21.886 -05 000000060 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 151.177 ms 15-12-21 21:04:21.886 -05 000000060 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 151.261 ms 15-12-21 21:04:21.886 -05 000000060 INF: ====================================== 15-12-21 21:04:21.967 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:22.028 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:22.135 -05 000000084 INF: FPGA: Recv EX2MV 15-12-21 21:04:22.135 -05 000000037 INF: Excitation Filter 2: Moved -107 steps in 396.6897 ms 15-12-21 21:04:22.135 -05 000000037 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 396.8281 ms 15-12-21 21:04:22.135 -05 000000037 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 396.9571 ms 15-12-21 21:04:22.136 -05 000000037 INF: ====================================== 15-12-21 21:04:22.140 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:22.180 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:22.209 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:04:22.214 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 21:04:22.215 -05 000000038 INF: ===================Move Y Motor without settling=================== 15-12-21 21:04:22.219 -05 000000029 INF: ===================FPGA Z Wait=================== 15-12-21 21:04:22.219 -05 000000061 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:04:22.220 -05 000000037 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:04:22.221 -05 000000029 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:04:22.221 -05 000000038 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:04:22.222 -05 000000038 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:04:22.222 -05 000000061 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:04:22.222 -05 000000038 INF: Y Motor: Xmit 1G\n 15-12-21 21:04:22.224 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 21:04:22.224 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 21:04:22.262 -05 000000038 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:04:22.263 -05 000000038 INF: Y Motor: Recv 1G\r\n 15-12-21 21:04:22.264 -05 000000038 INF: Y Motor: Xmit 1D\n 15-12-21 21:04:22.278 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:22.308 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:22.323 -05 000000038 INF: Y Motor: Recv 1D\r\n 15-12-21 21:04:22.324 -05 000000038 INF: Y Motor: Recv *407662\r\n 15-12-21 21:04:22.325 -05 000000038 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:04:22.348 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:22.349 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.979C:A1\r\n 15-12-21 21:04:22.349 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:22.412 -05 000000045 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 21:04:22.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:22.541 -05 000000084 INF: FPGA: Recv ZWAIT 15-12-21 21:04:22.543 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:22.543 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:22.543 -05 000000029 INF: ====================================== 15-12-21 21:04:22.608 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:22.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:22.678 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:22.712 -05 000000023 INF: ===================Frame #3=================== 15-12-21 21:04:22.712 -05 000000089 INF: ===================Frame #3=================== 15-12-21 21:04:22.741 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:22.741 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:22.871 -05 000000089 INF: ===================Frame #16=================== 15-12-21 21:04:22.871 -05 000000023 INF: ===================Frame #16=================== 15-12-21 21:04:22.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:22.969 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:22.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:22.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:23.026 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:23.072 -05 000000020 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107=================== 15-12-21 21:04:23.171 -05 000000051 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107, Registering and Extracting C029 L001 T2109=================== 15-12-21 21:04:23.239 -05 000000023 INF: ===================Frame #45=================== 15-12-21 21:04:23.239 -05 000000089 INF: ===================Frame #45=================== 15-12-21 21:04:23.276 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:23.342 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:23.389 -05 000000089 INF: ===================Frame #57=================== 15-12-21 21:04:23.389 -05 000000023 INF: ===================Frame #57=================== 15-12-21 21:04:23.412 -05 000000045 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 21:04:23.482 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:23.528 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 21:04:23.528 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:23.540 -05 000000089 INF: ===================Frame #69=================== 15-12-21 21:04:23.541 -05 000000023 INF: ===================Frame #69=================== 15-12-21 21:04:23.560 -05 000000044 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107=================== 15-12-21 21:04:23.571 -05 000000048 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107, Registering and Extracting C029 L001 T2110=================== 15-12-21 21:04:23.592 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:23.616 -05 000000082 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107=================== 15-12-21 21:04:23.651 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:23.651 -05 000000056 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:04:23.652 -05 000000056 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 21:04:23.672 -05 000000009 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107, Registering and Extracting C029 L001 T2111=================== 15-12-21 21:04:23.691 -05 000000089 INF: ===================Frame #81=================== 15-12-21 21:04:23.692 -05 000000023 INF: ===================Frame #81=================== 15-12-21 21:04:23.751 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:04:23.763 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:23.845 -05 000000023 INF: ===================Frame #93=================== 15-12-21 21:04:23.845 -05 000000089 INF: ===================Frame #93=================== 15-12-21 21:04:23.846 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:23.846 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.918C:A1\r\n 15-12-21 21:04:23.846 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:23.946 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:23.995 -05 000000023 INF: ===================Frame #105=================== 15-12-21 21:04:23.996 -05 000000089 INF: ===================Frame #105=================== 15-12-21 21:04:24.027 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:24.080 -05 000000031 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2107=================== 15-12-21 21:04:24.142 -05 000000034 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106=================== 15-12-21 21:04:24.147 -05 000000023 INF: ===================Frame #117=================== 15-12-21 21:04:24.147 -05 000000089 INF: ===================Frame #117=================== 15-12-21 21:04:24.171 -05 000000028 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2112=================== 15-12-21 21:04:24.171 -05 000000063 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2112, Registering and Extracting C029 L001 T2113=================== 15-12-21 21:04:24.177 -05 000000072 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2112=================== 15-12-21 21:04:24.267 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:24.272 -05 000000068 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2112, Registering and Extracting C029 L001 T2114=================== 15-12-21 21:04:24.291 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:24.298 -05 000000089 INF: ===================Frame #128=================== 15-12-21 21:04:24.298 -05 000000023 INF: ===================Frame #128=================== 15-12-21 21:04:24.344 -05 000000056 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:24.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:24.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:24.345 -05 000000056 INF: ====================================== 15-12-21 21:04:24.412 -05 000000045 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 21:04:24.451 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:24.471 -05 000000027 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106=================== 15-12-21 21:04:24.471 -05 000000088 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106=================== 15-12-21 21:04:24.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:24.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:24.573 -05 000000054 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2115, Registering and Extracting C029 L001 T2116=================== 15-12-21 21:04:24.573 -05 000000079 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2115, Registering and Extracting C029 L001 T2116=================== 15-12-21 21:04:24.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:24.666 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:24.666 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:25.236 -05 000000089 INF: ===================Frame #203=================== 15-12-21 21:04:25.238 -05 000000023 INF: ===================Frame #203=================== 15-12-21 21:04:25.387 -05 000000089 INF: ===================Frame #215=================== 15-12-21 21:04:25.388 -05 000000023 INF: ===================Frame #215=================== 15-12-21 21:04:25.412 -05 000000045 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 21:04:25.538 -05 000000023 INF: ===================Frame #227=================== 15-12-21 21:04:25.538 -05 000000089 INF: ===================Frame #226=================== 15-12-21 21:04:25.690 -05 000000023 INF: ===================Frame #239=================== 15-12-21 21:04:25.841 -05 000000023 INF: ===================Frame #250=================== 15-12-21 21:04:25.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:25.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:25.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:26.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:26.212 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:26.212 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:26.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:26.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:26.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:26.412 -05 000000045 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 21:04:26.460 -05 000000089 INF: ===================Frame #299=================== 15-12-21 21:04:26.611 -05 000000089 INF: ===================Frame #311=================== 15-12-21 21:04:26.742 -05 000000023 INF: ===================Frame #322=================== 15-12-21 21:04:26.761 -05 000000089 INF: ===================Frame #323=================== 15-12-21 21:04:26.912 -05 000000089 INF: ===================Frame #335=================== 15-12-21 21:04:27.048 -05 000000023 INF: ===================Frame #346=================== 15-12-21 21:04:27.065 -05 000000089 INF: ===================Frame #347=================== 15-12-21 21:04:27.101 -05 000000051 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106, Registering and Extracting C029 L001 T2115=================== 15-12-21 21:04:27.218 -05 000000089 INF: ===================Frame #359=================== 15-12-21 21:04:27.254 -05 000000023 INF: ===================Frame #362=================== 15-12-21 21:04:27.369 -05 000000089 INF: ===================Frame #371=================== 15-12-21 21:04:27.413 -05 000000045 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 21:04:27.440 -05 000000023 INF: ===================Frame #377=================== 15-12-21 21:04:27.520 -05 000000089 INF: ===================Frame #383=================== 15-12-21 21:04:27.590 -05 000000023 INF: ===================Frame #389=================== 15-12-21 21:04:27.634 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:27.660 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.009C:A1\r\n 15-12-21 21:04:27.660 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:27.671 -05 000000089 INF: ===================Frame #395=================== 15-12-21 21:04:27.741 -05 000000023 INF: ===================Frame #401=================== 15-12-21 21:04:27.761 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:27.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:27.784 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:27.822 -05 000000089 INF: ===================Frame #407=================== 15-12-21 21:04:27.885 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:27.892 -05 000000023 INF: ===================Frame #413=================== 15-12-21 21:04:27.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:27.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:27.973 -05 000000089 INF: ===================Frame #419=================== 15-12-21 21:04:28.016 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:28.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:28.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:28.043 -05 000000023 INF: ===================Frame #425=================== 15-12-21 21:04:28.130 -05 000000089 INF: ===================Frame #431=================== 15-12-21 21:04:28.195 -05 000000023 INF: ===================Frame #437=================== 15-12-21 21:04:28.200 -05 000000048 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105, Registering and Extracting C029 L001 T2106=================== 15-12-21 21:04:28.263 -05 000000009 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104, Registering and Extracting C029 L001 T2105=================== 15-12-21 21:04:28.281 -05 000000089 INF: ===================Frame #443=================== 15-12-21 21:04:28.346 -05 000000023 INF: ===================Frame #448=================== 15-12-21 21:04:28.414 -05 000000045 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 21:04:28.436 -05 000000089 INF: ===================Frame #456=================== 15-12-21 21:04:28.628 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:28.660 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 21:04:28.662 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:28.823 -05 000000023 INF: ===================Frame #486=================== 15-12-21 21:04:28.959 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:29.032 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.020C:A1\r\n 15-12-21 21:04:29.032 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:29.055 -05 000000023 INF: ===================Frame #505=================== 15-12-21 21:04:29.119 -05 000000089 INF: ===================Frame #510=================== 15-12-21 21:04:29.206 -05 000000023 INF: ===================Frame #517=================== 15-12-21 21:04:29.323 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:29.345 -05 000000089 INF: ===================Frame #528=================== 15-12-21 21:04:29.346 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:29.346 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:29.357 -05 000000023 INF: ===================Frame #529=================== 15-12-21 21:04:29.414 -05 000000045 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 21:04:29.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:29.470 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:29.470 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:29.507 -05 000000023 INF: ===================Frame #540=================== 15-12-21 21:04:29.518 -05 000000089 INF: ===================Frame #541=================== 15-12-21 21:04:29.558 -05 000000028 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103, Registering and Extracting C029 L001 T2104=================== 15-12-21 21:04:29.574 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:29.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:29.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:29.631 -05 000000063 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102, Registering and Extracting C029 L001 T2103=================== 15-12-21 21:04:29.640 -05 000000068 INF: ===================Registering and Extracting C029 L001 T2101, Registering and Extracting C029 L001 T2102=================== 15-12-21 21:04:29.669 -05 000000089 INF: ===================Frame #553=================== 15-12-21 21:04:29.753 -05 000000054 INF: ===================Registering and Extracting C029 L001 T2101=================== 15-12-21 21:04:29.776 -05 000000079 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:04:29.781 -05 000000023 INF: ===================Frame #562=================== 15-12-21 21:04:29.790 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:29.800 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:04:29.819 -05 000000089 INF: ===================Frame #565=================== 15-12-21 21:04:29.896 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:29.904 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:04:29.969 -05 000000089 INF: ===================Frame #577=================== 15-12-21 21:04:29.970 -05 000000023 INF: ===================Frame #577=================== 15-12-21 21:04:30.000 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:30.006 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:04:30.106 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:30.112 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:04:30.120 -05 000000023 INF: ===================Frame #589=================== 15-12-21 21:04:30.120 -05 000000089 INF: ===================Frame #589=================== 15-12-21 21:04:30.209 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:30.270 -05 000000023 INF: ===================Frame #601=================== 15-12-21 21:04:30.273 -05 000000089 INF: ===================Frame #601=================== 15-12-21 21:04:30.414 -05 000000045 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 21:04:30.421 -05 000000023 INF: ===================Frame #613=================== 15-12-21 21:04:30.423 -05 000000089 INF: ===================Frame #613=================== 15-12-21 21:04:30.572 -05 000000023 INF: ===================Frame #624=================== 15-12-21 21:04:30.573 -05 000000089 INF: ===================Frame #625=================== 15-12-21 21:04:30.724 -05 000000089 INF: ===================Frame #637=================== 15-12-21 21:04:30.820 -05 000000023 INF: ===================Frame #644=================== 15-12-21 21:04:30.875 -05 000000089 INF: ===================Frame #648=================== 15-12-21 21:04:30.886 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:30.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:30.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:31.007 -05 000000023 INF: ===================Frame #659=================== 15-12-21 21:04:31.011 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:31.031 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:31.031 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:31.117 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 21:04:31.139 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:31.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:31.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:31.158 -05 000000023 INF: ===================Frame #671=================== 15-12-21 21:04:31.281 -05 000000089 INF: ===================Frame #681=================== 15-12-21 21:04:31.308 -05 000000023 INF: ===================Frame #683=================== 15-12-21 21:04:31.415 -05 000000045 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 21:04:31.431 -05 000000089 INF: ===================Frame #693=================== 15-12-21 21:04:31.460 -05 000000023 INF: ===================Frame #695=================== 15-12-21 21:04:31.582 -05 000000089 INF: ===================Frame #704=================== 15-12-21 21:04:31.610 -05 000000023 INF: ===================Frame #707=================== 15-12-21 21:04:31.760 -05 000000023 INF: ===================Frame #718=================== 15-12-21 21:04:31.817 -05 000000089 INF: ===================Frame #723=================== 15-12-21 21:04:31.968 -05 000000089 INF: ===================Frame #735=================== 15-12-21 21:04:31.994 -05 000000023 INF: ===================Frame #737=================== 15-12-21 21:04:32.118 -05 000000089 INF: ===================Frame #747=================== 15-12-21 21:04:32.144 -05 000000023 INF: ===================Frame #749=================== 15-12-21 21:04:32.270 -05 000000089 INF: ===================Frame #759=================== 15-12-21 21:04:32.295 -05 000000023 INF: ===================Frame #761=================== 15-12-21 21:04:32.381 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:32.404 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:32.404 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:32.417 -05 000000045 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 21:04:32.420 -05 000000089 INF: ===================Frame #771=================== 15-12-21 21:04:32.446 -05 000000023 INF: ===================Frame #773=================== 15-12-21 21:04:32.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:32.571 -05 000000089 INF: ===================Frame #782=================== 15-12-21 21:04:32.592 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:32.592 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:32.597 -05 000000023 INF: ===================Frame #785=================== 15-12-21 21:04:32.