15-12-21 22:02:56.551 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39=================== 15-12-21 22:02:56.553 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle=================== 15-12-21 22:02:56.553 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:02:56.554 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:02:56.555 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:02:56.555 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:02:56.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:02:56.591 -05 000000028 INF: FPGA: Recv MIOCOMPF 15-12-21 22:02:56.591 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:02:56.591 -05 000000062 INF: Compensator: Moved IntoPath in 371 ms 15-12-21 22:02:56.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface=================== 15-12-21 22:02:56.591 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Selecting Reagent USB (5)=================== 15-12-21 22:02:56.592 -05 000000057 INF: Valve A2: Go to position 5 15-12-21 22:02:56.592 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:02:56.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface=================== 15-12-21 22:02:56.593 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Aligning=================== 15-12-21 22:02:56.593 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Aligning=================== 15-12-21 22:02:56.594 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Aligning=================== 15-12-21 22:02:56.603 -05 000000081 INF: ===================Move Tilt Motor 2=================== 15-12-21 22:02:56.603 -05 000000084 INF: ===================Move Tilt Motor 1=================== 15-12-21 22:02:56.603 -05 000000009 INF: ===================Move Tilt Motor 3=================== 15-12-21 22:02:56.603 -05 000000081 INF: Tilt Motor 2: Moving to 5.5090 mm, started at 5.3751 mm, delta = 0.1339 mm 15-12-21 22:02:56.603 -05 000000081 INF: FPGA: Xmit T2RD\n 15-12-21 22:02:56.603 -05 000000009 INF: Tilt Motor 3: Moving to 5.5758 mm, started at 5.4102 mm, delta = 0.1656 mm 15-12-21 22:02:56.604 -05 000000084 INF: Tilt Motor 1: Moving to 5.3599 mm, started at 5.5245 mm, delta = -0.1646 mm 15-12-21 22:02:56.605 -05 000000009 INF: FPGA: Xmit T3RD\n 15-12-21 22:02:56.608 -05 000000084 INF: FPGA: Xmit T1RD\n 15-12-21 22:02:56.656 -05 000000065 INF: FPGA: Recv T2RD 21162 15-12-21 22:02:56.656 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 3\r 15-12-21 22:02:56.656 -05 000000057 INF: Valve A2: 208.314 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:02:56.656 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 3 to 5 15-12-21 22:02:56.656 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW5\r 15-12-21 22:02:56.656 -05 000000065 INF: FPGA: Recv T3RD 21298 15-12-21 22:02:56.656 -05 000000065 INF: FPGA: Recv T1RD 21750 15-12-21 22:02:56.656 -05 000000009 INF: Tilt Motor 3: Encoder: at motor step 3549 + 4/6 15-12-21 22:02:56.656 -05 000000084 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 22:02:56.656 -05 000000081 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 22:02:56.656 -05 000000081 INF: Tilt Motor 2: Moving to 21689 encoder counts 15-12-21 22:02:56.656 -05 000000081 INF: FPGA: Xmit T2MOVETO 21689\n 15-12-21 22:02:56.656 -05 000000009 INF: Tilt Motor 3: Moving to 21952 encoder counts 15-12-21 22:02:56.657 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:02:56.657 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:02:56.657 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:02:56.657 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:02:56.657 -05 000000084 INF: Tilt Motor 1: Moving to 21102 encoder counts 15-12-21 22:02:56.660 -05 000000084 INF: FPGA: Xmit T1MOVETO 21102\n 15-12-21 22:02:56.693 -05 000000009 INF: FPGA: Xmit T3MOVETO 21952\n 15-12-21 22:02:56.865 -05 000000066 INF: FPGA: Recv T2MOVETO 87 15-12-21 22:02:56.865 -05 000000081 INF: Tilt Motor 2: To move from 5.375 to 5.509 (0.134 mm) should take 88 steps, but required 87 steps (0.133 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 22:02:56.865 -05 000000081 INF: FPGA: Xmit T2RD\n 15-12-21 22:02:56.901 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:02:56.930 -05 000000056 INF: FPGA: Recv T2RD 21683 15-12-21 22:02:56.930 -05 000000056 INF: FPGA: Recv T1MOVETO 107 15-12-21 22:02:56.930 -05 000000084 INF: Tilt Motor 1: To move from 5.525 to 5.360 (-0.165 mm) should take 108 steps, but required 107 steps (0.163 mm). Slippage = -0.002 mm (0.01%) 15-12-21 22:02:56.930 -05 000000084 INF: FPGA: Xmit T1RD\n 15-12-21 22:02:56.930 -05 000000081 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 22:02:56.932 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.768C:A1\r\n 15-12-21 22:02:56.932 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:02:56.932 -05 000000081 INF: FPGA: Xmit T2RD\n 15-12-21 22:02:56.991 -05 000000011 INF: FPGA: Recv T1RD 21108 15-12-21 22:02:56.991 -05 000000011 INF: FPGA: Recv T2RD 21683 15-12-21 22:02:56.991 -05 000000011 INF: FPGA: Recv T3MOVETO 108 15-12-21 22:02:56.991 -05 000000009 INF: Tilt Motor 3: To move from 5.410 to 5.576 (0.166 mm) should take 109 steps, but required 108 steps (0.165 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 22:02:56.991 -05 000000009 INF: FPGA: Xmit T3RD\n 15-12-21 22:02:56.992 -05 000000081 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 22:02:56.992 -05 000000084 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 22:02:56.994 -05 000000081 INF: FPGA: Xmit T2RD\n 15-12-21 22:02:56.996 -05 000000084 INF: FPGA: Xmit T1RD\n 15-12-21 22:02:57.057 -05 000000024 INF: FPGA: Recv T3RD 21946 15-12-21 22:02:57.057 -05 000000024 INF: FPGA: Recv T2RD 21683 15-12-21 22:02:57.057 -05 000000024 INF: FPGA: Recv T1RD 21108 15-12-21 22:02:57.057 -05 000000084 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 22:02:57.058 -05 000000084 INF: FPGA: Xmit T1RD\n 15-12-21 22:02:57.058 -05 000000081 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 22:02:57.058 -05 000000081 INF: Tilt Motor 2: After move to 5.5090, error = -0.0015, min/max error = -0.0015/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:02:57.058 -05 000000081 INF: Tilt Motor 2: Moved to 5.5075 after 454.9571 ms 15-12-21 22:02:57.058 -05 000000009 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 22:02:57.058 -05 000000081 INF: ====================================== 15-12-21 22:02:57.060 -05 000000009 INF: FPGA: Xmit T3RD\n 15-12-21 22:02:57.115 -05 000000063 INF: FPGA: Recv T1RD 21108 15-12-21 22:02:57.115 -05 000000063 INF: FPGA: Recv T3RD 21946 15-12-21 22:02:57.115 -05 000000009 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 22:02:57.115 -05 000000009 INF: FPGA: Xmit T3RD\n 15-12-21 22:02:57.115 -05 000000084 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 22:02:57.115 -05 000000084 INF: Tilt Motor 1: After move to 5.3599, error = 0.0015, min/max error = -0.0015/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:02:57.115 -05 000000084 INF: Tilt Motor 1: Moved to 5.3614 after 511.6533 ms 15-12-21 22:02:57.116 -05 000000084 INF: ====================================== 15-12-21 22:02:57.197 -05 000000054 INF: FPGA: Recv T3RD 21946 15-12-21 22:02:57.197 -05 000000009 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 22:02:57.197 -05 000000009 INF: Tilt Motor 3: After move to 5.5758, error = -0.0015, min/max error = -0.0015/0.0009, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:02:57.197 -05 000000009 INF: Tilt Motor 3: Moved to 5.5743 after 593.7185 ms 15-12-21 22:02:57.198 -05 000000009 INF: ====================================== 15-12-21 22:02:57.200 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Aligning=================== 15-12-21 22:02:57.238 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Aligning=================== 15-12-21 22:02:57.239 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface=================== 15-12-21 22:02:57.240 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface=================== 15-12-21 22:02:57.257 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 22:02:57.257 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:02:57.258 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:02:57.258 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:02:57.299 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:02:57.300 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:02:57.301 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:02:57.340 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:02:57.341 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:02:57.342 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:02:57.344 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:02:57.344 -05 000000062 INF: Compensator: Remaining IntoPath 15-12-21 22:02:57.366 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:02:57.486 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:02:57.495 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:02:57.496 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:02:57.595 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:02:57.595 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:02:57.595 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:02:57.595 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -107.7 um, section = A_1 15-12-21 22:02:57.600 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:02:57.601 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:02:57.603 -05 000000065 INF: ===================MoveEmissionFilters=================== 15-12-21 22:02:57.603 -05 000000078 INF: ===================Move X,Y=================== 15-12-21 22:02:57.603 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:02:57.604 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:02:57.604 -05 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:02:57.604 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:02:57.605 -05 000000078 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:02:57.605 -05 000000011 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:02:57.605 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:02:57.606 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:02:57.606 -05 000000048 INF: ===================Move X Motor without settling=================== 15-12-21 22:02:57.606 -05 000000048 INF: X Motor: Xmit PR VM\n 15-12-21 22:02:57.606 -05 000000036 INF: ===================Move Y Motor without settling=================== 15-12-21 22:02:57.606 -05 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:02:57.606 -05 000000036 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:02:57.607 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:02:57.607 -05 000000011 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:02:57.650 -05 000000036 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:02:57.651 -05 000000061 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:02:57.651 -05 000000056 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:02:57.652 -05 000000036 INF: Y Motor: Xmit 1G\n 15-12-21 22:02:57.652 -05 000000009 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:02:57.652 -05 000000025 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:02:57.652 -05 000000061 INF: ====================================== 15-12-21 22:02:57.652 -05 000000025 INF: Z Motor: Moving to -0.1693 mm, started at -0.1077 mm 15-12-21 22:02:57.652 -05 000000054 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:02:57.652 -05 000000025 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:02:57.652 -05 000000038 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:02:57.652 -05 000000049 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:02:57.652 -05 000000028 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:02:57.652 -05 000000009 INF: ====================================== 15-12-21 22:02:57.652 -05 000000054 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:02:57.653 -05 000000089 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:02:57.653 -05 000000048 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:02:57.653 -05 000000048 INF: X Motor: Xmit PR VI\n 15-12-21 22:02:57.653 -05 000000028 INF: ====================================== 15-12-21 22:02:57.653 -05 000000089 INF: ====================================== 15-12-21 22:02:57.654 -05 000000054 INF: ====================================== 15-12-21 22:02:57.654 -05 000000056 INF: ====================================== 15-12-21 22:02:57.655 -05 000000049 INF: ====================================== 15-12-21 22:02:57.655 -05 000000066 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:02:57.656 -05 000000038 INF: ====================================== 15-12-21 22:02:57.656 -05 000000011 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:02:57.656 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:02:57.689 -05 000000066 INF: ====================================== 15-12-21 22:02:57.690 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:02:57.690 -05 000000087 INF: ====================================== 15-12-21 22:02:57.691 -05 000000011 INF: ====================================== 15-12-21 22:02:57.692 -05 000000063 INF: ====================================== 15-12-21 22:02:57.694 -05 000000065 INF: ====================================== 15-12-21 22:02:57.728 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:02:57.728 -05 000000024 INF: FPGA: Recv ZTRG 15-12-21 22:02:57.728 -05 000000025 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:02:57.744 -05 000000036 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:02:57.806 -05 000000048 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:02:57.807 -05 000000048 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:02:57.807 -05 000000036 INF: Y Motor: Recv 1G\r\n 15-12-21 22:02:57.807 -05 000000048 INF: X Motor: Moving to 75.9620 mm @15.000 mm/sec, started at 17.9380 mm 15-12-21 22:02:57.807 -05 000000089 INF: FPGA: Recv ZYT 15-12-21 22:02:57.823 -05 000000025 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:02:57.823 -05 000000025 INF: FPGA: Xmit ZMV 44372\n 15-12-21 22:02:57.823 -05 000000048 INF: X Motor: Xmit MA 6948\n 15-12-21 22:02:57.824 -05 000000036 INF: Y Motor: Xmit 1D\n 15-12-21 22:02:57.825 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:02:57.825 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:02:57.907 -05 000000036 INF: Y Motor: Recv 1D\r\n 15-12-21 22:02:57.907 -05 000000054 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 22:02:57.907 -05 000000054 INF: FPGA: Recv ZMV 15-12-21 22:02:57.907 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 22:02:57.907 -05 000000025 INF: Z Motor: MoveAndTrigger 'ZMV' command took 83.7365 ms 15-12-21 22:02:57.907 -05 000000025 INF: FPGA: Xmit ZDACR\n 15-12-21 22:02:57.910 -05 000000036 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:02:57.938 -05 000000048 INF: X Motor: Recv MA 6948\r\n> 15-12-21 22:02:57.938 -05 000000036 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:02:57.939 -05 000000048 INF: X Motor: WaitUntilStopped 63868 15-12-21 22:02:57.990 -05 000000028 INF: FPGA: Recv ZDACR 44372 15-12-21 22:02:58.003 -05 000000025 INF: Z Motor: MoveAndTrigger took 350.9548 ms w/comms 15-12-21 22:02:58.003 -05 000000025 INF: Z Motor: After move to -0.1693, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:02:58.003 -05 000000025 INF: Z Motor: MoveAbsStepped took 351.0963 ms 15-12-21 22:02:58.004 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:02:58.127 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:02:58.165 -05 000000037 INF: ===================TDI Scan Setup=================== 15-12-21 22:02:58.166 -05 000000041 INF: ===================Camera Arm TDI=================== 15-12-21 22:02:58.181 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:02:58.196 -05 000000037 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:02:58.197 -05 000000037 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:02:58.197 -05 000000037 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:02:58.212 -05 000000028 INF: FPGA: Recv ZSEL 15-12-21 22:02:58.212 -05 000000037 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:02:58.217 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:02:58.306 -05 000000037 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:02:58.307 -05 000000037 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:02:58.307 -05 000000037 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:02:58.352 -05 000000024 INF: FPGA: Recv ZSTEP 15-12-21 22:02:58.360 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:02:58.362 -05 000000037 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:02:58.363 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:02:58.365 -05 000000037 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:02:58.365 -05 000000037 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:02:58.365 -05 000000037 INF: Z Motor: Arming to move to -0.1293 mm 15-12-21 22:02:58.365 -05 000000037 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:02:58.421 -05 000000056 INF: FPGA: Recv ZYT 15-12-21 22:02:58.421 -05 000000037 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1347239 enc / 13.472 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:02:58.421 -05 000000037 INF: FPGA: Xmit ZARM 33886\n 15-12-21 22:02:58.473 -05 000000081 INF: FPGA: Recv ZARM 15-12-21 22:02:58.473 -05 000000037 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 52.0389 ms 15-12-21 22:02:58.473 -05 000000037 INF: Z Motor: ArmAbsStepped took 108.5269 ms 15-12-21 22:02:58.475 -05 000000037 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:02:58.478 -05 000000037 INF: ===================TDI Scan Setup=================== 15-12-21 22:02:58.482 -05 000000037 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:02:58.489 -05 000000037 INF: ===================TDI Scan Setup=================== 15-12-21 22:02:58.496 -05 000000037 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:02:58.500 -05 000000037 INF: ===================TDI Scan Setup=================== 15-12-21 22:02:58.502 -05 000000037 INF: ====================================== 15-12-21 22:02:58.694 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:02:58.710 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:02:58.710 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:02:58.818 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:02:58.818 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:02:58.818 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 22:02:58.821 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:02:58.834 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:02:58.834 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:02:58.879 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:02:58.893 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:02:58.941 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:02:58.958 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:02:58.958 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:02:58.983 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:02:59.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:02:59.068 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:02:59.068 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 22:02:59.068 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:02:59.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:02:59.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:02:59.168 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P7680R\r 15-12-21 22:02:59.255 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:02:59.355 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:02:59.443 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:02:59.693 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:02:59.753 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:02:59.779 -05 000000041 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:02:59.779 -05 000000041 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:02:59.779 -05 000000041 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:03:00.004 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:00.067 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:00.317 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:00.379 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:00.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:00.469 -05 000000051 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2208=================== 15-12-21 22:03:00.491 -05 000000040 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206=================== 15-12-21 22:03:00.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:00.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:00.554 -05 000000020 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2209, Registering and Extracting C038 L002 T2210=================== 15-12-21 22:03:00.555 -05 000000044 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2209, Registering and Extracting C038 L002 T2210=================== 15-12-21 22:03:00.621 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:00.629 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:00.643 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:00.643 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:00.690 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:00.794 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:00.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:00.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:00.940 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:00.970 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:00.995 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:01.032 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 27.617C:A1\r\n 15-12-21 22:03:01.032 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:01.034 -05 000000060 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2209=================== 15-12-21 22:03:01.075 -05 000000088 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206=================== 15-12-21 22:03:01.107 -05 000000082 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2211, Registering and Extracting C038 L002 T2212=================== 15-12-21 22:03:01.107 -05 000000034 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2211, Registering and Extracting C038 L002 T2212=================== 15-12-21 22:03:01.220 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:01.247 -05 000000036 INF: Y Motor: Moved to 70.6887 after 3309 ms 15-12-21 22:03:01.248 -05 000000036 INF: ====================================== 15-12-21 22:03:01.329 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:01.336 -05 000000077 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2211=================== 15-12-21 22:03:01.369 -05 000000041 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:03:01.369 -05 000000041 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:03:01.370 -05 000000041 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:03:01.373 -05 000000041 INF: ====================================== 15-12-21 22:03:01.376 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:03:01.381 -05 000000025 INF: ====================================== 15-12-21 22:03:01.408 -05 000000047 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2211, Registering and Extracting C038 L002 T2213=================== 15-12-21 22:03:01.596 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:01.657 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:01.658 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 22:03:01.769 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:03:01.812 -05 000000031 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206, Registering and Extracting C038 L002 T2211=================== 15-12-21 22:03:01.846 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 22:03:01.846 -05 000000057 INF: Current Position of Pump is: 7680 15-12-21 22:03:01.846 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:03:01.855 -05 000000027 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2206=================== 15-12-21 22:03:01.911 -05 000000072 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205=================== 15-12-21 22:03:01.912 -05 000000023 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2214=================== 15-12-21 22:03:01.915 -05 000000079 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2214, Registering and Extracting C038 L002 T2215, Registering and Extracting C038 L002 T2216=================== 15-12-21 22:03:01.915 -05 000000058 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2214, Registering and Extracting C038 L002 T2215, Registering and Extracting C038 L002 T2216=================== 15-12-21 22:03:01.946 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:03:02.022 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:02.179 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:02.248 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:02.252 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:02.314 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.964C:A1\r\n 15-12-21 22:03:02.314 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:02.396 -05 000000048 INF: X Motor: Xmit PR ER\n 15-12-21 22:03:02.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:02.454 -05 000000048 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:03:02.454 -05 000000048 INF: X Motor: Moved to 75.9653 after 4514 ms 15-12-21 22:03:02.455 -05 000000048 INF: ====================================== 15-12-21 22:03:02.480 -05 000000078 INF: ===================Move X,Y=================== 15-12-21 22:03:02.506 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:02.507 -05 000000078 INF: ====================================== 15-12-21 22:03:02.510 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:03:02.511 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:02.545 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:03:02.546 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:02.597 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:02.598 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:02.598 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:02.599 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:03:02.635 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:03:02.636 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:03:02.715 -05 000000025 INF: FPGA: Recv ZFREQCL 15-12-21 22:03:02.716 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:03:02.717 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:02.717 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:03:02.732 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:02.764 -05 000000054 INF: FPGA: Recv TDIYERD 7068855 15-12-21 22:03:02.764 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068855 counts (70.689 mm) 15-12-21 22:03:02.765 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:02.766 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:03:02.766 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:02.767 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:02.768 -05 000000055 INF: ===================TDI FPGA Arm=================== 15-12-21 22:03:02.768 -05 000000084 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:03:02.769 -05 000000084 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:03:02.770 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:02.789 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:03:02.789 -05 000000055 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:03:02.857 -05 000000033 INF: FPGA: Recv TDIYPOS 15-12-21 22:03:02.858 -05 000000084 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:03:02.860 -05 000000084 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:03:02.860 -05 000000084 INF: ====================================== 15-12-21 22:03:02.860 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:02.908 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:03:02.908 -05 000000055 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:03:02.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:02.983 -05 000000009 INF: FPGA: Recv TDIYARM3 15-12-21 22:03:02.984 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:03.028 -05 000000055 INF: ===================TDI FPGA Arm=================== 15-12-21 22:03:03.062 -05 000000055 INF: ====================================== 15-12-21 22:03:03.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:03.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:03.089 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:03.092 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:03.092 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:03.123 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:03.167 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:03.169 -05 000000036 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:03:03.169 -05 000000041 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:03:03.169 -05 000000036 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:03:03.200 -05 000000036 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:03:03.200 -05 000000036 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:03:03.200 -05 000000036 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:03:03.200 -05 000000041 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:03:03.200 -05 000000041 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:03:03.200 -05 000000041 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:03:03.204 -05 000000041 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:03:03.266 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:03:03.282 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:03:03.282 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:03.341 -05 000000009 INF: FPGA: Recv EX1MV 15-12-21 22:03:03.341 -05 000000041 INF: Excitation Filter 1: Moved -36 steps in 141.0731 ms 15-12-21 22:03:03.341 -05 000000041 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 141.2026 ms 15-12-21 22:03:03.341 -05 000000041 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 141.3079 ms 15-12-21 22:03:03.342 -05 000000041 INF: ====================================== 15-12-21 22:03:03.386 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:03.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:03.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:03.575 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:03.591 -05 000000087 INF: FPGA: Recv EX2MV 15-12-21 22:03:03.591 -05 000000036 INF: Excitation Filter 2: Moved -107 steps in 391.5139 ms 15-12-21 22:03:03.591 -05 000000036 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 422.4314 ms 15-12-21 22:03:03.592 -05 000000036 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 422.5921 ms 15-12-21 22:03:03.592 -05 000000036 INF: ====================================== 15-12-21 22:03:03.593 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:03:03.593 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:03.595 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:03.668 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:03.671 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 22:03:03.671 -05 000000087 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:03:03.672 -05 000000036 INF: ===================Move Y Motor without settling=================== 15-12-21 22:03:03.690 -05 000000036 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6887 mm 15-12-21 22:03:03.690 -05 000000054 INF: ===================FPGA Z Wait=================== 15-12-21 22:03:03.690 -05 000000036 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:03:03.690 -05 000000084 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:03:03.690 -05 000000054 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:03:03.690 -05 000000087 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:03:03.690 -05 000000036 INF: Y Motor: Xmit 1G\n 15-12-21 22:03:03.715 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 22:03:03.715 -05 000000049 INF: ===================Camera TDI=================== 15-12-21 22:03:03.720 -05 000000087 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:03:03.727 -05 000000036 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:03:03.730 -05 000000036 INF: Y Motor: Recv 1G\r\n 15-12-21 22:03:03.731 -05 000000036 INF: Y Motor: Xmit 1D\n 15-12-21 22:03:03.783 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:03.794 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:03.795 -05 000000036 INF: Y Motor: Recv 1D\r\n 15-12-21 22:03:03.795 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:03.796 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 22:03:03.796 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:03.796 -05 000000036 INF: Y Motor: Recv *407662\r\n 15-12-21 22:03:03.818 -05 000000036 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:03:03.819 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:03.819 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:03:03.827 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:03:03.828 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°, FC temperature to 60°=================== 15-12-21 22:03:03.922 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:60.00\r 15-12-21 22:03:03.980 -05 000000063 INF: FPGA: Recv ZWAIT 15-12-21 22:03:03.981 -05 000000054 INF: ====================================== 15-12-21 22:03:03.982 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:03:03.982 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:04.093 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:0:1\r 15-12-21 22:03:04.170 -05 000000037 INF: ===================Frame #2=================== 15-12-21 22:03:04.171 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:03:04.171 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:04.177 -05 000000049 INF: ===================Frame #3=================== 15-12-21 22:03:04.284 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:03:04.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:03:04.290 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:03:04.291 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:03:04.298 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:04.299 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:04.308 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:03:04.311 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:04.335 -05 000000037 INF: ===================Frame #15=================== 15-12-21 22:03:04.337 -05 000000049 INF: ===================Frame #15=================== 15-12-21 22:03:04.364 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:04.364 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Selecting Reagent CRM (7)=================== 15-12-21 22:03:04.364 -05 000000057 INF: Valve A2: Go to position 7 15-12-21 22:03:04.364 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:03:04.417 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 22:03:04.417 -05 000000057 INF: Valve A2: 7.760 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:03:04.417 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 5 to 7 15-12-21 22:03:04.417 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW7\r 15-12-21 22:03:04.418 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:03:04.418 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:03:04.555 -05 000000049 INF: ===================Frame #33=================== 15-12-21 22:03:04.555 -05 000000037 INF: ===================Frame #30=================== 15-12-21 22:03:04.705 -05 000000049 INF: ===================Frame #45=================== 15-12-21 22:03:04.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:04.807 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:04.807 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:04.859 -05 000000049 INF: ===================Frame #57=================== 15-12-21 22:03:04.887 -05 000000037 INF: ===================Frame #59=================== 15-12-21 22:03:04.923 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:04.980 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 7\r 15-12-21 22:03:04.980 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:04.980 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:03:04.981 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:04.981 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:05.010 -05 000000049 INF: ===================Frame #69=================== 15-12-21 22:03:05.037 -05 000000037 INF: ===================Frame #71=================== 15-12-21 22:03:05.084 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:05.105 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:03:05.105 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:05.161 -05 000000049 INF: ===================Frame #81=================== 15-12-21 22:03:05.199 -05 000000037 INF: ===================Frame #84=================== 15-12-21 22:03:05.200 -05 000000044 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2214, Registering and Extracting C038 L002 T2215=================== 15-12-21 22:03:05.218 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:05.232 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:05.232 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:05.298 -05 000000020 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205, Registering and Extracting C038 L002 T2214=================== 15-12-21 22:03:05.311 -05 000000049 INF: ===================Frame #93=================== 15-12-21 22:03:05.342 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:03:05.428 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:03:05.428 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:05.464 -05 000000049 INF: ===================Frame #105=================== 15-12-21 22:03:05.508 -05 000000037 INF: ===================Frame #108=================== 15-12-21 22:03:05.559 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:05.608 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:03:05.608 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:05.615 -05 000000049 INF: ===================Frame #117=================== 15-12-21 22:03:05.735 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:05.735 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 22:03:05.735 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:05.749 -05 000000037 INF: ===================Frame #127=================== 15-12-21 22:03:05.765 -05 000000049 INF: ===================Frame #128=================== 15-12-21 22:03:05.791 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:05.801 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:03:05.891 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:03:05.901 -05 000000037 INF: ===================Frame #139=================== 15-12-21 22:03:05.980 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 22:03:05.980 -05 000000057 INF: Current Position of Pump is: 7680 15-12-21 22:03:05.981 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7), Aspirating port PortB=================== 15-12-21 22:03:06.051 -05 000000037 INF: ===================Frame #151=================== 15-12-21 22:03:06.080 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P21120R\r 15-12-21 22:03:06.110 -05 000000049 INF: ===================Frame #156=================== 15-12-21 22:03:06.159 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:06.166 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:06.186 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 25.103C:A1\r\n 15-12-21 22:03:06.186 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:06.201 -05 000000037 INF: ===================Frame #163=================== 15-12-21 22:03:06.266 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:06.295 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:06.307 -05 000000049 INF: ===================Frame #171=================== 15-12-21 22:03:06.351 -05 000000037 INF: ===================Frame #175=================== 15-12-21 22:03:06.457 -05 000000049 INF: ===================Frame #183=================== 15-12-21 22:03:06.482 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:06.495 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:06.495 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:06.501 -05 000000037 INF: ===================Frame #187=================== 15-12-21 22:03:06.549 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:06.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:06.603 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:06.607 -05 000000049 INF: ===================Frame #195=================== 15-12-21 22:03:06.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:06.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:06.651 -05 000000037 INF: ===================Frame #198=================== 15-12-21 22:03:06.662 -05 000000047 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204, Registering and Extracting C038 L002 T2205=================== 15-12-21 22:03:06.703 -05 000000034 INF: ===================Registering and Extracting C038 L002 T2201, Registering and Extracting C038 L002 T2202, Registering and Extracting C038 L002 T2203, Registering and Extracting C038 L002 T2204=================== 15-12-21 22:03:06.722 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:06.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:06.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:06.758 -05 000000049 INF: ===================Frame #207=================== 15-12-21 22:03:06.853 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:06.909 -05 000000049 INF: ===================Frame #219=================== 15-12-21 22:03:06.914 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:06.933 -05 000000037 INF: ===================Frame #221=================== 15-12-21 22:03:07.048 -05 000000023 INF: ===================Registering and Extracting C038 L002 T2201=================== 15-12-21 22:03:07.048 -05 000000082 INF: ===================Registering and Extracting C038 L002 T2201=================== 15-12-21 22:03:07.048 -05 000000058 INF: ===================Registering and Extracting C038 L002 T2201=================== 15-12-21 22:03:07.050 -05 000000079 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:03:07.060 -05 000000049 INF: ===================Frame #231=================== 15-12-21 22:03:07.068 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:03:07.074 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:03:07.083 -05 000000037 INF: ===================Frame #233=================== 15-12-21 22:03:07.161 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:03:07.164 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:07.168 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:03:07.210 -05 000000049 INF: ===================Frame #243=================== 15-12-21 22:03:07.226 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:07.233 -05 000000037 INF: ===================Frame #245=================== 15-12-21 22:03:07.264 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:03:07.272 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:03:07.361 -05 000000049 INF: ===================Frame #255=================== 15-12-21 22:03:07.381 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:03:07.383 -05 000000037 INF: ===================Frame #256=================== 15-12-21 22:03:07.387 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:03:07.443 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:07.476 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:07.488 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:03:07.494 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 24.631C:A1\r\n 15-12-21 22:03:07.494 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:07.512 -05 000000049 INF: ===================Frame #267=================== 15-12-21 22:03:07.538 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:07.602 -05 000000037 INF: ===================Frame #274=================== 15-12-21 22:03:07.663 -05 000000049 INF: ===================Frame #278=================== 15-12-21 22:03:07.784 -05 000000037 INF: ===================Frame #288=================== 15-12-21 22:03:07.788 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:07.852 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:07.970 -05 000000037 INF: ===================Frame #303=================== 15-12-21 22:03:07.977 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:08.035 -05 000000049 INF: ===================Frame #308=================== 15-12-21 22:03:08.055 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:08.055 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:08.102 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:08.122 -05 000000037 INF: ===================Frame #315=================== 15-12-21 22:03:08.163 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:08.166 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:08.178 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:08.178 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:08.240 -05 000000049 INF: ===================Frame #324=================== 15-12-21 22:03:08.272 -05 000000037 INF: ===================Frame #327=================== 15-12-21 22:03:08.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:08.307 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:08.307 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:08.416 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:08.422 -05 000000037 INF: ===================Frame #339=================== 15-12-21 22:03:08.424 -05 000000049 INF: ===================Frame #339=================== 15-12-21 22:03:08.473 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:08.573 -05 000000037 INF: ===================Frame #350=================== 15-12-21 22:03:08.574 -05 000000049 INF: ===================Frame #351=================== 15-12-21 22:03:08.632 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:03:08.723 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:08.724 -05 000000049 INF: ===================Frame #362=================== 15-12-21 22:03:08.786 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:08.827 -05 000000037 INF: ===================Frame #371=================== 15-12-21 22:03:08.922 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:08.929 -05 000000049 INF: ===================Frame #379=================== 15-12-21 22:03:08.978 -05 000000037 INF: ===================Frame #382=================== 15-12-21 22:03:08.990 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.017C:A1\r\n 15-12-21 22:03:08.990 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:09.036 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:09.079 -05 000000049 INF: ===================Frame #390=================== 15-12-21 22:03:09.097 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:09.193 -05 000000037 INF: ===================Frame #399=================== 15-12-21 22:03:09.268 -05 000000049 INF: ===================Frame #405=================== 15-12-21 22:03:09.343 -05 000000037 INF: ===================Frame #411=================== 15-12-21 22:03:09.347 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:09.412 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:09.418 -05 000000049 INF: ===================Frame #417=================== 15-12-21 22:03:09.494 -05 000000037 INF: ===================Frame #423=================== 15-12-21 22:03:09.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:09.551 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:09.551 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:09.568 -05 000000049 INF: ===================Frame #429=================== 15-12-21 22:03:09.644 -05 000000037 INF: ===================Frame #435=================== 15-12-21 22:03:09.659 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:09.662 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:09.718 -05 000000049 INF: ===================Frame #441=================== 15-12-21 22:03:09.722 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:09.738 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:09.738 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:09.795 -05 000000037 INF: ===================Frame #447=================== 15-12-21 22:03:09.844 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:09.864 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:09.864 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:09.868 -05 000000049 INF: ===================Frame #453=================== 15-12-21 22:03:09.945 -05 000000037 INF: ===================Frame #459=================== 15-12-21 22:03:09.972 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:10.018 -05 000000049 INF: ===================Frame #465=================== 15-12-21 22:03:10.036 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:10.095 -05 000000037 INF: ===================Frame #471=================== 15-12-21 22:03:10.169 -05 000000049 INF: ===================Frame #477=================== 15-12-21 22:03:10.245 -05 000000037 INF: ===================Frame #483=================== 15-12-21 22:03:10.286 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:10.320 -05 000000049 INF: ===================Frame #489=================== 15-12-21 22:03:10.345 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:10.395 -05 000000037 INF: ===================Frame #495=================== 15-12-21 22:03:10.471 -05 000000049 INF: ===================Frame #501=================== 15-12-21 22:03:10.546 -05 000000037 INF: ===================Frame #506=================== 15-12-21 22:03:10.595 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:10.622 -05 000000049 INF: ===================Frame #512=================== 15-12-21 22:03:10.659 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:10.909 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:10.955 -05 000000037 INF: ===================Frame #539=================== 15-12-21 22:03:10.971 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:11.044 -05 000000049 INF: ===================Frame #546=================== 15-12-21 22:03:11.105 -05 000000037 INF: ===================Frame #551=================== 15-12-21 22:03:11.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:11.175 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:11.175 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:11.221 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:11.256 -05 000000037 INF: ===================Frame #563=================== 15-12-21 22:03:11.260 -05 000000049 INF: ===================Frame #563=================== 15-12-21 22:03:11.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:11.284 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:11.301 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:11.301 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:11.406 -05 000000037 INF: ===================Frame #574=================== 15-12-21 22:03:11.408 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:11.410 -05 000000049 INF: ===================Frame #575=================== 15-12-21 22:03:11.424 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 22.738C:A1\r\n 15-12-21 22:03:11.424 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:11.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:11.535 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:11.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:11.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:11.561 -05 000000049 INF: ===================Frame #587=================== 15-12-21 22:03:11.594 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:11.629 -05 000000037 INF: ===================Frame #592=================== 15-12-21 22:03:11.712 -05 000000049 INF: ===================Frame #599=================== 15-12-21 22:03:11.800 -05 000000037 INF: ===================Frame #606=================== 15-12-21 22:03:11.845 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:11.862 -05 000000049 INF: ===================Frame #610=================== 15-12-21 22:03:11.906 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:11.964 -05 000000037 INF: ===================Frame #618=================== 15-12-21 22:03:12.078 -05 000000049 INF: ===================Frame #627=================== 15-12-21 22:03:12.130 -05 000000037 INF: ===================Frame #632=================== 15-12-21 22:03:12.156 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:12.219 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:12.229 -05 000000049 INF: ===================Frame #639=================== 15-12-21 22:03:12.294 -05 000000037 INF: ===================Frame #645=================== 15-12-21 22:03:12.380 -05 000000049 INF: ===================Frame #651=================== 15-12-21 22:03:12.445 -05 000000037 INF: ===================Frame #657=================== 15-12-21 22:03:12.469 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:12.530 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:12.530 -05 000000049 INF: ===================Frame #663=================== 15-12-21 22:03:12.595 -05 000000037 INF: ===================Frame #668=================== 15-12-21 22:03:12.600 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:12.681 -05 000000049 INF: ===================Frame #675=================== 15-12-21 22:03:12.780 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:12.780 -05 000000037 INF: ===================Frame #683=================== 15-12-21 22:03:12.831 -05 000000049 INF: ===================Frame #687=================== 15-12-21 22:03:12.844 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:12.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:12.930 -05 000000037 INF: ===================Frame #695=================== 15-12-21 22:03:12.982 -05 000000049 INF: ===================Frame #699=================== 15-12-21 22:03:12.983 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:12.983 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:13.081 -05 000000037 INF: ===================Frame #707=================== 15-12-21 22:03:13.085 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:13.094 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:13.110 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:13.110 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:13.132 -05 000000049 INF: ===================Frame #711=================== 15-12-21 22:03:13.156 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:13.213 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:13.231 -05 000000037 INF: ===================Frame #719=================== 15-12-21 22:03:13.234 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:13.234 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:13.282 -05 000000049 INF: ===================Frame #723=================== 15-12-21 22:03:13.381 -05 000000037 INF: ===================Frame #730=================== 15-12-21 22:03:13.406 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:13.432 -05 000000049 INF: ===================Frame #735=================== 15-12-21 22:03:13.467 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:13.467 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 22:03:13.567 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:03:13.582 -05 000000049 INF: ===================Frame #746=================== 15-12-21 22:03:13.596 -05 000000037 INF: ===================Frame #748=================== 15-12-21 22:03:13.655 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 22:03:13.655 -05 000000057 INF: Current Position of Pump is: 28800 15-12-21 22:03:13.655 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:03:13.755 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:03:13.781 -05 000000037 INF: ===================Frame #762=================== 15-12-21 22:03:13.841 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:13.890 -05 000000049 INF: ===================Frame #771=================== 15-12-21 22:03:13.941 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:13.948 -05 000000037 INF: ===================Frame #775=================== 15-12-21 22:03:13.965 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:14.040 -05 000000049 INF: ===================Frame #783=================== 15-12-21 22:03:14.091 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:14.098 -05 000000037 INF: ===================Frame #787=================== 15-12-21 22:03:14.107 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:03:14.107 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:14.190 -05 000000049 INF: ===================Frame #794=================== 15-12-21 22:03:14.215 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:14.248 -05 000000037 INF: ===================Frame #799=================== 15-12-21 22:03:14.279 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:14.279 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:14.279 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:03:14.279 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:14.392 -05 000000049 INF: ===================Frame #810=================== 15-12-21 22:03:14.399 -05 000000037 INF: ===================Frame #811=================== 15-12-21 22:03:14.549 -05 000000037 INF: ===================Frame #823=================== 15-12-21 22:03:14.558 -05 000000049 INF: ===================Frame #824=================== 15-12-21 22:03:14.590 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:03:14.607 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:03:14.607 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:14.700 -05 000000037 INF: ===================Frame #835=================== 15-12-21 22:03:14.717 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:14.724 -05 000000049 INF: ===================Frame #837=================== 15-12-21 22:03:14.733 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:14.733 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:14.841 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:14.850 -05 000000037 INF: ===================Frame #847=================== 15-12-21 22:03:14.874 -05 000000049 INF: ===================Frame #849=================== 15-12-21 22:03:14.918 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:03:14.918 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:15.000 -05 000000037 INF: ===================Frame #858=================== 15-12-21 22:03:15.024 -05 000000049 INF: ===================Frame #860=================== 15-12-21 22:03:15.028 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:15.028 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:15.028 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:15.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:15.030 -05 000000057 INF: WaitCommand(5000) start 15-12-21 22:03:15.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 22:03:15.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:15.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:15.148 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:15.168 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:15.168 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:15.241 -05 000000049 INF: ===================Frame #878=================== 15-12-21 22:03:15.277 -05 000000037 INF: ===================Frame #880=================== 15-12-21 22:03:15.409 -05 000000049 INF: ===================Frame #891=================== 15-12-21 22:03:15.450 -05 000000037 INF: ===================Frame #894=================== 15-12-21 22:03:15.560 -05 000000049 INF: ===================Frame #903=================== 15-12-21 22:03:15.612 -05 000000037 INF: ===================Frame #907=================== 15-12-21 22:03:15.712 -05 000000049 INF: ===================Frame #915=================== 15-12-21 22:03:15.762 -05 000000037 INF: ===================Frame #919=================== 15-12-21 22:03:15.862 -05 000000049 INF: ===================Frame #927=================== 15-12-21 22:03:15.912 -05 000000037 INF: ===================Frame #931=================== 15-12-21 22:03:16.012 -05 000000049 INF: ===================Frame #939=================== 15-12-21 22:03:16.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:16.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 22:03:16.062 -05 000000037 INF: ===================Frame #942=================== 15-12-21 22:03:16.162 -05 000000049 INF: ===================Frame #950=================== 15-12-21 22:03:16.256 -05 000000037 INF: ===================Frame #958=================== 15-12-21 22:03:16.381 -05 000000049 INF: ===================Frame #968=================== 15-12-21 22:03:16.396 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:16.416 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:16.416 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:16.421 -05 000000037 INF: ===================Frame #971=================== 15-12-21 22:03:16.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:16.542 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:16.542 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:16.549 -05 000000049 INF: ===================Frame #981=================== 15-12-21 22:03:16.571 -05 000000037 INF: ===================Frame #983=================== 15-12-21 22:03:16.642 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:16.667 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.510C:A1\r\n 15-12-21 22:03:16.667 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:16.699 -05 000000049 INF: ===================Frame #993=================== 15-12-21 22:03:16.721 -05 000000037 INF: ===================Frame #995=================== 15-12-21 22:03:16.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:16.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:16.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:16.849 -05 000000049 INF: ===================Frame #1005=================== 15-12-21 22:03:16.871 -05 000000037 INF: ===================Frame #1006=================== 15-12-21 22:03:17.000 -05 000000049 INF: ===================Frame #1017=================== 15-12-21 22:03:17.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:17.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 22:03:17.066 -05 000000037 INF: ===================Frame #1022=================== 15-12-21 22:03:17.150 -05 000000049 INF: ===================Frame #1029=================== 15-12-21 22:03:17.231 -05 000000037 INF: ===================Frame #1035=================== 15-12-21 22:03:17.300 -05 000000049 INF: ===================Frame #1040=================== 15-12-21 22:03:17.383 -05 000000037 INF: ===================Frame #1047=================== 15-12-21 22:03:17.519 -05 000000049 INF: ===================Frame #1058=================== 15-12-21 22:03:17.533 -05 000000037 INF: ===================Frame #1059=================== 15-12-21 22:03:17.684 -05 000000037 INF: ===================Frame #1071=================== 15-12-21 22:03:17.689 -05 000000049 INF: ===================Frame #1071=================== 15-12-21 22:03:17.776 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:17.788 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 39.353C:A1\r\n 15-12-21 22:03:17.788 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:17.834 -05 000000037 INF: ===================Frame #1083=================== 15-12-21 22:03:17.839 -05 000000049 INF: ===================Frame #1083=================== 15-12-21 22:03:17.984 -05 000000037 INF: ===================Frame #1094=================== 15-12-21 22:03:17.989 -05 000000049 INF: ===================Frame #1095=================== 15-12-21 22:03:18.017 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:18.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:18.031 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:03:18.038 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:18.038 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:18.140 -05 000000049 INF: ===================Frame #1107=================== 15-12-21 22:03:18.141 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:18.164 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:18.164 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:18.215 -05 000000037 INF: ===================Frame #1113=================== 15-12-21 22:03:18.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:18.287 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:18.287 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:18.290 -05 000000049 INF: ===================Frame #1119=================== 15-12-21 22:03:18.365 -05 000000037 INF: ===================Frame #1125=================== 15-12-21 22:03:18.440 -05 000000049 INF: ===================Frame #1130=================== 15-12-21 22:03:18.517 -05 000000037 INF: ===================Frame #1136=================== 15-12-21 22:03:18.682 -05 000000049 INF: ===================Frame #1150=================== 15-12-21 22:03:18.721 -05 000000037 INF: ===================Frame #1153=================== 15-12-21 22:03:18.856 -05 000000049 INF: ===================Frame #1163=================== 15-12-21 22:03:18.871 -05 000000037 INF: ===================Frame #1165=================== 15-12-21 22:03:19.006 -05 000000049 INF: ===================Frame #1175=================== 15-12-21 22:03:19.021 -05 000000037 INF: ===================Frame #1176=================== 15-12-21 22:03:19.031 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:19.031 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:03:19.156 -05 000000049 INF: ===================Frame #1187=================== 15-12-21 22:03:19.207 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:19.218 -05 000000037 INF: ===================Frame #1192=================== 15-12-21 22:03:19.287 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.986C:A1\r\n 15-12-21 22:03:19.287 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:19.307 -05 000000049 INF: ===================Frame #1199=================== 15-12-21 22:03:19.387 -05 000000037 INF: ===================Frame #1205=================== 15-12-21 22:03:19.457 -05 000000049 INF: ===================Frame #1211=================== 15-12-21 22:03:19.513 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:19.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:19.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:19.537 -05 000000037 INF: ===================Frame #1217=================== 15-12-21 22:03:19.607 -05 000000049 INF: ===================Frame #1223=================== 15-12-21 22:03:19.637 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:19.660 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:19.660 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:19.688 -05 000000037 INF: ===================Frame #1229=================== 15-12-21 22:03:19.757 -05 000000049 INF: ===================Frame #1235=================== 15-12-21 22:03:19.760 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:19.787 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:19.787 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:19.838 -05 000000037 INF: ===================Frame #1241=================== 15-12-21 22:03:19.908 -05 000000049 INF: ===================Frame #1247=================== 15-12-21 22:03:19.973 -05 000000063 INF: FPGA: Recv TDIYWAIT 15-12-21 22:03:19.973 -05 000000087 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:03:19.975 -05 000000087 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:03:19.977 -05 000000068 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:03:19.977 -05 000000029 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:03:19.977 -05 000000068 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:03:19.977 -05 000000068 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:03:19.979 -05 000000068 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:03:19.979 -05 000000029 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:03:19.980 -05 000000068 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:03:19.981 -05 000000029 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:03:19.981 -05 000000029 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:03:19.982 -05 000000029 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:03:19.988 -05 000000037 INF: ===================Frame #1250=================== 15-12-21 22:03:20.031 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:20.031 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:20.031 -05 000000057 INF: WaitCommand(5000) end 15-12-21 22:03:20.031 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:20.033 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:20.033 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:20.042 -05 000000064 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:03:20.042 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:20.042 -05 000000055 INF: ===================WaitCommand=================== 15-12-21 22:03:20.043 -05 000000055 INF: WaitCommand(15000) start 15-12-21 22:03:20.043 -05 000000055 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:03:20.058 -05 000000049 INF: ===================Frame #1250=================== 15-12-21 22:03:20.070 -05 000000037 INF: Camera complete - got 1250 frames. 15-12-21 22:03:20.072 -05 000000037 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:03:20.080 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:20.159 -05 000000061 INF: FPGA: Recv EX1MV 15-12-21 22:03:20.159 -05 000000068 INF: Excitation Filter 1: Moved 36 steps in 179.8474 ms 15-12-21 22:03:20.159 -05 000000068 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 182.4341 ms 15-12-21 22:03:20.159 -05 000000068 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 182.5139 ms 15-12-21 22:03:20.160 -05 000000068 INF: ====================================== 15-12-21 22:03:20.180 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:20.202 -05 000000049 INF: Camera complete - got 1250 frames. 15-12-21 22:03:20.204 -05 000000049 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:03:20.269 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:20.344 -05 000000074 INF: FPGA: Recv EX2MV 15-12-21 22:03:20.344 -05 000000029 INF: Excitation Filter 2: Moved 107 steps in 362.7733 ms 15-12-21 22:03:20.344 -05 000000029 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 364.5733 ms 15-12-21 22:03:20.344 -05 000000029 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 364.7614 ms 15-12-21 22:03:20.345 -05 000000029 INF: ====================================== 15-12-21 22:03:20.349 -05 000000087 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:03:20.353 -05 000000087 INF: ====================================== 15-12-21 22:03:20.369 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:03:20.420 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 22:03:20.440 -05 000000037 INF: ====================================== 15-12-21 22:03:20.454 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 22:03:20.454 -05 000000064 INF: Current Position of Pump is: 28800 15-12-21 22:03:20.454 -05 000000064 INF: Dispense Steps 48000 is greater than steps to home syringe 28800, reducing number of steps to 28800 15-12-21 22:03:20.454 -05 000000064 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:03:20.539 -05 000000049 INF: ===================Camera TDI=================== 15-12-21 22:03:20.554 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD28800R\r 15-12-21 22:03:20.561 -05 000000049 INF: ====================================== 15-12-21 22:03:20.567 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 22:03:20.568 -05 000000084 INF: ====================================== 15-12-21 22:03:20.642 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:20.724 -05 000000036 INF: Y Motor: Moved to 9.0764 after 16905 ms 15-12-21 22:03:20.725 -05 000000036 INF: ====================================== 15-12-21 22:03:20.726 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:20.727 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:20.732 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:20.732 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:03:20.742 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:20.782 -05 000000025 INF: FPGA: Recv TDICLINES 12188 15-12-21 22:03:20.782 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:03:20.830 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:20.844 -05 000000048 INF: FPGA: Recv TDIYERD 907644 15-12-21 22:03:20.845 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:03:20.908 -05 000000056 INF: FPGA: Recv ZADCR 38045 15-12-21 22:03:20.908 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.145. Y moved -60.304 mm 15-12-21 22:03:20.909 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:03:20.970 -05 000000036 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:03:20.970 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:03:20.970 -05 000000062 INF: TDIScan finished after 23473.5133 ms 15-12-21 22:03:20.971 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:03:20.971 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:03:20.975 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.003 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.944 um 15-12-21 22:03:21.004 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.007 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.008 -05 000000074 INF: ===================Dither Clean Up Command=================== 15-12-21 22:03:21.008 -05 000000041 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:03:21.008 -05 000000066 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:03:21.008 -05 000000043 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:03:21.008 -05 000000041 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:03:21.012 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:21.012 -05 000000066 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:03:21.013 -05 000000066 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:03:21.017 -05 000000056 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:03:21.017 -05 000000048 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:03:21.017 -05 000000048 INF: ===================LFT:Extracting coords=================== 15-12-21 22:03:21.026 -05 000000056 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:03:21.034 -05 000000009 INF: FPGA: Recv ZSTEP 15-12-21 22:03:21.036 -05 000000066 INF: ====================================== 15-12-21 22:03:21.048 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:21.048 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:21.048 -05 000000055 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:03:21.081 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:21.093 -05 000000036 INF: FPGA: Recv ZSEL 15-12-21 22:03:21.093 -05 000000056 INF: FPGA: Xmit ZDACW 44372\n 15-12-21 22:03:21.096 -05 000000041 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:03:21.098 -05 000000041 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:03:21.098 -05 000000043 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:03:21.099 -05 000000041 INF: ====================================== 15-12-21 22:03:21.129 -05 000000048 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:03:21.131 -05 000000048 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:03:21.132 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:21.132 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:21.132 -05 000000065 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:21.132 -05 000000063 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:03:21.132 -05 000000087 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:21.132 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:03:21.133 -05 000000087 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:03:21.133 -05 000000065 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:03:21.142 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:21.167 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:21.168 -05 000000041 INF: FPGA: Recv ZDACW 15-12-21 22:03:21.170 -05 000000043 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:03:21.171 -05 000000056 INF: ====================================== 15-12-21 22:03:21.171 -05 000000043 INF: ====================================== 15-12-21 22:03:21.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:21.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:21.333 -05 000000065 INF: LFT found best fwhm score 2.683328 in 157 ms 15-12-21 22:03:21.335 -05 000000065 INF: LFT found good score at index 4153 with fwhm value 2.683328. Next cycle, cycle 36 starting Z position for top surface is at -0.175 mm FC:B, C:35,L:1,T 15-12-21 22:03:21.335 -05 000000078 INF: LFT found best fwhm score 2.547668 in 159 ms 15-12-21 22:03:21.335 -05 000000078 INF: LFT found good score at index 6477 with fwhm value 2.547668. Next cycle, cycle 36 starting Z position for top surface is at -0.174 mm FC:B, C:35,L:1,T 15-12-21 22:03:21.335 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:21.335 -05 000000065 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:21.336 -05 000000087 INF: LFT found best fwhm score 2.609189 in 160 ms 15-12-21 22:03:21.336 -05 000000087 INF: LFT found good score at index 5817 with fwhm value 2.609189. Next cycle, cycle 36 starting Z position for top surface is at -0.174 mm FC:B, C:35,L:1,T 15-12-21 22:03:21.337 -05 000000087 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:21.339 -05 000000065 INF: ====================================== 15-12-21 22:03:21.339 -05 000000078 INF: ====================================== 15-12-21 22:03:21.373 -05 000000087 INF: ====================================== 15-12-21 22:03:21.381 -05 000000063 INF: LFT found best fwhm score 2.27247 in 191 ms 15-12-21 22:03:21.381 -05 000000063 INF: LFT found good score at index 3997 with fwhm value 2.27247. Next cycle, cycle 36 starting Z position for top surface is at -0.175 mm FC:B, C:35,L:1,T 15-12-21 22:03:21.390 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:21.424 -05 000000063 INF: ====================================== 15-12-21 22:03:21.425 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:21.495 -05 000000048 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:03:21.505 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:21.505 -05 000000048 INF: LFT weighted average best Z for top surface is at -0.174mm FC:B, C:35,L:1,T 15-12-21 22:03:21.513 -05 000000048 INF: ====================================== 15-12-21 22:03:21.514 -05 000000074 INF: ====================================== 15-12-21 22:03:21.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:21.539 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.556 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:03:21.565 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.565 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:03:21.567 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:21.567 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:21.573 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.574 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:03:21.574 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.574 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:03:21.574 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.575 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:03:21.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:03:21.604 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Waiting for image analysis, Dispensing port PortC, Delay 14 of 15 seconds left=================== 15-12-21 22:03:21.604 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Dispensing port PortC, Delay 14 of 15 seconds left=================== 15-12-21 22:03:21.605 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:03:21.610 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:03:21.612 -05 000000062 INF: Waited 19 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 11, buffer wait time 0 15-12-21 22:03:21.612 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:03:21.613 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:03:21.613 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:21.614 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:03:21.614 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:03:21.641 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.642 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:03:21.642 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:21.642 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -169.3 um, section = A_1 15-12-21 22:03:21.645 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:03:21.650 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:03:21.651 -05 000000065 INF: ===================Move X,Y=================== 15-12-21 22:03:21.651 -05 000000043 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:03:21.652 -05 000000063 INF: ===================MoveEmissionFilters=================== 15-12-21 22:03:21.653 -05 000000065 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:03:21.653 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:03:21.653 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:03:21.653 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:03:21.653 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:03:21.654 -05 000000043 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:03:21.654 -05 000000043 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:03:21.655 -05 000000043 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:03:21.655 -05 000000037 INF: ===================Move Y Motor without settling=================== 15-12-21 22:03:21.655 -05 000000009 INF: ===================Move X Motor without settling=================== 15-12-21 22:03:21.655 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:03:21.655 -05 000000037 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:03:21.655 -05 000000037 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:03:21.655 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:03:21.656 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:03:21.657 -05 000000009 INF: X Motor: Xmit PR VM\n 15-12-21 22:03:21.657 -05 000000037 INF: Y Motor: Xmit 1G\n 15-12-21 22:03:21.657 -05 000000033 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:03:21.657 -05 000000048 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:03:21.658 -05 000000084 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:03:21.658 -05 000000054 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:03:21.658 -05 000000048 INF: ====================================== 15-12-21 22:03:21.658 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:03:21.658 -05 000000054 INF: ====================================== 15-12-21 22:03:21.659 -05 000000043 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:03:21.666 -05 000000078 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:03:21.667 -05 000000038 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:03:21.667 -05 000000087 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:03:21.667 -05 000000033 INF: ====================================== 15-12-21 22:03:21.667 -05 000000049 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:03:21.667 -05 000000087 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:03:21.667 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 22:03:21.667 -05 000000045 INF: ===================Camera Arm TDI=================== 15-12-21 22:03:21.667 -05 000000041 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:03:21.668 -05 000000087 INF: ====================================== 15-12-21 22:03:21.668 -05 000000049 INF: ====================================== 15-12-21 22:03:21.669 -05 000000084 INF: ====================================== 15-12-21 22:03:21.669 -05 000000038 INF: ====================================== 15-12-21 22:03:21.669 -05 000000078 INF: ====================================== 15-12-21 22:03:21.670 -05 000000041 INF: ====================================== 15-12-21 22:03:21.670 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:03:21.671 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:03:21.678 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:21.679 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:03:21.680 -05 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:03:21.682 -05 000000028 INF: ====================================== 15-12-21 22:03:21.682 -05 000000029 INF: ====================================== 15-12-21 22:03:21.682 -05 000000092 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:03:21.682 -05 000000068 INF: ====================================== 15-12-21 22:03:21.683 -05 000000092 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:03:21.684 -05 000000063 INF: ====================================== 15-12-21 22:03:21.687 -05 000000037 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:03:21.688 -05 000000037 INF: Y Motor: Recv 1G\r\n 15-12-21 22:03:21.689 -05 000000037 INF: Y Motor: Xmit 1D\n 15-12-21 22:03:21.753 -05 000000068 INF: FPGA: Recv ZSEL 15-12-21 22:03:21.754 -05 000000037 INF: Y Motor: Recv 1D\r\n 15-12-21 22:03:21.769 -05 000000009 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:03:21.790 -05 000000037 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:03:21.790 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:21.790 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:21.790 -05 000000009 INF: X Motor: Xmit PR VI\n 15-12-21 22:03:21.791 -05 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:03:21.792 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:21.794 -05 000000037 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:03:21.794 -05 000000092 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:03:21.800 -05 000000092 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:03:21.800 -05 000000092 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:03:21.815 -05 000000087 INF: FPGA: Recv ZSTEP 15-12-21 22:03:21.816 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:21.817 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 18.511C:A1\r\n 15-12-21 22:03:21.817 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:21.820 -05 000000092 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:03:21.821 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:21.829 -05 000000092 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:03:21.833 -05 000000079 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103=================== 15-12-21 22:03:21.833 -05 000000011 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103=================== 15-12-21 22:03:21.833 -05 000000034 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104=================== 15-12-21 22:03:21.834 -05 000000023 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1105, Registering and Extracting C035 L001 T1108=================== 15-12-21 22:03:21.835 -05 000000020 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1105, Registering and Extracting C035 L001 T1108=================== 15-12-21 22:03:21.837 -05 000000092 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:03:21.837 -05 000000092 INF: Z Motor: Arming to move to -0.1293 mm 15-12-21 22:03:21.837 -05 000000092 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:03:21.838 -05 000000082 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1105=================== 15-12-21 22:03:21.840 -05 000000047 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1105, Registering and Extracting C035 L001 T1108=================== 15-12-21 22:03:21.845 -05 000000058 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1105, Registering and Extracting C035 L001 T1108=================== 15-12-21 22:03:21.878 -05 000000068 INF: FPGA: Recv ZYT 15-12-21 22:03:21.878 -05 000000092 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907642 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:03:21.878 -05 000000092 INF: FPGA: Xmit ZARM 33886\n 15-12-21 22:03:21.880 -05 000000009 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:03:21.880 -05 000000009 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:03:21.880 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:21.880 -05 000000009 INF: X Motor: Moving to 76.7340 mm @15.000 mm/sec, started at 75.9653 mm 15-12-21 22:03:21.881 -05 000000009 INF: X Motor: Xmit MA 7264\n 15-12-21 22:03:21.949 -05 000000087 INF: FPGA: Recv ZARM 15-12-21 22:03:21.949 -05 000000092 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 70.9515 ms 15-12-21 22:03:21.949 -05 000000092 INF: Z Motor: ArmAbsStepped took 112.1401 ms 15-12-21 22:03:21.950 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:21.951 -05 000000009 INF: X Motor: Recv MA 7264\r\n> 15-12-21 22:03:21.951 -05 000000009 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:03:21.953 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 22:03:21.971 -05 000000092 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:03:21.988 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 22:03:22.022 -05 000000092 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:03:22.025 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 22:03:22.027 -05 000000092 INF: ====================================== 15-12-21 22:03:22.049 -05 000000055 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:03:22.131 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:22.216 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:22.391 -05 000000009 INF: X Motor: Xmit PR ER\n 15-12-21 22:03:22.453 -05 000000009 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:03:22.453 -05 000000009 INF: X Motor: Moved to 76.7344 after 502 ms 15-12-21 22:03:22.454 -05 000000009 INF: ====================================== 15-12-21 22:03:22.467 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:22.523 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:22.852 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:22.908 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:23.022 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:23.050 -05 000000055 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:03:23.094 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 45.647C:A1\r\n 15-12-21 22:03:23.094 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:23.160 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:23.227 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:23.230 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:23.281 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:23.281 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:23.392 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:23.