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:32.716 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:32.716 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:32.747 -05 000000023 INF: ===================Frame #796=================== 15-12-21 21:04:32.812 -05 000000089 INF: ===================Frame #802=================== 15-12-21 21:04:32.824 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:32.840 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.011C:A1\r\n 15-12-21 21:04:32.840 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:33.011 -05 000000089 INF: ===================Frame #817=================== 15-12-21 21:04:33.013 -05 000000023 INF: ===================Frame #818=================== 15-12-21 21:04:33.161 -05 000000089 INF: ===================Frame #829=================== 15-12-21 21:04:33.197 -05 000000023 INF: ===================Frame #832=================== 15-12-21 21:04:33.313 -05 000000089 INF: ===================Frame #841=================== 15-12-21 21:04:33.362 -05 000000023 INF: ===================Frame #845=================== 15-12-21 21:04:33.417 -05 000000045 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 21:04:33.463 -05 000000089 INF: ===================Frame #853=================== 15-12-21 21:04:33.513 -05 000000023 INF: ===================Frame #857=================== 15-12-21 21:04:33.614 -05 000000089 INF: ===================Frame #865=================== 15-12-21 21:04:33.663 -05 000000023 INF: ===================Frame #869=================== 15-12-21 21:04:33.765 -05 000000089 INF: ===================Frame #877=================== 15-12-21 21:04:33.768 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:33.813 -05 000000023 INF: ===================Frame #881=================== 15-12-21 21:04:33.915 -05 000000089 INF: ===================Frame #889=================== 15-12-21 21:04:33.964 -05 000000023 INF: ===================Frame #893=================== 15-12-21 21:04:34.065 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:34.066 -05 000000089 INF: ===================Frame #901=================== 15-12-21 21:04:34.088 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:34.088 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:34.114 -05 000000023 INF: ===================Frame #905=================== 15-12-21 21:04:34.191 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:34.212 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.039C:A1\r\n 15-12-21 21:04:34.212 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:34.217 -05 000000089 INF: ===================Frame #913=================== 15-12-21 21:04:34.264 -05 000000023 INF: ===================Frame #916=================== 15-12-21 21:04:34.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:34.339 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:34.339 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:34.364 -05 000000045 INF: ===================WaitCommand=================== 15-12-21 21:04:34.365 -05 000000045 INF: WaitCommand(15000) end 15-12-21 21:04:34.365 -05 000000045 INF: ====================================== 15-12-21 21:04:34.370 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:34.372 -05 000000089 INF: ===================Frame #925=================== 15-12-21 21:04:34.376 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:34.426 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:34.445 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:34.526 -05 000000089 INF: ===================Frame #937=================== 15-12-21 21:04:34.535 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:34.537 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:34.537 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 21:04:34.537 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:34.537 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 21:04:34.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:34.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:34.721 -05 000000089 INF: ===================Frame #952=================== 15-12-21 21:04:34.721 -05 000000023 INF: ===================Frame #952=================== 15-12-21 21:04:34.791 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:34.924 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:04:34.932 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:35.124 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:04:35.148 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:04:35.148 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:35.253 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:35.275 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:04:35.275 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:35.354 -05 000000023 INF: ===================Frame #1003=================== 15-12-21 21:04:35.383 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:35.384 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 21:04:35.384 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:35.460 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:35.468 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 120, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:04:35.505 -05 000000023 INF: ===================Frame #1015=================== 15-12-21 21:04:35.541 -05 000000089 INF: ===================Frame #1017=================== 15-12-21 21:04:35.561 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:04:35.646 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 21:04:35.646 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 21:04:35.647 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 21:04:35.655 -05 000000023 INF: ===================Frame #1026=================== 15-12-21 21:04:35.691 -05 000000089 INF: ===================Frame #1029=================== 15-12-21 21:04:35.746 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P23040R\r 15-12-21 21:04:35.835 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:35.842 -05 000000089 INF: ===================Frame #1041=================== 15-12-21 21:04:35.918 -05 000000023 INF: ===================Frame #1047=================== 15-12-21 21:04:35.935 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:35.941 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:35.960 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:35.960 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:35.993 -05 000000089 INF: ===================Frame #1053=================== 15-12-21 21:04:36.023 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:36.062 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:36.068 -05 000000023 INF: ===================Frame #1059=================== 15-12-21 21:04:36.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:36.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:36.143 -05 000000089 INF: ===================Frame #1065=================== 15-12-21 21:04:36.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:36.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:36.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:36.219 -05 000000023 INF: ===================Frame #1071=================== 15-12-21 21:04:36.273 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:36.295 -05 000000089 INF: ===================Frame #1077=================== 15-12-21 21:04:36.334 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:36.369 -05 000000023 INF: ===================Frame #1083=================== 15-12-21 21:04:36.445 -05 000000089 INF: ===================Frame #1089=================== 15-12-21 21:04:36.519 -05 000000023 INF: ===================Frame #1095=================== 15-12-21 21:04:36.584 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:36.595 -05 000000089 INF: ===================Frame #1101=================== 15-12-21 21:04:36.647 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:36.669 -05 000000023 INF: ===================Frame #1107=================== 15-12-21 21:04:36.745 -05 000000089 INF: ===================Frame #1113=================== 15-12-21 21:04:36.820 -05 000000023 INF: ===================Frame #1118=================== 15-12-21 21:04:36.896 -05 000000089 INF: ===================Frame #1124=================== 15-12-21 21:04:36.897 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:36.957 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:37.113 -05 000000023 INF: ===================Frame #1142=================== 15-12-21 21:04:37.210 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:37.269 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:37.308 -05 000000023 INF: ===================Frame #1157=================== 15-12-21 21:04:37.326 -05 000000089 INF: ===================Frame #1159=================== 15-12-21 21:04:37.437 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:37.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:37.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:37.459 -05 000000023 INF: ===================Frame #1169=================== 15-12-21 21:04:37.476 -05 000000089 INF: ===================Frame #1170=================== 15-12-21 21:04:37.519 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:37.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:37.583 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:37.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:37.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:37.609 -05 000000023 INF: ===================Frame #1181=================== 15-12-21 21:04:37.673 -05 000000089 INF: ===================Frame #1186=================== 15-12-21 21:04:37.683 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:37.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:37.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:37.763 -05 000000023 INF: ===================Frame #1193=================== 15-12-21 21:04:37.833 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:37.843 -05 000000089 INF: ===================Frame #1199=================== 15-12-21 21:04:37.894 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:37.913 -05 000000023 INF: ===================Frame #1205=================== 15-12-21 21:04:37.950 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:37.995 -05 000000089 INF: ===================Frame #1211=================== 15-12-21 21:04:38.019 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.983C:A1\r\n 15-12-21 21:04:38.019 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:38.064 -05 000000023 INF: ===================Frame #1217=================== 15-12-21 21:04:38.144 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:38.145 -05 000000089 INF: ===================Frame #1223=================== 15-12-21 21:04:38.206 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:38.214 -05 000000023 INF: ===================Frame #1229=================== 15-12-21 21:04:38.296 -05 000000089 INF: ===================Frame #1235=================== 15-12-21 21:04:38.365 -05 000000023 INF: ===================Frame #1241=================== 15-12-21 21:04:38.448 -05 000000089 INF: ===================Frame #1247=================== 15-12-21 21:04:38.456 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:38.518 -05 000000041 INF: FPGA: Recv TDIYWAIT 15-12-21 21:04:38.518 -05 000000023 INF: ===================Frame #1250=================== 15-12-21 21:04:38.518 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:04:38.519 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:38.521 -05 000000061 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:04:38.523 -05 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:04:38.523 -05 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:04:38.529 -05 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:04:38.529 -05 000000045 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:04:38.529 -05 000000045 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:04:38.529 -05 000000078 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:04:38.533 -05 000000078 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:04:38.533 -05 000000078 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:04:38.533 -05 000000078 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:04:38.535 -05 000000078 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:04:38.599 -05 000000089 INF: ===================Frame #1250=================== 15-12-21 21:04:38.704 -05 000000092 INF: FPGA: Recv EX1MV 15-12-21 21:04:38.704 -05 000000078 INF: Excitation Filter 1: Moved 36 steps in 171.5811 ms 15-12-21 21:04:38.704 -05 000000078 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 171.6908 ms 15-12-21 21:04:38.705 -05 000000078 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 171.7897 ms 15-12-21 21:04:38.705 -05 000000078 INF: ====================================== 15-12-21 21:04:38.713 -05 000000023 INF: Camera complete - got 1250 frames. 15-12-21 21:04:38.715 -05 000000023 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:04:38.721 -05 000000089 INF: Camera complete - got 1250 frames. 15-12-21 21:04:38.722 -05 000000089 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:04:38.769 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:38.828 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:38.850 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 21:04:38.877 -05 000000023 INF: ====================================== 15-12-21 21:04:38.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:38.952 -05 000000025 INF: FPGA: Recv EX2MV 15-12-21 21:04:38.952 -05 000000045 INF: Excitation Filter 2: Moved 107 steps in 423.5116 ms 15-12-21 21:04:38.953 -05 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 423.697 ms 15-12-21 21:04:38.953 -05 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 429.3368 ms 15-12-21 21:04:38.953 -05 000000045 INF: ====================================== 15-12-21 21:04:38.954 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:38.954 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:38.957 -05 000000061 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:04:38.964 -05 000000061 INF: ====================================== 15-12-21 21:04:39.000 -05 000000089 INF: ===================Camera TDI=================== 15-12-21 21:04:39.023 -05 000000038 INF: Y Motor: Moved to 9.0764 after 16697 ms 15-12-21 21:04:39.024 -05 000000089 INF: ====================================== 15-12-21 21:04:39.024 -05 000000038 INF: ====================================== 15-12-21 21:04:39.026 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 21:04:39.028 -05 000000037 INF: ====================================== 15-12-21 21:04:39.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:39.031 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:39.034 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.034 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:04:39.061 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:39.097 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:39.120 -05 000000060 INF: FPGA: Recv TDICLINES 10118 15-12-21 21:04:39.120 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:04:39.125 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 21:04:39.125 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:39.175 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:39.175 -05 000000084 INF: FPGA: Recv TDIYERD 907643 15-12-21 21:04:39.186 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 21:04:39.229 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:39.235 -05 000000029 INF: FPGA: Recv ZADCR 24257 15-12-21 21:04:39.235 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.092. Y moved -60.304 mm 15-12-21 21:04:39.235 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:04:39.295 -05 000000092 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:04:39.295 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:04:39.295 -05 000000057 INF: TDIScan finished after 21828.157 ms 15-12-21 21:04:39.295 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:04:39.296 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:39.296 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:39.296 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:04:39.299 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.329 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.153 um 15-12-21 21:04:39.329 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.331 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.333 -05 000000041 INF: ===================Dither Clean Up Command=================== 15-12-21 21:04:39.333 -05 000000037 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:04:39.333 -05 000000037 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:04:39.333 -05 000000078 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:04:39.334 -05 000000078 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:04:39.334 -05 000000078 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:04:39.334 -05 000000061 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:04:39.334 -05 000000089 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:04:39.334 -05 000000086 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:04:39.335 -05 000000089 INF: ===================LFT:Extracting coords=================== 15-12-21 21:04:39.336 -05 000000061 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:04:39.359 -05 000000025 INF: FPGA: Recv ZSTEP 15-12-21 21:04:39.359 -05 000000025 INF: FPGA: Recv ZSEL 15-12-21 21:04:39.359 -05 000000061 INF: FPGA: Xmit ZDACW 29061\n 15-12-21 21:04:39.360 -05 000000037 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:04:39.360 -05 000000078 INF: ====================================== 15-12-21 21:04:39.362 -05 000000086 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:04:39.363 -05 000000037 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:04:39.363 -05 000000037 INF: ====================================== 15-12-21 21:04:39.383 -05 000000089 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:04:39.386 -05 000000089 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:04:39.388 -05 000000084 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:39.388 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:39.388 -05 000000038 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:39.388 -05 000000084 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:04:39.388 -05 000000038 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:04:39.389 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:04:39.389 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:39.390 -05 000000092 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:04:39.403 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:39.420 -05 000000023 INF: FPGA: Recv ZDACW 15-12-21 21:04:39.421 -05 000000086 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:04:39.449 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.926C:A1\r\n 15-12-21 21:04:39.449 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:39.450 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:39.450 -05 000000061 INF: ====================================== 15-12-21 21:04:39.450 -05 000000086 INF: ====================================== 15-12-21 21:04:39.515 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:39.575 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:39.604 -05 000000084 INF: LFT found best fwhm score 2.549279 in 169 ms 15-12-21 21:04:39.604 -05 000000084 INF: LFT found good score at index 8101 with fwhm value 2.549279. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:1,B 15-12-21 21:04:39.605 -05 000000084 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:39.605 -05 000000084 INF: ====================================== 15-12-21 21:04:39.627 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:39.627 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:39.627 -05 000000092 INF: LFT found best fwhm score 2.46858 in 178 ms 15-12-21 21:04:39.627 -05 000000092 INF: LFT found good score at index 5949 with fwhm value 2.46858. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:1,B 15-12-21 21:04:39.628 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:39.628 -05 000000092 INF: ====================================== 15-12-21 21:04:39.646 -05 000000045 INF: LFT found best fwhm score 2.661541 in 210 ms 15-12-21 21:04:39.646 -05 000000045 INF: LFT found good score at index 4085 with fwhm value 2.661541. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:1,B 15-12-21 21:04:39.646 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:39.647 -05 000000045 INF: ====================================== 15-12-21 21:04:39.660 -05 000000038 INF: LFT found best fwhm score 2.510433 in 224 ms 15-12-21 21:04:39.660 -05 000000038 INF: LFT found good score at index 6929 with fwhm value 2.510433. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:1,B 15-12-21 21:04:39.660 -05 000000038 INF: ===================LookupFocusTracking=================== 15-12-21 21:04:39.661 -05 000000038 INF: ====================================== 15-12-21 21:04:39.664 -05 000000089 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:04:39.665 -05 000000089 INF: LFT weighted average best Z for bottom surface is at -0.091mm FC:A, C:29,L:1,B 15-12-21 21:04:39.665 -05 000000089 INF: ====================================== 15-12-21 21:04:39.674 -05 000000041 INF: ====================================== 15-12-21 21:04:39.676 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.678 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:04:39.678 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.678 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:04:39.679 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.679 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:04:39.679 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.679 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:04:39.680 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.680 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:04:39.680 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:04:39.681 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:04:39.681 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 21:04:39.682 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 21:04:39.682 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 21:04:39.682 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 21:04:39.682 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:04:39.683 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:39.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:04:39.683 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:04:39.684 -05 000000054 INF: ===================Registering and Extracting C029 L001 T2201=================== 15-12-21 21:04:39.684 -05 000000079 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202=================== 15-12-21 21:04:39.684 -05 000000068 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203=================== 15-12-21 21:04:39.685 -05 000000063 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204=================== 15-12-21 21:04:39.685 -05 000000028 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205=================== 15-12-21 21:04:39.685 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 1=================== 15-12-21 21:04:39.686 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface=================== 15-12-21 21:04:39.687 -05 000000048 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206, Registering and Extracting C029 L001 T2207=================== 15-12-21 21:04:39.687 -05 000000051 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206, Registering and Extracting C029 L001 T2207, Registering and Extracting C029 L001 T2208=================== 15-12-21 21:04:39.687 -05 000000009 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206, Registering and Extracting C029 L001 T2207, Registering and Extracting C029 L001 T2208=================== 15-12-21 21:04:39.736 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:04:39.737 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:04:39.740 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:04:39.752 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:04:39.768 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:39.769 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:04:39.827 -05 000000057 INF: Compensator: Remaining OutOfPath 15-12-21 21:04:39.829 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:39.830 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:04:39.831 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:04:39.845 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:04:39.846 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:04:39.988 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.988 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:04:39.988 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:39.989 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -110.9 um, section = B_1 15-12-21 21:04:40.022 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:04:40.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:04:40.033 -05 000000061 INF: ===================MoveEmissionFilters=================== 15-12-21 21:04:40.033 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:04:40.033 -05 000000029 INF: ===================Move X,Y=================== 15-12-21 21:04:40.034 -05 000000040 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:04:40.034 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:04:40.034 -05 000000084 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:04:40.034 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:04:40.035 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:04:40.035 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:04:40.035 -05 000000084 INF: Z Motor: Moving to -0.1081 mm, started at -0.1109 mm 15-12-21 21:04:40.035 -05 000000084 INF: FPGA: Xmit ZTRG 0\n 15-12-21 21:04:40.035 -05 000000029 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:04:40.035 -05 000000040 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:04:40.047 -05 000000038 INF: FPGA: Recv ZTRG 15-12-21 21:04:40.047 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:04:40.047 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:04:40.047 -05 000000045 INF: ===================Move X Motor without settling=================== 15-12-21 21:04:40.047 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:04:40.047 -05 000000084 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 21:04:40.048 -05 000000045 INF: X Motor: Xmit PR VM\n 15-12-21 21:04:40.048 -05 000000086 INF: ===================Move Y Motor without settling=================== 15-12-21 21:04:40.053 -05 000000037 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:04:40.053 -05 000000086 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 21:04:40.053 -05 000000092 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:04:40.053 -05 000000086 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:04:40.054 -05 000000092 INF: ====================================== 15-12-21 21:04:40.054 -05 000000060 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:04:40.054 -05 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:04:40.059 -05 000000086 INF: Y Motor: Xmit 1G\n 15-12-21 21:04:40.059 -05 000000038 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:04:40.059 -05 000000060 INF: ====================================== 15-12-21 21:04:40.059 -05 000000025 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:04:40.063 -05 000000055 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:04:40.063 -05 000000037 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:04:40.063 -05 000000038 INF: ====================================== 15-12-21 21:04:40.063 -05 000000037 INF: ====================================== 15-12-21 21:04:40.063 -05 000000055 INF: ====================================== 15-12-21 21:04:40.064 -05 000000025 INF: ====================================== 15-12-21 21:04:40.069 -05 000000040 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:04:40.078 -05 000000089 INF: ====================================== 15-12-21 21:04:40.079 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:40.079 -05 000000092 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:04:40.083 -05 000000023 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:04:40.084 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:04:40.087 -05 000000040 INF: ====================================== 15-12-21 21:04:40.087 -05 000000092 INF: ====================================== 15-12-21 21:04:40.089 -05 000000078 INF: ====================================== 15-12-21 21:04:40.104 -05 000000023 INF: ====================================== 15-12-21 21:04:40.105 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:04:40.117 -05 000000025 INF: FPGA: Recv ZYT 15-12-21 21:04:40.117 -05 000000084 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 21:04:40.117 -05 000000084 INF: FPGA: Xmit ZMV 28334\n 15-12-21 21:04:40.119 -05 000000086 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:04:40.120 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:40.132 -05 000000045 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:04:40.132 -05 000000086 INF: Y Motor: Recv 1G\r\n 15-12-21 21:04:40.132 -05 000000045 INF: X Motor: Xmit PR VI\n 15-12-21 21:04:40.142 -05 000000086 INF: Y Motor: Xmit 1D\n 15-12-21 21:04:40.155 -05 000000041 INF: ====================================== 15-12-21 21:04:40.168 -05 000000061 INF: ====================================== 15-12-21 21:04:40.171 -05 000000092 INF: FPGA: Recv ZMV 15-12-21 21:04:40.171 -05 000000084 INF: Z Motor: MoveAndTrigger 'ZMV' command took 53.9178 ms 15-12-21 21:04:40.171 -05 000000084 INF: FPGA: Xmit ZDACR\n 15-12-21 21:04:40.186 -05 000000086 INF: Y Motor: Recv 1D\r\n 15-12-21 21:04:40.189 -05 000000086 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:04:40.192 -05 000000045 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:04:40.192 -05 000000045 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:04:40.192 -05 000000045 INF: X Motor: Moving to 17.1670 mm @15.000 mm/sec, started at 13.6436 mm 15-12-21 21:04:40.193 -05 000000045 INF: X Motor: Xmit MA -17135\n 15-12-21 21:04:40.196 -05 000000086 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:04:40.248 -05 000000060 INF: FPGA: Recv ZDACR 28334 15-12-21 21:04:40.261 -05 000000084 INF: Z Motor: MoveAndTrigger took 226.5685 ms w/comms 15-12-21 21:04:40.261 -05 000000084 INF: Z Motor: After move to -0.1081, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 21:04:40.261 -05 000000084 INF: Z Motor: MoveAbsStepped took 226.7582 ms 15-12-21 21:04:40.274 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:04:40.287 -05 000000045 INF: X Motor: Recv MA -17135\r\n> 15-12-21 21:04:40.287 -05 000000045 INF: X Motor: WaitUntilStopped 60235 15-12-21 21:04:40.367 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:04:40.391 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:40.397 -05 000000060 INF: ===================TDI Scan Setup=================== 15-12-21 21:04:40.398 -05 000000089 INF: ===================Camera Arm TDI=================== 15-12-21 21:04:40.415 -05 000000060 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:40.444 -05 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:04:40.458 -05 000000060 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:04:40.471 -05 000000060 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:04:40.473 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:40.512 -05 000000055 INF: FPGA: Recv ZSEL 15-12-21 21:04:40.513 -05 000000060 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:04:40.513 -05 000000060 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:40.517 -05 000000060 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:04:40.518 -05 000000060 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:04:40.518 -05 000000060 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:04:40.576 -05 000000078 INF: FPGA: Recv ZSTEP 15-12-21 21:04:40.577 -05 000000060 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:40.582 -05 000000060 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:04:40.583 -05 000000060 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:40.605 -05 000000060 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:04:40.609 -05 000000060 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:04:40.609 -05 000000060 INF: Z Motor: Arming to move to -0.0681 mm 15-12-21 21:04:40.609 -05 000000060 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:04:40.641 -05 000000038 INF: FPGA: Recv ZYT 15-12-21 21:04:40.641 -05 000000060 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907641 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:04:40.641 -05 000000060 INF: FPGA: Xmit ZARM 17848\n 15-12-21 21:04:40.788 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:40.791 -05 000000040 INF: FPGA: Recv ZARM 15-12-21 21:04:40.791 -05 000000060 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 150.061 ms 15-12-21 21:04:40.791 -05 000000060 INF: Z Motor: ArmAbsStepped took 182.5506 ms 15-12-21 21:04:40.792 -05 000000060 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:04:40.795 -05 000000060 INF: ===================TDI Scan Setup=================== 15-12-21 21:04:40.854 -05 000000060 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:04:40.855 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:40.855 -05 000000060 INF: ===================TDI Scan Setup=================== 15-12-21 21:04:40.857 -05 000000060 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:04:40.857 -05 000000060 INF: ===================TDI Scan Setup=================== 15-12-21 21:04:40.859 -05 000000060 INF: ====================================== 15-12-21 21:04:40.961 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:41.031 -05 000000045 INF: X Motor: Xmit PR ER\n 15-12-21 21:04:41.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:41.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:41.092 -05 000000045 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:04:41.092 -05 000000045 INF: X Motor: Moved to 17.1665 after 804 ms 15-12-21 21:04:41.093 -05 000000045 INF: ====================================== 15-12-21 21:04:41.112 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:41.157 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:41.160 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:41.160 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 21:04:41.262 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:04:41.267 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:41.267 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:41.353 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 21:04:41.353 -05 000000062 INF: Current Position of Pump is: 23040 15-12-21 21:04:41.353 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:04:41.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:41.500 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:04:41.502 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:41.502 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:41.600 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:41.700 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:41.778 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:04:42.028 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:42.093 -05 000000089 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:04:42.093 -05 000000089 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:04:42.094 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:42.094 -05 000000089 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:04:42.094 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:42.095 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 21:04:42.095 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:42.165 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:04:42.165 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:42.270 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:04:42.340 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:04:42.340 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:42.504 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:42.601 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:04:42.601 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:42.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:42.762 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:42.845 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:42.846 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:42.846 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:42.847 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°=================== 15-12-21 21:04:42.952 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:20.00\r 15-12-21 21:04:42.968 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:04:42.968 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:43.104 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:43.192 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:43.192 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:43.298 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 21:04:43.371 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:04:43.371 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:43.478 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:43.479 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:43.479 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:43.485 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:43.486 -05 000000062 INF: WaitCommand(15000) start 15-12-21 21:04:43.486 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 15 of 15 seconds left=================== 15-12-21 21:04:43.495 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.977C:A1\r\n 15-12-21 21:04:43.495 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:43.598 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:43.620 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:43.620 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:43.723 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:43.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:43.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:43.799 -05 000000089 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:04:43.800 -05 000000089 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:04:43.800 -05 000000089 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:04:43.801 -05 000000089 INF: ====================================== 15-12-21 21:04:43.807 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:04:43.814 -05 000000084 INF: ====================================== 15-12-21 21:04:43.872 -05 000000086 INF: Y Motor: Moved to 70.6885 after 3675 ms 15-12-21 21:04:43.873 -05 000000086 INF: ====================================== 15-12-21 21:04:43.875 -05 000000029 INF: ===================Move X,Y=================== 15-12-21 21:04:43.884 -05 000000029 INF: ====================================== 15-12-21 21:04:43.885 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:04:43.890 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:43.893 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:04:43.932 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:04:43.933 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:04:43.993 -05 000000029 INF: FPGA: Recv ZFREQCL 15-12-21 21:04:43.994 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:04:43.995 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:43.995 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:04:44.055 -05 000000090 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:04:44.055 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:04:44.056 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:04:44.057 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:04:44.059 -05 000000025 INF: ===================TDI FPGA Arm=================== 15-12-21 21:04:44.059 -05 000000060 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:04:44.063 -05 000000060 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:04:44.071 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:04:44.072 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:04:44.072 -05 000000025 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:04:44.117 -05 000000029 INF: FPGA: Recv TDIYPOS 15-12-21 21:04:44.118 -05 000000060 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:04:44.118 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:04:44.119 -05 000000060 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:04:44.119 -05 000000060 INF: ====================================== 15-12-21 21:04:44.124 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:04:44.124 -05 000000025 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:04:44.179 -05 000000056 INF: FPGA: Recv TDIYARM3 15-12-21 21:04:44.180 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:04:44.182 -05 000000025 INF: ===================TDI FPGA Arm=================== 15-12-21 21:04:44.187 -05 000000025 INF: ====================================== 15-12-21 21:04:44.189 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:04:44.193 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:04:44.194 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:44.205 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:44.210 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:44.232 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:44.232 -05 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:04:44.239 -05 000000090 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:04:44.239 -05 000000090 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:04:44.239 -05 000000090 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:04:44.239 -05 000000090 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:04:44.259 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 21:04:44.259 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:44.263 -05 000000055 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:04:44.267 -05 000000055 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:04:44.267 -05 000000055 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:04:44.267 -05 000000055 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:04:44.267 -05 000000055 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:04:44.424 -05 000000025 INF: FPGA: Recv EX1MV 15-12-21 21:04:44.425 -05 000000090 INF: Excitation Filter 1: Moved -36 steps in 185.4216 ms 15-12-21 21:04:44.425 -05 000000090 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 185.675 ms 15-12-21 21:04:44.425 -05 000000090 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 185.7864 ms 15-12-21 21:04:44.426 -05 000000090 INF: ====================================== 15-12-21 21:04:44.496 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:44.497 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 14 of 15 seconds left=================== 15-12-21 21:04:44.577 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:44.618 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 62.990C:A1\r\n 15-12-21 21:04:44.618 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:44.726 -05 000000023 INF: FPGA: Recv EX2MV 15-12-21 21:04:44.726 -05 000000055 INF: Excitation Filter 2: Moved -107 steps in 458.4334 ms 15-12-21 21:04:44.726 -05 000000055 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 458.5511 ms 15-12-21 21:04:44.726 -05 000000055 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 458.6868 ms 15-12-21 21:04:44.727 -05 000000055 INF: ====================================== 15-12-21 21:04:44.733 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:44.735 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:04:44.744 -05 000000086 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:04:44.744 -05 000000037 INF: ===================Move Y Motor without settling=================== 15-12-21 21:04:44.744 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 21:04:44.744 -05 000000089 INF: ===================FPGA Z Wait=================== 15-12-21 21:04:44.744 -05 000000037 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:04:44.749 -05 000000089 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:04:44.750 -05 000000037 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:04:44.756 -05 000000086 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:04:44.756 -05 000000084 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:04:44.756 -05 000000086 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:04:44.756 -05 000000037 INF: Y Motor: Xmit 1G\n 15-12-21 21:04:44.762 -05 000000025 INF: ===================Camera TDI=================== 15-12-21 21:04:44.765 -05 000000040 INF: ===================Camera TDI=================== 15-12-21 21:04:44.805 -05 000000037 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:04:44.806 -05 000000037 INF: Y Motor: Recv 1G\r\n 15-12-21 21:04:44.807 -05 000000037 INF: Y Motor: Xmit 1D\n 15-12-21 21:04:44.867 -05 000000037 INF: Y Motor: Recv 1D\r\n 15-12-21 21:04:44.868 -05 000000037 INF: Y Motor: Recv *407662\r\n 15-12-21 21:04:44.869 -05 000000037 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:04:44.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:44.993 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:44.993 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:45.109 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:45.109 -05 000000041 INF: FPGA: Recv ZWAIT 15-12-21 21:04:45.111 -05 000000089 INF: ====================================== 15-12-21 21:04:45.128 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:45.128 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:45.218 -05 000000025 INF: ===================Frame #1=================== 15-12-21 21:04:45.220 -05 000000040 INF: ===================Frame #1=================== 15-12-21 21:04:45.