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:23.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:23.452 -05 000000045 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:03:23.452 -05 000000045 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:03:23.452 -05 000000045 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:03:23.480 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:23.544 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:23.588 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:23.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:23.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:23.794 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:23.858 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:24.126 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:24.128 -05 000000055 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:03:24.230 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:24.395 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:24.444 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:03:24.444 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:24.480 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:24.558 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:24.559 -05 000000064 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:03:24.559 -05 000000064 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:03:24.658 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:03:24.728 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:24.838 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:24.907 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:24.914 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:24.967 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:24.967 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:25.100 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:25.129 -05 000000055 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:03:25.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:25.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:25.164 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:25.213 -05 000000064 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:25.218 -05 000000064 INF: ====================================== 15-12-21 22:03:25.258 -05 000000045 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:03:25.258 -05 000000045 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:03:25.258 -05 000000045 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:03:25.260 -05 000000045 INF: ====================================== 15-12-21 22:03:25.260 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:25.262 -05 000000043 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:03:25.263 -05 000000043 INF: ====================================== 15-12-21 22:03:25.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:25.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:25.715 -05 000000037 INF: Y Motor: Moved to 70.6885 after 3923 ms 15-12-21 22:03:25.716 -05 000000037 INF: ====================================== 15-12-21 22:03:25.717 -05 000000065 INF: ===================Move X,Y=================== 15-12-21 22:03:25.719 -05 000000065 INF: ====================================== 15-12-21 22:03:25.727 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:03:25.732 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:25.732 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:03:25.775 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:03:25.776 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:03:25.836 -05 000000065 INF: FPGA: Recv ZFREQCL 15-12-21 22:03:25.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:03:25.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:25.837 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:03:25.902 -05 000000089 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:03:25.902 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:03:25.902 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:25.903 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:25.909 -05 000000036 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:03:25.909 -05 000000045 INF: ===================TDI FPGA Arm=================== 15-12-21 22:03:25.909 -05 000000036 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:03:25.914 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:25.919 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:03:25.919 -05 000000045 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:03:25.963 -05 000000063 INF: FPGA: Recv TDIYPOS 15-12-21 22:03:25.964 -05 000000036 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:03:25.964 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:25.965 -05 000000036 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:03:25.965 -05 000000036 INF: ====================================== 15-12-21 22:03:25.966 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:03:25.966 -05 000000045 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:03:26.025 -05 000000089 INF: FPGA: Recv TDIYARM3 15-12-21 22:03:26.026 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:26.028 -05 000000045 INF: ===================TDI FPGA Arm=================== 15-12-21 22:03:26.035 -05 000000045 INF: ====================================== 15-12-21 22:03:26.039 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:26.043 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:26.044 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:26.055 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:26.077 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:26.095 -05 000000063 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:03:26.095 -05 000000063 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:03:26.096 -05 000000063 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:03:26.096 -05 000000063 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:03:26.098 -05 000000063 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:03:26.098 -05 000000048 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:03:26.101 -05 000000048 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:03:26.101 -05 000000048 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:03:26.101 -05 000000048 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:03:26.101 -05 000000048 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:03:26.129 -05 000000055 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:03:26.272 -05 000000036 INF: FPGA: Recv EX1MV 15-12-21 22:03:26.273 -05 000000048 INF: Excitation Filter 1: Moved -36 steps in 171.6901 ms 15-12-21 22:03:26.273 -05 000000048 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 171.8208 ms 15-12-21 22:03:26.273 -05 000000048 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 171.9205 ms 15-12-21 22:03:26.278 -05 000000048 INF: ====================================== 15-12-21 22:03:26.507 -05 000000065 INF: FPGA: Recv EX2MV 15-12-21 22:03:26.549 -05 000000063 INF: Excitation Filter 2: Moved -107 steps in 453.6675 ms 15-12-21 22:03:26.549 -05 000000063 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 453.8696 ms 15-12-21 22:03:26.550 -05 000000063 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 453.9908 ms 15-12-21 22:03:26.551 -05 000000063 INF: ====================================== 15-12-21 22:03:26.554 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:26.567 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:26.581 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:26.584 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:03:26.584 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 22:03:26.584 -05 000000037 INF: ===================FPGA Z Wait=================== 15-12-21 22:03:26.649 -05 000000037 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:03:26.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:26.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:26.654 -05 000000049 INF: ===================Move Y Motor without settling=================== 15-12-21 22:03:26.655 -05 000000049 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:03:26.656 -05 000000049 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:03:26.656 -05 000000028 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:03:26.656 -05 000000028 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:03:26.658 -05 000000084 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:03:26.662 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 22:03:26.662 -05 000000086 INF: ===================Camera TDI=================== 15-12-21 22:03:26.695 -05 000000049 INF: Y Motor: Xmit 1G\n 15-12-21 22:03:26.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:26.775 -05 000000049 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:03:26.776 -05 000000049 INF: Y Motor: Recv 1G\r\n 15-12-21 22:03:26.777 -05 000000049 INF: Y Motor: Xmit 1D\n 15-12-21 22:03:26.858 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:26.858 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:26.913 -05 000000049 INF: Y Motor: Recv 1D\r\n 15-12-21 22:03:26.914 -05 000000049 INF: Y Motor: Recv *407662\r\n 15-12-21 22:03:26.915 -05 000000049 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:03:26.981 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:27.039 -05 000000063 INF: FPGA: Recv ZWAIT 15-12-21 22:03:27.041 -05 000000037 INF: ====================================== 15-12-21 22:03:27.041 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.181C:A1\r\n 15-12-21 22:03:27.041 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:27.130 -05 000000055 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:03:27.158 -05 000000078 INF: ===================Frame #1=================== 15-12-21 22:03:27.158 -05 000000086 INF: ===================Frame #1=================== 15-12-21 22:03:27.169 -05 000000023 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1105=================== 15-12-21 22:03:27.176 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:27.187 -05 000000079 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104=================== 15-12-21 22:03:27.228 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:27.228 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:27.256 -05 000000044 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1109, Registering and Extracting C035 L001 T1110=================== 15-12-21 22:03:27.256 -05 000000072 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1109, Registering and Extracting C035 L001 T1110=================== 15-12-21 22:03:27.308 -05 000000078 INF: ===================Frame #13=================== 15-12-21 22:03:27.309 -05 000000086 INF: ===================Frame #13=================== 15-12-21 22:03:27.457 -05 000000082 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1109=================== 15-12-21 22:03:27.459 -05 000000078 INF: ===================Frame #25=================== 15-12-21 22:03:27.460 -05 000000086 INF: ===================Frame #25=================== 15-12-21 22:03:27.560 -05 000000031 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1109, Registering and Extracting C035 L001 T1111=================== 15-12-21 22:03:27.610 -05 000000078 INF: ===================Frame #37=================== 15-12-21 22:03:27.610 -05 000000086 INF: ===================Frame #37=================== 15-12-21 22:03:27.760 -05 000000047 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104, Registering and Extracting C035 L001 T1109=================== 15-12-21 22:03:27.761 -05 000000078 INF: ===================Frame #49=================== 15-12-21 22:03:27.761 -05 000000086 INF: ===================Frame #49=================== 15-12-21 22:03:27.812 -05 000000011 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1104=================== 15-12-21 22:03:27.823 -05 000000058 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106=================== 15-12-21 22:03:27.861 -05 000000088 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112=================== 15-12-21 22:03:27.861 -05 000000027 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112, Registering and Extracting C035 L001 T1113=================== 15-12-21 22:03:27.862 -05 000000051 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112, Registering and Extracting C035 L001 T1113, Registering and Extracting C035 L001 T1114=================== 15-12-21 22:03:27.919 -05 000000078 INF: ===================Frame #61=================== 15-12-21 22:03:27.919 -05 000000086 INF: ===================Frame #61=================== 15-12-21 22:03:27.945 -05 000000034 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112, Registering and Extracting C035 L001 T1113=================== 15-12-21 22:03:27.962 -05 000000040 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112, Registering and Extracting C035 L001 T1113, Registering and Extracting C035 L001 T1115=================== 15-12-21 22:03:28.016 -05 000000020 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112, Registering and Extracting C035 L001 T1113=================== 15-12-21 22:03:28.063 -05 000000077 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112, Registering and Extracting C035 L001 T1113, Registering and Extracting C035 L001 T1116=================== 15-12-21 22:03:28.070 -05 000000078 INF: ===================Frame #73=================== 15-12-21 22:03:28.070 -05 000000086 INF: ===================Frame #73=================== 15-12-21 22:03:28.131 -05 000000055 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:03:28.221 -05 000000078 INF: ===================Frame #85=================== 15-12-21 22:03:28.221 -05 000000086 INF: ===================Frame #85=================== 15-12-21 22:03:28.266 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:28.318 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 51.324C:A1\r\n 15-12-21 22:03:28.318 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:28.377 -05 000000078 INF: ===================Frame #97=================== 15-12-21 22:03:28.377 -05 000000086 INF: ===================Frame #97=================== 15-12-21 22:03:28.528 -05 000000078 INF: ===================Frame #109=================== 15-12-21 22:03:28.528 -05 000000086 INF: ===================Frame #109=================== 15-12-21 22:03:28.555 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:28.568 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:28.568 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:28.678 -05 000000078 INF: ===================Frame #121=================== 15-12-21 22:03:28.679 -05 000000086 INF: ===================Frame #121=================== 15-12-21 22:03:28.681 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:28.757 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:28.757 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:28.830 -05 000000086 INF: ===================Frame #133=================== 15-12-21 22:03:28.830 -05 000000078 INF: ===================Frame #133=================== 15-12-21 22:03:28.869 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:28.943 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:28.943 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:28.981 -05 000000086 INF: ===================Frame #145=================== 15-12-21 22:03:28.981 -05 000000078 INF: ===================Frame #145=================== 15-12-21 22:03:29.131 -05 000000078 INF: ===================Frame #157=================== 15-12-21 22:03:29.131 -05 000000086 INF: ===================Frame #157=================== 15-12-21 22:03:29.136 -05 000000055 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:03:29.282 -05 000000078 INF: ===================Frame #169=================== 15-12-21 22:03:29.283 -05 000000086 INF: ===================Frame #169=================== 15-12-21 22:03:29.434 -05 000000078 INF: ===================Frame #181=================== 15-12-21 22:03:29.434 -05 000000086 INF: ===================Frame #181=================== 15-12-21 22:03:29.549 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:29.583 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 22:03:29.583 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:29.585 -05 000000086 INF: ===================Frame #193=================== 15-12-21 22:03:29.585 -05 000000078 INF: ===================Frame #193=================== 15-12-21 22:03:29.736 -05 000000086 INF: ===================Frame #205=================== 15-12-21 22:03:29.736 -05 000000078 INF: ===================Frame #205=================== 15-12-21 22:03:29.886 -05 000000078 INF: ===================Frame #217=================== 15-12-21 22:03:29.887 -05 000000086 INF: ===================Frame #217=================== 15-12-21 22:03:30.037 -05 000000086 INF: ===================Frame #229=================== 15-12-21 22:03:30.038 -05 000000078 INF: ===================Frame #229=================== 15-12-21 22:03:30.136 -05 000000055 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:03:30.188 -05 000000078 INF: ===================Frame #241=================== 15-12-21 22:03:30.188 -05 000000086 INF: ===================Frame #241=================== 15-12-21 22:03:30.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:30.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:30.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:30.313 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:30.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:30.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:30.339 -05 000000086 INF: ===================Frame #253=================== 15-12-21 22:03:30.340 -05 000000078 INF: ===================Frame #253=================== 15-12-21 22:03:30.444 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:30.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:30.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:30.491 -05 000000086 INF: ===================Frame #265=================== 15-12-21 22:03:30.491 -05 000000078 INF: ===================Frame #265=================== 15-12-21 22:03:30.642 -05 000000086 INF: ===================Frame #276=================== 15-12-21 22:03:30.645 -05 000000078 INF: ===================Frame #276=================== 15-12-21 22:03:31.136 -05 000000055 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:03:31.168 -05 000000044 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112, Registering and Extracting C035 L001 T1113=================== 15-12-21 22:03:31.217 -05 000000072 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106, Registering and Extracting C035 L001 T1112=================== 15-12-21 22:03:31.689 -05 000000031 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107, Registering and Extracting C035 L001 T1106=================== 15-12-21 22:03:31.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:31.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:31.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:31.794 -05 000000086 INF: ===================Frame #368=================== 15-12-21 22:03:31.799 -05 000000078 INF: ===================Frame #368=================== 15-12-21 22:03:31.806 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:31.831 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:31.831 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:31.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:31.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:31.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:32.136 -05 000000086 INF: ===================Frame #395=================== 15-12-21 22:03:32.137 -05 000000078 INF: ===================Frame #395=================== 15-12-21 22:03:32.138 -05 000000055 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:03:32.177 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:32.206 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.057C:A1\r\n 15-12-21 22:03:32.206 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:32.287 -05 000000078 INF: ===================Frame #407=================== 15-12-21 22:03:32.287 -05 000000086 INF: ===================Frame #407=================== 15-12-21 22:03:32.363 -05 000000027 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103, Registering and Extracting C035 L001 T1107=================== 15-12-21 22:03:32.399 -05 000000088 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102, Registering and Extracting C035 L001 T1103=================== 15-12-21 22:03:32.438 -05 000000078 INF: ===================Frame #418=================== 15-12-21 22:03:32.438 -05 000000086 INF: ===================Frame #418=================== 15-12-21 22:03:32.706 -05 000000077 INF: ===================Registering and Extracting C035 L001 T1101, Registering and Extracting C035 L001 T1102=================== 15-12-21 22:03:32.736 -05 000000040 INF: ===================Registering and Extracting C035 L001 T1101=================== 15-12-21 22:03:32.738 -05 000000086 INF: ===================Frame #442=================== 15-12-21 22:03:32.739 -05 000000078 INF: ===================Frame #442=================== 15-12-21 22:03:32.811 -05 000000051 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:03:32.873 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:32.881 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:03:32.954 -05 000000078 INF: ===================Frame #459=================== 15-12-21 22:03:32.955 -05 000000086 INF: ===================Frame #459=================== 15-12-21 22:03:32.982 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:32.988 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:03:33.085 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:33.093 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:03:33.106 -05 000000078 INF: ===================Frame #471=================== 15-12-21 22:03:33.106 -05 000000086 INF: ===================Frame #471=================== 15-12-21 22:03:33.138 -05 000000055 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:03:33.181 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:33.189 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:03:33.250 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:33.256 -05 000000078 INF: ===================Frame #483=================== 15-12-21 22:03:33.256 -05 000000086 INF: ===================Frame #483=================== 15-12-21 22:03:33.266 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:33.266 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:33.285 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:33.373 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:33.392 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:33.392 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:33.406 -05 000000078 INF: ===================Frame #495=================== 15-12-21 22:03:33.406 -05 000000086 INF: ===================Frame #495=================== 15-12-21 22:03:33.493 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:33.514 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 56.407C:A1\r\n 15-12-21 22:03:33.514 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:33.557 -05 000000078 INF: ===================Frame #507=================== 15-12-21 22:03:33.557 -05 000000086 INF: ===================Frame #507=================== 15-12-21 22:03:33.624 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:33.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:33.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:33.707 -05 000000078 INF: ===================Frame #519=================== 15-12-21 22:03:33.707 -05 000000086 INF: ===================Frame #519=================== 15-12-21 22:03:33.858 -05 000000078 INF: ===================Frame #531=================== 15-12-21 22:03:33.858 -05 000000086 INF: ===================Frame #531=================== 15-12-21 22:03:34.009 -05 000000078 INF: ===================Frame #543=================== 15-12-21 22:03:34.010 -05 000000086 INF: ===================Frame #543=================== 15-12-21 22:03:34.138 -05 000000055 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:03:34.160 -05 000000078 INF: ===================Frame #555=================== 15-12-21 22:03:34.160 -05 000000086 INF: ===================Frame #555=================== 15-12-21 22:03:34.198 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:03:34.312 -05 000000078 INF: ===================Frame #566=================== 15-12-21 22:03:34.312 -05 000000086 INF: ===================Frame #566=================== 15-12-21 22:03:34.669 -05 000000078 INF: ===================Frame #595=================== 15-12-21 22:03:34.674 -05 000000086 INF: ===================Frame #595=================== 15-12-21 22:03:34.683 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:34.699 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 22:03:34.699 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:34.819 -05 000000078 INF: ===================Frame #607=================== 15-12-21 22:03:34.824 -05 000000086 INF: ===================Frame #607=================== 15-12-21 22:03:34.924 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:34.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:34.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:34.969 -05 000000078 INF: ===================Frame #619=================== 15-12-21 22:03:34.974 -05 000000086 INF: ===================Frame #619=================== 15-12-21 22:03:35.045 -05 000000055 INF: ===================WaitCommand=================== 15-12-21 22:03:35.045 -05 000000055 INF: WaitCommand(15000) end 15-12-21 22:03:35.046 -05 000000055 INF: ====================================== 15-12-21 22:03:35.047 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:35.048 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:35.050 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:35.050 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:35.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:35.088 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:35.097 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:35.124 -05 000000078 INF: ===================Frame #630=================== 15-12-21 22:03:35.127 -05 000000086 INF: ===================Frame #631=================== 15-12-21 22:03:35.143 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:35.146 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Selecting Reagent CWM (8)=================== 15-12-21 22:03:35.146 -05 000000057 INF: Valve A2: Go to position 8 15-12-21 22:03:35.149 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:03:35.200 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 7\r 15-12-21 22:03:35.200 -05 000000057 INF: Valve A2: 30.781 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:03:35.200 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 7 to 8 15-12-21 22:03:35.200 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW8\r 15-12-21 22:03:35.200 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:03:35.200 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:03:35.227 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:35.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:35.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:35.279 -05 000000086 INF: ===================Frame #643=================== 15-12-21 22:03:35.407 -05 000000078 INF: ===================Frame #653=================== 15-12-21 22:03:35.439 -05 000000086 INF: ===================Frame #656=================== 15-12-21 22:03:35.714 -05 000000078 INF: ===================Frame #666=================== 15-12-21 22:03:35.734 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 8\r 15-12-21 22:03:35.760 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:35.769 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:03:35.769 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:35.826 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:03:35.826 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:35.952 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:03:36.010 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:03:36.010 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:36.093 -05 000000078 INF: ===================Frame #707=================== 15-12-21 22:03:36.118 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:36.136 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:03:36.136 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:36.175 -05 000000086 INF: ===================Frame #714=================== 15-12-21 22:03:36.243 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:36.243 -05 000000078 INF: ===================Frame #719=================== 15-12-21 22:03:36.243 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 22:03:36.243 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:36.322 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:36.330 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:03:36.393 -05 000000078 INF: ===================Frame #731=================== 15-12-21 22:03:36.403 -05 000000086 INF: ===================Frame #732=================== 15-12-21 22:03:36.422 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:03:36.510 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:03:36.510 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 22:03:36.511 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:03:36.543 -05 000000078 INF: ===================Frame #743=================== 15-12-21 22:03:36.578 -05 000000086 INF: ===================Frame #746=================== 15-12-21 22:03:36.610 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P4608R\r 15-12-21 22:03:36.615 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:36.636 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:36.636 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:36.693 -05 000000078 INF: ===================Frame #755=================== 15-12-21 22:03:36.695 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:36.740 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:36.747 -05 000000086 INF: ===================Frame #759=================== 15-12-21 22:03:36.760 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:36.760 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:36.795 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:36.844 -05 000000078 INF: ===================Frame #767=================== 15-12-21 22:03:36.861 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:36.884 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:36.885 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:36.885 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:36.899 -05 000000086 INF: ===================Frame #771=================== 15-12-21 22:03:36.995 -05 000000078 INF: ===================Frame #779=================== 15-12-21 22:03:37.049 -05 000000086 INF: ===================Frame #783=================== 15-12-21 22:03:37.134 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:37.146 -05 000000078 INF: ===================Frame #791=================== 15-12-21 22:03:37.194 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:37.200 -05 000000086 INF: ===================Frame #795=================== 15-12-21 22:03:37.298 -05 000000078 INF: ===================Frame #803=================== 15-12-21 22:03:37.309 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:37.320 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 18.511C:A1\r\n 15-12-21 22:03:37.320 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:37.350 -05 000000086 INF: ===================Frame #807=================== 15-12-21 22:03:37.445 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:37.448 -05 000000078 INF: ===================Frame #815=================== 15-12-21 22:03:37.500 -05 000000086 INF: ===================Frame #819=================== 15-12-21 22:03:37.512 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:37.598 -05 000000078 INF: ===================Frame #826=================== 15-12-21 22:03:37.651 -05 000000086 INF: ===================Frame #831=================== 15-12-21 22:03:37.762 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:37.801 -05 000000086 INF: ===================Frame #842=================== 15-12-21 22:03:37.819 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:37.939 -05 000000078 INF: ===================Frame #853=================== 15-12-21 22:03:38.069 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:38.082 -05 000000086 INF: ===================Frame #865=================== 15-12-21 22:03:38.089 -05 000000078 INF: ===================Frame #865=================== 15-12-21 22:03:38.107 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:38.130 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:38.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:38.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:38.233 -05 000000086 INF: ===================Frame #877=================== 15-12-21 22:03:38.234 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:38.239 -05 000000078 INF: ===================Frame #877=================== 15-12-21 22:03:38.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:38.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:38.361 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:38.380 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:38.383 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:38.383 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:38.384 -05 000000086 INF: ===================Frame #889=================== 15-12-21 22:03:38.392 -05 000000078 INF: ===================Frame #889=================== 15-12-21 22:03:38.444 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:38.534 -05 000000086 INF: ===================Frame #900=================== 15-12-21 22:03:38.542 -05 000000078 INF: ===================Frame #901=================== 15-12-21 22:03:38.624 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:38.632 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.893C:A1\r\n 15-12-21 22:03:38.632 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:38.692 -05 000000078 INF: ===================Frame #913=================== 15-12-21 22:03:38.694 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:38.752 -05 000000086 INF: ===================Frame #918=================== 15-12-21 22:03:38.754 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:38.754 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 22:03:38.842 -05 000000078 INF: ===================Frame #925=================== 15-12-21 22:03:38.854 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:03:38.925 -05 000000086 INF: ===================Frame #931=================== 15-12-21 22:03:38.943 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 22:03:38.943 -05 000000057 INF: Current Position of Pump is: 4608 15-12-21 22:03:38.943 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:03:38.993 -05 000000078 INF: ===================Frame #937=================== 15-12-21 22:03:39.043 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:03:39.076 -05 000000086 INF: ===================Frame #943=================== 15-12-21 22:03:39.130 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:39.144 -05 000000078 INF: ===================Frame #949=================== 15-12-21 22:03:39.226 -05 000000086 INF: ===================Frame #955=================== 15-12-21 22:03:39.230 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:39.294 -05 000000078 INF: ===================Frame #961=================== 15-12-21 22:03:39.322 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:39.376 -05 000000086 INF: ===================Frame #967=================== 15-12-21 22:03:39.444 -05 000000078 INF: ===================Frame #972=================== 15-12-21 22:03:39.528 -05 000000086 INF: ===================Frame #979=================== 15-12-21 22:03:39.572 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:39.603 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:39.629 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:39.629 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:39.630 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:03:39.630 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:39.630 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:39.678 -05 000000086 INF: ===================Frame #991=================== 15-12-21 22:03:39.733 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:39.752 -05 000000078 INF: ===================Frame #997=================== 15-12-21 22:03:39.756 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:03:39.756 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:39.829 -05 000000086 INF: ===================Frame #1003=================== 15-12-21 22:03:39.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:39.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:39.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:39.903 -05 000000078 INF: ===================Frame #1009=================== 15-12-21 22:03:39.980 -05 000000086 INF: ===================Frame #1015=================== 15-12-21 22:03:39.985 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:40.054 -05 000000078 INF: ===================Frame #1021=================== 15-12-21 22:03:40.067 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 22:03:40.067 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:40.132 -05 000000086 INF: ===================Frame #1027=================== 15-12-21 22:03:40.169 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:03:40.192 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:03:40.192 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:40.204 -05 000000078 INF: ===================Frame #1032=================== 15-12-21 22:03:40.282 -05 000000086 INF: ===================Frame #1039=================== 15-12-21 22:03:40.292 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:40.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:40.