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:45.319 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:45.319 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:45.350 -05 000000054 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206, Registering and Extracting C029 L001 T2207=================== 15-12-21 21:04:45.449 -05 000000040 INF: ===================Frame #14=================== 15-12-21 21:04:45.449 -05 000000025 INF: ===================Frame #16=================== 15-12-21 21:04:45.464 -05 000000027 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206, Registering and Extracting C029 L001 T2207, Registering and Extracting C029 L001 T2209=================== 15-12-21 21:04:45.499 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:45.499 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 13 of 15 seconds left=================== 15-12-21 21:04:45.848 -05 000000040 INF: ===================Frame #51=================== 15-12-21 21:04:45.855 -05 000000025 INF: ===================Frame #51=================== 15-12-21 21:04:46.000 -05 000000040 INF: ===================Frame #63=================== 15-12-21 21:04:46.018 -05 000000025 INF: ===================Frame #64=================== 15-12-21 21:04:46.150 -05 000000040 INF: ===================Frame #75=================== 15-12-21 21:04:46.262 -05 000000025 INF: ===================Frame #83=================== 15-12-21 21:04:46.300 -05 000000040 INF: ===================Frame #87=================== 15-12-21 21:04:46.412 -05 000000025 INF: ===================Frame #95=================== 15-12-21 21:04:46.450 -05 000000040 INF: ===================Frame #98=================== 15-12-21 21:04:46.500 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:46.501 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 12 of 15 seconds left=================== 15-12-21 21:04:46.563 -05 000000025 INF: ===================Frame #107=================== 15-12-21 21:04:46.694 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:46.708 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:46.708 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:46.713 -05 000000025 INF: ===================Frame #119=================== 15-12-21 21:04:46.732 -05 000000040 INF: ===================Frame #121=================== 15-12-21 21:04:46.808 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:46.834 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:46.834 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:46.864 -05 000000025 INF: ===================Frame #131=================== 15-12-21 21:04:46.883 -05 000000040 INF: ===================Frame #133=================== 15-12-21 21:04:46.942 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:46.961 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:46.961 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:46.983 -05 000000068 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206, Registering and Extracting C029 L001 T2207=================== 15-12-21 21:04:47.015 -05 000000025 INF: ===================Frame #143=================== 15-12-21 21:04:47.033 -05 000000040 INF: ===================Frame #144=================== 15-12-21 21:04:47.052 -05 000000088 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206, Registering and Extracting C029 L001 T2207, Registering and Extracting C029 L001 T2210=================== 15-12-21 21:04:47.096 -05 000000048 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206=================== 15-12-21 21:04:47.096 -05 000000063 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205, Registering and Extracting C029 L001 T2206=================== 15-12-21 21:04:47.097 -05 000000079 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204, Registering and Extracting C029 L001 T2205=================== 15-12-21 21:04:47.097 -05 000000028 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2204=================== 15-12-21 21:04:47.149 -05 000000051 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203=================== 15-12-21 21:04:47.149 -05 000000031 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212=================== 15-12-21 21:04:47.149 -05 000000072 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212=================== 15-12-21 21:04:47.149 -05 000000044 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212, Registering and Extracting C029 L001 T2213=================== 15-12-21 21:04:47.150 -05 000000020 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212, Registering and Extracting C029 L001 T2213, Registering and Extracting C029 L001 T2214=================== 15-12-21 21:04:47.166 -05 000000025 INF: ===================Frame #155=================== 15-12-21 21:04:47.250 -05 000000034 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212, Registering and Extracting C029 L001 T2213, Registering and Extracting C029 L001 T2214, Registering and Extracting C029 L001 T2215=================== 15-12-21 21:04:47.265 -05 000000040 INF: ===================Frame #163=================== 15-12-21 21:04:47.310 -05 000000009 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212, Registering and Extracting C029 L001 T2213, Registering and Extracting C029 L001 T2214=================== 15-12-21 21:04:47.316 -05 000000025 INF: ===================Frame #167=================== 15-12-21 21:04:47.350 -05 000000082 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212, Registering and Extracting C029 L001 T2213, Registering and Extracting C029 L001 T2214, Registering and Extracting C029 L001 T2216=================== 15-12-21 21:04:47.417 -05 000000040 INF: ===================Frame #175=================== 15-12-21 21:04:47.467 -05 000000025 INF: ===================Frame #179=================== 15-12-21 21:04:47.501 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:47.501 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 11 of 15 seconds left=================== 15-12-21 21:04:47.647 -05 000000040 INF: ===================Frame #193=================== 15-12-21 21:04:47.647 -05 000000025 INF: ===================Frame #193=================== 15-12-21 21:04:47.797 -05 000000040 INF: ===================Frame #205=================== 15-12-21 21:04:47.798 -05 000000025 INF: ===================Frame #205=================== 15-12-21 21:04:47.949 -05 000000025 INF: ===================Frame #217=================== 15-12-21 21:04:47.949 -05 000000040 INF: ===================Frame #217=================== 15-12-21 21:04:48.100 -05 000000025 INF: ===================Frame #229=================== 15-12-21 21:04:48.100 -05 000000040 INF: ===================Frame #229=================== 15-12-21 21:04:48.251 -05 000000040 INF: ===================Frame #241=================== 15-12-21 21:04:48.251 -05 000000025 INF: ===================Frame #241=================== 15-12-21 21:04:48.266 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:48.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:48.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:48.402 -05 000000025 INF: ===================Frame #253=================== 15-12-21 21:04:48.402 -05 000000040 INF: ===================Frame #253=================== 15-12-21 21:04:48.434 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:48.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:48.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:48.501 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:48.502 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 10 of 15 seconds left=================== 15-12-21 21:04:48.552 -05 000000040 INF: ===================Frame #265=================== 15-12-21 21:04:48.552 -05 000000025 INF: ===================Frame #265=================== 15-12-21 21:04:48.642 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:48.677 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:48.677 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:48.704 -05 000000040 INF: ===================Frame #276=================== 15-12-21 21:04:48.704 -05 000000025 INF: ===================Frame #276=================== 15-12-21 21:04:48.789 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:48.863 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.005C:A1\r\n 15-12-21 21:04:48.863 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:49.180 -05 000000027 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212, Registering and Extracting C029 L001 T2213, Registering and Extracting C029 L001 T2214=================== 15-12-21 21:04:49.424 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:49.500 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 21:04:49.500 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:49.502 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:49.503 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 9 of 15 seconds left=================== 15-12-21 21:04:49.724 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:49.742 -05 000000040 INF: ===================Frame #359=================== 15-12-21 21:04:49.767 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 57.157C:A1\r\n 15-12-21 21:04:49.767 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:49.892 -05 000000040 INF: ===================Frame #371=================== 15-12-21 21:04:49.955 -05 000000025 INF: ===================Frame #375=================== 15-12-21 21:04:49.994 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:50.015 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:50.015 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:50.044 -05 000000040 INF: ===================Frame #382=================== 15-12-21 21:04:50.106 -05 000000025 INF: ===================Frame #387=================== 15-12-21 21:04:50.117 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:50.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:50.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:50.243 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:50.257 -05 000000025 INF: ===================Frame #399=================== 15-12-21 21:04:50.266 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:50.266 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:50.407 -05 000000025 INF: ===================Frame #411=================== 15-12-21 21:04:50.410 -05 000000040 INF: ===================Frame #411=================== 15-12-21 21:04:50.503 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:50.504 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 8 of 15 seconds left=================== 15-12-21 21:04:50.558 -05 000000025 INF: ===================Frame #423=================== 15-12-21 21:04:50.560 -05 000000040 INF: ===================Frame #423=================== 15-12-21 21:04:50.708 -05 000000025 INF: ===================Frame #435=================== 15-12-21 21:04:50.710 -05 000000040 INF: ===================Frame #435=================== 15-12-21 21:04:50.859 -05 000000025 INF: ===================Frame #447=================== 15-12-21 21:04:50.860 -05 000000040 INF: ===================Frame #447=================== 15-12-21 21:04:51.014 -05 000000025 INF: ===================Frame #459=================== 15-12-21 21:04:51.014 -05 000000040 INF: ===================Frame #459=================== 15-12-21 21:04:51.168 -05 000000040 INF: ===================Frame #471=================== 15-12-21 21:04:51.168 -05 000000025 INF: ===================Frame #471=================== 15-12-21 21:04:51.318 -05 000000025 INF: ===================Frame #483=================== 15-12-21 21:04:51.318 -05 000000040 INF: ===================Frame #483=================== 15-12-21 21:04:51.471 -05 000000040 INF: ===================Frame #495=================== 15-12-21 21:04:51.471 -05 000000025 INF: ===================Frame #495=================== 15-12-21 21:04:51.498 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:51.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:51.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 7 of 15 seconds left=================== 15-12-21 21:04:51.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:51.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:51.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:51.621 -05 000000040 INF: ===================Frame #507=================== 15-12-21 21:04:51.621 -05 000000025 INF: ===================Frame #507=================== 15-12-21 21:04:51.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:51.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:51.745 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:51.763 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:51.763 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:51.773 -05 000000040 INF: ===================Frame #519=================== 15-12-21 21:04:51.773 -05 000000025 INF: ===================Frame #519=================== 15-12-21 21:04:51.924 -05 000000040 INF: ===================Frame #531=================== 15-12-21 21:04:51.924 -05 000000025 INF: ===================Frame #531=================== 15-12-21 21:04:52.074 -05 000000040 INF: ===================Frame #543=================== 15-12-21 21:04:52.075 -05 000000025 INF: ===================Frame #543=================== 15-12-21 21:04:52.112 -05 000000072 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212, Registering and Extracting C029 L001 T2213=================== 15-12-21 21:04:52.167 -05 000000031 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211, Registering and Extracting C029 L001 T2212=================== 15-12-21 21:04:52.169 -05 000000088 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203, Registering and Extracting C029 L001 T2211=================== 15-12-21 21:04:52.226 -05 000000040 INF: ===================Frame #555=================== 15-12-21 21:04:52.226 -05 000000025 INF: ===================Frame #555=================== 15-12-21 21:04:52.377 -05 000000025 INF: ===================Frame #567=================== 15-12-21 21:04:52.377 -05 000000040 INF: ===================Frame #567=================== 15-12-21 21:04:52.397 -05 000000044 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202, Registering and Extracting C029 L001 T2203=================== 15-12-21 21:04:52.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:52.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 6 of 15 seconds left=================== 15-12-21 21:04:52.527 -05 000000040 INF: ===================Frame #579=================== 15-12-21 21:04:52.527 -05 000000025 INF: ===================Frame #579=================== 15-12-21 21:04:52.678 -05 000000025 INF: ===================Frame #591=================== 15-12-21 21:04:52.678 -05 000000040 INF: ===================Frame #591=================== 15-12-21 21:04:52.735 -05 000000020 INF: ===================Registering and Extracting C029 L001 T2201, Registering and Extracting C029 L001 T2202=================== 15-12-21 21:04:52.736 -05 000000034 INF: ===================Registering and Extracting C029 L001 T2201=================== 15-12-21 21:04:52.736 -05 000000082 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:04:52.827 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:52.828 -05 000000025 INF: ===================Frame #603=================== 15-12-21 21:04:52.828 -05 000000040 INF: ===================Frame #603=================== 15-12-21 21:04:52.832 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:04:52.926 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:52.934 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:04:52.979 -05 000000040 INF: ===================Frame #614=================== 15-12-21 21:04:52.979 -05 000000025 INF: ===================Frame #614=================== 15-12-21 21:04:52.986 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:53.013 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:53.013 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:53.046 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:53.053 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:04:53.116 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:53.138 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:53.138 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:53.170 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:53.176 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:04:53.239 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:53.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:53.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:53.290 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:04:53.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:53.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 5 of 15 seconds left=================== 15-12-21 21:04:53.786 -05 000000040 INF: ===================Frame #678=================== 15-12-21 21:04:53.974 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:54.011 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.061C:A1\r\n 15-12-21 21:04:54.011 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:54.078 -05 000000025 INF: ===================Frame #701=================== 15-12-21 21:04:54.120 -05 000000040 INF: ===================Frame #705=================== 15-12-21 21:04:54.228 -05 000000025 INF: ===================Frame #713=================== 15-12-21 21:04:54.270 -05 000000040 INF: ===================Frame #717=================== 15-12-21 21:04:54.378 -05 000000025 INF: ===================Frame #725=================== 15-12-21 21:04:54.413 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 21:04:54.420 -05 000000040 INF: ===================Frame #728=================== 15-12-21 21:04:54.495 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:54.508 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:54.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 4 of 15 seconds left=================== 15-12-21 21:04:54.530 -05 000000025 INF: ===================Frame #737=================== 15-12-21 21:04:54.572 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:54.572 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:54.635 -05 000000040 INF: ===================Frame #745=================== 15-12-21 21:04:54.679 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:04:54.680 -05 000000025 INF: ===================Frame #749=================== 15-12-21 21:04:54.696 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 21:04:54.696 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:54.787 -05 000000040 INF: ===================Frame #757=================== 15-12-21 21:04:54.799 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:54.823 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:54.823 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:54.830 -05 000000025 INF: ===================Frame #761=================== 15-12-21 21:04:54.921 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:04:54.937 -05 000000040 INF: ===================Frame #769=================== 15-12-21 21:04:54.947 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 52.398C:A1\r\n 15-12-21 21:04:54.947 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:54.981 -05 000000025 INF: ===================Frame #773=================== 15-12-21 21:04:55.047 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:55.071 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:55.071 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:55.088 -05 000000040 INF: ===================Frame #781=================== 15-12-21 21:04:55.131 -05 000000025 INF: ===================Frame #785=================== 15-12-21 21:04:55.240 -05 000000040 INF: ===================Frame #793=================== 15-12-21 21:04:55.282 -05 000000025 INF: ===================Frame #797=================== 15-12-21 21:04:55.391 -05 000000040 INF: ===================Frame #805=================== 15-12-21 21:04:55.432 -05 000000025 INF: ===================Frame #808=================== 15-12-21 21:04:55.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:55.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 3 of 15 seconds left=================== 15-12-21 21:04:55.542 -05 000000040 INF: ===================Frame #817=================== 15-12-21 21:04:55.692 -05 000000040 INF: ===================Frame #829=================== 15-12-21 21:04:55.798 -05 000000025 INF: ===================Frame #837=================== 15-12-21 21:04:55.843 -05 000000040 INF: ===================Frame #841=================== 15-12-21 21:04:55.948 -05 000000025 INF: ===================Frame #849=================== 15-12-21 21:04:55.993 -05 000000040 INF: ===================Frame #853=================== 15-12-21 21:04:56.098 -05 000000025 INF: ===================Frame #861=================== 15-12-21 21:04:56.144 -05 000000040 INF: ===================Frame #865=================== 15-12-21 21:04:56.249 -05 000000025 INF: ===================Frame #873=================== 15-12-21 21:04:56.289 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:56.295 -05 000000040 INF: ===================Frame #877=================== 15-12-21 21:04:56.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:56.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:56.401 -05 000000025 INF: ===================Frame #885=================== 15-12-21 21:04:56.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:56.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:56.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:56.445 -05 000000040 INF: ===================Frame #889=================== 15-12-21 21:04:56.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:56.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 2 of 15 seconds left=================== 15-12-21 21:04:56.541 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:56.551 -05 000000025 INF: ===================Frame #897=================== 15-12-21 21:04:56.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:56.