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:40.413 -05 000000078 INF: ===================Frame #1049=================== 15-12-21 22:03:40.418 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:03:40.433 -05 000000086 INF: ===================Frame #1051=================== 15-12-21 22:03:40.441 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:03:40.441 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:40.541 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:40.541 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:40.542 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:40.542 -05 000000057 INF: WaitCommand(5000) start 15-12-21 22:03:40.542 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 22:03:40.563 -05 000000078 INF: ===================Frame #1061=================== 15-12-21 22:03:40.583 -05 000000086 INF: ===================Frame #1062=================== 15-12-21 22:03:40.716 -05 000000078 INF: ===================Frame #1073=================== 15-12-21 22:03:40.866 -05 000000078 INF: ===================Frame #1085=================== 15-12-21 22:03:40.884 -05 000000086 INF: ===================Frame #1086=================== 15-12-21 22:03:41.017 -05 000000078 INF: ===================Frame #1097=================== 15-12-21 22:03:41.056 -05 000000086 INF: ===================Frame #1100=================== 15-12-21 22:03:41.167 -05 000000078 INF: ===================Frame #1109=================== 15-12-21 22:03:41.222 -05 000000086 INF: ===================Frame #1113=================== 15-12-21 22:03:41.318 -05 000000078 INF: ===================Frame #1121=================== 15-12-21 22:03:41.372 -05 000000086 INF: ===================Frame #1125=================== 15-12-21 22:03:41.468 -05 000000078 INF: ===================Frame #1132=================== 15-12-21 22:03:41.522 -05 000000086 INF: ===================Frame #1137=================== 15-12-21 22:03:41.542 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:41.542 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 22:03:41.542 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:41.563 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:41.563 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:41.660 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:41.673 -05 000000086 INF: ===================Frame #1149=================== 15-12-21 22:03:41.691 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:41.691 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:41.724 -05 000000078 INF: ===================Frame #1153=================== 15-12-21 22:03:41.793 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:41.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:41.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:41.824 -05 000000086 INF: ===================Frame #1160=================== 15-12-21 22:03:41.875 -05 000000078 INF: ===================Frame #1165=================== 15-12-21 22:03:42.026 -05 000000078 INF: ===================Frame #1176=================== 15-12-21 22:03:42.046 -05 000000086 INF: ===================Frame #1178=================== 15-12-21 22:03:42.227 -05 000000086 INF: ===================Frame #1192=================== 15-12-21 22:03:42.231 -05 000000078 INF: ===================Frame #1193=================== 15-12-21 22:03:42.381 -05 000000078 INF: ===================Frame #1205=================== 15-12-21 22:03:42.392 -05 000000086 INF: ===================Frame #1205=================== 15-12-21 22:03:42.423 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:42.438 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.314C:A1\r\n 15-12-21 22:03:42.438 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:42.531 -05 000000078 INF: ===================Frame #1216=================== 15-12-21 22:03:42.542 -05 000000086 INF: ===================Frame #1217=================== 15-12-21 22:03:42.543 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:42.543 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 22:03:42.692 -05 000000086 INF: ===================Frame #1229=================== 15-12-21 22:03:42.724 -05 000000078 INF: ===================Frame #1232=================== 15-12-21 22:03:42.844 -05 000000086 INF: ===================Frame #1241=================== 15-12-21 22:03:42.888 -05 000000078 INF: ===================Frame #1245=================== 15-12-21 22:03:42.994 -05 000000086 INF: ===================Frame #1250=================== 15-12-21 22:03:42.998 -05 000000037 INF: FPGA: Recv TDIYWAIT 15-12-21 22:03:42.999 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:03:43.001 -05 000000028 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:03:43.008 -05 000000061 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:03:43.012 -05 000000043 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:03:43.015 -05 000000061 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:03:43.015 -05 000000061 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:03:43.015 -05 000000061 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:03:43.015 -05 000000061 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:03:43.015 -05 000000043 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:03:43.015 -05 000000043 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:03:43.015 -05 000000043 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:03:43.020 -05 000000043 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:03:43.040 -05 000000078 INF: ===================Frame #1250=================== 15-12-21 22:03:43.056 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:43.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:43.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:43.095 -05 000000078 INF: Camera complete - got 1250 frames. 15-12-21 22:03:43.097 -05 000000078 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:03:43.129 -05 000000086 INF: Camera complete - got 1250 frames. 15-12-21 22:03:43.134 -05 000000086 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:03:43.169 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:43.185 -05 000000089 INF: FPGA: Recv EX1MV 15-12-21 22:03:43.186 -05 000000043 INF: Excitation Filter 1: Moved 36 steps in 170.3651 ms 15-12-21 22:03:43.186 -05 000000043 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 170.6402 ms 15-12-21 22:03:43.186 -05 000000043 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 170.7219 ms 15-12-21 22:03:43.186 -05 000000043 INF: ====================================== 15-12-21 22:03:43.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:43.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:43.366 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:43.436 -05 000000087 INF: FPGA: Recv EX2MV 15-12-21 22:03:43.436 -05 000000061 INF: Excitation Filter 2: Moved 107 steps in 421.1508 ms 15-12-21 22:03:43.436 -05 000000061 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 421.254 ms 15-12-21 22:03:43.436 -05 000000061 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 421.3481 ms 15-12-21 22:03:43.437 -05 000000061 INF: ====================================== 15-12-21 22:03:43.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:43.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:43.439 -05 000000049 INF: Y Motor: Moved to 9.0764 after 16522 ms 15-12-21 22:03:43.442 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:03:43.442 -05 000000049 INF: ====================================== 15-12-21 22:03:43.444 -05 000000028 INF: ====================================== 15-12-21 22:03:43.543 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:43.544 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:03:43.662 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 22:03:43.682 -05 000000078 INF: ====================================== 15-12-21 22:03:43.739 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:43.796 -05 000000086 INF: ===================Camera TDI=================== 15-12-21 22:03:43.797 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.028C:A1\r\n 15-12-21 22:03:43.797 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:43.820 -05 000000086 INF: ====================================== 15-12-21 22:03:43.826 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 22:03:43.830 -05 000000084 INF: ====================================== 15-12-21 22:03:43.832 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:43.833 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:43.838 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:43.839 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:03:43.906 -05 000000065 INF: FPGA: Recv TDICLINES 11618 15-12-21 22:03:43.906 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:03:43.966 -05 000000078 INF: FPGA: Recv TDIYERD 907645 15-12-21 22:03:43.966 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:03:44.027 -05 000000041 INF: FPGA: Recv ZADCR 38997 15-12-21 22:03:44.027 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.149. Y moved -60.304 mm 15-12-21 22:03:44.027 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:03:44.089 -05 000000009 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:03:44.089 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:03:44.089 -05 000000062 INF: TDIScan finished after 22473.2026 ms 15-12-21 22:03:44.090 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:03:44.090 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:03:44.091 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.120 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.275 um 15-12-21 22:03:44.120 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.125 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.126 -05 000000022 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:03:44.126 -05 000000065 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:03:44.126 -05 000000092 INF: ===================Dither Clean Up Command=================== 15-12-21 22:03:44.130 -05 000000022 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:03:44.132 -05 000000043 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:03:44.132 -05 000000043 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:03:44.132 -05 000000043 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:03:44.133 -05 000000068 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:03:44.136 -05 000000029 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:03:44.137 -05 000000068 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:03:44.141 -05 000000029 INF: ===================LFT:Extracting coords=================== 15-12-21 22:03:44.153 -05 000000063 INF: FPGA: Recv ZSTEP 15-12-21 22:03:44.153 -05 000000063 INF: FPGA: Recv ZSEL 15-12-21 22:03:44.153 -05 000000068 INF: FPGA: Xmit ZDACW 44372\n 15-12-21 22:03:44.153 -05 000000043 INF: ====================================== 15-12-21 22:03:44.154 -05 000000022 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:03:44.155 -05 000000022 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:03:44.155 -05 000000022 INF: ====================================== 15-12-21 22:03:44.157 -05 000000065 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:03:44.176 -05 000000029 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:03:44.177 -05 000000029 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:03:44.178 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:44.178 -05 000000009 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:44.178 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:03:44.179 -05 000000074 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:44.183 -05 000000009 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:03:44.183 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:44.183 -05 000000074 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:03:44.183 -05 000000086 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:03:44.215 -05 000000081 INF: FPGA: Recv ZDACW 15-12-21 22:03:44.216 -05 000000065 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:03:44.216 -05 000000068 INF: ====================================== 15-12-21 22:03:44.217 -05 000000065 INF: ====================================== 15-12-21 22:03:44.353 -05 000000009 INF: LFT found best fwhm score 2.684265 in 122 ms 15-12-21 22:03:44.353 -05 000000009 INF: LFT found good score at index 8389 with fwhm value 2.684265. Next cycle, cycle 36 starting Z position for top surface is at -0.171 mm FC:B, C:35,L:1,T 15-12-21 22:03:44.353 -05 000000037 INF: LFT found best fwhm score 2.579904 in 123 ms 15-12-21 22:03:44.353 -05 000000037 INF: LFT found good score at index 3969 with fwhm value 2.579904. Next cycle, cycle 36 starting Z position for top surface is at -0.172 mm FC:B, C:35,L:1,T 15-12-21 22:03:44.353 -05 000000009 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:44.353 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:44.354 -05 000000074 INF: LFT found best fwhm score 2.626878 in 124 ms 15-12-21 22:03:44.354 -05 000000074 INF: LFT found good score at index 3877 with fwhm value 2.626878. Next cycle, cycle 36 starting Z position for top surface is at -0.172 mm FC:B, C:35,L:1,T 15-12-21 22:03:44.354 -05 000000074 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:44.354 -05 000000037 INF: ====================================== 15-12-21 22:03:44.354 -05 000000009 INF: ====================================== 15-12-21 22:03:44.354 -05 000000074 INF: ====================================== 15-12-21 22:03:44.358 -05 000000086 INF: LFT found best fwhm score 2.27086 in 128 ms 15-12-21 22:03:44.358 -05 000000086 INF: LFT found good score at index 7109 with fwhm value 2.27086. Next cycle, cycle 36 starting Z position for top surface is at -0.171 mm FC:B, C:35,L:1,T 15-12-21 22:03:44.361 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 22:03:44.362 -05 000000086 INF: ====================================== 15-12-21 22:03:44.364 -05 000000029 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:03:44.365 -05 000000029 INF: LFT weighted average best Z for top surface is at -0.171mm FC:B, C:35,L:1,T 15-12-21 22:03:44.365 -05 000000029 INF: ====================================== 15-12-21 22:03:44.369 -05 000000092 INF: ====================================== 15-12-21 22:03:44.374 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.377 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:03:44.378 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.378 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:03:44.378 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.378 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:03:44.378 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.379 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:03:44.379 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.379 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:03:44.379 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:03:44.381 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left, Waiting for image analysis=================== 15-12-21 22:03:44.381 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:03:44.381 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:03:44.383 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:03:44.383 -05 000000062 INF: Waited 2 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 2, buffer wait time 0 15-12-21 22:03:44.385 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:03:44.385 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:44.386 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:03:44.386 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:03:44.387 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 1=================== 15-12-21 22:03:44.390 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface=================== 15-12-21 22:03:44.410 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:03:44.411 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:03:44.412 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:03:44.419 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:03:44.420 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:03:44.422 -05 000000062 INF: Compensator: Remaining IntoPath 15-12-21 22:03:44.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:03:44.426 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:03:44.536 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:03:44.537 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:03:44.544 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:44.544 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:03:44.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:03:44.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:44.576 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -169.3 um, section = B_1 15-12-21 22:03:44.584 -05 000000066 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203=================== 15-12-21 22:03:44.584 -05 000000038 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203=================== 15-12-21 22:03:44.584 -05 000000077 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203=================== 15-12-21 22:03:44.584 -05 000000040 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204=================== 15-12-21 22:03:44.584 -05 000000051 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205=================== 15-12-21 22:03:44.586 -05 000000027 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206=================== 15-12-21 22:03:44.586 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:03:44.587 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:03:44.587 -05 000000088 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207=================== 15-12-21 22:03:44.588 -05 000000084 INF: ===================MoveEmissionFilters=================== 15-12-21 22:03:44.588 -05 000000049 INF: ===================Move X,Y=================== 15-12-21 22:03:44.589 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:03:44.589 -05 000000031 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207, Registering and Extracting C035 L001 T1208=================== 15-12-21 22:03:44.589 -05 000000064 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:03:44.590 -05 000000049 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:03:44.590 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:03:44.590 -05 000000061 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:03:44.590 -05 000000025 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:03:44.590 -05 000000025 INF: Z Motor: Moving to -0.1728 mm, started at -0.1693 mm 15-12-21 22:03:44.590 -05 000000025 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:03:44.590 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:03:44.591 -05 000000064 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:03:44.591 -05 000000061 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:03:44.592 -05 000000036 INF: ===================Move X Motor without settling=================== 15-12-21 22:03:44.592 -05 000000036 INF: X Motor: Xmit PR VM\n 15-12-21 22:03:44.592 -05 000000063 INF: ===================Move Y Motor without settling=================== 15-12-21 22:03:44.592 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:03:44.592 -05 000000063 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:03:44.592 -05 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:03:44.592 -05 000000043 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:03:44.592 -05 000000063 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:03:44.592 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:03:44.593 -05 000000028 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:03:44.593 -05 000000087 INF: ====================================== 15-12-21 22:03:44.593 -05 000000092 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:03:44.593 -05 000000028 INF: ====================================== 15-12-21 22:03:44.593 -05 000000009 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:03:44.594 -05 000000054 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:03:44.594 -05 000000092 INF: ====================================== 15-12-21 22:03:44.594 -05 000000009 INF: ====================================== 15-12-21 22:03:44.619 -05 000000043 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:03:44.619 -05 000000054 INF: ====================================== 15-12-21 22:03:44.620 -05 000000043 INF: ====================================== 15-12-21 22:03:44.620 -05 000000063 INF: Y Motor: Xmit 1G\n 15-12-21 22:03:44.620 -05 000000061 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:03:44.628 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:03:44.628 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:03:44.628 -05 000000064 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:03:44.628 -05 000000061 INF: ====================================== 15-12-21 22:03:44.634 -05 000000048 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:03:44.634 -05 000000029 INF: ====================================== 15-12-21 22:03:44.634 -05 000000089 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:03:44.634 -05 000000064 INF: ====================================== 15-12-21 22:03:44.635 -05 000000048 INF: ====================================== 15-12-21 22:03:44.635 -05 000000089 INF: ====================================== 15-12-21 22:03:44.641 -05 000000086 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:03:44.647 -05 000000086 INF: ====================================== 15-12-21 22:03:44.652 -05 000000084 INF: ====================================== 15-12-21 22:03:44.655 -05 000000022 INF: FPGA: Recv ZTRG 15-12-21 22:03:44.655 -05 000000025 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:03:44.656 -05 000000063 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:03:44.658 -05 000000063 INF: Y Motor: Recv 1G\r\n 15-12-21 22:03:44.659 -05 000000063 INF: Y Motor: Xmit 1D\n 15-12-21 22:03:44.717 -05 000000078 INF: FPGA: Recv ZYT 15-12-21 22:03:44.717 -05 000000025 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:03:44.717 -05 000000025 INF: FPGA: Xmit ZMV 45304\n 15-12-21 22:03:44.718 -05 000000063 INF: Y Motor: Recv 1D\r\n 15-12-21 22:03:44.719 -05 000000063 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:03:44.719 -05 000000036 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:03:44.719 -05 000000036 INF: X Motor: Xmit PR VI\n 15-12-21 22:03:44.720 -05 000000063 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:03:44.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:44.777 -05 000000033 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 22:03:44.777 -05 000000033 INF: FPGA: Recv ZMV 15-12-21 22:03:44.777 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 22:03:44.777 -05 000000025 INF: Z Motor: MoveAndTrigger 'ZMV' command took 59.8079 ms 15-12-21 22:03:44.777 -05 000000025 INF: FPGA: Xmit ZDACR\n 15-12-21 22:03:44.778 -05 000000036 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:03:44.778 -05 000000036 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:03:44.778 -05 000000036 INF: X Motor: Moving to 80.2570 mm @15.000 mm/sec, started at 76.7344 mm 15-12-21 22:03:44.778 -05 000000036 INF: X Motor: Xmit MA 8707\n 15-12-21 22:03:44.778 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:44.778 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:44.838 -05 000000041 INF: FPGA: Recv ZDACR 45304 15-12-21 22:03:44.839 -05 000000025 INF: Z Motor: MoveAndTrigger took 248.762 ms w/comms 15-12-21 22:03:44.839 -05 000000025 INF: Z Motor: After move to -0.1728, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:03:44.839 -05 000000025 INF: Z Motor: MoveAbsStepped took 248.8624 ms 15-12-21 22:03:44.839 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:03:44.840 -05 000000036 INF: X Motor: Recv MA 8707\r\n> 15-12-21 22:03:44.840 -05 000000036 INF: X Motor: WaitUntilStopped 60235 15-12-21 22:03:44.855 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:03:44.856 -05 000000043 INF: ===================TDI Scan Setup=================== 15-12-21 22:03:44.856 -05 000000074 INF: ===================Camera Arm TDI=================== 15-12-21 22:03:44.875 -05 000000043 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:44.889 -05 000000043 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:03:44.890 -05 000000043 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:03:44.890 -05 000000043 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:03:44.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:44.965 -05 000000045 INF: FPGA: Recv ZSEL 15-12-21 22:03:44.966 -05 000000043 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:03:44.966 -05 000000043 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:44.967 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:44.967 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:44.983 -05 000000043 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:03:44.983 -05 000000043 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:03:44.983 -05 000000043 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:03:45.027 -05 000000068 INF: FPGA: Recv ZSTEP 15-12-21 22:03:45.029 -05 000000043 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:45.033 -05 000000043 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:03:45.053 -05 000000043 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:45.060 -05 000000043 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:03:45.060 -05 000000043 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:03:45.061 -05 000000043 INF: Z Motor: Arming to move to -0.1328 mm 15-12-21 22:03:45.061 -05 000000043 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:03:45.136 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:45.136 -05 000000037 INF: FPGA: Recv ZYT 15-12-21 22:03:45.136 -05 000000043 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 973823 enc / 9.738 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:03:45.137 -05 000000043 INF: FPGA: Xmit ZARM 34818\n 15-12-21 22:03:45.199 -05 000000081 INF: FPGA: Recv ZARM 15-12-21 22:03:45.199 -05 000000043 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2569 ms 15-12-21 22:03:45.199 -05 000000043 INF: Z Motor: ArmAbsStepped took 138.2868 ms 15-12-21 22:03:45.200 -05 000000043 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:03:45.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:45.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:45.201 -05 000000043 INF: ===================TDI Scan Setup=================== 15-12-21 22:03:45.241 -05 000000043 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:03:45.258 -05 000000043 INF: ===================TDI Scan Setup=================== 15-12-21 22:03:45.308 -05 000000043 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:03:45.308 -05 000000043 INF: ===================TDI Scan Setup=================== 15-12-21 22:03:45.310 -05 000000043 INF: ====================================== 15-12-21 22:03:45.432 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:45.515 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:03:45.515 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:45.544 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:45.544 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:45.544 -05 000000057 INF: WaitCommand(5000) end 15-12-21 22:03:45.545 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:45.546 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:45.581 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:03:45.582 -05 000000036 INF: X Motor: Xmit PR ER\n 15-12-21 22:03:45.582 -05 000000024 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:03:45.618 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:45.619 -05 000000089 INF: ===================WaitCommand=================== 15-12-21 22:03:45.673 -05 000000089 INF: WaitCommand(15000) start 15-12-21 22:03:45.673 -05 000000089 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:03:45.675 -05 000000036 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:03:45.675 -05 000000036 INF: X Motor: Moved to 80.2573 after 835 ms 15-12-21 22:03:45.676 -05 000000036 INF: ====================================== 15-12-21 22:03:45.773 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:45.873 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:45.957 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:46.090 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:03:46.186 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 22:03:46.186 -05 000000024 INF: Current Position of Pump is: 4608 15-12-21 22:03:46.186 -05 000000024 INF: Dispense Steps 48000 is greater than steps to home syringe 4608, reducing number of steps to 4608 15-12-21 22:03:46.187 -05 000000024 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:03:46.286 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD4608R\r 15-12-21 22:03:46.327 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:46.453 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:46.515 -05 000000074 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:03:46.515 -05 000000074 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:03:46.515 -05 000000074 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:03:46.516 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:46.636 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:46.674 -05 000000089 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:03:46.710 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:46.710 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:46.766 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:46.823 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:46.857 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:46.858 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:46.858 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:46.958 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:47.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:47.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:47.107 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:47.179 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:47.429 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:47.494 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:47.495 -05 000000024 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:03:47.495 -05 000000024 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:03:47.542 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:47.594 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:03:47.621 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.846C:A1\r\n 15-12-21 22:03:47.621 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:47.674 -05 000000089 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:03:47.679 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:47.779 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:47.867 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:03:48.104 -05 000000074 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:03:48.105 -05 000000074 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:03:48.105 -05 000000074 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:03:48.106 -05 000000074 INF: ====================================== 15-12-21 22:03:48.108 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:03:48.114 -05 000000025 INF: ====================================== 15-12-21 22:03:48.118 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:03:48.178 -05 000000024 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:03:48.178 -05 000000024 INF: ====================================== 15-12-21 22:03:48.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:48.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:48.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:48.410 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:48.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:48.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:48.535 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:48.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:48.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:48.616 -05 000000063 INF: Y Motor: Moved to 70.6885 after 3895 ms 15-12-21 22:03:48.617 -05 000000063 INF: ====================================== 15-12-21 22:03:48.627 -05 000000049 INF: ===================Move X,Y=================== 15-12-21 22:03:48.629 -05 000000049 INF: ====================================== 15-12-21 22:03:48.632 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:03:48.635 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:48.636 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:03:48.696 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:03:48.696 -05 000000089 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:03:48.702 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:03:48.740 -05 000000029 INF: FPGA: Recv ZFREQCL 15-12-21 22:03:48.742 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:03:48.742 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:48.743 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:03:48.801 -05 000000048 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:03:48.801 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:03:48.803 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:48.804 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:48.805 -05 000000065 INF: ===================TDI FPGA Arm=================== 15-12-21 22:03:48.806 -05 000000078 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:03:48.806 -05 000000078 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:03:48.807 -05 000000065 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:48.815 -05 000000065 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:03:48.815 -05 000000065 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:03:48.896 -05 000000036 INF: FPGA: Recv TDIYPOS 15-12-21 22:03:48.896 -05 000000078 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:03:48.898 -05 000000065 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:48.900 -05 000000078 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:03:48.900 -05 000000078 INF: ====================================== 15-12-21 22:03:48.901 -05 000000065 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:03:48.902 -05 000000065 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:03:48.905 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:48.956 -05 000000074 INF: FPGA: Recv TDIYARM3 15-12-21 22:03:48.958 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.937C:A1\r\n 15-12-21 22:03:48.958 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:48.958 -05 000000065 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:03:48.960 -05 000000065 INF: ===================TDI FPGA Arm=================== 15-12-21 22:03:49.011 -05 000000065 INF: ====================================== 15-12-21 22:03:49.014 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:03:49.068 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:03:49.069 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:49.070 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:49.071 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:49.109 -05 000000055 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:03:49.109 -05 000000009 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:03:49.109 -05 000000055 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:03:49.109 -05 000000055 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:03:49.109 -05 000000055 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:03:49.110 -05 000000055 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:03:49.110 -05 000000009 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:03:49.110 -05 000000009 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:03:49.110 -05 000000009 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:03:49.136 -05 000000009 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:03:49.316 -05 000000078 INF: FPGA: Recv EX1MV 15-12-21 22:03:49.316 -05 000000009 INF: Excitation Filter 1: Moved -36 steps in 206.3495 ms 15-12-21 22:03:49.316 -05 000000009 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 206.537 ms 15-12-21 22:03:49.316 -05 000000009 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 206.6453 ms 15-12-21 22:03:49.317 -05 000000009 INF: ====================================== 15-12-21 22:03:49.504 -05 000000087 INF: FPGA: Recv EX2MV 15-12-21 22:03:49.504 -05 000000055 INF: Excitation Filter 2: Moved -107 steps in 394.6777 ms 15-12-21 22:03:49.504 -05 000000055 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 394.8364 ms 15-12-21 22:03:49.504 -05 000000055 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 394.992 ms 15-12-21 22:03:49.505 -05 000000055 INF: ====================================== 15-12-21 22:03:49.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:49.532 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:03:49.538 -05 000000009 INF: ===================Camera TDI=================== 15-12-21 22:03:49.538 -05 000000068 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:03:49.538 -05 000000024 INF: ===================FPGA Z Wait=================== 15-12-21 22:03:49.539 -05 000000049 INF: ===================Move Y Motor without settling=================== 15-12-21 22:03:49.541 -05 000000024 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:03:49.542 -05 000000049 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:03:49.542 -05 000000049 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:03:49.544 -05 000000049 INF: Y Motor: Xmit 1G\n 15-12-21 22:03:49.544 -05 000000068 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:03:49.544 -05 000000009 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:03:49.545 -05 000000068 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:03:49.550 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 22:03:49.551 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 22:03:49.573 -05 000000049 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:03:49.574 -05 000000049 INF: Y Motor: Recv 1G\r\n 15-12-21 22:03:49.577 -05 000000049 INF: Y Motor: Xmit 1D\n 15-12-21 22:03:49.631 -05 000000049 INF: Y Motor: Recv 1D\r\n 15-12-21 22:03:49.632 -05 000000049 INF: Y Motor: Recv *407662\r\n 15-12-21 22:03:49.633 -05 000000049 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:03:49.699 -05 000000089 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:03:49.794 -05 000000077 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207=================== 15-12-21 22:03:49.812 -05 000000072 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207, Registering and Extracting C035 L001 T1209=================== 15-12-21 22:03:49.847 -05 000000048 INF: FPGA: Recv ZWAIT 15-12-21 22:03:49.849 -05 000000024 INF: ====================================== 15-12-21 22:03:49.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:49.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:49.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:49.970 -05 000000040 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207=================== 15-12-21 22:03:50.004 -05 000000084 INF: ===================Frame #1=================== 15-12-21 22:03:50.011 -05 000000044 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207, Registering and Extracting C035 L001 T1210=================== 15-12-21 22:03:50.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:50.034 -05 000000037 INF: ===================Frame #3=================== 15-12-21 22:03:50.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:50.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:50.052 -05 000000027 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207=================== 15-12-21 22:03:50.111 -05 000000020 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207, Registering and Extracting C035 L001 T1211=================== 15-12-21 22:03:50.140 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:50.156 -05 000000084 INF: ===================Frame #13=================== 15-12-21 22:03:50.160 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:50.160 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:50.170 -05 000000066 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1207=================== 15-12-21 22:03:50.184 -05 000000037 INF: ===================Frame #15=================== 15-12-21 22:03:50.191 -05 000000051 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206=================== 15-12-21 22:03:50.211 -05 000000034 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1212, Registering and Extracting C035 L001 T1213=================== 15-12-21 22:03:50.211 -05 000000082 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1212, Registering and Extracting C035 L001 T1213=================== 15-12-21 22:03:50.307 -05 000000084 INF: ===================Frame #25=================== 15-12-21 22:03:50.314 -05 000000038 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1212=================== 15-12-21 22:03:50.334 -05 000000037 INF: ===================Frame #27=================== 15-12-21 22:03:50.376 -05 000000088 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206=================== 15-12-21 22:03:50.411 -05 000000047 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1214=================== 15-12-21 22:03:50.413 -05 000000023 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1214, Registering and Extracting C035 L001 T1215=================== 15-12-21 22:03:50.458 -05 000000084 INF: ===================Frame #37=================== 15-12-21 22:03:50.485 -05 000000037 INF: ===================Frame #39=================== 15-12-21 22:03:50.507 -05 000000031 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1214=================== 15-12-21 22:03:50.511 -05 000000079 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1214, Registering and Extracting C035 L001 T1216=================== 15-12-21 22:03:50.613 -05 000000084 INF: ===================Frame #49=================== 15-12-21 22:03:50.635 -05 000000037 INF: ===================Frame #51=================== 15-12-21 22:03:50.699 -05 000000089 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:03:50.763 -05 000000084 INF: ===================Frame #61=================== 15-12-21 22:03:50.785 -05 000000037 INF: ===================Frame #63=================== 15-12-21 22:03:50.828 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:50.883 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:03:50.883 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:50.913 -05 000000084 INF: ===================Frame #73=================== 15-12-21 22:03:50.935 -05 000000037 INF: ===================Frame #74=================== 15-12-21 22:03:51.097 -05 000000084 INF: ===================Frame #87=================== 15-12-21 22:03:51.248 -05 000000084 INF: ===================Frame #99=================== 15-12-21 22:03:51.388 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:51.428 -05 000000084 INF: ===================Frame #113=================== 15-12-21 22:03:51.