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:56.595 -05 000000040 INF: ===================Frame #900=================== 15-12-21 21:04:56.705 -05 000000025 INF: ===================Frame #909=================== 15-12-21 21:04:56.856 -05 000000025 INF: ===================Frame #921=================== 15-12-21 21:04:56.961 -05 000000040 INF: ===================Frame #929=================== 15-12-21 21:04:57.007 -05 000000025 INF: ===================Frame #933=================== 15-12-21 21:04:57.113 -05 000000040 INF: ===================Frame #941=================== 15-12-21 21:04:57.157 -05 000000025 INF: ===================Frame #945=================== 15-12-21 21:04:57.263 -05 000000040 INF: ===================Frame #953=================== 15-12-21 21:04:57.308 -05 000000025 INF: ===================Frame #957=================== 15-12-21 21:04:57.413 -05 000000040 INF: ===================Frame #965=================== 15-12-21 21:04:57.458 -05 000000025 INF: ===================Frame #969=================== 15-12-21 21:04:57.510 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:57.510 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 1 of 15 seconds left=================== 15-12-21 21:04:57.563 -05 000000040 INF: ===================Frame #977=================== 15-12-21 21:04:57.609 -05 000000025 INF: ===================Frame #981=================== 15-12-21 21:04:57.715 -05 000000040 INF: ===================Frame #989=================== 15-12-21 21:04:57.759 -05 000000025 INF: ===================Frame #992=================== 15-12-21 21:04:57.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:57.866 -05 000000040 INF: ===================Frame #1001=================== 15-12-21 21:04:57.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:57.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:57.980 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:04:58.006 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:58.006 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:58.017 -05 000000040 INF: ===================Frame #1013=================== 15-12-21 21:04:58.108 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:04:58.130 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:04:58.130 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:58.134 -05 000000025 INF: ===================Frame #1022=================== 15-12-21 21:04:58.168 -05 000000040 INF: ===================Frame #1025=================== 15-12-21 21:04:58.318 -05 000000040 INF: ===================Frame #1037=================== 15-12-21 21:04:58.329 -05 000000025 INF: ===================Frame #1037=================== 15-12-21 21:04:58.469 -05 000000040 INF: ===================Frame #1048=================== 15-12-21 21:04:58.479 -05 000000025 INF: ===================Frame #1049=================== 15-12-21 21:04:58.487 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:58.487 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:58.487 -05 000000062 INF: WaitCommand(15000) end 15-12-21 21:04:58.488 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 21:04:58.489 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:58.489 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:58.493 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:04:58.496 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:04:58.528 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:04:58.539 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Selecting Reagent USM (3)=================== 15-12-21 21:04:58.543 -05 000000062 INF: Valve B2: Go to position 3 15-12-21 21:04:58.543 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:04:58.596 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 21:04:58.598 -05 000000062 INF: Valve B2: 49.796 seconds since last move, > 5.000 seconds required between moves 15-12-21 21:04:58.598 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 5 to 3 15-12-21 21:04:58.598 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC3\r 15-12-21 21:04:58.601 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 21:04:58.601 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 21:04:58.630 -05 000000025 INF: ===================Frame #1061=================== 15-12-21 21:04:58.784 -05 000000025 INF: ===================Frame #1073=================== 15-12-21 21:04:59.036 -05 000000025 INF: ===================Frame #1085=================== 15-12-21 21:04:59.171 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:04:59.193 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 3\r 15-12-21 21:04:59.203 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:04:59.212 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 21:04:59.233 -05 000000025 INF: ===================Frame #1108=================== 15-12-21 21:04:59.646 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 21:04:59.666 -05 000000025 INF: ===================Frame #1143=================== 15-12-21 21:04:59.668 -05 000000040 INF: ===================Frame #1143=================== 15-12-21 21:04:59.676 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:04:59.676 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:59.778 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:04:59.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:04:59.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:59.816 -05 000000025 INF: ===================Frame #1155=================== 15-12-21 21:04:59.818 -05 000000040 INF: ===================Frame #1155=================== 15-12-21 21:04:59.897 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:04:59.922 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:04:59.922 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:04:59.967 -05 000000025 INF: ===================Frame #1167=================== 15-12-21 21:04:59.968 -05 000000040 INF: ===================Frame #1167=================== 15-12-21 21:05:00.023 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:05:00.024 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:00.024 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 21:05:00.024 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:00.046 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 21:05:00.046 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:00.111 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:05:00.118 -05 000000040 INF: ===================Frame #1179=================== 15-12-21 21:05:00.118 -05 000000025 INF: ===================Frame #1179=================== 15-12-21 21:05:00.120 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 3, aspirate port PortB, aspiration rate 750, dispense rate 2500, volume 75, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 21:05:00.149 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:00.171 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:00.171 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:00.211 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:05:00.269 -05 000000040 INF: ===================Frame #1191=================== 15-12-21 21:05:00.269 -05 000000025 INF: ===================Frame #1191=================== 15-12-21 21:05:00.270 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:05:00.297 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 21:05:00.297 -05 000000062 INF: Current Position of Pump is: 23040 15-12-21 21:05:00.297 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB=================== 15-12-21 21:05:00.298 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 47.941C:A1\r\n 15-12-21 21:05:00.298 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:00.397 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V2400s231P14400R\r 15-12-21 21:05:00.398 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:00.419 -05 000000040 INF: ===================Frame #1203=================== 15-12-21 21:05:00.419 -05 000000025 INF: ===================Frame #1203=================== 15-12-21 21:05:00.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:00.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:00.482 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:00.573 -05 000000040 INF: ===================Frame #1215=================== 15-12-21 21:05:00.573 -05 000000025 INF: ===================Frame #1215=================== 15-12-21 21:05:00.582 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:00.669 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:00.723 -05 000000040 INF: ===================Frame #1227=================== 15-12-21 21:05:00.723 -05 000000025 INF: ===================Frame #1227=================== 15-12-21 21:05:00.873 -05 000000025 INF: ===================Frame #1239=================== 15-12-21 21:05:00.874 -05 000000040 INF: ===================Frame #1239=================== 15-12-21 21:05:00.919 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:00.983 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:01.024 -05 000000025 INF: ===================Frame #1250=================== 15-12-21 21:05:01.024 -05 000000040 INF: ===================Frame #1250=================== 15-12-21 21:05:01.044 -05 000000089 INF: FPGA: Recv TDIYWAIT 15-12-21 21:05:01.045 -05 000000086 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:05:01.053 -05 000000086 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:05:01.058 -05 000000023 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:05:01.060 -05 000000023 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:05:01.060 -05 000000023 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:05:01.060 -05 000000023 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:05:01.060 -05 000000023 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:05:01.060 -05 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:05:01.061 -05 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:05:01.061 -05 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:05:01.061 -05 000000090 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:05:01.062 -05 000000090 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:05:01.222 -05 000000038 INF: FPGA: Recv EX1MV 15-12-21 21:05:01.222 -05 000000023 INF: Excitation Filter 1: Moved 36 steps in 162.4944 ms 15-12-21 21:05:01.222 -05 000000023 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 162.6263 ms 15-12-21 21:05:01.222 -05 000000023 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 162.7519 ms 15-12-21 21:05:01.223 -05 000000023 INF: ====================================== 15-12-21 21:05:01.233 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:01.278 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:01.467 -05 000000038 INF: FPGA: Recv EX2MV 15-12-21 21:05:01.467 -05 000000090 INF: Excitation Filter 2: Moved 107 steps in 405.5888 ms 15-12-21 21:05:01.467 -05 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 405.7382 ms 15-12-21 21:05:01.467 -05 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 405.8379 ms 15-12-21 21:05:01.469 -05 000000090 INF: ====================================== 15-12-21 21:05:01.475 -05 000000086 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:05:01.478 -05 000000086 INF: ====================================== 15-12-21 21:05:01.529 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:01.651 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:01.702 -05 000000037 INF: Y Motor: Moved to 9.0764 after 16832 ms 15-12-21 21:05:01.706 -05 000000037 INF: ====================================== 15-12-21 21:05:01.718 -05 000000025 INF: Camera complete - got 1250 frames. 15-12-21 21:05:01.720 -05 000000025 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:05:01.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:01.812 -05 000000040 INF: Camera complete - got 1250 frames. 15-12-21 21:05:01.813 -05 000000040 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:05:01.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:01.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:01.872 -05 000000025 INF: ===================Camera TDI=================== 15-12-21 21:05:01.902 -05 000000025 INF: ====================================== 15-12-21 21:05:01.903 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:01.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:01.936 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:01.952 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:01.952 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:01.993 -05 000000040 INF: ===================Camera TDI=================== 15-12-21 21:05:02.018 -05 000000040 INF: ====================================== 15-12-21 21:05:02.019 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 21:05:02.025 -05 000000084 INF: ====================================== 15-12-21 21:05:02.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:02.033 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:02.037 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.038 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:05:02.059 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:02.061 -05 000000038 INF: FPGA: Recv TDICLINES 10681 15-12-21 21:05:02.061 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:05:02.122 -05 000000061 INF: FPGA: Recv TDIYERD 907648 15-12-21 21:05:02.122 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 21:05:02.140 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:02.140 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:02.183 -05 000000056 INF: FPGA: Recv ZADCR 23346 15-12-21 21:05:02.183 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.089. Y moved -60.304 mm 15-12-21 21:05:02.183 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:05:02.186 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:02.247 -05 000000090 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:05:02.247 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:05:02.248 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:02.248 -05 000000057 INF: TDIScan finished after 22399.3938 ms 15-12-21 21:05:02.248 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:05:02.248 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:05:02.250 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.278 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.043 um 15-12-21 21:05:02.278 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.289 -05 000000060 INF: ===================Dither Clean Up Command=================== 15-12-21 21:05:02.290 -05 000000090 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:05:02.290 -05 000000084 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:05:02.290 -05 000000090 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:05:02.290 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:05:02.294 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:05:02.296 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:05:02.296 -05 000000041 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:05:02.297 -05 000000061 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:05:02.301 -05 000000041 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:05:02.305 -05 000000061 INF: ===================LFT:Extracting coords=================== 15-12-21 21:05:02.309 -05 000000086 INF: FPGA: Recv ZSTEP 15-12-21 21:05:02.309 -05 000000086 INF: FPGA: Recv ZSEL 15-12-21 21:05:02.309 -05 000000041 INF: FPGA: Xmit ZDACW 28334\n 15-12-21 21:05:02.310 -05 000000055 INF: ====================================== 15-12-21 21:05:02.325 -05 000000090 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:05:02.326 -05 000000090 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:05:02.326 -05 000000084 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:05:02.326 -05 000000090 INF: ====================================== 15-12-21 21:05:02.338 -05 000000061 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:05:02.339 -05 000000061 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:05:02.340 -05 000000025 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:02.341 -05 000000025 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:05:02.341 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:02.341 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:02.341 -05 000000038 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:02.341 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:05:02.342 -05 000000038 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:05:02.342 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:05:02.371 -05 000000056 INF: FPGA: Recv ZDACW 15-12-21 21:05:02.372 -05 000000041 INF: ====================================== 15-12-21 21:05:02.387 -05 000000084 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:05:02.388 -05 000000084 INF: ====================================== 15-12-21 21:05:02.498 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:02.525 -05 000000025 INF: LFT found best fwhm score 2.794462 in 132 ms 15-12-21 21:05:02.525 -05 000000025 INF: LFT found good score at index 2405 with fwhm value 2.794462. Next cycle, cycle 30 starting Z position for bottom surface is at -0.092 mm FC:A, C:29,L:2,B 15-12-21 21:05:02.525 -05 000000025 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:02.526 -05 000000025 INF: ====================================== 15-12-21 21:05:02.556 -05 000000037 INF: LFT found best fwhm score 2.737133 in 163 ms 15-12-21 21:05:02.556 -05 000000037 INF: LFT found good score at index 8805 with fwhm value 2.737133. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:2,B 15-12-21 21:05:02.557 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:02.557 -05 000000037 INF: ====================================== 15-12-21 21:05:02.560 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:02.591 -05 000000045 INF: LFT found best fwhm score 2.918376 in 198 ms 15-12-21 21:05:02.591 -05 000000045 INF: LFT found good score at index 5637 with fwhm value 2.918376. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:2,B 15-12-21 21:05:02.591 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:02.591 -05 000000045 INF: ====================================== 15-12-21 21:05:02.592 -05 000000038 INF: LFT found best fwhm score 2.76144 in 199 ms 15-12-21 21:05:02.592 -05 000000038 INF: LFT found good score at index 8845 with fwhm value 2.76144. Next cycle, cycle 30 starting Z position for bottom surface is at -0.091 mm FC:A, C:29,L:2,B 15-12-21 21:05:02.592 -05 000000038 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:02.593 -05 000000038 INF: ====================================== 15-12-21 21:05:02.597 -05 000000061 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:05:02.600 -05 000000061 INF: LFT weighted average best Z for bottom surface is at -0.091mm FC:A, C:29,L:2,B 15-12-21 21:05:02.601 -05 000000061 INF: ====================================== 15-12-21 21:05:02.602 -05 000000060 INF: ====================================== 15-12-21 21:05:02.607 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.608 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:05:02.608 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.608 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:05:02.608 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.608 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:05:02.608 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.608 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:05:02.609 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.609 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:05:02.609 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:05:02.612 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:05:02.614 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 21:05:02.614 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 21:05:02.614 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB=================== 15-12-21 21:05:02.614 -05 000000057 INF: Waited 3 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 3, buffer wait time 0 15-12-21 21:05:02.614 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:05:02.614 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:05:02.615 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:05:02.615 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:05:02.615 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:05:02.616 -05 000000082 INF: ===================Registering and Extracting C029 L002 T2101=================== 15-12-21 21:05:02.616 -05 000000034 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102=================== 15-12-21 21:05:02.617 -05 000000020 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103=================== 15-12-21 21:05:02.617 -05 000000044 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104=================== 15-12-21 21:05:02.617 -05 000000072 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105=================== 15-12-21 21:05:02.617 -05 000000031 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106=================== 15-12-21 21:05:02.618 -05 000000088 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2107=================== 15-12-21 21:05:02.618 -05 000000027 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2107, Registering and Extracting C029 L002 T2108=================== 15-12-21 21:05:02.626 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.626 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 21:05:02.626 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:02.627 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -108.1 um, section = B_1 15-12-21 21:05:02.630 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:05:02.631 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:05:02.633 -05 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:05:02.633 -05 000000078 INF: ===================MoveEmissionFilters=================== 15-12-21 21:05:02.633 -05 000000045 INF: ===================Move X,Y=================== 15-12-21 21:05:02.634 -05 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 21:05:02.634 -05 000000086 INF: Z Motor: Entering MoveAbsStepped 15-12-21 21:05:02.634 -05 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:05:02.634 -05 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:05:02.635 -05 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:05:02.635 -05 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:05:02.635 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:05:02.635 -05 000000045 INF: ===================Move X,Y, Parallel=================== 15-12-21 21:05:02.640 -05 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:05:02.640 -05 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 21:05:02.643 -05 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:05:02.644 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 21:05:02.644 -05 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 21:05:02.644 -05 000000025 INF: ===================Move Y Motor without settling=================== 15-12-21 21:05:02.644 -05 000000090 INF: ===================Move X Motor without settling=================== 15-12-21 21:05:02.644 -05 000000025 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 21:05:02.645 -05 000000025 INF: Y Motor: Xmit 1D6568846\n 15-12-21 21:05:02.645 -05 000000090 INF: X Motor: Xmit PR VM\n 15-12-21 21:05:02.645 -05 000000055 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 21:05:02.645 -05 000000056 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 21:05:02.645 -05 000000040 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 21:05:02.645 -05 000000038 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 21:05:02.645 -05 000000040 INF: Emission Filter 12: Remaining IntoPath 15-12-21 21:05:02.650 -05 000000041 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 21:05:02.650 -05 000000025 INF: Y Motor: Xmit 1G\n 15-12-21 21:05:02.651 -05 000000040 INF: ====================================== 15-12-21 21:05:02.655 -05 000000041 INF: ====================================== 15-12-21 21:05:02.656 -05 000000056 INF: ====================================== 15-12-21 21:05:02.656 -05 000000055 INF: ====================================== 15-12-21 21:05:02.665 -05 000000038 INF: ====================================== 15-12-21 21:05:02.671 -05 000000060 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 21:05:02.671 -05 000000084 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 21:05:02.678 -05 000000041 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 21:05:02.678 -05 000000056 INF: ===================TDI Scan Setup=================== 15-12-21 21:05:02.683 -05 000000040 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 21:05:02.687 -05 000000041 INF: ====================================== 15-12-21 21:05:02.687 -05 000000040 INF: ====================================== 15-12-21 21:05:02.687 -05 000000055 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 21:05:02.687 -05 000000060 INF: ====================================== 15-12-21 21:05:02.692 -05 000000038 INF: ===================Camera Arm TDI=================== 15-12-21 21:05:02.692 -05 000000055 INF: ====================================== 15-12-21 21:05:02.692 -05 000000084 INF: ====================================== 15-12-21 21:05:02.692 -05 000000056 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:05:02.704 -05 000000025 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 21:05:02.705 -05 000000037 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 21:05:02.705 -05 000000056 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:05:02.705 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 21:05:02.708 -05 000000090 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 21:05:02.708 -05 000000090 INF: X Motor: Xmit PR VI\n 15-12-21 21:05:02.708 -05 000000025 INF: Y Motor: Recv 1G\r\n 15-12-21 21:05:02.709 -05 000000056 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 21:05:02.709 -05 000000056 INF: FPGA: Xmit ZSEL 3\n 15-12-21 21:05:02.714 -05 000000025 INF: Y Motor: Xmit 1D\n 15-12-21 21:05:02.721 -05 000000061 INF: ====================================== 15-12-21 21:05:02.722 -05 000000037 INF: ====================================== 15-12-21 21:05:02.734 -05 000000078 INF: ====================================== 15-12-21 21:05:02.767 -05 000000061 INF: FPGA: Recv ZSEL 15-12-21 21:05:02.768 -05 000000025 INF: Y Motor: Recv 1D\r\n 15-12-21 21:05:02.769 -05 000000090 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 21:05:02.769 -05 000000090 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 21:05:02.769 -05 000000090 INF: X Motor: Moving to 17.9390 mm @15.000 mm/sec, started at 17.1665 mm 15-12-21 21:05:02.770 -05 000000025 INF: Y Motor: Recv *6568846\r\n 15-12-21 21:05:02.771 -05 000000090 INF: X Motor: Xmit MA -16819\n 15-12-21 21:05:02.771 -05 000000056 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 21:05:02.773 -05 000000025 INF: Y Motor: WaitUntilStopped 62465 15-12-21 21:05:02.774 -05 000000056 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:05:02.783 -05 000000056 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 21:05:02.783 -05 000000056 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 21:05:02.783 -05 000000056 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 21:05:02.823 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:02.823 -05 000000055 INF: FPGA: Recv ZSTEP 15-12-21 21:05:02.824 -05 000000056 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:05:02.826 -05 000000090 INF: X Motor: Recv MA -16819\r\n> 15-12-21 21:05:02.826 -05 000000090 INF: X Motor: WaitUntilStopped 60051 15-12-21 21:05:02.829 -05 000000056 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 21:05:02.829 -05 000000056 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:05:02.834 -05 000000056 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 21:05:02.834 -05 000000056 INF: Z Motor: Entering ArmAbsStepped 15-12-21 21:05:02.834 -05 000000056 INF: Z Motor: Arming to move to -0.0681 mm 15-12-21 21:05:02.835 -05 000000056 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 21:05:02.886 -05 000000061 INF: FPGA: Recv ZYT 15-12-21 21:05:02.886 -05 000000056 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907643 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 21:05:02.887 -05 000000056 INF: FPGA: Xmit ZARM 17848\n 15-12-21 21:05:02.888 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:02.953 -05 000000040 INF: FPGA: Recv ZARM 15-12-21 21:05:02.954 -05 000000056 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 66.9479 ms 15-12-21 21:05:02.954 -05 000000056 INF: Z Motor: ArmAbsStepped took 119.3922 ms 15-12-21 21:05:02.956 -05 000000056 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 21:05:03.008 -05 000000056 INF: ===================TDI Scan Setup=================== 15-12-21 21:05:03.011 -05 000000056 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 21:05:03.012 -05 000000056 INF: ===================TDI Scan Setup=================== 15-12-21 21:05:03.014 -05 000000056 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 21:05:03.015 -05 000000056 INF: ===================TDI Scan Setup=================== 15-12-21 21:05:03.017 -05 000000056 INF: ====================================== 15-12-21 21:05:03.138 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:03.295 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:03.370 -05 000000090 INF: X Motor: Xmit PR ER\n 15-12-21 21:05:03.434 -05 000000090 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 21:05:03.434 -05 000000090 INF: X Motor: Moved to 17.9380 after 608 ms 15-12-21 21:05:03.436 -05 000000090 INF: ====================================== 15-12-21 21:05:03.477 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:03.497 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:03.497 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:03.545 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:03.623 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:03.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:03.684 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:03.684 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:03.823 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:03.873 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:03.885 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:03.885 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:04.024 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:04.274 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:04.340 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:04.380 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:05:04.400 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.067C:A1\r\n 15-12-21 21:05:04.400 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:04.580 -05 000000038 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:05:04.580 -05 000000038 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:05:04.580 -05 000000038 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 21:05:04.590 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:04.667 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:04.924 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:04.980 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:05.243 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:05.390 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:05:05.391 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:05.445 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 21:05:05.445 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:05.594 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:05.641 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:05.686 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:05.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:05.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:05.794 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:05:05.805 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 43.630C:A1\r\n 15-12-21 21:05:05.805 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:05.916 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:05.936 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:05.990 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:05.991 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:05.991 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:06.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:06.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:06.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:06.190 -05 000000038 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 21:05:06.190 -05 000000038 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 21:05:06.191 -05 000000038 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 21:05:06.193 -05 000000038 INF: ====================================== 15-12-21 21:05:06.199 -05 000000086 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 21:05:06.208 -05 000000086 INF: ====================================== 15-12-21 21:05:06.240 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:06.302 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:06.552 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:06.615 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:06.679 -05 000000025 INF: Y Motor: Moved to 70.6885 after 3906 ms 15-12-21 21:05:06.680 -05 000000025 INF: ====================================== 15-12-21 21:05:06.682 -05 000000045 INF: ===================Move X,Y=================== 15-12-21 21:05:06.684 -05 000000045 INF: ====================================== 15-12-21 21:05:06.694 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 21:05:06.696 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:06.696 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 21:05:06.738 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 21:05:06.739 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 21:05:06.802 -05 000000038 INF: FPGA: Recv ZFREQCL 15-12-21 21:05:06.803 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 21:05:06.803 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:06.804 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:05:06.864 -05 000000055 INF: FPGA: Recv TDIYERD 7068850 15-12-21 21:05:06.864 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 21:05:06.865 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:06.865 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:05:06.866 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:05:06.871 -05 000000025 INF: ===================TDI FPGA Arm=================== 15-12-21 21:05:06.871 -05 000000056 INF: ===================Set YMotor gains for scans=================== 15-12-21 21:05:06.874 -05 000000056 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 21:05:06.877 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:05:06.912 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 21:05:06.917 -05 000000025 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 21:05:06.934 -05 000000037 INF: FPGA: Recv TDIYPOS 15-12-21 21:05:06.935 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:05:06.946 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:06.948 -05 000000056 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 21:05:06.949 -05 000000056 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:05:06.949 -05 000000056 INF: ====================================== 15-12-21 21:05:06.950 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 21:05:06.950 -05 000000025 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 21:05:06.990 -05 000000060 INF: FPGA: Recv TDIYARM3 15-12-21 21:05:06.992 -05 000000025 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 21:05:06.995 -05 000000025 INF: ===================TDI FPGA Arm=================== 15-12-21 21:05:07.012 -05 000000025 INF: ====================================== 15-12-21 21:05:07.014 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 21:05:07.016 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:07.016 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:07.017 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:07.018 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:07.020 -05 000000037 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 21:05:07.020 -05 000000037 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 21:05:07.020 -05 000000037 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 21:05:07.020 -05 000000037 INF: Excitation Filter 2: Moving -107 steps 15-12-21 21:05:07.020 -05 000000037 INF: FPGA: Xmit EX2MV -107\n 15-12-21 21:05:07.020 -05 000000056 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 21:05:07.021 -05 000000056 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 21:05:07.021 -05 000000056 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 21:05:07.021 -05 000000056 INF: Excitation Filter 1: Moving -36 steps 15-12-21 21:05:07.022 -05 000000056 INF: FPGA: Xmit EX1MV -36\n 15-12-21 21:05:07.178 -05 000000061 INF: FPGA: Recv EX1MV 15-12-21 21:05:07.179 -05 000000056 INF: Excitation Filter 1: Moved -36 steps in 157.8821 ms 15-12-21 21:05:07.179 -05 000000056 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 158.055 ms 15-12-21 21:05:07.179 -05 000000056 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 158.1548 ms 15-12-21 21:05:07.180 -05 000000056 INF: ====================================== 15-12-21 21:05:07.196 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:07.244 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:05:07.247 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 21:05:07.345 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:05:07.404 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:07.426 -05 000000056 INF: FPGA: Recv EX2MV 15-12-21 21:05:07.426 -05 000000037 INF: Excitation Filter 2: Moved -107 steps in 405.7145 ms 15-12-21 21:05:07.426 -05 000000037 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 405.8708 ms 15-12-21 21:05:07.426 -05 000000037 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 405.9755 ms 15-12-21 21:05:07.427 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 21:05:07.427 -05 000000062 INF: Current Position of Pump is: 37440 15-12-21 21:05:07.427 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 21:05:07.427 -05 000000037 INF: ====================================== 15-12-21 21:05:07.428 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:07.428 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:07.430 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:07.441 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:07.449 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:05:07.449 -05 000000045 INF: ===================FPGA Z Wait=================== 15-12-21 21:05:07.450 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:05:07.453 -05 000000045 INF: FPGA: Xmit ZWAIT\n 15-12-21 21:05:07.454 -05 000000061 INF: ===================Move Y Motor without settling=================== 15-12-21 21:05:07.455 -05 000000061 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 21:05:07.455 -05 000000061 INF: Y Motor: Xmit 1D407662\n 15-12-21 21:05:07.456 -05 000000078 INF: ===================Camera TDI, Parallel=================== 15-12-21 21:05:07.456 -05 000000025 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 21:05:07.461 -05 000000086 INF: ===================Camera TDI=================== 15-12-21 21:05:07.479 -05 000000061 INF: Y Motor: Xmit 1G\n 15-12-21 21:05:07.480 -05 000000038 INF: ===================Camera TDI=================== 15-12-21 21:05:07.482 -05 000000025 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 21:05:07.544 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:05:07.552 -05 000000061 INF: Y Motor: Recv 1D407662\r\n 15-12-21 21:05:07.553 -05 000000061 INF: Y Motor: Recv 1G\r\n 15-12-21 21:05:07.554 -05 000000061 INF: Y Motor: Xmit 1D\n 15-12-21 21:05:07.575 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:07.701 -05 000000061 INF: Y Motor: Recv 1D\r\n 15-12-21 21:05:07.701 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:07.702 -05 000000061 INF: Y Motor: Recv *407662\r\n 15-12-21 21:05:07.703 -05 000000061 INF: Y Motor: WaitUntilStopped 76451 15-12-21 21:05:07.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:07.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:07.801 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:07.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:07.820 -05 000000040 INF: FPGA: Recv ZWAIT 15-12-21 21:05:07.821 -05 000000045 INF: ====================================== 15-12-21 21:05:07.879 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:05:07.879 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:07.880 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:07.880 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:07.880 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 21:05:07.981 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:05:08.000 -05 000000038 INF: ===================Frame #6=================== 15-12-21 21:05:08.001 -05 000000086 INF: ===================Frame #6=================== 15-12-21 21:05:08.004 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 21:05:08.004 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:08.107 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 21:05:08.128 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 21:05:08.128 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:08.166 -05 000000086 INF: ===================Frame #19=================== 15-12-21 21:05:08.166 -05 000000038 INF: ===================Frame #19=================== 15-12-21 21:05:08.231 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 21:05:08.255 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 21:05:08.255 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:08.316 -05 000000086 INF: ===================Frame #31=================== 15-12-21 21:05:08.316 -05 000000038 INF: ===================Frame #31=================== 15-12-21 21:05:08.359 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:08.359 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:08.361 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:08.361 -05 000000062 INF: WaitCommand(5000) start 15-12-21 21:05:08.361 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 21:05:08.466 -05 000000086 INF: ===================Frame #42=================== 15-12-21 21:05:08.467 -05 000000038 INF: ===================Frame #43=================== 15-12-21 21:05:08.551 -05 000000044 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2107=================== 15-12-21 21:05:08.589 -05 000000082 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106=================== 15-12-21 21:05:08.616 -05 000000051 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2109, Registering and Extracting C029 L002 T2110=================== 15-12-21 21:05:08.616 -05 000000048 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2109, Registering and Extracting C029 L002 T2110=================== 15-12-21 21:05:08.618 -05 000000038 INF: ===================Frame #54=================== 15-12-21 21:05:08.646 -05 000000072 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2109=================== 15-12-21 21:05:08.666 -05 000000086 INF: ===================Frame #58=================== 15-12-21 21:05:08.717 -05 000000009 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2109, Registering and Extracting C029 L002 T2111=================== 15-12-21 21:05:08.720 -05 000000034 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2109=================== 15-12-21 21:05:08.795 -05 000000031 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106=================== 15-12-21 21:05:08.816 -05 000000028 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2112, Registering and Extracting C029 L002 T2113=================== 15-12-21 21:05:08.816 -05 000000063 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2112, Registering and Extracting C029 L002 T2113=================== 15-12-21 21:05:08.824 -05 000000020 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106, Registering and Extracting C029 L002 T2112=================== 15-12-21 21:05:08.828 -05 000000088 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2106=================== 15-12-21 21:05:08.828 -05 000000027 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105=================== 15-12-21 21:05:08.869 -05 000000086 INF: ===================Frame #74=================== 15-12-21 21:05:08.917 -05 000000068 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2114, Registering and Extracting C029 L002 T2115, Registering and Extracting C029 L002 T2116=================== 15-12-21 21:05:08.917 -05 000000079 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2114, Registering and Extracting C029 L002 T2115, Registering and Extracting C029 L002 T2116=================== 15-12-21 21:05:08.919 -05 000000054 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2114, Registering and Extracting C029 L002 T2115, Registering and Extracting C029 L002 T2116=================== 15-12-21 21:05:08.924 -05 000000038 INF: ===================Frame #79=================== 15-12-21 21:05:09.062 -05 000000086 INF: ===================Frame #90=================== 15-12-21 21:05:09.078 -05 000000038 INF: ===================Frame #91=================== 15-12-21 21:05:09.109 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:09.126 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:09.126 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:09.230 -05 000000038 INF: ===================Frame #103=================== 15-12-21 21:05:09.