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:51.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:51.530 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:51.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:51.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:51.579 -05 000000084 INF: ===================Frame #125=================== 15-12-21 22:03:51.602 -05 000000037 INF: ===================Frame #127=================== 15-12-21 22:03:51.674 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:51.699 -05 000000089 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:03:51.730 -05 000000084 INF: ===================Frame #137=================== 15-12-21 22:03:51.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:51.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:51.768 -05 000000037 INF: ===================Frame #140=================== 15-12-21 22:03:51.885 -05 000000084 INF: ===================Frame #149=================== 15-12-21 22:03:52.036 -05 000000084 INF: ===================Frame #161=================== 15-12-21 22:03:52.187 -05 000000084 INF: ===================Frame #173=================== 15-12-21 22:03:52.338 -05 000000084 INF: ===================Frame #185=================== 15-12-21 22:03:52.488 -05 000000084 INF: ===================Frame #197=================== 15-12-21 22:03:52.565 -05 000000037 INF: ===================Frame #203=================== 15-12-21 22:03:52.639 -05 000000084 INF: ===================Frame #209=================== 15-12-21 22:03:52.718 -05 000000037 INF: ===================Frame #215=================== 15-12-21 22:03:52.718 -05 000000089 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:03:52.735 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:52.793 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.545C:A1\r\n 15-12-21 22:03:52.793 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:52.794 -05 000000084 INF: ===================Frame #221=================== 15-12-21 22:03:52.883 -05 000000037 INF: ===================Frame #227=================== 15-12-21 22:03:52.944 -05 000000084 INF: ===================Frame #233=================== 15-12-21 22:03:53.034 -05 000000037 INF: ===================Frame #240=================== 15-12-21 22:03:53.065 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:53.094 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:53.094 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:53.095 -05 000000084 INF: ===================Frame #245=================== 15-12-21 22:03:53.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:53.220 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:53.220 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:53.246 -05 000000084 INF: ===================Frame #257=================== 15-12-21 22:03:53.324 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:53.344 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:53.344 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:53.400 -05 000000084 INF: ===================Frame #269=================== 15-12-21 22:03:53.518 -05 000000037 INF: ===================Frame #279=================== 15-12-21 22:03:53.550 -05 000000084 INF: ===================Frame #281=================== 15-12-21 22:03:53.669 -05 000000037 INF: ===================Frame #291=================== 15-12-21 22:03:53.700 -05 000000084 INF: ===================Frame #293=================== 15-12-21 22:03:53.718 -05 000000089 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:03:53.821 -05 000000037 INF: ===================Frame #302=================== 15-12-21 22:03:53.851 -05 000000084 INF: ===================Frame #305=================== 15-12-21 22:03:53.873 -05 000000072 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206, Registering and Extracting C035 L001 T1214=================== 15-12-21 22:03:54.002 -05 000000084 INF: ===================Frame #317=================== 15-12-21 22:03:54.100 -05 000000037 INF: ===================Frame #325=================== 15-12-21 22:03:54.153 -05 000000084 INF: ===================Frame #329=================== 15-12-21 22:03:54.214 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:54.251 -05 000000037 INF: ===================Frame #337=================== 15-12-21 22:03:54.282 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.476C:A1\r\n 15-12-21 22:03:54.282 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:54.304 -05 000000084 INF: ===================Frame #341=================== 15-12-21 22:03:54.401 -05 000000037 INF: ===================Frame #348=================== 15-12-21 22:03:54.455 -05 000000084 INF: ===================Frame #353=================== 15-12-21 22:03:54.455 -05 000000020 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205, Registering and Extracting C035 L001 T1206=================== 15-12-21 22:03:54.573 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:54.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:54.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:54.605 -05 000000084 INF: ===================Frame #365=================== 15-12-21 22:03:54.652 -05 000000037 INF: ===================Frame #368=================== 15-12-21 22:03:54.695 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:54.717 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:54.717 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:54.718 -05 000000089 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:03:54.756 -05 000000084 INF: ===================Frame #377=================== 15-12-21 22:03:54.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:54.824 -05 000000037 INF: ===================Frame #382=================== 15-12-21 22:03:54.842 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:54.842 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:54.907 -05 000000084 INF: ===================Frame #388=================== 15-12-21 22:03:54.999 -05 000000037 INF: ===================Frame #396=================== 15-12-21 22:03:55.069 -05 000000082 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204, Registering and Extracting C035 L001 T1205=================== 15-12-21 22:03:55.181 -05 000000034 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203, Registering and Extracting C035 L001 T1204=================== 15-12-21 22:03:55.184 -05 000000037 INF: ===================Frame #410=================== 15-12-21 22:03:55.242 -05 000000047 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202, Registering and Extracting C035 L001 T1203=================== 15-12-21 22:03:55.373 -05 000000037 INF: ===================Frame #425=================== 15-12-21 22:03:55.476 -05 000000044 INF: ===================Registering and Extracting C035 L001 T1201, Registering and Extracting C035 L001 T1202=================== 15-12-21 22:03:55.523 -05 000000037 INF: ===================Frame #437=================== 15-12-21 22:03:55.656 -05 000000084 INF: ===================Frame #448=================== 15-12-21 22:03:55.674 -05 000000037 INF: ===================Frame #449=================== 15-12-21 22:03:55.718 -05 000000089 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:03:55.815 -05 000000023 INF: ===================Registering and Extracting C035 L001 T1201=================== 15-12-21 22:03:55.824 -05 000000037 INF: ===================Frame #461=================== 15-12-21 22:03:55.870 -05 000000079 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:03:55.874 -05 000000084 INF: ===================Frame #465=================== 15-12-21 22:03:55.890 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:55.896 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:03:55.974 -05 000000037 INF: ===================Frame #473=================== 15-12-21 22:03:55.983 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:55.988 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:03:56.024 -05 000000084 INF: ===================Frame #477=================== 15-12-21 22:03:56.064 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:03:56.088 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:03:56.088 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:56.095 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:56.100 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:03:56.124 -05 000000037 INF: ===================Frame #485=================== 15-12-21 22:03:56.174 -05 000000084 INF: ===================Frame #489=================== 15-12-21 22:03:56.189 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:56.205 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:56.212 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:03:56.215 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:56.215 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:56.276 -05 000000037 INF: ===================Frame #497=================== 15-12-21 22:03:56.311 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:03:56.317 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:56.324 -05 000000084 INF: ===================Frame #500=================== 15-12-21 22:03:56.341 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:56.341 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:56.427 -05 000000037 INF: ===================Frame #509=================== 15-12-21 22:03:56.447 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:56.527 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:56.527 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:56.578 -05 000000037 INF: ===================Frame #521=================== 15-12-21 22:03:56.592 -05 000000084 INF: ===================Frame #522=================== 15-12-21 22:03:56.720 -05 000000089 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:03:56.728 -05 000000037 INF: ===================Frame #532=================== 15-12-21 22:03:56.782 -05 000000084 INF: ===================Frame #537=================== 15-12-21 22:03:56.933 -05 000000084 INF: ===================Frame #549=================== 15-12-21 22:03:57.083 -05 000000084 INF: ===================Frame #561=================== 15-12-21 22:03:57.166 -05 000000037 INF: ===================Frame #567=================== 15-12-21 22:03:57.233 -05 000000084 INF: ===================Frame #572=================== 15-12-21 22:03:57.296 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:03:57.316 -05 000000037 INF: ===================Frame #579=================== 15-12-21 22:03:57.459 -05 000000084 INF: ===================Frame #590=================== 15-12-21 22:03:57.466 -05 000000037 INF: ===================Frame #591=================== 15-12-21 22:03:57.616 -05 000000037 INF: ===================Frame #603=================== 15-12-21 22:03:57.633 -05 000000084 INF: ===================Frame #604=================== 15-12-21 22:03:57.720 -05 000000089 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:03:57.768 -05 000000037 INF: ===================Frame #615=================== 15-12-21 22:03:57.800 -05 000000084 INF: ===================Frame #617=================== 15-12-21 22:03:57.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:57.840 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:57.840 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:57.918 -05 000000037 INF: ===================Frame #626=================== 15-12-21 22:03:57.947 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:03:57.950 -05 000000084 INF: ===================Frame #629=================== 15-12-21 22:03:57.960 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.223C:A1\r\n 15-12-21 22:03:57.960 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:58.067 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:58.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:58.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:58.100 -05 000000084 INF: ===================Frame #641=================== 15-12-21 22:03:58.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:58.201 -05 000000037 INF: ===================Frame #649=================== 15-12-21 22:03:58.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:58.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:58.250 -05 000000084 INF: ===================Frame #653=================== 15-12-21 22:03:58.352 -05 000000037 INF: ===================Frame #661=================== 15-12-21 22:03:58.400 -05 000000084 INF: ===================Frame #665=================== 15-12-21 22:03:58.504 -05 000000037 INF: ===================Frame #673=================== 15-12-21 22:03:58.550 -05 000000084 INF: ===================Frame #676=================== 15-12-21 22:03:58.655 -05 000000037 INF: ===================Frame #685=================== 15-12-21 22:03:58.720 -05 000000089 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:03:58.800 -05 000000084 INF: ===================Frame #696=================== 15-12-21 22:03:58.805 -05 000000037 INF: ===================Frame #697=================== 15-12-21 22:03:58.955 -05 000000037 INF: ===================Frame #709=================== 15-12-21 22:03:58.983 -05 000000084 INF: ===================Frame #711=================== 15-12-21 22:03:59.107 -05 000000037 INF: ===================Frame #720=================== 15-12-21 22:03:59.133 -05 000000084 INF: ===================Frame #723=================== 15-12-21 22:03:59.284 -05 000000084 INF: ===================Frame #734=================== 15-12-21 22:03:59.386 -05 000000037 INF: ===================Frame #743=================== 15-12-21 22:03:59.432 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:03:59.457 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.066C:A1\r\n 15-12-21 22:03:59.457 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:59.484 -05 000000084 INF: ===================Frame #750=================== 15-12-21 22:03:59.536 -05 000000037 INF: ===================Frame #754=================== 15-12-21 22:03:59.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:03:59.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:03:59.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:59.657 -05 000000084 INF: ===================Frame #764=================== 15-12-21 22:03:59.691 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:03:59.708 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:59.708 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:59.721 -05 000000089 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:03:59.728 -05 000000037 INF: ===================Frame #770=================== 15-12-21 22:03:59.814 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:03:59.824 -05 000000084 INF: ===================Frame #777=================== 15-12-21 22:03:59.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:03:59.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:03:59.899 -05 000000037 INF: ===================Frame #783=================== 15-12-21 22:03:59.975 -05 000000084 INF: ===================Frame #789=================== 15-12-21 22:04:00.050 -05 000000037 INF: ===================Frame #795=================== 15-12-21 22:04:00.125 -05 000000084 INF: ===================Frame #801=================== 15-12-21 22:04:00.200 -05 000000037 INF: ===================Frame #807=================== 15-12-21 22:04:00.276 -05 000000084 INF: ===================Frame #813=================== 15-12-21 22:04:00.351 -05 000000037 INF: ===================Frame #819=================== 15-12-21 22:04:00.426 -05 000000084 INF: ===================Frame #825=================== 15-12-21 22:04:00.502 -05 000000037 INF: ===================Frame #831=================== 15-12-21 22:04:00.577 -05 000000084 INF: ===================Frame #837=================== 15-12-21 22:04:00.652 -05 000000037 INF: ===================Frame #843=================== 15-12-21 22:04:00.674 -05 000000089 INF: ===================WaitCommand=================== 15-12-21 22:04:00.674 -05 000000089 INF: WaitCommand(15000) end 15-12-21 22:04:00.675 -05 000000089 INF: ====================================== 15-12-21 22:04:00.676 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:04:00.678 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:04:00.678 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:04:00.679 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle=================== 15-12-21 22:04:00.681 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:00.682 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:00.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:00.684 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:00.737 -05 000000084 INF: ===================Frame #849=================== 15-12-21 22:04:00.770 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:00.772 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent CWM (8)=================== 15-12-21 22:04:00.772 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:00.775 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:04:00.775 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:00.802 -05 000000037 INF: ===================Frame #855=================== 15-12-21 22:04:00.830 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:04:00.830 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:00.928 -05 000000084 INF: ===================Frame #864=================== 15-12-21 22:04:00.952 -05 000000037 INF: ===================Frame #866=================== 15-12-21 22:04:01.194 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:04:01.239 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:04:01.239 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:01.351 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:01.376 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:01.376 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:01.484 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:01.564 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.011C:A1\r\n 15-12-21 22:04:01.564 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:01.658 -05 000000037 INF: ===================Frame #922=================== 15-12-21 22:04:01.663 -05 000000084 INF: ===================Frame #923=================== 15-12-21 22:04:01.667 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:01.688 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:04:01.688 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:01.790 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:01.791 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:01.791 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:04:01.814 -05 000000084 INF: ===================Frame #934=================== 15-12-21 22:04:01.815 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:01.815 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:01.873 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:01.875 -05 000000037 INF: ===================Frame #939=================== 15-12-21 22:04:01.918 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:01.922 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:01.928 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:04:01.942 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:01.942 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:02.022 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:04:02.025 -05 000000037 INF: ===================Frame #951=================== 15-12-21 22:04:02.045 -05 000000084 INF: ===================Frame #953=================== 15-12-21 22:04:02.111 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:04:02.111 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 22:04:02.111 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:04:02.175 -05 000000037 INF: ===================Frame #963=================== 15-12-21 22:04:02.196 -05 000000084 INF: ===================Frame #965=================== 15-12-21 22:04:02.212 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P18240R\r 15-12-21 22:04:02.297 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:02.326 -05 000000037 INF: ===================Frame #975=================== 15-12-21 22:04:02.346 -05 000000084 INF: ===================Frame #977=================== 15-12-21 22:04:02.397 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:02.477 -05 000000037 INF: ===================Frame #987=================== 15-12-21 22:04:02.484 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:02.496 -05 000000084 INF: ===================Frame #988=================== 15-12-21 22:04:02.628 -05 000000037 INF: ===================Frame #999=================== 15-12-21 22:04:02.706 -05 000000084 INF: ===================Frame #1005=================== 15-12-21 22:04:02.734 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:02.778 -05 000000037 INF: ===================Frame #1011=================== 15-12-21 22:04:02.796 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:02.856 -05 000000084 INF: ===================Frame #1017=================== 15-12-21 22:04:02.929 -05 000000037 INF: ===================Frame #1023=================== 15-12-21 22:04:03.007 -05 000000084 INF: ===================Frame #1029=================== 15-12-21 22:04:03.046 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:03.079 -05 000000037 INF: ===================Frame #1034=================== 15-12-21 22:04:03.109 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:03.159 -05 000000084 INF: ===================Frame #1041=================== 15-12-21 22:04:03.167 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:03.187 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.969C:A1\r\n 15-12-21 22:04:03.187 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:03.291 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:03.310 -05 000000084 INF: ===================Frame #1053=================== 15-12-21 22:04:03.313 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:03.313 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:03.359 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:03.360 -05 000000037 INF: ===================Frame #1057=================== 15-12-21 22:04:03.422 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:03.424 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:03.461 -05 000000084 INF: ===================Frame #1065=================== 15-12-21 22:04:03.501 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:03.501 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:03.510 -05 000000037 INF: ===================Frame #1069=================== 15-12-21 22:04:03.608 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:03.612 -05 000000084 INF: ===================Frame #1077=================== 15-12-21 22:04:03.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:03.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:03.660 -05 000000037 INF: ===================Frame #1080=================== 15-12-21 22:04:03.674 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:03.734 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:03.762 -05 000000084 INF: ===================Frame #1088=================== 15-12-21 22:04:03.863 -05 000000037 INF: ===================Frame #1096=================== 15-12-21 22:04:03.984 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:04.027 -05 000000084 INF: ===================Frame #1109=================== 15-12-21 22:04:04.035 -05 000000037 INF: ===================Frame #1110=================== 15-12-21 22:04:04.045 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:04.179 -05 000000084 INF: ===================Frame #1121=================== 15-12-21 22:04:04.200 -05 000000037 INF: ===================Frame #1123=================== 15-12-21 22:04:04.295 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:04.329 -05 000000084 INF: ===================Frame #1133=================== 15-12-21 22:04:04.350 -05 000000037 INF: ===================Frame #1135=================== 15-12-21 22:04:04.356 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:04.479 -05 000000084 INF: ===================Frame #1145=================== 15-12-21 22:04:04.500 -05 000000037 INF: ===================Frame #1147=================== 15-12-21 22:04:04.560 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:04.606 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:04.622 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.865C:A1\r\n 15-12-21 22:04:04.622 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:04.630 -05 000000084 INF: ===================Frame #1157=================== 15-12-21 22:04:04.650 -05 000000037 INF: ===================Frame #1159=================== 15-12-21 22:04:04.672 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:04.781 -05 000000084 INF: ===================Frame #1169=================== 15-12-21 22:04:04.800 -05 000000037 INF: ===================Frame #1171=================== 15-12-21 22:04:04.850 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:04.873 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:04.873 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:04.922 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:04.932 -05 000000084 INF: ===================Frame #1181=================== 15-12-21 22:04:04.950 -05 000000037 INF: ===================Frame #1182=================== 15-12-21 22:04:04.979 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:04.980 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:04.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:04.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:05.082 -05 000000084 INF: ===================Frame #1193=================== 15-12-21 22:04:05.101 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:05.174 -05 000000037 INF: ===================Frame #1200=================== 15-12-21 22:04:05.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:05.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:05.230 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:05.232 -05 000000084 INF: ===================Frame #1205=================== 15-12-21 22:04:05.296 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:05.341 -05 000000037 INF: ===================Frame #1213=================== 15-12-21 22:04:05.382 -05 000000084 INF: ===================Frame #1217=================== 15-12-21 22:04:05.493 -05 000000037 INF: ===================Frame #1225=================== 15-12-21 22:04:05.532 -05 000000084 INF: ===================Frame #1228=================== 15-12-21 22:04:05.546 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:05.607 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:05.643 -05 000000037 INF: ===================Frame #1237=================== 15-12-21 22:04:05.794 -05 000000037 INF: ===================Frame #1249=================== 15-12-21 22:04:05.832 -05 000000084 INF: ===================Frame #1250=================== 15-12-21 22:04:05.852 -05 000000054 INF: FPGA: Recv TDIYWAIT 15-12-21 22:04:05.855 -05 000000068 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:05.856 -05 000000084 INF: Camera complete - got 1250 frames. 15-12-21 22:04:05.857 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:05.857 -05 000000084 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:04:05.860 -05 000000068 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:04:05.862 -05 000000028 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:04:05.862 -05 000000036 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:04:05.862 -05 000000028 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:04:05.863 -05 000000028 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:04:05.863 -05 000000028 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:04:05.863 -05 000000036 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:04:05.865 -05 000000036 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:04:05.865 -05 000000036 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:04:05.865 -05 000000028 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:04:05.867 -05 000000036 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:04:05.920 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:06.059 -05 000000056 INF: FPGA: Recv EX1MV 15-12-21 22:04:06.068 -05 000000028 INF: Excitation Filter 1: Moved 36 steps in 204.4613 ms 15-12-21 22:04:06.068 -05 000000028 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 205.8141 ms 15-12-21 22:04:06.073 -05 000000028 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 206.0099 ms 15-12-21 22:04:06.100 -05 000000028 INF: ====================================== 15-12-21 22:04:06.138 -05 000000037 INF: ===================Frame #1250=================== 15-12-21 22:04:06.138 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 22:04:06.170 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:06.171 -05 000000084 INF: ====================================== 15-12-21 22:04:06.273 -05 000000056 INF: FPGA: Recv EX2MV 15-12-21 22:04:06.274 -05 000000036 INF: Excitation Filter 2: Moved 107 steps in 409.0128 ms 15-12-21 22:04:06.274 -05 000000036 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 409.1521 ms 15-12-21 22:04:06.274 -05 000000036 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 411.2733 ms 15-12-21 22:04:06.275 -05 000000036 INF: ====================================== 15-12-21 22:04:06.277 -05 000000068 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:06.279 -05 000000068 INF: ====================================== 15-12-21 22:04:06.292 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:06.307 -05 000000037 INF: Camera complete - got 1250 frames. 15-12-21 22:04:06.308 -05 000000037 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:04:06.423 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 22:04:06.444 -05 000000037 INF: ====================================== 15-12-21 22:04:06.448 -05 000000009 INF: ===================Camera TDI=================== 15-12-21 22:04:06.449 -05 000000009 INF: ====================================== 15-12-21 22:04:06.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:06.478 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:06.478 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:06.542 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:06.582 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:06.604 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:06.604 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:06.604 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:06.604 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:04:06.666 -05 000000049 INF: Y Motor: Moved to 9.0765 after 17031 ms 15-12-21 22:04:06.666 -05 000000049 INF: ====================================== 15-12-21 22:04:06.668 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:06.670 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:06.677 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:06.678 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:04:06.704 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:04:06.705 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:06.710 -05 000000033 INF: FPGA: Recv TDICLINES 10778 15-12-21 22:04:06.710 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:04:06.730 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:04:06.730 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:06.774 -05 000000028 INF: FPGA: Recv TDIYERD 907647 15-12-21 22:04:06.774 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:04:06.791 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 22:04:06.791 -05 000000057 INF: Current Position of Pump is: 18240 15-12-21 22:04:06.791 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:04:06.831 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:06.836 -05 000000037 INF: FPGA: Recv ZADCR 38781 15-12-21 22:04:06.836 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.148. Y moved -60.304 mm 15-12-21 22:04:06.836 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:04:06.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:06.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:06.891 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:04:06.898 -05 000000041 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:04:06.898 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:04:06.898 -05 000000062 INF: TDIScan finished after 22359.6419 ms 15-12-21 22:04:06.898 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:04:06.898 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:04:06.903 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:06.930 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.005 um 15-12-21 22:04:06.931 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:06.937 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:06.938 -05 000000081 INF: ===================Dither Clean Up Command=================== 15-12-21 22:04:06.939 -05 000000074 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:04:06.939 -05 000000074 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:04:06.939 -05 000000086 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:04:06.939 -05 000000084 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:04:06.944 -05 000000084 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:04:06.944 -05 000000084 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:04:06.944 -05 000000036 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:04:06.946 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:06.947 -05 000000025 INF: ===================LFT:Extracting coords=================== 15-12-21 22:04:06.947 -05 000000036 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:04:06.966 -05 000000061 INF: FPGA: Recv ZSTEP 15-12-21 22:04:06.967 -05 000000061 INF: FPGA: Recv ZSEL 15-12-21 22:04:06.967 -05 000000036 INF: FPGA: Xmit ZDACW 45304\n 15-12-21 22:04:06.967 -05 000000084 INF: ====================================== 15-12-21 22:04:06.978 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:06.978 -05 000000074 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:04:06.979 -05 000000086 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:04:06.979 -05 000000074 INF: ====================================== 15-12-21 22:04:06.984 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:06.985 -05 000000025 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:04:06.987 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:06.987 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:06.987 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:06.987 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:06.987 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:06.987 -05 000000028 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:06.987 -05 000000041 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:06.987 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:07.024 -05 000000061 INF: FPGA: Recv ZDACW 15-12-21 22:04:07.025 -05 000000036 INF: ====================================== 15-12-21 22:04:07.040 -05 000000086 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:04:07.041 -05 000000086 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:04:07.041 -05 000000086 INF: ====================================== 15-12-21 22:04:07.078 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:07.163 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:07.165 -05 000000045 INF: LFT found best fwhm score 2.678715 in 128 ms 15-12-21 22:04:07.165 -05 000000045 INF: LFT found good score at index 6965 with fwhm value 2.678715. Next cycle, cycle 36 starting Z position for top surface is at -0.175 mm FC:B, C:35,L:2,T 15-12-21 22:04:07.166 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:07.166 -05 000000045 INF: ====================================== 15-12-21 22:04:07.166 -05 000000056 INF: LFT found best fwhm score 2.606375 in 128 ms 15-12-21 22:04:07.166 -05 000000056 INF: LFT found good score at index 2129 with fwhm value 2.606375. Next cycle, cycle 36 starting Z position for top surface is at -0.176 mm FC:B, C:35,L:2,T 15-12-21 22:04:07.167 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:07.167 -05 000000056 INF: ====================================== 15-12-21 22:04:07.211 -05 000000041 INF: LFT found best fwhm score 2.283231 in 176 ms 15-12-21 22:04:07.211 -05 000000041 INF: LFT found good score at index 7193 with fwhm value 2.283231. Next cycle, cycle 36 starting Z position for top surface is at -0.175 mm FC:B, C:35,L:2,T 15-12-21 22:04:07.211 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:07.212 -05 000000041 INF: ====================================== 15-12-21 22:04:07.212 -05 000000028 INF: LFT found best fwhm score 2.573486 in 176 ms 15-12-21 22:04:07.212 -05 000000028 INF: LFT found good score at index 1561 with fwhm value 2.573486. Next cycle, cycle 36 starting Z position for top surface is at -0.176 mm FC:B, C:35,L:2,T 15-12-21 22:04:07.213 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:07.213 -05 000000028 INF: ====================================== 15-12-21 22:04:07.218 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:07.219 -05 000000025 INF: LFT weighted average best Z for top surface is at -0.176mm FC:B, C:35,L:2,T 15-12-21 22:04:07.220 -05 000000025 INF: ====================================== 15-12-21 22:04:07.222 -05 000000081 INF: ====================================== 15-12-21 22:04:07.225 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:07.227 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:04:07.227 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:07.227 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:04:07.228 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:07.228 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:04:07.228 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:07.228 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:04:07.228 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:07.229 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:04:07.229 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:04:07.231 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Waiting for image analysis=================== 15-12-21 22:04:07.231 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:04:07.231 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:04:07.231 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:04:07.231 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:04:07.233 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:04:07.233 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:07.233 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:04:07.234 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:04:07.234 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:04:07.248 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:07.248 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:04:07.248 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:07.248 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -172.8 um, section = B_1 15-12-21 22:04:07.253 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:07.254 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:07.255 -05 000000056 INF: ===================MoveEmissionFilters=================== 15-12-21 22:04:07.255 -05 000000074 INF: ===================Move X,Y=================== 15-12-21 22:04:07.255 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:07.258 -05 000000074 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:04:07.258 -05 000000089 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:04:07.258 -05 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:04:07.258 -05 000000043 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:04:07.259 -05 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:04:07.259 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:04:07.263 -05 000000084 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:04:07.265 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:07.269 -05 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:04:07.270 -05 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:04:07.270 -05 000000043 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:04:07.270 -05 000000048 INF: ===================Move X Motor without settling=================== 15-12-21 22:04:07.270 -05 000000041 INF: ===================Move Y Motor without settling=================== 15-12-21 22:04:07.272 -05 000000048 INF: X Motor: Xmit PR VM\n 15-12-21 22:04:07.273 -05 000000041 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:04:07.273 -05 000000041 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:04:07.273 -05 000000089 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:04:07.273 -05 000000028 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:04:07.274 -05 000000037 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:04:07.274 -05 000000025 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:04:07.274 -05 000000063 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:04:07.274 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:04:07.274 -05 000000028 INF: ====================================== 15-12-21 22:04:07.274 -05 000000063 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:04:07.274 -05 000000092 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:04:07.274 -05 000000063 INF: ====================================== 15-12-21 22:04:07.279 -05 000000086 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:04:07.283 -05 000000041 INF: Y Motor: Xmit 1G\n 15-12-21 22:04:07.283 -05 000000037 INF: ====================================== 15-12-21 22:04:07.286 -05 000000087 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:04:07.286 -05 000000092 INF: ====================================== 15-12-21 22:04:07.286 -05 000000086 INF: ====================================== 15-12-21 22:04:07.286 -05 000000025 INF: ====================================== 15-12-21 22:04:07.287 -05 000000045 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:04:07.287 -05 000000087 INF: ====================================== 15-12-21 22:04:07.287 -05 000000045 INF: ====================================== 15-12-21 22:04:07.288 -05 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:04:07.288 -05 000000049 INF: ===================Camera Arm TDI=================== 15-12-21 22:04:07.288 -05 000000064 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:07.293 -05 000000043 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:04:07.294 -05 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:04:07.296 -05 000000089 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:04:07.296 -05 000000064 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:07.299 -05 000000009 INF: ====================================== 15-12-21 22:04:07.307 -05 000000043 INF: ====================================== 15-12-21 22:04:07.309 -05 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:04:07.309 -05 000000089 INF: ====================================== 15-12-21 22:04:07.310 -05 000000064 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:04:07.310 -05 000000064 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:04:07.312 -05 000000061 INF: ====================================== 15-12-21 22:04:07.324 -05 000000056 INF: ====================================== 15-12-21 22:04:07.335 -05 000000055 INF: FPGA: Recv ZSEL 15-12-21 22:04:07.335 -05 000000064 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:04:07.336 -05 000000064 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:07.342 -05 000000064 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:04:07.342 -05 000000064 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:04:07.342 -05 000000064 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:04:07.351 -05 000000041 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:04:07.352 -05 000000041 INF: Y Motor: Recv 1G\r\n 15-12-21 22:04:07.352 -05 000000048 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:04:07.352 -05 000000048 INF: X Motor: Xmit PR VI\n 15-12-21 22:04:07.353 -05 000000041 INF: Y Motor: Xmit 1D\n 15-12-21 22:04:07.371 -05 000000047 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103=================== 15-12-21 22:04:07.372 -05 000000023 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103=================== 15-12-21 22:04:07.372 -05 000000034 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105=================== 15-12-21 22:04:07.372 -05 000000020 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106=================== 15-12-21 22:04:07.372 -05 000000079 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103=================== 15-12-21 22:04:07.372 -05 000000072 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107, Registering and Extracting C035 L002 T1108=================== 15-12-21 22:04:07.373 -05 000000044 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107=================== 15-12-21 22:04:07.373 -05 000000082 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104=================== 15-12-21 22:04:07.396 -05 000000028 INF: FPGA: Recv ZSTEP 15-12-21 22:04:07.397 -05 000000064 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:07.401 -05 000000064 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:04:07.401 -05 000000064 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:07.405 -05 000000064 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:04:07.405 -05 000000064 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:04:07.409 -05 000000064 INF: Z Motor: Arming to move to -0.1328 mm 15-12-21 22:04:07.409 -05 000000064 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:04:07.413 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:07.415 -05 000000041 INF: Y Motor: Recv 1D\r\n 15-12-21 22:04:07.416 -05 000000048 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:04:07.416 -05 000000048 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:04:07.416 -05 000000048 INF: X Motor: Moving to 81.0290 mm @15.000 mm/sec, started at 80.2573 mm 15-12-21 22:04:07.416 -05 000000041 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:04:07.416 -05 000000048 INF: X Motor: Xmit MA 9023\n 15-12-21 22:04:07.417 -05 000000041 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:04:07.492 -05 000000029 INF: FPGA: Recv ZYT 15-12-21 22:04:07.495 -05 000000064 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907646 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:04:07.495 -05 000000064 INF: FPGA: Xmit ZARM 34818\n 15-12-21 22:04:07.509 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:07.510 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:07.510 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:04:07.510 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:07.511 -05 000000048 INF: X Motor: Recv MA 9023\r\n> 15-12-21 22:04:07.511 -05 000000048 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:04:07.555 -05 000000043 INF: FPGA: Recv ZARM 15-12-21 22:04:07.555 -05 000000064 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 59.9063 ms 15-12-21 22:04:07.555 -05 000000064 INF: Z Motor: ArmAbsStepped took 145.45 ms 15-12-21 22:04:07.556 -05 000000064 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:07.562 -05 000000064 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:07.564 -05 000000064 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:04:07.568 -05 000000064 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:07.571 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:04:07.571 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:07.616 -05 000000064 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:04:07.638 -05 000000064 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:07.730 -05 000000064 INF: ====================================== 15-12-21 22:04:07.875 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:04:07.917 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:04:07.917 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:07.917 -05 000000048 INF: X Motor: Xmit PR ER\n 15-12-21 22:04:08.078 -05 000000048 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:04:08.078 -05 000000048 INF: X Motor: Moved to 81.0288 after 567 ms 15-12-21 22:04:08.079 -05 000000048 INF: ====================================== 15-12-21 22:04:08.249 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:08.258 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:04:08.258 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:08.