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:09.298 -05 000000086 INF: ===================Frame #108=================== 15-12-21 21:05:09.337 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:09.337 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:09.362 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:09.362 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 21:05:09.381 -05 000000038 INF: ===================Frame #115=================== 15-12-21 21:05:09.495 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:09.533 -05 000000038 INF: ===================Frame #127=================== 15-12-21 21:05:09.547 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:09.547 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:09.656 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:05:09.684 -05 000000038 INF: ===================Frame #139=================== 15-12-21 21:05:09.688 -05 000000086 INF: ===================Frame #139=================== 15-12-21 21:05:09.736 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.046C:A1\r\n 15-12-21 21:05:09.736 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:09.858 -05 000000086 INF: ===================Frame #152=================== 15-12-21 21:05:09.858 -05 000000038 INF: ===================Frame #152=================== 15-12-21 21:05:10.363 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:10.364 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 21:05:10.594 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:05:10.626 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.013C:A1\r\n 15-12-21 21:05:10.626 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:10.691 -05 000000086 INF: ===================Frame #218=================== 15-12-21 21:05:10.975 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:05:11.015 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 39.748C:A1\r\n 15-12-21 21:05:11.015 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:11.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:11.216 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:11.216 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:11.282 -05 000000038 INF: ===================Frame #265=================== 15-12-21 21:05:11.349 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:11.386 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:11.386 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 21:05:11.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:11.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:11.432 -05 000000038 INF: ===================Frame #277=================== 15-12-21 21:05:11.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:11.571 -05 000000086 INF: ===================Frame #288=================== 15-12-21 21:05:11.584 -05 000000038 INF: ===================Frame #289=================== 15-12-21 21:05:11.593 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:11.593 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:11.735 -05 000000038 INF: ===================Frame #301=================== 15-12-21 21:05:11.886 -05 000000038 INF: ===================Frame #313=================== 15-12-21 21:05:11.888 -05 000000086 INF: ===================Frame #313=================== 15-12-21 21:05:12.037 -05 000000038 INF: ===================Frame #325=================== 15-12-21 21:05:12.038 -05 000000086 INF: ===================Frame #325=================== 15-12-21 21:05:12.187 -05 000000038 INF: ===================Frame #337=================== 15-12-21 21:05:12.188 -05 000000086 INF: ===================Frame #337=================== 15-12-21 21:05:12.338 -05 000000038 INF: ===================Frame #349=================== 15-12-21 21:05:12.339 -05 000000086 INF: ===================Frame #349=================== 15-12-21 21:05:12.387 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:12.387 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 21:05:12.490 -05 000000038 INF: ===================Frame #360=================== 15-12-21 21:05:12.490 -05 000000086 INF: ===================Frame #360=================== 15-12-21 21:05:12.899 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:12.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:12.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:12.910 -05 000000086 INF: ===================Frame #394=================== 15-12-21 21:05:13.021 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:13.091 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:13.091 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:13.200 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:13.210 -05 000000086 INF: ===================Frame #417=================== 15-12-21 21:05:13.218 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:13.218 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:13.362 -05 000000086 INF: ===================Frame #429=================== 15-12-21 21:05:13.363 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:13.363 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:13.363 -05 000000062 INF: WaitCommand(5000) end 15-12-21 21:05:13.363 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:13.365 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:13.367 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:13.370 -05 000000040 INF: ===================WaitCommand=================== 15-12-21 21:05:13.371 -05 000000055 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:05:13.371 -05 000000040 INF: WaitCommand(10000) start 15-12-21 21:05:13.372 -05 000000040 INF: ===================Delay 10 of 10 seconds left=================== 15-12-21 21:05:13.372 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:13.414 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:05:13.426 -05 000000038 INF: ===================Frame #434=================== 15-12-21 21:05:13.514 -05 000000086 INF: ===================Frame #441=================== 15-12-21 21:05:13.516 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:13.543 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:05:13.657 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 21:05:13.665 -05 000000086 INF: ===================Frame #453=================== 15-12-21 21:05:13.774 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 21:05:13.774 -05 000000055 INF: Current Position of Pump is: 37440 15-12-21 21:05:13.774 -05 000000055 INF: Dispense Steps 48000 is greater than steps to home syringe 37440, reducing number of steps to 37440 15-12-21 21:05:13.781 -05 000000055 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 21:05:13.823 -05 000000086 INF: ===================Frame #465=================== 15-12-21 21:05:13.875 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD37440R\r 15-12-21 21:05:13.947 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:13.974 -05 000000086 INF: ===================Frame #478=================== 15-12-21 21:05:14.047 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:14.052 -05 000000051 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2114, Registering and Extracting C029 L002 T2115=================== 15-12-21 21:05:14.134 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:14.192 -05 000000038 INF: ===================Frame #495=================== 15-12-21 21:05:14.207 -05 000000048 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105, Registering and Extracting C029 L002 T2114=================== 15-12-21 21:05:14.300 -05 000000086 INF: ===================Frame #504=================== 15-12-21 21:05:14.342 -05 000000038 INF: ===================Frame #507=================== 15-12-21 21:05:14.373 -05 000000040 INF: ===================Delay 9 of 10 seconds left=================== 15-12-21 21:05:14.384 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:14.445 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:14.493 -05 000000038 INF: ===================Frame #519=================== 15-12-21 21:05:14.497 -05 000000086 INF: ===================Frame #519=================== 15-12-21 21:05:14.504 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:14.526 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:14.526 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:14.630 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:14.643 -05 000000038 INF: ===================Frame #531=================== 15-12-21 21:05:14.647 -05 000000086 INF: ===================Frame #531=================== 15-12-21 21:05:14.695 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:14.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:14.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:14.715 -05 000000063 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104, Registering and Extracting C029 L002 T2105=================== 15-12-21 21:05:14.757 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:14.794 -05 000000038 INF: ===================Frame #543=================== 15-12-21 21:05:14.797 -05 000000086 INF: ===================Frame #543=================== 15-12-21 21:05:14.814 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:14.832 -05 000000028 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102, Registering and Extracting C029 L002 T2103, Registering and Extracting C029 L002 T2104=================== 15-12-21 21:05:14.832 -05 000000009 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102=================== 15-12-21 21:05:14.832 -05 000000068 INF: ===================Registering and Extracting C029 L002 T2101, Registering and Extracting C029 L002 T2102=================== 15-12-21 21:05:14.838 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:14.838 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:14.945 -05 000000038 INF: ===================Frame #555=================== 15-12-21 21:05:14.945 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:05:14.947 -05 000000086 INF: ===================Frame #555=================== 15-12-21 21:05:14.954 -05 000000079 INF: ===================Registering and Extracting C029 L002 T2101=================== 15-12-21 21:05:14.961 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.041C:A1\r\n 15-12-21 21:05:14.961 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:14.973 -05 000000054 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:05:15.007 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:15.071 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:15.075 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:05:15.083 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 21:05:15.096 -05 000000038 INF: ===================Frame #567=================== 15-12-21 21:05:15.097 -05 000000086 INF: ===================Frame #567=================== 15-12-21 21:05:15.190 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:05:15.196 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 21:05:15.247 -05 000000038 INF: ===================Frame #578=================== 15-12-21 21:05:15.247 -05 000000086 INF: ===================Frame #579=================== 15-12-21 21:05:15.301 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:05:15.312 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 21:05:15.321 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:15.373 -05 000000040 INF: ===================Delay 8 of 10 seconds left=================== 15-12-21 21:05:15.382 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:15.398 -05 000000086 INF: ===================Frame #590=================== 15-12-21 21:05:15.429 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:05:15.444 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 21:05:15.569 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:05:15.632 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:15.693 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:15.759 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:05:15.774 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 21:05:15.774 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:15.851 -05 000000086 INF: ===================Frame #626=================== 15-12-21 21:05:15.865 -05 000000038 INF: ===================Frame #627=================== 15-12-21 21:05:15.943 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:16.006 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:16.016 -05 000000038 INF: ===================Frame #639=================== 15-12-21 21:05:16.065 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:16.084 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:16.084 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:16.096 -05 000000086 INF: ===================Frame #646=================== 15-12-21 21:05:16.167 -05 000000038 INF: ===================Frame #651=================== 15-12-21 21:05:16.186 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:05:16.211 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 36.324C:A1\r\n 15-12-21 21:05:16.211 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:16.256 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:16.297 -05 000000086 INF: ===================Frame #662=================== 15-12-21 21:05:16.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:16.318 -05 000000038 INF: ===================Frame #663=================== 15-12-21 21:05:16.318 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:16.335 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:16.335 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:16.378 -05 000000040 INF: ===================Delay 7 of 10 seconds left=================== 15-12-21 21:05:16.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:16.461 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:16.461 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:16.468 -05 000000038 INF: ===================Frame #675=================== 15-12-21 21:05:16.487 -05 000000086 INF: ===================Frame #677=================== 15-12-21 21:05:16.568 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:16.618 -05 000000038 INF: ===================Frame #687=================== 15-12-21 21:05:16.629 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:16.637 -05 000000086 INF: ===================Frame #688=================== 15-12-21 21:05:16.732 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 21:05:16.769 -05 000000038 INF: ===================Frame #699=================== 15-12-21 21:05:16.838 -05 000000086 INF: ===================Frame #704=================== 15-12-21 21:05:16.879 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:16.920 -05 000000038 INF: ===================Frame #711=================== 15-12-21 21:05:16.941 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:17.005 -05 000000086 INF: ===================Frame #718=================== 15-12-21 21:05:17.070 -05 000000038 INF: ===================Frame #723=================== 15-12-21 21:05:17.172 -05 000000086 INF: ===================Frame #731=================== 15-12-21 21:05:17.191 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:17.220 -05 000000038 INF: ===================Frame #735=================== 15-12-21 21:05:17.253 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:17.323 -05 000000086 INF: ===================Frame #743=================== 15-12-21 21:05:17.371 -05 000000038 INF: ===================Frame #746=================== 15-12-21 21:05:17.378 -05 000000040 INF: ===================Delay 6 of 10 seconds left=================== 15-12-21 21:05:17.474 -05 000000086 INF: ===================Frame #755=================== 15-12-21 21:05:17.503 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:17.567 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:17.624 -05 000000086 INF: ===================Frame #766=================== 15-12-21 21:05:17.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:17.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:17.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:17.770 -05 000000038 INF: ===================Frame #778=================== 15-12-21 21:05:17.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:17.817 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:17.851 -05 000000086 INF: ===================Frame #784=================== 15-12-21 21:05:17.879 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:17.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:17.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:17.979 -05 000000038 INF: ===================Frame #794=================== 15-12-21 21:05:18.002 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:18.019 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:18.019 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:18.027 -05 000000086 INF: ===================Frame #798=================== 15-12-21 21:05:18.129 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:18.155 -05 000000038 INF: ===================Frame #808=================== 15-12-21 21:05:18.190 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:18.198 -05 000000086 INF: ===================Frame #812=================== 15-12-21 21:05:18.330 -05 000000038 INF: ===================Frame #822=================== 15-12-21 21:05:18.370 -05 000000086 INF: ===================Frame #825=================== 15-12-21 21:05:18.379 -05 000000040 INF: ===================Delay 5 of 10 seconds left=================== 15-12-21 21:05:18.440 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:18.500 -05 000000038 INF: ===================Frame #836=================== 15-12-21 21:05:18.501 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:18.520 -05 000000086 INF: ===================Frame #837=================== 15-12-21 21:05:18.670 -05 000000086 INF: ===================Frame #849=================== 15-12-21 21:05:18.672 -05 000000038 INF: ===================Frame #849=================== 15-12-21 21:05:18.751 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:18.815 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:18.820 -05 000000086 INF: ===================Frame #861=================== 15-12-21 21:05:18.822 -05 000000038 INF: ===================Frame #861=================== 15-12-21 21:05:18.971 -05 000000086 INF: ===================Frame #873=================== 15-12-21 21:05:18.972 -05 000000038 INF: ===================Frame #873=================== 15-12-21 21:05:19.065 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:19.121 -05 000000086 INF: ===================Frame #885=================== 15-12-21 21:05:19.122 -05 000000038 INF: ===================Frame #885=================== 15-12-21 21:05:19.126 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:05:19.126 -05 000000055 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 21:05:19.126 -05 000000055 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 21:05:19.226 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 21:05:19.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:19.252 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:19.269 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:19.269 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:19.272 -05 000000038 INF: ===================Frame #897=================== 15-12-21 21:05:19.272 -05 000000086 INF: ===================Frame #897=================== 15-12-21 21:05:19.352 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:19.372 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:19.379 -05 000000040 INF: ===================Delay 4 of 10 seconds left=================== 15-12-21 21:05:19.392 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:19.392 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:19.422 -05 000000038 INF: ===================Frame #909=================== 15-12-21 21:05:19.423 -05 000000086 INF: ===================Frame #909=================== 15-12-21 21:05:19.437 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 21:05:19.490 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:19.518 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:19.518 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:19.572 -05 000000038 INF: ===================Frame #920=================== 15-12-21 21:05:19.573 -05 000000086 INF: ===================Frame #921=================== 15-12-21 21:05:19.687 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 21:05:19.723 -05 000000086 INF: ===================Frame #932=================== 15-12-21 21:05:19.751 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 21:05:19.752 -05 000000055 INF: ====================================== 15-12-21 21:05:19.830 -05 000000038 INF: ===================Frame #941=================== 15-12-21 21:05:19.980 -05 000000038 INF: ===================Frame #953=================== 15-12-21 21:05:20.134 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:05:20.137 -05 000000038 INF: ===================Frame #965=================== 15-12-21 21:05:20.189 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.000C:A1\r\n 15-12-21 21:05:20.189 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:20.288 -05 000000038 INF: ===================Frame #977=================== 15-12-21 21:05:20.296 -05 000000086 INF: ===================Frame #978=================== 15-12-21 21:05:20.380 -05 000000040 INF: ===================Delay 3 of 10 seconds left=================== 15-12-21 21:05:20.438 -05 000000038 INF: ===================Frame #989=================== 15-12-21 21:05:20.504 -05 000000086 INF: ===================Frame #994=================== 15-12-21 21:05:20.590 -05 000000038 INF: ===================Frame #1001=================== 15-12-21 21:05:20.675 -05 000000086 INF: ===================Frame #1008=================== 15-12-21 21:05:20.740 -05 000000038 INF: ===================Frame #1013=================== 15-12-21 21:05:20.788 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:20.811 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:20.811 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:20.848 -05 000000086 INF: ===================Frame #1021=================== 15-12-21 21:05:20.891 -05 000000038 INF: ===================Frame #1025=================== 15-12-21 21:05:20.916 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 21:05:20.939 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 21:05:20.939 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:20.999 -05 000000086 INF: ===================Frame #1033=================== 15-12-21 21:05:21.041 -05 000000038 INF: ===================Frame #1037=================== 15-12-21 21:05:21.