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:08.368 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:08.368 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:08.369 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:08.465 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:08.465 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 236ms 15-12-21 22:04:08.609 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:08.642 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:08.712 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:08.713 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.840C:A1\r\n 15-12-21 22:04:08.713 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:08.713 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent USB (6)=================== 15-12-21 22:04:08.713 -05 000000057 INF: Valve A2: Go to position 6 15-12-21 22:04:08.713 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:04:08.787 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 8\r 15-12-21 22:04:08.787 -05 000000057 INF: Valve A2: 33.586 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:04:08.787 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 8 to 6 15-12-21 22:04:08.787 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC6\r 15-12-21 22:04:08.788 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:04:08.788 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:04:08.794 -05 000000049 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:04:08.794 -05 000000049 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:04:08.794 -05 000000049 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:04:08.845 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:08.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:08.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:09.071 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:09.167 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:09.167 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:09.380 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 6\r 15-12-21 22:04:09.381 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:09.381 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:04:09.381 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:09.457 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:04:09.457 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:09.602 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:04:09.653 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:04:09.653 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:09.818 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:09.910 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.496C:A1\r\n 15-12-21 22:04:09.910 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:10.045 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:10.116 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:04:10.116 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:10.255 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:10.256 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 22:04:10.256 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:10.349 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:10.373 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 6, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 140, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:04:10.429 -05 000000049 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:04:10.430 -05 000000049 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:04:10.430 -05 000000049 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:04:10.431 -05 000000049 INF: ====================================== 15-12-21 22:04:10.434 -05 000000084 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:10.440 -05 000000084 INF: ====================================== 15-12-21 22:04:10.450 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:04:10.489 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 22:04:10.489 -05 000000057 INF: Current Position of Pump is: 18240 15-12-21 22:04:10.490 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6), Aspirating port PortB=================== 15-12-21 22:04:10.504 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:10.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:10.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:10.589 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P26880R\r 15-12-21 22:04:10.618 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:10.645 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:10.645 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:10.684 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:10.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:10.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:10.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:10.784 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:10.876 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:11.069 -05 000000041 INF: Y Motor: Moved to 70.6885 after 3652 ms 15-12-21 22:04:11.070 -05 000000041 INF: ====================================== 15-12-21 22:04:11.076 -05 000000074 INF: ===================Move X,Y=================== 15-12-21 22:04:11.078 -05 000000074 INF: ====================================== 15-12-21 22:04:11.087 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:11.089 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:11.089 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:04:11.126 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:11.128 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:04:11.129 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:04:11.187 -05 000000061 INF: FPGA: Recv ZFREQCL 15-12-21 22:04:11.188 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:11.188 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:04:11.188 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:11.189 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:04:11.249 -05 000000065 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:04:11.249 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:04:11.250 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:11.251 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:11.260 -05 000000068 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:04:11.260 -05 000000068 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:04:11.260 -05 000000084 INF: ===================TDI FPGA Arm=================== 15-12-21 22:04:11.264 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:11.267 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:04:11.286 -05 000000084 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:04:11.322 -05 000000078 INF: FPGA: Recv TDIYPOS 15-12-21 22:04:11.323 -05 000000068 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:04:11.325 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:11.326 -05 000000068 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:04:11.326 -05 000000068 INF: ====================================== 15-12-21 22:04:11.329 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:04:11.330 -05 000000084 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:04:11.375 -05 000000089 INF: FPGA: Recv TDIYARM3 15-12-21 22:04:11.376 -05 000000084 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:11.379 -05 000000084 INF: ===================TDI FPGA Arm=================== 15-12-21 22:04:11.383 -05 000000084 INF: ====================================== 15-12-21 22:04:11.385 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:11.386 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:11.387 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:11.388 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:11.389 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:11.390 -05 000000086 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:04:11.391 -05 000000086 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:04:11.391 -05 000000086 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:04:11.391 -05 000000086 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:04:11.391 -05 000000086 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:04:11.391 -05 000000055 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:04:11.391 -05 000000055 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:04:11.391 -05 000000055 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:04:11.391 -05 000000055 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:04:11.393 -05 000000055 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:04:11.438 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:11.500 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:11.561 -05 000000025 INF: FPGA: Recv EX1MV 15-12-21 22:04:11.561 -05 000000086 INF: Excitation Filter 1: Moved -36 steps in 170.3583 ms 15-12-21 22:04:11.561 -05 000000086 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 170.481 ms 15-12-21 22:04:11.561 -05 000000086 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 170.5737 ms 15-12-21 22:04:11.562 -05 000000086 INF: ====================================== 15-12-21 22:04:11.762 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:11.764 -05 000000024 INF: FPGA: Recv EX2MV 15-12-21 22:04:11.764 -05 000000055 INF: Excitation Filter 2: Moved -107 steps in 371.8073 ms 15-12-21 22:04:11.764 -05 000000055 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 371.9216 ms 15-12-21 22:04:11.764 -05 000000055 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 372.0091 ms 15-12-21 22:04:11.766 -05 000000055 INF: ====================================== 15-12-21 22:04:11.809 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:11.811 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:11.956 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:11.956 -05 000000064 INF: ===================Camera TDI=================== 15-12-21 22:04:11.970 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:11.970 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:11.971 -05 000000056 INF: ===================FPGA Z Wait=================== 15-12-21 22:04:11.971 -05 000000063 INF: ===================Move Y Motor without settling=================== 15-12-21 22:04:11.971 -05 000000056 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:04:11.971 -05 000000064 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:04:11.971 -05 000000025 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:04:11.971 -05 000000063 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:04:11.976 -05 000000063 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:04:11.976 -05 000000063 INF: Y Motor: Xmit 1G\n 15-12-21 22:04:11.979 -05 000000025 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:04:11.980 -05 000000087 INF: ===================Camera TDI=================== 15-12-21 22:04:11.981 -05 000000048 INF: ===================Camera TDI=================== 15-12-21 22:04:12.016 -05 000000063 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:04:12.017 -05 000000063 INF: Y Motor: Recv 1G\r\n 15-12-21 22:04:12.018 -05 000000063 INF: Y Motor: Xmit 1D\n 15-12-21 22:04:12.085 -05 000000063 INF: Y Motor: Recv 1D\r\n 15-12-21 22:04:12.086 -05 000000063 INF: Y Motor: Recv *407662\r\n 15-12-21 22:04:12.090 -05 000000063 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:04:12.220 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:12.274 -05 000000024 INF: FPGA: Recv ZWAIT 15-12-21 22:04:12.275 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:12.276 -05 000000056 INF: ====================================== 15-12-21 22:04:12.450 -05 000000048 INF: ===================Frame #2=================== 15-12-21 22:04:12.450 -05 000000087 INF: ===================Frame #2=================== 15-12-21 22:04:12.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:12.489 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:12.489 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:12.525 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:12.625 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:12.626 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:12.653 -05 000000048 INF: ===================Frame #18=================== 15-12-21 22:04:12.654 -05 000000087 INF: ===================Frame #18=================== 15-12-21 22:04:12.688 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:12.688 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:12.700 -05 000000047 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107=================== 15-12-21 22:04:12.725 -05 000000031 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107, Registering and Extracting C035 L002 T1109=================== 15-12-21 22:04:12.787 -05 000000082 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107=================== 15-12-21 22:04:12.794 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:12.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:12.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:12.826 -05 000000088 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107, Registering and Extracting C035 L002 T1110=================== 15-12-21 22:04:12.876 -05 000000048 INF: ===================Frame #35=================== 15-12-21 22:04:12.876 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:12.876 -05 000000087 INF: ===================Frame #36=================== 15-12-21 22:04:12.943 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:13.026 -05 000000048 INF: ===================Frame #47=================== 15-12-21 22:04:13.061 -05 000000087 INF: ===================Frame #50=================== 15-12-21 22:04:13.123 -05 000000020 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107=================== 15-12-21 22:04:13.129 -05 000000027 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107, Registering and Extracting C035 L002 T1111=================== 15-12-21 22:04:13.177 -05 000000048 INF: ===================Frame #59=================== 15-12-21 22:04:13.193 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:13.250 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:13.268 -05 000000087 INF: ===================Frame #67=================== 15-12-21 22:04:13.338 -05 000000048 INF: ===================Frame #72=================== 15-12-21 22:04:13.428 -05 000000087 INF: ===================Frame #79=================== 15-12-21 22:04:13.500 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:13.540 -05 000000079 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106, Registering and Extracting C035 L002 T1107=================== 15-12-21 22:04:13.541 -05 000000034 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105, Registering and Extracting C035 L002 T1106=================== 15-12-21 22:04:13.570 -05 000000023 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104, Registering and Extracting C035 L002 T1105=================== 15-12-21 22:04:13.578 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:13.579 -05 000000087 INF: ===================Frame #91=================== 15-12-21 22:04:13.598 -05 000000072 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1104=================== 15-12-21 22:04:13.606 -05 000000044 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103=================== 15-12-21 22:04:13.638 -05 000000051 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112=================== 15-12-21 22:04:13.638 -05 000000040 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112, Registering and Extracting C035 L002 T1113=================== 15-12-21 22:04:13.638 -05 000000077 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112, Registering and Extracting C035 L002 T1113, Registering and Extracting C035 L002 T1114=================== 15-12-21 22:04:13.640 -05 000000038 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112, Registering and Extracting C035 L002 T1113, Registering and Extracting C035 L002 T1114, Registering and Extracting C035 L002 T1115, Registering and Extracting C035 L002 T1116=================== 15-12-21 22:04:13.640 -05 000000066 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112, Registering and Extracting C035 L002 T1113, Registering and Extracting C035 L002 T1114, Registering and Extracting C035 L002 T1115, Registering and Extracting C035 L002 T1116=================== 15-12-21 22:04:13.730 -05 000000087 INF: ===================Frame #103=================== 15-12-21 22:04:13.736 -05 000000048 INF: ===================Frame #104=================== 15-12-21 22:04:13.828 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:13.846 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:13.882 -05 000000087 INF: ===================Frame #115=================== 15-12-21 22:04:13.890 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:13.891 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.846C:A1\r\n 15-12-21 22:04:13.891 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:14.032 -05 000000087 INF: ===================Frame #127=================== 15-12-21 22:04:14.178 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:14.179 -05 000000048 INF: ===================Frame #139=================== 15-12-21 22:04:14.183 -05 000000087 INF: ===================Frame #139=================== 15-12-21 22:04:14.231 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:14.253 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:14.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:14.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:14.331 -05 000000048 INF: ===================Frame #151=================== 15-12-21 22:04:14.333 -05 000000087 INF: ===================Frame #151=================== 15-12-21 22:04:14.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:14.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:14.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:14.532 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:14.533 -05 000000048 INF: ===================Frame #166=================== 15-12-21 22:04:14.533 -05 000000087 INF: ===================Frame #166=================== 15-12-21 22:04:14.592 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:14.612 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:14.653 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:14.653 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:14.842 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:14.903 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:15.047 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:15.129 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.822C:A1\r\n 15-12-21 22:04:15.129 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:15.153 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:15.245 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:15.392 -05 000000048 INF: ===================Frame #234=================== 15-12-21 22:04:15.495 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:15.562 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:15.794 -05 000000087 INF: ===================Frame #266=================== 15-12-21 22:04:15.812 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:15.933 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:15.959 -05 000000048 INF: ===================Frame #279=================== 15-12-21 22:04:15.963 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:15.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:15.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:16.102 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:16.110 -05 000000048 INF: ===================Frame #291=================== 15-12-21 22:04:16.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:16.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:16.183 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:16.220 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:16.245 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:16.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:16.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:16.261 -05 000000048 INF: ===================Frame #303=================== 15-12-21 22:04:16.412 -05 000000048 INF: ===================Frame #315=================== 15-12-21 22:04:16.495 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:16.497 -05 000000087 INF: ===================Frame #322=================== 15-12-21 22:04:16.555 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:16.563 -05 000000048 INF: ===================Frame #327=================== 15-12-21 22:04:16.572 -05 000000031 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112, Registering and Extracting C035 L002 T1113, Registering and Extracting C035 L002 T1114, Registering and Extracting C035 L002 T1115=================== 15-12-21 22:04:16.607 -05 000000088 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112, Registering and Extracting C035 L002 T1113, Registering and Extracting C035 L002 T1114=================== 15-12-21 22:04:16.714 -05 000000048 INF: ===================Frame #339=================== 15-12-21 22:04:16.805 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:16.814 -05 000000087 INF: ===================Frame #347=================== 15-12-21 22:04:16.867 -05 000000048 INF: ===================Frame #351=================== 15-12-21 22:04:16.869 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:16.869 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 22:04:16.965 -05 000000087 INF: ===================Frame #359=================== 15-12-21 22:04:16.969 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:04:17.017 -05 000000048 INF: ===================Frame #363=================== 15-12-21 22:04:17.052 -05 000000027 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112, Registering and Extracting C035 L002 T1113=================== 15-12-21 22:04:17.055 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 22:04:17.055 -05 000000057 INF: Current Position of Pump is: 45120 15-12-21 22:04:17.055 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:04:17.116 -05 000000087 INF: ===================Frame #371=================== 15-12-21 22:04:17.155 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:04:17.169 -05 000000048 INF: ===================Frame #375=================== 15-12-21 22:04:17.195 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:17.244 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:17.245 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 22:04:17.245 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:17.266 -05 000000087 INF: ===================Frame #383=================== 15-12-21 22:04:17.319 -05 000000048 INF: ===================Frame #387=================== 15-12-21 22:04:17.346 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:17.418 -05 000000087 INF: ===================Frame #395=================== 15-12-21 22:04:17.431 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:17.470 -05 000000048 INF: ===================Frame #399=================== 15-12-21 22:04:17.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:17.569 -05 000000087 INF: ===================Frame #406=================== 15-12-21 22:04:17.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:17.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:17.620 -05 000000048 INF: ===================Frame #411=================== 15-12-21 22:04:17.681 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:17.730 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:17.742 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:17.743 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:17.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:17.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:17.743 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:04:17.771 -05 000000048 INF: ===================Frame #423=================== 15-12-21 22:04:17.847 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:17.870 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:04:17.870 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:17.922 -05 000000048 INF: ===================Frame #434=================== 15-12-21 22:04:17.939 -05 000000087 INF: ===================Frame #436=================== 15-12-21 22:04:17.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:18.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:18.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:18.158 -05 000000087 INF: ===================Frame #453=================== 15-12-21 22:04:18.164 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:04:18.178 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:04:18.178 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:18.287 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:18.304 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:04:18.304 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:18.309 -05 000000087 INF: ===================Frame #465=================== 15-12-21 22:04:18.379 -05 000000048 INF: ===================Frame #471=================== 15-12-21 22:04:18.412 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:18.412 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:18.413 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:04:18.414 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle=================== 15-12-21 22:04:18.416 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:18.417 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:18.419 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:18.461 -05 000000087 INF: ===================Frame #477=================== 15-12-21 22:04:18.529 -05 000000048 INF: ===================Frame #482=================== 15-12-21 22:04:18.653 -05 000000087 INF: ===================Frame #492=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 450ms 15-12-21 22:04:18.905 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:18.974 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:18.974 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Selecting Reagent IMT (1)=================== 15-12-21 22:04:18.975 -05 000000057 INF: Valve A2: Go to position 1 15-12-21 22:04:18.975 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:04:19.034 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:19.036 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 6\r 15-12-21 22:04:19.036 -05 000000057 INF: Valve A2: 10.248 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:04:19.036 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 6 to 1 15-12-21 22:04:19.036 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC1\r 15-12-21 22:04:19.037 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:04:19.037 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:04:19.101 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.928C:A1\r\n 15-12-21 22:04:19.101 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:19.127 -05 000000040 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103, Registering and Extracting C035 L002 T1112=================== 15-12-21 22:04:19.140 -05 000000048 INF: ===================Frame #531=================== 15-12-21 22:04:19.199 -05 000000087 INF: ===================Frame #535=================== 15-12-21 22:04:19.279 -05 000000077 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102, Registering and Extracting C035 L002 T1103=================== 15-12-21 22:04:19.287 -05 000000038 INF: ===================Registering and Extracting C035 L002 T1101, Registering and Extracting C035 L002 T1102=================== 15-12-21 22:04:19.289 -05 000000066 INF: ===================Registering and Extracting C035 L002 T1101=================== 15-12-21 22:04:19.293 -05 000000048 INF: ===================Frame #543=================== 15-12-21 22:04:19.298 -05 000000051 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:04:19.332 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:19.349 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:19.349 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:19.350 -05 000000087 INF: ===================Frame #547=================== 15-12-21 22:04:19.374 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:19.381 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:04:19.443 -05 000000048 INF: ===================Frame #555=================== 15-12-21 22:04:19.451 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:19.476 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:19.476 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:19.500 -05 000000087 INF: ===================Frame #559=================== 15-12-21 22:04:19.571 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:19.577 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:04:19.580 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:19.595 -05 000000048 INF: ===================Frame #567=================== 15-12-21 22:04:19.599 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:19.599 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:19.651 -05 000000087 INF: ===================Frame #571=================== 15-12-21 22:04:19.745 -05 000000048 INF: ===================Frame #579=================== 15-12-21 22:04:19.801 -05 000000087 INF: ===================Frame #583=================== 15-12-21 22:04:19.840 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:19.846 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:04:19.896 -05 000000048 INF: ===================Frame #590=================== 15-12-21 22:04:19.954 -05 000000087 INF: ===================Frame #595=================== 15-12-21 22:04:19.971 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:19.986 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:04:20.100 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 1\r 15-12-21 22:04:20.101 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:20.101 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:04:20.101 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:20.104 -05 000000087 INF: ===================Frame #607=================== 15-12-21 22:04:20.131 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:20.160 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:04:20.160 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:20.241 -05 000000048 INF: ===================Frame #618=================== 15-12-21 22:04:20.254 -05 000000087 INF: ===================Frame #619=================== 15-12-21 22:04:20.268 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:20.286 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.858C:A1\r\n 15-12-21 22:04:20.286 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:20.396 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:04:20.404 -05 000000087 INF: ===================Frame #631=================== 15-12-21 22:04:20.473 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:04:20.473 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:20.475 -05 000000048 INF: ===================Frame #636=================== 15-12-21 22:04:20.555 -05 000000087 INF: ===================Frame #643=================== 15-12-21 22:04:20.577 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:20.596 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:04:20.596 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:20.677 -05 000000048 INF: ===================Frame #652=================== 15-12-21 22:04:20.699 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:20.699 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:04:20.700 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:20.706 -05 000000087 INF: ===================Frame #655=================== 15-12-21 22:04:20.783 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:20.791 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:04:20.838 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:20.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:20.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:20.856 -05 000000087 INF: ===================Frame #666=================== 15-12-21 22:04:20.882 -05 000000048 INF: ===================Frame #669=================== 15-12-21 22:04:20.883 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:04:20.960 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:20.971 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 22:04:20.971 -05 000000057 INF: Current Position of Pump is: 45120 15-12-21 22:04:20.971 -05 000000057 INF: Dispensing because using MultiAspirate and syringe is full 15-12-21 22:04:21.033 -05 000000048 INF: ===================Frame #680=================== 15-12-21 22:04:21.034 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:21.034 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:21.071 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 15-12-21 22:04:21.146 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:21.160 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:21.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:21.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:21.260 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:21.320 -05 000000048 INF: ===================Frame #703=================== 15-12-21 22:04:21.345 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:21.470 -05 000000048 INF: ===================Frame #715=================== 15-12-21 22:04:21.553 -05 000000087 INF: ===================Frame #721=================== 15-12-21 22:04:21.595 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:21.621 -05 000000048 INF: ===================Frame #727=================== 15-12-21 22:04:21.659 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:21.695 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:04:21.703 -05 000000087 INF: ===================Frame #733=================== 15-12-21 22:04:21.760 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 15-12-21 22:04:21.773 -05 000000048 INF: ===================Frame #739=================== 15-12-21 22:04:21.845 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:21.857 -05 000000087 INF: ===================Frame #746=================== 15-12-21 22:04:21.924 -05 000000048 INF: ===================Frame #751=================== 15-12-21 22:04:21.945 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:22.033 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:22.074 -05 000000048 INF: ===================Frame #763=================== 15-12-21 22:04:22.111 -05 000000087 INF: ===================Frame #766=================== 15-12-21 22:04:22.224 -05 000000048 INF: ===================Frame #775=================== 15-12-21 22:04:22.283 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:22.285 -05 000000087 INF: ===================Frame #779=================== 15-12-21 22:04:22.343 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:22.376 -05 000000048 INF: ===================Frame #787=================== 15-12-21 22:04:22.435 -05 000000087 INF: ===================Frame #791=================== 15-12-21 22:04:22.514 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:22.527 -05 000000048 INF: ===================Frame #799=================== 15-12-21 22:04:22.533 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:04:22.533 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:22.586 -05 000000087 INF: ===================Frame #803=================== 15-12-21 22:04:22.595 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:22.638 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:22.655 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:22.656 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:22.656 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:22.678 -05 000000048 INF: ===================Frame #810=================== 15-12-21 22:04:22.737 -05 000000087 INF: ===================Frame #815=================== 15-12-21 22:04:22.764 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:22.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:22.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:22.887 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:22.887 -05 000000087 INF: ===================Frame #827=================== 15-12-21 22:04:22.905 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:22.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:22.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:22.969 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:22.974 -05 000000048 INF: ===================Frame #834=================== 15-12-21 22:04:23.038 -05 000000087 INF: ===================Frame #839=================== 15-12-21 22:04:23.151 -05 000000048 INF: ===================Frame #848=================== 15-12-21 22:04:23.188 -05 000000087 INF: ===================Frame #851=================== 15-12-21 22:04:23.221 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:23.279 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:23.321 -05 000000048 INF: ===================Frame #861=================== 15-12-21 22:04:23.339 -05 000000087 INF: ===================Frame #863=================== 15-12-21 22:04:23.472 -05 000000048 INF: ===================Frame #873=================== 15-12-21 22:04:23.489 -05 000000087 INF: ===================Frame #875=================== 15-12-21 22:04:23.529 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:23.591 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:23.622 -05 000000048 INF: ===================Frame #885=================== 15-12-21 22:04:23.640 -05 000000087 INF: ===================Frame #886=================== 15-12-21 22:04:23.772 -05 000000048 INF: ===================Frame #897=================== 15-12-21 22:04:23.841 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:23.907 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:23.922 -05 000000048 INF: ===================Frame #909=================== 15-12-21 22:04:23.927 -05 000000087 INF: ===================Frame #909=================== 15-12-21 22:04:24.072 -05 000000048 INF: ===================Frame #921=================== 15-12-21 22:04:24.077 -05 000000087 INF: ===================Frame #921=================== 15-12-21 22:04:24.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:24.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:24.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:24.157 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:24.216 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:24.225 -05 000000048 INF: ===================Frame #933=================== 15-12-21 22:04:24.227 -05 000000087 INF: ===================Frame #933=================== 15-12-21 22:04:24.262 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:24.279 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.948C:A1\r\n 15-12-21 22:04:24.279 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:24.378 -05 000000048 INF: ===================Frame #945=================== 15-12-21 22:04:24.378 -05 000000087 INF: ===================Frame #945=================== 15-12-21 22:04:24.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:24.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:24.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:24.466 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:24.514 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:24.528 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:24.528 -05 000000087 INF: ===================Frame #957=================== 15-12-21 22:04:24.528 -05 000000048 INF: ===================Frame #957=================== 15-12-21 22:04:24.529 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:24.529 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:24.678 -05 000000087 INF: ===================Frame #969=================== 15-12-21 22:04:24.678 -05 000000048 INF: ===================Frame #969=================== 15-12-21 22:04:24.778 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:24.828 -05 000000087 INF: ===================Frame #980=================== 15-12-21 22:04:24.829 -05 000000048 INF: ===================Frame #980=================== 15-12-21 22:04:24.839 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:25.089 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:25.112 -05 000000087 INF: ===================Frame #1003=================== 15-12-21 22:04:25.147 -05 000000048 INF: ===================Frame #1006=================== 15-12-21 22:04:25.153 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:25.262 -05 000000087 INF: ===================Frame #1015=================== 15-12-21 22:04:25.323 -05 000000048 INF: ===================Frame #1020=================== 15-12-21 22:04:25.397 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:25.403 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:25.413 -05 000000087 INF: ===================Frame #1027=================== 15-12-21 22:04:25.465 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:25.466 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.306C:A1\r\n 15-12-21 22:04:25.466 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:25.487 -05 000000048 INF: ===================Frame #1033=================== 15-12-21 22:04:25.563 -05 000000087 INF: ===================Frame #1039=================== 15-12-21 22:04:25.637 -05 000000048 INF: ===================Frame #1044=================== 15-12-21 22:04:25.714 -05 000000087 INF: ===================Frame #1050=================== 15-12-21 22:04:25.715 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:25.758 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:25.776 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:25.777 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:25.777 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:25.811 -05 000000048 INF: ===================Frame #1058=================== 15-12-21 22:04:25.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:25.903 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:25.903 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:25.945 -05 000000087 INF: ===================Frame #1069=================== 15-12-21 22:04:25.975 -05 000000048 INF: ===================Frame #1071=================== 15-12-21 22:04:26.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:26.030 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:26.031 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:26.031 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:26.087 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:26.095 -05 000000087 INF: ===================Frame #1081=================== 15-12-21 22:04:26.125 -05 000000048 INF: ===================Frame #1083=================== 15-12-21 22:04:26.245 -05 000000087 INF: ===================Frame #1092=================== 15-12-21 22:04:26.275 -05 000000048 INF: ===================Frame #1095=================== 15-12-21 22:04:26.337 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:26.401 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:26.401 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 22:04:26.425 -05 000000048 INF: ===================Frame #1107=================== 15-12-21 22:04:26.437 -05 000000087 INF: ===================Frame #1108=================== 15-12-21 22:04:26.501 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P21120R\r 15-12-21 22:04:26.575 -05 000000048 INF: ===================Frame #1119=================== 15-12-21 22:04:26.588 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:26.603 -05 000000087 INF: ===================Frame #1121=================== 15-12-21 22:04:26.688 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:26.725 -05 000000048 INF: ===================Frame #1130=================== 15-12-21 22:04:26.753 -05 000000087 INF: ===================Frame #1133=================== 15-12-21 22:04:26.776 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:26.903 -05 000000087 INF: ===================Frame #1144=================== 15-12-21 22:04:26.947 -05 000000048 INF: ===================Frame #1148=================== 15-12-21 22:04:27.026 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:27.086 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:27.087 -05 000000087 INF: ===================Frame #1159=================== 15-12-21 22:04:27.114 -05 000000048 INF: ===================Frame #1161=================== 15-12-21 22:04:27.237 -05 000000087 INF: ===================Frame #1171=================== 15-12-21 22:04:27.253 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:27.266 -05 000000048 INF: ===================Frame #1173=================== 15-12-21 22:04:27.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:27.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:27.336 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:27.375 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:27.387 -05 000000087 INF: ===================Frame #1183=================== 15-12-21 22:04:27.398 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:27.399 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:27.399 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:27.416 -05 000000048 INF: ===================Frame #1185=================== 15-12-21 22:04:27.499 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:27.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:27.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:27.537 -05 000000087 INF: ===================Frame #1195=================== 15-12-21 22:04:27.566 -05 000000048 INF: ===================Frame #1197=================== 15-12-21 22:04:27.638 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:27.648 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:04:27.648 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:27.648 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:27.687 -05 000000087 INF: ===================Frame #1206=================== 15-12-21 22:04:27.712 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:27.716 -05 000000048 INF: ===================Frame #1209=================== 15-12-21 22:04:27.867 -05 000000048 INF: ===================Frame #1221=================== 15-12-21 22:04:27.904 -05 000000087 INF: ===================Frame #1224=================== 15-12-21 22:04:27.962 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:28.017 -05 000000048 INF: ===================Frame #1233=================== 15-12-21 22:04:28.023 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:28.070 -05 000000087 INF: ===================Frame #1237=================== 15-12-21 22:04:28.167 -05 000000048 INF: ===================Frame #1244=================== 15-12-21 22:04:28.220 -05 000000087 INF: ===================Frame #1249=================== 15-12-21 22:04:28.272 -05 000000009 INF: FPGA: Recv TDIYWAIT 15-12-21 22:04:28.272 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:28.273 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:28.274 -05 000000025 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:04:28.278 -05 000000092 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:04:28.278 -05 000000045 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:04:28.282 -05 000000092 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:04:28.282 -05 000000092 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:04:28.282 -05 000000092 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:04:28.283 -05 000000092 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:04:28.285 -05 000000045 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:04:28.285 -05 000000045 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:04:28.285 -05 000000045 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:04:28.287 -05 000000045 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:04:28.334 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:28.371 -05 000000087 INF: ===================Frame #1250=================== 15-12-21 22:04:28.397 -05 000000087 INF: Camera complete - got 1250 frames. 15-12-21 22:04:28.399 -05 000000087 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:04:28.457 -05 000000081 INF: FPGA: Recv EX1MV 15-12-21 22:04:28.457 -05 000000092 INF: Excitation Filter 1: Moved 36 steps in 174.9568 ms 15-12-21 22:04:28.458 -05 000000092 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 175.1251 ms 15-12-21 22:04:28.458 -05 000000092 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 175.2066 ms 15-12-21 22:04:28.458 -05 000000092 INF: ====================================== 15-12-21 22:04:28.520 -05 000000048 INF: ===================Frame #1250=================== 15-12-21 22:04:28.520 -05 000000087 INF: ===================Camera TDI=================== 15-12-21 22:04:28.528 -05 000000048 INF: Camera complete - got 1250 frames. 15-12-21 22:04:28.529 -05 000000048 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:04:28.542 -05 000000087 INF: ====================================== 15-12-21 22:04:28.584 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:28.644 -05 000000048 INF: ===================Camera TDI=================== 15-12-21 22:04:28.650 -05 000000049 INF: FPGA: Recv EX2MV 15-12-21 22:04:28.650 -05 000000045 INF: Excitation Filter 2: Moved 107 steps in 364.6125 ms 15-12-21 22:04:28.650 -05 000000045 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 364.7074 ms 15-12-21 22:04:28.650 -05 000000045 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 364.7846 ms 15-12-21 22:04:28.650 -05 000000045 INF: ====================================== 15-12-21 22:04:28.651 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:28.657 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:28.661 -05 000000025 INF: ====================================== 15-12-21 22:04:28.680 -05 000000048 INF: ====================================== 15-12-21 22:04:28.684 -05 000000064 INF: ===================Camera TDI=================== 15-12-21 22:04:28.690 -05 000000064 INF: ====================================== 15-12-21 22:04:28.763 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:28.777 -05 000000063 INF: Y Motor: Moved to 9.0764 after 16687 ms 15-12-21 22:04:28.778 -05 000000063 INF: ====================================== 15-12-21 22:04:28.780 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:28.782 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:28.783 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:28.784 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:04:28.832 -05 000000045 INF: FPGA: Recv TDICLINES 10828 15-12-21 22:04:28.832 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:04:28.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:28.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:28.896 -05 000000078 INF: FPGA: Recv TDIYERD 907646 15-12-21 22:04:28.896 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:04:28.901 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:28.978 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:28.987 -05 000000087 INF: FPGA: Recv ZADCR 38831 15-12-21 22:04:28.994 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.148. Y moved -60.304 mm 15-12-21 22:04:28.994 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:04:29.028 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:29.037 -05 000000058 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:04:29.037 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:04:29.057 -05 000000062 INF: TDIScan finished after 21822.0608 ms 15-12-21 22:04:29.058 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:04:29.065 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:04:29.068 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.101 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.990 um 15-12-21 22:04:29.101 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.102 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:29.102 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:29.104 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.105 -05 000000058 INF: ===================Dither Clean Up Command=================== 15-12-21 22:04:29.105 -05 000000024 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:04:29.105 -05 000000028 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:04:29.105 -05 000000024 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:04:29.106 -05 000000029 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:04:29.106 -05 000000056 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:29.106 -05 000000029 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:04:29.107 -05 000000056 INF: ===================LFT:Extracting coords=================== 15-12-21 22:04:29.107 -05 000000065 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:04:29.112 -05 000000065 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:04:29.139 -05 000000065 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:04:29.155 -05 000000056 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:29.157 -05 000000056 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:04:29.158 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:29.158 -05 000000033 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:29.159 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:29.159 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:29.159 -05 000000033 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:29.159 -05 000000086 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:29.161 -05 000000054 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:29.161 -05 000000054 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:29.161 -05 000000081 INF: FPGA: Recv ZSEL 15-12-21 22:04:29.162 -05 000000081 INF: FPGA: Recv ZSTEP 15-12-21 22:04:29.162 -05 000000024 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:04:29.162 -05 000000029 INF: FPGA: Xmit ZDACW 45304\n 15-12-21 22:04:29.162 -05 000000065 INF: ====================================== 15-12-21 22:04:29.163 -05 000000024 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:04:29.163 -05 000000028 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:04:29.163 -05 000000024 INF: ====================================== 15-12-21 22:04:29.220 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:29.224 -05 000000028 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:04:29.224 -05 000000074 INF: FPGA: Recv ZDACW 15-12-21 22:04:29.225 -05 000000028 INF: ====================================== 15-12-21 22:04:29.226 -05 000000029 INF: ====================================== 15-12-21 22:04:29.228 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:29.285 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:29.286 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:29.286 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:29.355 -05 000000033 INF: LFT found best fwhm score 2.680152 in 131 ms 15-12-21 22:04:29.355 -05 000000033 INF: LFT found good score at index 3213 with fwhm value 2.680152. Next cycle, cycle 36 starting Z position for top surface is at -0.175 mm FC:B, C:35,L:2,T 15-12-21 22:04:29.356 -05 000000033 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:29.356 -05 000000033 INF: ====================================== 15-12-21 22:04:29.359 -05 000000054 INF: LFT found best fwhm score 2.586106 in 134 ms 15-12-21 22:04:29.359 -05 000000054 INF: LFT found good score at index 3485 with fwhm value 2.586106. Next cycle, cycle 36 starting Z position for top surface is at -0.175 mm FC:B, C:35,L:2,T 15-12-21 22:04:29.360 -05 000000054 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:29.361 -05 000000054 INF: ====================================== 15-12-21 22:04:29.366 -05 000000055 INF: LFT found best fwhm score 2.619805 in 144 ms 15-12-21 22:04:29.366 -05 000000055 INF: LFT found good score at index 8941 with fwhm value 2.619805. Next cycle, cycle 36 starting Z position for top surface is at -0.174 mm FC:B, C:35,L:2,T 15-12-21 22:04:29.366 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:29.367 -05 000000055 INF: ====================================== 15-12-21 22:04:29.375 -05 000000086 INF: LFT found best fwhm score 2.285187 in 151 ms 15-12-21 22:04:29.375 -05 000000086 INF: LFT found good score at index 4585 with fwhm value 2.285187. Next cycle, cycle 36 starting Z position for top surface is at -0.175 mm FC:B, C:35,L:2,T 15-12-21 22:04:29.377 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:29.377 -05 000000086 INF: ====================================== 15-12-21 22:04:29.383 -05 000000056 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:29.386 -05 000000056 INF: LFT weighted average best Z for top surface is at -0.175mm FC:B, C:35,L:2,T 15-12-21 22:04:29.386 -05 000000056 INF: ====================================== 15-12-21 22:04:29.386 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:29.387 -05 000000058 INF: ====================================== 15-12-21 22:04:29.389 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.393 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:04:29.393 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.393 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:04:29.393 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.393 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:04:29.394 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.394 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:04:29.394 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.395 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:04:29.395 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:04:29.397 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 22:04:29.397 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 22:04:29.397 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:04:29.397 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:04:29.398 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:04:29.398 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:04:29.399 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:29.400 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:04:29.401 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:04:29.402 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface, Lane 2=================== 15-12-21 22:04:29.403 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Top Surface=================== 15-12-21 22:04:29.403 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging=================== 15-12-21 22:04:29.403 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface=================== 15-12-21 22:04:29.404 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface=================== 15-12-21 22:04:29.406 -05 000000062 INF: Compensator: Moving OutOfPath 15-12-21 22:04:29.406 -05 000000062 INF: FPGA: Xmit MIOCOMPR\n 15-12-21 22:04:29.413 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.980C:A1\r\n 15-12-21 22:04:29.413 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:29.535 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:29.610 -05 000000038 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203=================== 15-12-21 22:04:29.610 -05 000000040 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204=================== 15-12-21 22:04:29.610 -05 000000077 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203=================== 15-12-21 22:04:29.610 -05 000000051 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205=================== 15-12-21 22:04:29.610 -05 000000027 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206=================== 15-12-21 22:04:29.610 -05 000000066 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203=================== 15-12-21 22:04:29.612 -05 000000088 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1207=================== 15-12-21 22:04:29.616 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:29.617 -05 000000031 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1207, Registering and Extracting C035 L002 T1208=================== 15-12-21 22:04:29.801 -05 000000089 INF: FPGA: Recv MIOCOMPR 15-12-21 22:04:29.801 -05 000000062 INF: Compensator: Moved OutOfPath in 395 ms 15-12-21 22:04:29.802 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface=================== 15-12-21 22:04:29.826 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:04:29.827 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:04:29.828 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:04:29.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:04:29.839 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:04:29.840 -05 000000062 INF: Compensator: Remaining OutOfPath 15-12-21 22:04:29.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:04:29.842 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:04:29.867 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:29.916 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:04:29.918 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:04:29.925 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:29.933 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.934 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:04:29.934 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:29.934 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -172.8 um, section = A_1 15-12-21 22:04:29.944 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:29.945 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:29.980 -05 000000036 INF: ===================MoveEmissionFilters=================== 15-12-21 22:04:29.981 -05 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:29.981 -05 000000054 INF: ===================Move X,Y=================== 15-12-21 22:04:29.982 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:04:29.986 -05 000000065 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:04:29.986 -05 000000043 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:04:29.986 -05 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:04:29.986 -05 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:04:29.989 -05 000000074 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:04:29.989 -05 000000074 INF: Z Motor: Moving to -0.1212 mm, started at -0.1728 mm 15-12-21 22:04:29.990 -05 000000074 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:04:29.990 -05 000000054 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:04:29.990 -05 000000065 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:04:29.993 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:04:29.994 -05 000000043 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:04:30.000 -05 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:04:30.032 -05 000000037 INF: ===================Move Y Motor without settling=================== 15-12-21 22:04:30.032 -05 000000045 INF: ===================Move X Motor without settling=================== 15-12-21 22:04:30.032 -05 000000055 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:04:30.032 -05 000000041 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:04:30.032 -05 000000045 INF: X Motor: Xmit PR VM\n 15-12-21 22:04:30.032 -05 000000084 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:04:30.055 -05 000000063 INF: FPGA: Recv ZTRG 15-12-21 22:04:30.055 -05 000000048 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:04:30.055 -05 000000022 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:04:30.055 -05 000000058 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:04:30.055 -05 000000084 INF: ====================================== 15-12-21 22:04:30.055 -05 000000022 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:04:30.055 -05 000000068 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:04:30.056 -05 000000064 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:04:30.056 -05 000000074 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:04:30.056 -05 000000048 INF: ====================================== 15-12-21 22:04:30.056 -05 000000022 INF: ====================================== 15-12-21 22:04:30.070 -05 000000064 INF: ====================================== 15-12-21 22:04:30.075 -05 000000037 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:04:30.075 -05 000000055 INF: ====================================== 15-12-21 22:04:30.075 -05 000000037 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:04:30.076 -05 000000068 INF: ====================================== 15-12-21 22:04:30.076 -05 000000041 INF: ====================================== 15-12-21 22:04:30.076 -05 000000037 INF: Y Motor: Xmit 1G\n 15-12-21 22:04:30.091 -05 000000043 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:04:30.094 -05 000000058 INF: ====================================== 15-12-21 22:04:30.094 -05 000000045 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:04:30.094 -05 000000045 INF: X Motor: Xmit PR VI\n 15-12-21 22:04:30.095 -05 000000078 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:04:30.118 -05 000000063 INF: FPGA: Recv ZYT 15-12-21 22:04:30.118 -05 000000074 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:04:30.118 -05 000000074 INF: FPGA: Xmit ZMV 31776\n 15-12-21 22:04:30.118 -05 000000065 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:04:30.118 -05 000000043 INF: ====================================== 15-12-21 22:04:30.122 -05 000000037 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:04:30.123 -05 000000037 INF: Y Motor: Recv 1G\r\n 15-12-21 22:04:30.123 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:04:30.123 -05 000000078 INF: ====================================== 15-12-21 22:04:30.126 -05 000000037 INF: Y Motor: Xmit 1D\n 15-12-21 22:04:30.186 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:30.187 -05 000000045 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:04:30.187 -05 000000045 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:04:30.187 -05 000000045 INF: X Motor: Moving to 75.9620 mm @15.000 mm/sec, started at 81.0288 mm 15-12-21 22:04:30.187 -05 000000045 INF: X Motor: Xmit MA 6948\n 15-12-21 22:04:30.191 -05 000000065 INF: ====================================== 15-12-21 22:04:30.191 -05 000000025 INF: FPGA: Recv ZMV 15-12-21 22:04:30.191 -05 000000074 INF: Z Motor: MoveAndTrigger 'ZMV' command took 73.5193 ms 15-12-21 22:04:30.192 -05 000000074 INF: FPGA: Xmit ZDACR\n 15-12-21 22:04:30.208 -05 000000037 INF: Y Motor: Recv 1D\r\n 15-12-21 22:04:30.208 -05 000000056 INF: ====================================== 15-12-21 22:04:30.209 -05 000000037 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:04:30.245 -05 000000037 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:04:30.272 -05 000000089 INF: FPGA: Recv ZDACR 31776 15-12-21 22:04:30.272 -05 000000036 INF: ====================================== 15-12-21 22:04:30.272 -05 000000074 INF: Z Motor: MoveAndTrigger took 283.0374 ms w/comms 15-12-21 22:04:30.273 -05 000000074 INF: Z Motor: After move to -0.1212, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:04:30.273 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:30.273 -05 000000074 INF: Z Motor: MoveAbsStepped took 283.1353 ms 15-12-21 22:04:30.273 -05 000000045 INF: X Motor: Recv MA 6948\r\n> 15-12-21 22:04:30.278 -05 000000045 INF: X Motor: WaitUntilStopped 60338 15-12-21 22:04:30.303 -05 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:30.323 -05 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:04:30.356 -05 000000029 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:30.360 -05 000000081 INF: ===================Camera Arm TDI=================== 15-12-21 22:04:30.391 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:30.407 -05 000000029 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:04:30.422 -05 000000029 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:04:30.422 -05 000000029 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:04:30.479 -05 000000024 INF: FPGA: Recv ZSEL 15-12-21 22:04:30.528 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:30.529 -05 000000029 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:04:30.587 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:30.627 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:30.723 -05 000000029 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:04:30.727 -05 000000029 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:04:30.727 -05 000000029 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:04:30.767 -05 000000087 INF: FPGA: Recv ZSTEP 15-12-21 22:04:30.768 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:30.833 -05 000000029 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:04:30.835 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:30.842 -05 000000029 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:04:30.842 -05 000000029 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:04:30.842 -05 000000029 INF: Z Motor: Arming to move to -0.0812 mm 15-12-21 22:04:30.842 -05 000000029 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:04:30.877 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:30.877 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:30.893 -05 000000041 INF: FPGA: Recv ZYT 15-12-21 22:04:30.894 -05 000000029 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1332345 enc / 13.323 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:04:30.894 -05 000000029 INF: FPGA: Xmit ZARM 21290\n 15-12-21 22:04:30.895 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.323C:A1\r\n 15-12-21 22:04:30.895 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:30.959 -05 000000086 INF: FPGA: Recv ZARM 15-12-21 22:04:30.959 -05 000000029 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.7461 ms 15-12-21 22:04:30.959 -05 000000029 INF: Z Motor: ArmAbsStepped took 117.1224 ms 15-12-21 22:04:30.960 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:30.961 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:30.965 -05 000000029 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:30.970 -05 000000029 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:04:30.972 -05 000000029 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:30.977 -05 000000029 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:04:30.978 -05 000000029 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:30.980 -05 000000029 INF: ====================================== 15-12-21 22:04:31.162 -05 000000045 INF: X Motor: Xmit PR ER\n 15-12-21 22:04:31.181 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:31.239 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:31.243 -05 000000045 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:04:31.243 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:31.243 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:31.243 -05 000000045 INF: X Motor: Moved to 75.9629 after 965 ms 15-12-21 22:04:31.244 -05 000000045 INF: ====================================== 15-12-21 22:04:31.311 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:31.409 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:31.426 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:31.426 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:31.542 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:31.561 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:31.632 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:31.632 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:31.632 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:31.883 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:31.908 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:32.209 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:32.316 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:32.397 -05 000000081 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:04:32.397 -05 000000081 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:04:32.397 -05 000000081 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:04:32.566 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:32.625 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:32.877 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:32.917 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:32.937 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:32.938 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:04:32.938 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:33.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:33.065 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:33.065 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:33.166 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:33.187 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:33.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:33.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:33.250 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:33.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:33.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:33.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:33.500 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:33.561 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:33.811 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:33.872 -05 000000081 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:04:33.875 -05 000000081 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:04:33.875 -05 000000081 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:04:33.876 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:33.876 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:04:33.877 -05 000000081 INF: ====================================== 15-12-21 22:04:33.879 -05 000000074 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:33.881 -05 000000074 INF: ====================================== 15-12-21 22:04:33.976 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:04:33.999 -05 000000037 INF: Y Motor: Moved to 70.6885 after 3753 ms 15-12-21 22:04:34.003 -05 000000037 INF: ====================================== 15-12-21 22:04:34.005 -05 000000054 INF: ===================Move X,Y=================== 15-12-21 22:04:34.010 -05 000000054 INF: ====================================== 15-12-21 22:04:34.015 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:34.016 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:34.016 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:04:34.059 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:04:34.059 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 22:04:34.059 -05 000000057 INF: Current Position of Pump is: 21120 15-12-21 22:04:34.059 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:04:34.060 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:04:34.123 -05 000000092 INF: FPGA: Recv ZFREQCL 15-12-21 22:04:34.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:04:34.