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:21.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:21.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:21.150 -05 000000086 INF: ===================Frame #1045=================== 15-12-21 21:05:21.165 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:21.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:21.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:21.191 -05 000000038 INF: ===================Frame #1048=================== 15-12-21 21:05:21.301 -05 000000086 INF: ===================Frame #1057=================== 15-12-21 21:05:21.313 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 21:05:21.374 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 33.220C:A1\r\n 15-12-21 21:05:21.374 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:21.382 -05 000000040 INF: ===================Delay 2 of 10 seconds left=================== 15-12-21 21:05:21.452 -05 000000086 INF: ===================Frame #1069=================== 15-12-21 21:05:21.511 -05 000000038 INF: ===================Frame #1074=================== 15-12-21 21:05:21.602 -05 000000086 INF: ===================Frame #1081=================== 15-12-21 21:05:21.701 -05 000000038 INF: ===================Frame #1089=================== 15-12-21 21:05:21.752 -05 000000086 INF: ===================Frame #1093=================== 15-12-21 21:05:21.851 -05 000000038 INF: ===================Frame #1101=================== 15-12-21 21:05:21.902 -05 000000086 INF: ===================Frame #1105=================== 15-12-21 21:05:22.001 -05 000000038 INF: ===================Frame #1112=================== 15-12-21 21:05:22.053 -05 000000086 INF: ===================Frame #1117=================== 15-12-21 21:05:22.203 -05 000000038 INF: ===================Frame #1128=================== 15-12-21 21:05:22.203 -05 000000086 INF: ===================Frame #1128=================== 15-12-21 21:05:22.381 -05 000000038 INF: ===================Frame #1142=================== 15-12-21 21:05:22.383 -05 000000040 INF: ===================Delay 1 of 10 seconds left=================== 15-12-21 21:05:22.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:22.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:22.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:22.491 -05 000000086 INF: ===================Frame #1151=================== 15-12-21 21:05:22.545 -05 000000038 INF: ===================Frame #1155=================== 15-12-21 21:05:22.547 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:22.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:22.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:22.642 -05 000000086 INF: ===================Frame #1163=================== 15-12-21 21:05:22.666 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:22.686 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:22.686 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:22.695 -05 000000038 INF: ===================Frame #1167=================== 15-12-21 21:05:22.793 -05 000000086 INF: ===================Frame #1175=================== 15-12-21 21:05:22.845 -05 000000038 INF: ===================Frame #1179=================== 15-12-21 21:05:22.943 -05 000000086 INF: ===================Frame #1187=================== 15-12-21 21:05:22.995 -05 000000038 INF: ===================Frame #1191=================== 15-12-21 21:05:23.093 -05 000000086 INF: ===================Frame #1199=================== 15-12-21 21:05:23.145 -05 000000038 INF: ===================Frame #1203=================== 15-12-21 21:05:23.243 -05 000000086 INF: ===================Frame #1211=================== 15-12-21 21:05:23.295 -05 000000038 INF: ===================Frame #1215=================== 15-12-21 21:05:23.373 -05 000000040 INF: ===================WaitCommand=================== 15-12-21 21:05:23.373 -05 000000040 INF: WaitCommand(10000) end 15-12-21 21:05:23.373 -05 000000040 INF: ====================================== 15-12-21 21:05:23.374 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:23.375 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:23.378 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle, Incorporation=================== 15-12-21 21:05:23.379 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Chemistry CompleteCycle=================== 15-12-21 21:05:23.380 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26=================== 15-12-21 21:05:23.393 -05 000000086 INF: ===================Frame #1223=================== 15-12-21 21:05:23.445 -05 000000038 INF: ===================Frame #1227=================== 15-12-21 21:05:23.456 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:23.457 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Waiting for imaging module...=================== 15-12-21 21:05:23.543 -05 000000086 INF: ===================Frame #1234=================== 15-12-21 21:05:23.595 -05 000000038 INF: ===================Frame #1238=================== 15-12-21 21:05:23.807 -05 000000092 INF: FPGA: Recv TDIYWAIT 15-12-21 21:05:23.808 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:05:23.813 -05 000000025 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 21:05:23.815 -05 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 21:05:23.815 -05 000000055 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 21:05:23.815 -05 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 21:05:23.817 -05 000000055 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 21:05:23.817 -05 000000055 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 21:05:23.817 -05 000000055 INF: Excitation Filter 1: Moving 36 steps 15-12-21 21:05:23.817 -05 000000055 INF: FPGA: Xmit EX1MV 36\n 15-12-21 21:05:23.818 -05 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 21:05:23.818 -05 000000045 INF: Excitation Filter 2: Moving 107 steps 15-12-21 21:05:23.842 -05 000000086 INF: ===================Frame #1250=================== 15-12-21 21:05:23.851 -05 000000045 INF: FPGA: Xmit EX2MV 107\n 15-12-21 21:05:23.858 -05 000000086 INF: Camera complete - got 1250 frames. 15-12-21 21:05:23.859 -05 000000086 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:05:23.918 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 21:05:23.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 21:05:23.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:23.994 -05 000000056 INF: FPGA: Recv EX1MV 15-12-21 21:05:23.994 -05 000000055 INF: Excitation Filter 1: Moved 36 steps in 176.4557 ms 15-12-21 21:05:23.994 -05 000000055 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 176.7721 ms 15-12-21 21:05:23.994 -05 000000055 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 176.8491 ms 15-12-21 21:05:23.995 -05 000000055 INF: ====================================== 15-12-21 21:05:24.041 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 21:05:24.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:24.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:24.160 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 21:05:24.182 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 21:05:24.182 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 21:05:24.203 -05 000000038 INF: ===================Frame #1250=================== 15-12-21 21:05:24.203 -05 000000086 INF: ===================Camera TDI=================== 15-12-21 21:05:24.226 -05 000000086 INF: ====================================== 15-12-21 21:05:24.233 -05 000000038 INF: Camera complete - got 1250 frames. 15-12-21 21:05:24.235 -05 000000038 INF: ===================CameraTDI Cleanup=================== 15-12-21 21:05:24.242 -05 000000041 INF: FPGA: Recv EX2MV 15-12-21 21:05:24.242 -05 000000045 INF: Excitation Filter 2: Moved 107 steps in 424.4779 ms 15-12-21 21:05:24.242 -05 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 424.8023 ms 15-12-21 21:05:24.242 -05 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 426.9875 ms 15-12-21 21:05:24.243 -05 000000045 INF: ====================================== 15-12-21 21:05:24.247 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 21:05:24.250 -05 000000025 INF: ====================================== 15-12-21 21:05:24.379 -05 000000038 INF: ===================Camera TDI=================== 15-12-21 21:05:24.404 -05 000000038 INF: ====================================== 15-12-21 21:05:24.409 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 21:05:24.414 -05 000000078 INF: ====================================== 15-12-21 21:05:24.558 -05 000000061 INF: Y Motor: Moved to 9.0765 after 16854 ms 15-12-21 21:05:24.559 -05 000000061 INF: ====================================== 15-12-21 21:05:24.561 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:24.562 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 21:05:24.567 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:24.567 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 21:05:24.617 -05 000000029 INF: FPGA: Recv TDICLINES 9638 15-12-21 21:05:24.617 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 21:05:24.679 -05 000000041 INF: FPGA: Recv TDIYERD 907647 15-12-21 21:05:24.679 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 21:05:24.741 -05 000000086 INF: FPGA: Recv ZADCR 22374 15-12-21 21:05:24.741 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.085. Y moved -60.304 mm 15-12-21 21:05:24.741 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 21:05:24.803 -05 000000025 INF: FPGA: Recv TDIPULSES 160001 15-12-21 21:05:24.803 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 21:05:24.803 -05 000000057 INF: TDIScan finished after 22187.3391 ms 15-12-21 21:05:24.803 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:05:24.803 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 21:05:24.805 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:24.834 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.104 um 15-12-21 21:05:24.834 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:24.841 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:24.844 -05 000000029 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 21:05:24.844 -05 000000090 INF: ===================Dither Clean Up Command=================== 15-12-21 21:05:24.844 -05 000000029 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 21:05:24.844 -05 000000056 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 21:05:24.844 -05 000000040 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 21:05:24.844 -05 000000029 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 21:05:24.845 -05 000000040 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 21:05:24.851 -05 000000041 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 21:05:24.851 -05 000000086 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:05:24.851 -05 000000041 INF: FPGA: Xmit ZSEL 0\n 15-12-21 21:05:24.854 -05 000000086 INF: ===================LFT:Extracting coords=================== 15-12-21 21:05:24.868 -05 000000092 INF: FPGA: Recv ZSTEP 15-12-21 21:05:24.868 -05 000000092 INF: FPGA: Recv ZSEL 15-12-21 21:05:24.868 -05 000000041 INF: FPGA: Xmit ZDACW 28334\n 15-12-21 21:05:24.869 -05 000000029 INF: ====================================== 15-12-21 21:05:24.884 -05 000000086 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:05:24.885 -05 000000086 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 21:05:24.886 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:24.886 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:24.887 -05 000000084 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:24.887 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:05:24.887 -05 000000038 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:24.887 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:05:24.887 -05 000000084 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:05:24.887 -05 000000038 INF: ===================Lookup Focus Tracking=================== 15-12-21 21:05:24.930 -05 000000061 INF: FPGA: Recv ZDACW 15-12-21 21:05:24.931 -05 000000040 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 21:05:24.931 -05 000000041 INF: ====================================== 15-12-21 21:05:24.932 -05 000000040 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 21:05:24.932 -05 000000056 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 21:05:24.932 -05 000000040 INF: ====================================== 15-12-21 21:05:24.993 -05 000000056 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 21:05:24.994 -05 000000056 INF: ====================================== 15-12-21 21:05:25.179 -05 000000084 INF: LFT found best fwhm score 2.75232 in 233 ms 15-12-21 21:05:25.180 -05 000000084 INF: LFT found good score at index 7837 with fwhm value 2.75232. Next cycle, cycle 30 starting Z position for bottom surface is at -0.088 mm FC:A, C:29,L:2,B 15-12-21 21:05:25.181 -05 000000084 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:25.181 -05 000000084 INF: ====================================== 15-12-21 21:05:25.189 -05 000000078 INF: LFT found best fwhm score 2.703737 in 242 ms 15-12-21 21:05:25.189 -05 000000078 INF: LFT found good score at index 525 with fwhm value 2.703737. Next cycle, cycle 30 starting Z position for bottom surface is at -0.089 mm FC:A, C:29,L:2,B 15-12-21 21:05:25.190 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:25.190 -05 000000078 INF: ====================================== 15-12-21 21:05:25.204 -05 000000038 INF: LFT found best fwhm score 2.895095 in 262 ms 15-12-21 21:05:25.204 -05 000000038 INF: LFT found good score at index 6565 with fwhm value 2.895095. Next cycle, cycle 30 starting Z position for bottom surface is at -0.087 mm FC:A, C:29,L:2,B 15-12-21 21:05:25.205 -05 000000038 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:25.205 -05 000000038 INF: ====================================== 15-12-21 21:05:25.205 -05 000000045 INF: LFT found best fwhm score 2.776702 in 264 ms 15-12-21 21:05:25.206 -05 000000045 INF: LFT found good score at index 6913 with fwhm value 2.776702. Next cycle, cycle 30 starting Z position for bottom surface is at -0.087 mm FC:A, C:29,L:2,B 15-12-21 21:05:25.206 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 21:05:25.206 -05 000000045 INF: ====================================== 15-12-21 21:05:25.213 -05 000000086 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 21:05:25.214 -05 000000086 INF: LFT weighted average best Z for bottom surface is at -0.088mm FC:A, C:29,L:2,B 15-12-21 21:05:25.215 -05 000000086 INF: ====================================== 15-12-21 21:05:25.219 -05 000000090 INF: ====================================== 15-12-21 21:05:25.221 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:25.224 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 21:05:25.224 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:25.224 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 21:05:25.225 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:25.225 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 21:05:25.225 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:25.225 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 21:05:25.225 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 21:05:25.225 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:05:25.226 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:05:25.227 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Waiting for image analysis=================== 15-12-21 21:05:25.227 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 21:05:25.227 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Waiting for imaging module..., Waiting for image analysis=================== 15-12-21 21:05:25.229 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Waiting for imaging module...=================== 15-12-21 21:05:25.229 -05 000000057 INF: Waited 2 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 2, buffer wait time 0 15-12-21 21:05:25.229 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:05:25.230 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:05:25.230 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 21:05:25.230 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 21:05:25.231 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface, Lane 2=================== 15-12-21 21:05:25.233 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging, Bottom Surface=================== 15-12-21 21:05:25.233 -05 000000028 INF: ===================Registering and Extracting C029 L002 T2201, Registering and Extracting C029 L002 T2202, Registering and Extracting C029 L002 T2203, Registering and Extracting C029 L002 T2204, Registering and Extracting C029 L002 T2205=================== 15-12-21 21:05:25.233 -05 000000079 INF: ===================Registering and Extracting C029 L002 T2201, Registering and Extracting C029 L002 T2202, Registering and Extracting C029 L002 T2203, Registering and Extracting C029 L002 T2204, Registering and Extracting C029 L002 T2205, Registering and Extracting C029 L002 T2206=================== 15-12-21 21:05:25.233 -05 000000009 INF: ===================Registering and Extracting C029 L002 T2201, Registering and Extracting C029 L002 T2202, Registering and Extracting C029 L002 T2203, Registering and Extracting C029 L002 T2204, Registering and Extracting C029 L002 T2205, Registering and Extracting C029 L002 T2206=================== 15-12-21 21:05:25.233 -05 000000063 INF: ===================Registering and Extracting C029 L002 T2201, Registering and Extracting C029 L002 T2202, Registering and Extracting C029 L002 T2203, Registering and Extracting C029 L002 T2204, Registering and Extracting C029 L002 T2205, Registering and Extracting C029 L002 T2206=================== 15-12-21 21:05:25.234 -05 000000048 INF: ===================Registering and Extracting C029 L002 T2201, Registering and Extracting C029 L002 T2202, Registering and Extracting C029 L002 T2203, Registering and Extracting C029 L002 T2204, Registering and Extracting C029 L002 T2205, Registering and Extracting C029 L002 T2206, Registering and Extracting C029 L002 T2207=================== 15-12-21 21:05:25.234 -05 000000068 INF: ===================Registering and Extracting C029 L002 T2201, Registering and Extracting C029 L002 T2202, Registering and Extracting C029 L002 T2203, Registering and Extracting C029 L002 T2204, Registering and Extracting C029 L002 T2205=================== 15-12-21 21:05:25.242 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:05:25.243 -05 000000054 INF: ===================Registering and Extracting C029 L002 T2201, Registering and Extracting C029 L002 T2202, Registering and Extracting C029 L002 T2203, Registering and Extracting C029 L002 T2204, Registering and Extracting C029 L002 T2205=================== 15-12-21 21:05:25.243 -05 000000051 INF: ===================Registering and Extracting C029 L002 T2201, Registering and Extracting C029 L002 T2202, Registering and Extracting C029 L002 T2203, Registering and Extracting C029 L002 T2204, Registering and Extracting C029 L002 T2205, Registering and Extracting C029 L002 T2206, Registering and Extracting C029 L002 T2207, Registering and Extracting C029 L002 T2208=================== 15-12-21 21:05:25.243 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:05:25.244 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:05:25.259 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.259 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29, Imaging=================== 15-12-21 21:05:25.259 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Waiting for analysis...=================== 15-12-21 21:05:25.259 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.259 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Waiting for user to shut the door...=================== 15-12-21 21:05:25.259 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.260 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Waiting for imaging module...=================== 15-12-21 21:05:25.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.261 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #29=================== 15-12-21 21:05:25.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Waiting for analysis...=================== 15-12-21 21:05:25.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Waiting for user to shut the door...=================== 15-12-21 21:05:25.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.261 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX)=================== 15-12-21 21:05:25.265 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.265 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging=================== 15-12-21 21:05:25.266 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Top Surface=================== 15-12-21 21:05:25.267 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Top Surface=================== 15-12-21 21:05:25.267 -05 000000062 INF: Compensator: Moving IntoPath 15-12-21 21:05:25.267 -05 000000062 INF: FPGA: Xmit MIOCOMPF\n 15-12-21 21:05:25.470 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 21:05:25.650 -05 000000078 INF: FPGA: Recv MIOCOMPF 15-12-21 21:05:25.650 -05 000000062 INF: Compensator: Moved IntoPath in 383 ms 15-12-21 21:05:25.651 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Top Surface=================== 15-12-21 21:05:25.652 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Top Surface=================== 15-12-21 21:05:25.653 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Top Surface, Aligning=================== 15-12-21 21:05:25.653 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Top Surface, Aligning=================== 15-12-21 21:05:25.654 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #26, Imaging, Top Surface, Aligning=================== 15-12-21 21:05:25.656 -05 000000090 INF: ===================Move Tilt Motor 1=================== 15-12-21 21:05:25.656 -05 000000038 INF: ===================Move Tilt Motor 2=================== 15-12-21 21:05:25.656 -05 000000090 INF: Tilt Motor 1: Moving to 5.3599 mm, started at 5.5245 mm, delta = -0.1646 mm 15-12-21 21:05:25.656 -05 000000090 INF: FPGA: Xmit T1RD\n 15-12-21 21:05:25.656 -05 000000038 INF: Tilt Motor 2: Moving to 5.5090 mm, started at 5.3751 mm, delta = 0.1339 mm 15-12-21 21:05:25.656 -05 000000092 INF: ===================Move Tilt Motor 3=================== 15-12-21 21:05:25.656 -05 000000092 INF: Tilt Motor 3: Moving to 5.5758 mm, started at 5.4102 mm, delta = 0.1656 mm