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:34.125 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:04:34.159 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:04:34.178 -05 000000040 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1207=================== 15-12-21 22:04:34.185 -05 000000024 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:04:34.185 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:04:34.186 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:34.187 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:34.195 -05 000000045 INF: ===================TDI FPGA Arm=================== 15-12-21 22:04:34.195 -05 000000081 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:04:34.197 -05 000000081 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:04:34.201 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:34.206 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:04:34.211 -05 000000045 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:04:34.223 -05 000000072 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1207, Registering and Extracting C035 L002 T1209=================== 15-12-21 22:04:34.253 -05 000000065 INF: FPGA: Recv TDIYPOS 15-12-21 22:04:34.254 -05 000000081 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:04:34.254 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:34.254 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:34.255 -05 000000081 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:04:34.255 -05 000000081 INF: ====================================== 15-12-21 22:04:34.262 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:04:34.263 -05 000000045 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:04:34.310 -05 000000058 INF: FPGA: Recv TDIYARM3 15-12-21 22:04:34.311 -05 000000045 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:34.315 -05 000000045 INF: ===================TDI FPGA Arm=================== 15-12-21 22:04:34.317 -05 000000045 INF: ====================================== 15-12-21 22:04:34.319 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:34.324 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:34.324 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:34.326 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:34.327 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:34.328 -05 000000055 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:04:34.329 -05 000000055 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:04:34.329 -05 000000055 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:04:34.329 -05 000000055 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:04:34.329 -05 000000055 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:04:34.329 -05 000000028 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:04:34.330 -05 000000028 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:04:34.330 -05 000000028 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:04:34.330 -05 000000028 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:04:34.331 -05 000000028 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:04:34.345 -05 000000051 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1207=================== 15-12-21 22:04:34.374 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:34.457 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:04:34.457 -05 000000044 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1207, Registering and Extracting C035 L002 T1210=================== 15-12-21 22:04:34.511 -05 000000054 INF: FPGA: Recv EX1MV 15-12-21 22:04:34.511 -05 000000028 INF: Excitation Filter 1: Moved -36 steps in 181.3316 ms 15-12-21 22:04:34.511 -05 000000028 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 181.5953 ms 15-12-21 22:04:34.511 -05 000000028 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 181.6827 ms 15-12-21 22:04:34.512 -05 000000028 INF: ====================================== 15-12-21 22:04:34.621 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:34.639 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.999C:A1\r\n 15-12-21 22:04:34.639 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:34.699 -05 000000089 INF: FPGA: Recv EX2MV 15-12-21 22:04:34.699 -05 000000055 INF: Excitation Filter 2: Moved -107 steps in 370.2727 ms 15-12-21 22:04:34.699 -05 000000055 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 370.438 ms 15-12-21 22:04:34.699 -05 000000055 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.6098 ms 15-12-21 22:04:34.700 -05 000000055 INF: ====================================== 15-12-21 22:04:34.703 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:34.708 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:04:34.709 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:34.713 -05 000000063 INF: ===================FPGA Z Wait=================== 15-12-21 22:04:34.713 -05 000000087 INF: ===================Move Y Motor without settling=================== 15-12-21 22:04:34.713 -05 000000043 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:34.714 -05 000000063 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:04:34.714 -05 000000065 INF: ===================Camera TDI=================== 15-12-21 22:04:34.718 -05 000000087 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:04:34.719 -05 000000087 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:04:34.719 -05 000000043 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:04:34.721 -05 000000087 INF: Y Motor: Xmit 1G\n 15-12-21 22:04:34.721 -05 000000043 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:04:34.722 -05 000000065 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:04:34.723 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 22:04:34.728 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 22:04:34.774 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:34.775 -05 000000087 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:04:34.775 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:04:34.775 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:34.776 -05 000000087 INF: Y Motor: Recv 1G\r\n 15-12-21 22:04:34.796 -05 000000087 INF: Y Motor: Xmit 1D\n 15-12-21 22:04:34.796 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:04:34.824 -05 000000087 INF: Y Motor: Recv 1D\r\n 15-12-21 22:04:34.827 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:34.827 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:34.834 -05 000000027 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1207=================== 15-12-21 22:04:34.835 -05 000000077 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206=================== 15-12-21 22:04:34.897 -05 000000020 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211, Registering and Extracting C035 L002 T1212=================== 15-12-21 22:04:34.897 -05 000000034 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211, Registering and Extracting C035 L002 T1212=================== 15-12-21 22:04:34.911 -05 000000087 INF: Y Motor: Recv *407662\r\n 15-12-21 22:04:34.912 -05 000000087 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:04:34.998 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:35.027 -05 000000054 INF: FPGA: Recv ZWAIT 15-12-21 22:04:35.028 -05 000000063 INF: ====================================== 15-12-21 22:04:35.029 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:04:35.029 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:35.196 -05 000000041 INF: ===================Frame #2=================== 15-12-21 22:04:35.197 -05 000000037 INF: ===================Frame #2=================== 15-12-21 22:04:35.198 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:35.292 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:35.309 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:35.407 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:04:35.411 -05 000000038 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211=================== 15-12-21 22:04:35.439 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:04:35.439 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:35.463 -05 000000041 INF: ===================Frame #23=================== 15-12-21 22:04:35.463 -05 000000037 INF: ===================Frame #23=================== 15-12-21 22:04:35.511 -05 000000082 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211, Registering and Extracting C035 L002 T1213=================== 15-12-21 22:04:35.586 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:35.614 -05 000000037 INF: ===================Frame #35=================== 15-12-21 22:04:35.615 -05 000000041 INF: ===================Frame #35=================== 15-12-21 22:04:35.650 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:35.650 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:35.750 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:04:35.777 -05 000000037 INF: ===================Frame #48=================== 15-12-21 22:04:35.777 -05 000000041 INF: ===================Frame #48=================== 15-12-21 22:04:35.779 -05 000000066 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211=================== 15-12-21 22:04:35.779 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:04:35.779 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:35.811 -05 000000047 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211, Registering and Extracting C035 L002 T1214=================== 15-12-21 22:04:35.875 -05 000000031 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211=================== 15-12-21 22:04:35.911 -05 000000023 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211, Registering and Extracting C035 L002 T1215=================== 15-12-21 22:04:35.941 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:35.942 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:35.945 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:35.945 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:04:35.949 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:04:35.950 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°, FC temperature to 65°=================== 15-12-21 22:04:35.951 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:65.00\r 15-12-21 22:04:36.035 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:04:36.035 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:36.075 -05 000000088 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211=================== 15-12-21 22:04:36.133 -05 000000079 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211, Registering and Extracting C035 L002 T1216=================== 15-12-21 22:04:36.142 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:0:1\r 15-12-21 22:04:36.215 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:04:36.215 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:36.341 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:36.342 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:04:36.342 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:04:36.373 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:04:36.373 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.867C:A1\r\n 15-12-21 22:04:36.373 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:36.373 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:04:36.375 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:36.375 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:36.376 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:36.390 -05 000000057 INF: WaitCommand(25000) start 15-12-21 22:04:36.404 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 25 of 25 seconds left=================== 15-12-21 22:04:36.527 -05 000000041 INF: ===================Frame #107=================== 15-12-21 22:04:36.629 -05 000000037 INF: ===================Frame #115=================== 15-12-21 22:04:36.697 -05 000000041 INF: ===================Frame #121=================== 15-12-21 22:04:36.787 -05 000000037 INF: ===================Frame #128=================== 15-12-21 22:04:36.847 -05 000000041 INF: ===================Frame #133=================== 15-12-21 22:04:36.936 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:36.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:36.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:36.998 -05 000000041 INF: ===================Frame #145=================== 15-12-21 22:04:37.089 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:37.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:37.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:37.149 -05 000000041 INF: ===================Frame #156=================== 15-12-21 22:04:37.209 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:37.229 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:37.229 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:37.446 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:37.446 -05 000000037 INF: ===================Frame #180=================== 15-12-21 22:04:37.446 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 24 of 25 seconds left=================== 15-12-21 22:04:37.929 -05 000000037 INF: ===================Frame #218=================== 15-12-21 22:04:37.993 -05 000000041 INF: ===================Frame #223=================== 15-12-21 22:04:38.036 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:38.081 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:04:38.081 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:38.144 -05 000000041 INF: ===================Frame #235=================== 15-12-21 22:04:38.181 -05 000000037 INF: ===================Frame #238=================== 15-12-21 22:04:38.295 -05 000000041 INF: ===================Frame #247=================== 15-12-21 22:04:38.375 -05 000000037 INF: ===================Frame #253=================== 15-12-21 22:04:38.449 -05 000000041 INF: ===================Frame #259=================== 15-12-21 22:04:38.450 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:38.450 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 23 of 25 seconds left=================== 15-12-21 22:04:38.487 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:38.526 -05 000000037 INF: ===================Frame #265=================== 15-12-21 22:04:38.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:38.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:38.601 -05 000000041 INF: ===================Frame #271=================== 15-12-21 22:04:38.674 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:38.678 -05 000000037 INF: ===================Frame #277=================== 15-12-21 22:04:38.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:38.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:38.752 -05 000000041 INF: ===================Frame #283=================== 15-12-21 22:04:38.795 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:38.820 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:38.820 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:38.832 -05 000000037 INF: ===================Frame #289=================== 15-12-21 22:04:38.903 -05 000000041 INF: ===================Frame #295=================== 15-12-21 22:04:38.982 -05 000000037 INF: ===================Frame #301=================== 15-12-21 22:04:39.053 -05 000000041 INF: ===================Frame #307=================== 15-12-21 22:04:39.131 -05 000000044 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206, Registering and Extracting C035 L002 T1211=================== 15-12-21 22:04:39.132 -05 000000072 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205, Registering and Extracting C035 L002 T1206=================== 15-12-21 22:04:39.134 -05 000000037 INF: ===================Frame #313=================== 15-12-21 22:04:39.204 -05 000000041 INF: ===================Frame #319=================== 15-12-21 22:04:39.287 -05 000000037 INF: ===================Frame #326=================== 15-12-21 22:04:39.359 -05 000000041 INF: ===================Frame #331=================== 15-12-21 22:04:39.405 -05 000000034 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204, Registering and Extracting C035 L002 T1205=================== 15-12-21 22:04:39.450 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:39.451 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 22 of 25 seconds left=================== 15-12-21 22:04:39.510 -05 000000041 INF: ===================Frame #343=================== 15-12-21 22:04:39.550 -05 000000020 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203, Registering and Extracting C035 L002 T1204=================== 15-12-21 22:04:39.661 -05 000000041 INF: ===================Frame #355=================== 15-12-21 22:04:39.664 -05 000000037 INF: ===================Frame #355=================== 15-12-21 22:04:39.775 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:39.812 -05 000000041 INF: ===================Frame #367=================== 15-12-21 22:04:39.814 -05 000000037 INF: ===================Frame #367=================== 15-12-21 22:04:39.818 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.034C:A1\r\n 15-12-21 22:04:39.818 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:39.826 -05 000000082 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202, Registering and Extracting C035 L002 T1203=================== 15-12-21 22:04:39.963 -05 000000041 INF: ===================Frame #379=================== 15-12-21 22:04:39.964 -05 000000037 INF: ===================Frame #379=================== 15-12-21 22:04:40.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:40.067 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:40.067 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:40.114 -05 000000037 INF: ===================Frame #391=================== 15-12-21 22:04:40.114 -05 000000041 INF: ===================Frame #391=================== 15-12-21 22:04:40.174 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:40.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:40.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:40.267 -05 000000037 INF: ===================Frame #403=================== 15-12-21 22:04:40.267 -05 000000041 INF: ===================Frame #403=================== 15-12-21 22:04:40.300 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:40.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:40.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:40.418 -05 000000041 INF: ===================Frame #415=================== 15-12-21 22:04:40.418 -05 000000037 INF: ===================Frame #415=================== 15-12-21 22:04:40.442 -05 000000047 INF: ===================Registering and Extracting C035 L002 T1201, Registering and Extracting C035 L002 T1202=================== 15-12-21 22:04:40.451 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:40.451 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 21 of 25 seconds left=================== 15-12-21 22:04:40.568 -05 000000041 INF: ===================Frame #427=================== 15-12-21 22:04:40.568 -05 000000037 INF: ===================Frame #427=================== 15-12-21 22:04:40.719 -05 000000037 INF: ===================Frame #439=================== 15-12-21 22:04:40.719 -05 000000041 INF: ===================Frame #439=================== 15-12-21 22:04:40.869 -05 000000037 INF: ===================Frame #451=================== 15-12-21 22:04:40.870 -05 000000041 INF: ===================Frame #451=================== 15-12-21 22:04:40.980 -05 000000023 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:04:40.980 -05 000000079 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:04:41.007 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:41.015 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:04:41.019 -05 000000037 INF: ===================Frame #462=================== 15-12-21 22:04:41.020 -05 000000041 INF: ===================Frame #463=================== 15-12-21 22:04:41.170 -05 000000041 INF: ===================Frame #474=================== 15-12-21 22:04:41.176 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:41.186 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:04:41.309 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:41.315 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:04:41.336 -05 000000037 INF: ===================Frame #487=================== 15-12-21 22:04:41.437 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:41.446 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:04:41.452 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:41.453 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 20 of 25 seconds left=================== 15-12-21 22:04:41.486 -05 000000037 INF: ===================Frame #499=================== 15-12-21 22:04:41.551 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:41.554 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:41.566 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:41.566 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:41.637 -05 000000037 INF: ===================Frame #511=================== 15-12-21 22:04:41.670 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:41.758 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 63.519C:A1\r\n 15-12-21 22:04:41.758 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:41.790 -05 000000037 INF: ===================Frame #523=================== 15-12-21 22:04:41.843 -05 000000041 INF: ===================Frame #528=================== 15-12-21 22:04:41.866 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:41.940 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:41.940 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:41.941 -05 000000037 INF: ===================Frame #535=================== 15-12-21 22:04:42.046 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:42.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:42.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:42.093 -05 000000037 INF: ===================Frame #547=================== 15-12-21 22:04:42.113 -05 000000041 INF: ===================Frame #549=================== 15-12-21 22:04:42.244 -05 000000037 INF: ===================Frame #559=================== 15-12-21 22:04:42.263 -05 000000041 INF: ===================Frame #561=================== 15-12-21 22:04:42.396 -05 000000037 INF: ===================Frame #571=================== 15-12-21 22:04:42.413 -05 000000041 INF: ===================Frame #573=================== 15-12-21 22:04:42.434 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:04:42.454 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:42.454 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 19 of 25 seconds left=================== 15-12-21 22:04:42.546 -05 000000037 INF: ===================Frame #583=================== 15-12-21 22:04:42.564 -05 000000041 INF: ===================Frame #585=================== 15-12-21 22:04:42.698 -05 000000037 INF: ===================Frame #595=================== 15-12-21 22:04:42.714 -05 000000041 INF: ===================Frame #596=================== 15-12-21 22:04:42.850 -05 000000037 INF: ===================Frame #607=================== 15-12-21 22:04:42.977 -05 000000041 INF: ===================Frame #617=================== 15-12-21 22:04:43.000 -05 000000037 INF: ===================Frame #619=================== 15-12-21 22:04:43.127 -05 000000041 INF: ===================Frame #629=================== 15-12-21 22:04:43.151 -05 000000037 INF: ===================Frame #631=================== 15-12-21 22:04:43.278 -05 000000041 INF: ===================Frame #641=================== 15-12-21 22:04:43.294 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:43.301 -05 000000037 INF: ===================Frame #643=================== 15-12-21 22:04:43.315 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.986C:A1\r\n 15-12-21 22:04:43.315 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:43.417 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:43.428 -05 000000041 INF: ===================Frame #653=================== 15-12-21 22:04:43.442 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:43.442 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:43.451 -05 000000037 INF: ===================Frame #655=================== 15-12-21 22:04:43.454 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:43.454 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 18 of 25 seconds left=================== 15-12-21 22:04:43.543 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:43.563 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:43.563 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:43.578 -05 000000041 INF: ===================Frame #665=================== 15-12-21 22:04:43.603 -05 000000037 INF: ===================Frame #667=================== 15-12-21 22:04:43.668 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:43.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:43.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:43.728 -05 000000041 INF: ===================Frame #677=================== 15-12-21 22:04:43.753 -05 000000037 INF: ===================Frame #679=================== 15-12-21 22:04:43.879 -05 000000041 INF: ===================Frame #689=================== 15-12-21 22:04:43.903 -05 000000037 INF: ===================Frame #690=================== 15-12-21 22:04:44.029 -05 000000041 INF: ===================Frame #700=================== 15-12-21 22:04:44.454 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:44.454 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 17 of 25 seconds left=================== 15-12-21 22:04:44.455 -05 000000041 INF: ===================Frame #734=================== 15-12-21 22:04:44.504 -05 000000037 INF: ===================Frame #738=================== 15-12-21 22:04:44.648 -05 000000041 INF: ===================Frame #749=================== 15-12-21 22:04:44.726 -05 000000037 INF: ===================Frame #756=================== 15-12-21 22:04:44.799 -05 000000041 INF: ===================Frame #761=================== 15-12-21 22:04:44.906 -05 000000037 INF: ===================Frame #770=================== 15-12-21 22:04:44.919 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:44.949 -05 000000041 INF: ===================Frame #773=================== 15-12-21 22:04:44.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:44.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:45.070 -05 000000037 INF: ===================Frame #783=================== 15-12-21 22:04:45.100 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:45.100 -05 000000041 INF: ===================Frame #785=================== 15-12-21 22:04:45.121 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.012C:A1\r\n 15-12-21 22:04:45.121 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:45.220 -05 000000037 INF: ===================Frame #795=================== 15-12-21 22:04:45.223 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:45.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:45.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:45.250 -05 000000041 INF: ===================Frame #797=================== 15-12-21 22:04:45.355 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:45.370 -05 000000037 INF: ===================Frame #806=================== 15-12-21 22:04:45.373 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:45.373 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:45.400 -05 000000041 INF: ===================Frame #809=================== 15-12-21 22:04:45.455 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:45.455 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 16 of 25 seconds left=================== 15-12-21 22:04:45.550 -05 000000041 INF: ===================Frame #821=================== 15-12-21 22:04:45.567 -05 000000037 INF: ===================Frame #822=================== 15-12-21 22:04:45.701 -05 000000041 INF: ===================Frame #833=================== 15-12-21 22:04:45.740 -05 000000037 INF: ===================Frame #836=================== 15-12-21 22:04:45.851 -05 000000041 INF: ===================Frame #844=================== 15-12-21 22:04:45.908 -05 000000037 INF: ===================Frame #849=================== 15-12-21 22:04:46.058 -05 000000037 INF: ===================Frame #861=================== 15-12-21 22:04:46.132 -05 000000041 INF: ===================Frame #867=================== 15-12-21 22:04:46.209 -05 000000037 INF: ===================Frame #873=================== 15-12-21 22:04:46.283 -05 000000041 INF: ===================Frame #879=================== 15-12-21 22:04:46.361 -05 000000037 INF: ===================Frame #885=================== 15-12-21 22:04:46.434 -05 000000041 INF: ===================Frame #891=================== 15-12-21 22:04:46.455 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:46.455 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 15 of 25 seconds left=================== 15-12-21 22:04:46.511 -05 000000037 INF: ===================Frame #897=================== 15-12-21 22:04:46.584 -05 000000041 INF: ===================Frame #902=================== 15-12-21 22:04:46.595 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:46.621 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:46.621 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:46.662 -05 000000037 INF: ===================Frame #909=================== 15-12-21 22:04:46.729 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:46.801 -05 000000041 INF: ===================Frame #920=================== 15-12-21 22:04:46.806 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:46.806 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:46.812 -05 000000037 INF: ===================Frame #920=================== 15-12-21 22:04:46.908 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:46.935 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.833C:A1\r\n 15-12-21 22:04:46.935 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:46.986 -05 000000041 INF: ===================Frame #934=================== 15-12-21 22:04:47.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:47.057 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:47.057 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:47.090 -05 000000037 INF: ===================Frame #942=================== 15-12-21 22:04:47.152 -05 000000041 INF: ===================Frame #947=================== 15-12-21 22:04:47.262 -05 000000037 INF: ===================Frame #956=================== 15-12-21 22:04:47.303 -05 000000041 INF: ===================Frame #959=================== 15-12-21 22:04:47.426 -05 000000037 INF: ===================Frame #969=================== 15-12-21 22:04:47.453 -05 000000041 INF: ===================Frame #971=================== 15-12-21 22:04:47.455 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:47.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 14 of 25 seconds left=================== 15-12-21 22:04:47.576 -05 000000037 INF: ===================Frame #981=================== 15-12-21 22:04:47.603 -05 000000041 INF: ===================Frame #983=================== 15-12-21 22:04:47.726 -05 000000037 INF: ===================Frame #993=================== 15-12-21 22:04:47.753 -05 000000041 INF: ===================Frame #995=================== 15-12-21 22:04:47.876 -05 000000037 INF: ===================Frame #1005=================== 15-12-21 22:04:47.903 -05 000000041 INF: ===================Frame #1007=================== 15-12-21 22:04:48.026 -05 000000037 INF: ===================Frame #1016=================== 15-12-21 22:04:48.053 -05 000000041 INF: ===================Frame #1019=================== 15-12-21 22:04:48.203 -05 000000041 INF: ===================Frame #1030=================== 15-12-21 22:04:48.233 -05 000000037 INF: ===================Frame #1033=================== 15-12-21 22:04:48.280 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:48.305 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:48.305 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:48.384 -05 000000037 INF: ===================Frame #1045=================== 15-12-21 22:04:48.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:48.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:48.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:48.451 -05 000000041 INF: ===================Frame #1050=================== 15-12-21 22:04:48.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:48.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 13 of 25 seconds left=================== 15-12-21 22:04:48.527 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:48.535 -05 000000037 INF: ===================Frame #1057=================== 15-12-21 22:04:48.554 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:04:48.554 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:48.619 -05 000000041 INF: ===================Frame #1063=================== 15-12-21 22:04:48.650 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:48.679 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:48.679 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:48.685 -05 000000037 INF: ===================Frame #1069=================== 15-12-21 22:04:48.769 -05 000000041 INF: ===================Frame #1075=================== 15-12-21 22:04:48.835 -05 000000037 INF: ===================Frame #1080=================== 15-12-21 22:04:48.919 -05 000000041 INF: ===================Frame #1087=================== 15-12-21 22:04:49.051 -05 000000037 INF: ===================Frame #1097=================== 15-12-21 22:04:49.069 -05 000000041 INF: ===================Frame #1099=================== 15-12-21 22:04:49.202 -05 000000037 INF: ===================Frame #1109=================== 15-12-21 22:04:49.219 -05 000000041 INF: ===================Frame #1111=================== 15-12-21 22:04:49.352 -05 000000037 INF: ===================Frame #1121=================== 15-12-21 22:04:49.369 -05 000000041 INF: ===================Frame #1123=================== 15-12-21 22:04:49.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:49.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 12 of 25 seconds left=================== 15-12-21 22:04:49.503 -05 000000037 INF: ===================Frame #1133=================== 15-12-21 22:04:49.519 -05 000000041 INF: ===================Frame #1134=================== 15-12-21 22:04:49.653 -05 000000037 INF: ===================Frame #1145=================== 15-12-21 22:04:49.773 -05 000000041 INF: ===================Frame #1155=================== 15-12-21 22:04:49.803 -05 000000037 INF: ===================Frame #1157=================== 15-12-21 22:04:49.900 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:49.925 -05 000000041 INF: ===================Frame #1166=================== 15-12-21 22:04:49.928 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:49.928 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:49.953 -05 000000037 INF: ===================Frame #1169=================== 15-12-21 22:04:50.028 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:50.053 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:50.053 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:50.103 -05 000000037 INF: ===================Frame #1181=================== 15-12-21 22:04:50.114 -05 000000041 INF: ===================Frame #1181=================== 15-12-21 22:04:50.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:50.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:50.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:50.253 -05 000000037 INF: ===================Frame #1192=================== 15-12-21 22:04:50.264 -05 000000041 INF: ===================Frame #1193=================== 15-12-21 22:04:50.280 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:50.304 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.995C:A1\r\n 15-12-21 22:04:50.304 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:50.414 -05 000000041 INF: ===================Frame #1205=================== 15-12-21 22:04:50.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:50.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 11 of 25 seconds left=================== 15-12-21 22:04:50.539 -05 000000037 INF: ===================Frame #1215=================== 15-12-21 22:04:50.566 -05 000000041 INF: ===================Frame #1217=================== 15-12-21 22:04:50.689 -05 000000037 INF: ===================Frame #1227=================== 15-12-21 22:04:50.716 -05 000000041 INF: ===================Frame #1229=================== 15-12-21 22:04:50.840 -05 000000037 INF: ===================Frame #1239=================== 15-12-21 22:04:50.866 -05 000000041 INF: ===================Frame #1241=================== 15-12-21 22:04:50.988 -05 000000092 INF: FPGA: Recv TDIYWAIT 15-12-21 22:04:50.988 -05 000000043 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:50.990 -05 000000043 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:04:50.991 -05 000000037 INF: ===================Frame #1250=================== 15-12-21 22:04:50.992 -05 000000036 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:04:50.992 -05 000000048 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:04:50.992 -05 000000036 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:04:50.992 -05 000000036 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:04:50.992 -05 000000036 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:04:50.995 -05 000000036 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:04:50.995 -05 000000048 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:04:50.995 -05 000000048 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:04:50.997 -05 000000048 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:04:50.997 -05 000000048 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:04:51.016 -05 000000041 INF: ===================Frame #1250=================== 15-12-21 22:04:51.090 -05 000000037 INF: Camera complete - got 1250 frames. 15-12-21 22:04:51.091 -05 000000037 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:04:51.153 -05 000000041 INF: Camera complete - got 1250 frames. 15-12-21 22:04:51.154 -05 000000041 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:04:51.173 -05 000000061 INF: FPGA: Recv EX1MV 15-12-21 22:04:51.173 -05 000000036 INF: Excitation Filter 1: Moved 36 steps in 181.4646 ms 15-12-21 22:04:51.173 -05 000000036 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 181.5445 ms 15-12-21 22:04:51.173 -05 000000036 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 181.6082 ms 15-12-21 22:04:51.174 -05 000000036 INF: ====================================== 15-12-21 22:04:51.213 -05 000000037 INF: ===================Camera TDI=================== 15-12-21 22:04:51.234 -05 000000037 INF: ====================================== 15-12-21 22:04:51.332 -05 000000041 INF: ===================Camera TDI=================== 15-12-21 22:04:51.352 -05 000000041 INF: ====================================== 15-12-21 22:04:51.353 -05 000000065 INF: ===================Camera TDI=================== 15-12-21 22:04:51.357 -05 000000065 INF: ====================================== 15-12-21 22:04:51.359 -05 000000054 INF: FPGA: Recv EX2MV 15-12-21 22:04:51.359 -05 000000048 INF: Excitation Filter 2: Moved 107 steps in 362.9406 ms 15-12-21 22:04:51.360 -05 000000048 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 364.7928 ms 15-12-21 22:04:51.360 -05 000000048 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 364.885 ms 15-12-21 22:04:51.360 -05 000000048 INF: ====================================== 15-12-21 22:04:51.361 -05 000000043 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:51.368 -05 000000043 INF: ====================================== 15-12-21 22:04:51.404 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:51.424 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:51.424 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:51.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:51.457 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 10 of 25 seconds left=================== 15-12-21 22:04:51.527 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:51.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:51.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:51.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:51.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:51.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:51.739 -05 000000087 INF: Y Motor: Moved to 9.0765 after 16825 ms 15-12-21 22:04:51.740 -05 000000087 INF: ====================================== 15-12-21 22:04:51.742 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:51.747 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:51.749 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:51.749 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:04:51.802 -05 000000056 INF: FPGA: Recv TDICLINES 8933 15-12-21 22:04:51.802 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:04:51.860 -05 000000028 INF: FPGA: Recv TDIYERD 907647 15-12-21 22:04:51.860 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:04:51.992 -05 000000092 INF: FPGA: Recv ZADCR 25324 15-12-21 22:04:51.993 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.097. Y moved -60.304 mm 15-12-21 22:04:51.993 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:04:52.043 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:52.081 -05 000000056 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:04:52.089 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:04:52.122 -05 000000062 INF: TDIScan finished after 22202.834 ms 15-12-21 22:04:52.140 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 66.051C:A1\r\n 15-12-21 22:04:52.156 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:52.181 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:04:52.190 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:04:52.362 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.408 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.195 um 15-12-21 22:04:52.408 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.413 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.415 -05 000000086 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:04:52.415 -05 000000009 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:04:52.415 -05 000000064 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:04:52.415 -05 000000086 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:04:52.415 -05 000000063 INF: ===================Dither Clean Up Command=================== 15-12-21 22:04:52.415 -05 000000064 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:04:52.415 -05 000000064 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:04:52.417 -05 000000037 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:52.417 -05 000000037 INF: ===================LFT:Extracting coords=================== 15-12-21 22:04:52.419 -05 000000033 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:04:52.425 -05 000000033 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:04:52.452 -05 000000058 INF: FPGA: Recv ZSTEP 15-12-21 22:04:52.452 -05 000000058 INF: FPGA: Recv ZSEL 15-12-21 22:04:52.452 -05 000000033 INF: FPGA: Xmit ZDACW 31776\n 15-12-21 22:04:52.453 -05 000000086 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:04:52.453 -05 000000064 INF: ====================================== 15-12-21 22:04:52.454 -05 000000086 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:04:52.454 -05 000000009 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:04:52.454 -05 000000086 INF: ====================================== 15-12-21 22:04:52.460 -05 000000037 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:52.461 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:52.461 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 9 of 25 seconds left=================== 15-12-21 22:04:52.461 -05 000000037 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:04:52.463 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:52.463 -05 000000036 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:52.464 -05 000000022 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:52.464 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:52.464 -05 000000036 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:52.464 -05 000000028 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:52.465 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:52.467 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:04:52.536 -05 000000058 INF: FPGA: Recv ZDACW 15-12-21 22:04:52.537 -05 000000009 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:04:52.537 -05 000000033 INF: ====================================== 15-12-21 22:04:52.538 -05 000000009 INF: ====================================== 15-12-21 22:04:52.654 -05 000000036 INF: LFT found best fwhm score 2.468312 in 152 ms 15-12-21 22:04:52.654 -05 000000036 INF: LFT found good score at index 5073 with fwhm value 2.468312. Next cycle, cycle 36 starting Z position for bottom surface is at -0.101 mm FC:B, C:35,L:1,B 15-12-21 22:04:52.655 -05 000000036 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:52.655 -05 000000036 INF: ====================================== 15-12-21 22:04:52.668 -05 000000028 INF: LFT found best fwhm score 2.550768 in 165 ms 15-12-21 22:04:52.668 -05 000000028 INF: LFT found good score at index 4561 with fwhm value 2.550768. Next cycle, cycle 36 starting Z position for bottom surface is at -0.101 mm FC:B, C:35,L:1,B 15-12-21 22:04:52.668 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:52.669 -05 000000078 INF: LFT found best fwhm score 2.241894 in 162 ms 15-12-21 22:04:52.669 -05 000000078 INF: LFT found good score at index 3773 with fwhm value 2.241894. Next cycle, cycle 36 starting Z position for bottom surface is at -0.101 mm FC:B, C:35,L:1,B 15-12-21 22:04:52.669 -05 000000028 INF: ====================================== 15-12-21 22:04:52.669 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:52.670 -05 000000078 INF: ====================================== 15-12-21 22:04:52.677 -05 000000022 INF: LFT found best fwhm score 2.506283 in 175 ms 15-12-21 22:04:52.677 -05 000000022 INF: LFT found good score at index 5637 with fwhm value 2.506283. Next cycle, cycle 36 starting Z position for bottom surface is at -0.101 mm FC:B, C:35,L:1,B 15-12-21 22:04:52.678 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:04:52.678 -05 000000022 INF: ====================================== 15-12-21 22:04:52.683 -05 000000037 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:04:52.685 -05 000000037 INF: LFT weighted average best Z for bottom surface is at -0.101mm FC:B, C:35,L:1,B 15-12-21 22:04:52.685 -05 000000037 INF: ====================================== 15-12-21 22:04:52.686 -05 000000063 INF: ====================================== 15-12-21 22:04:52.688 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.690 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:04:52.690 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.690 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:04:52.691 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.691 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:04:52.691 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.691 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:04:52.691 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.692 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:04:52.692 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:04:52.694 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 9 of 25 seconds left, Waiting for image analysis=================== 15-12-21 22:04:52.694 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 9 of 25 seconds left=================== 15-12-21 22:04:52.694 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:04:52.694 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:04:52.694 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:04:52.695 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:04:52.695 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:04:52.695 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:04:52.695 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:04:52.697 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:04:52.721 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.721 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:04:52.721 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:52.722 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -121.2 um, section = A_1 15-12-21 22:04:52.724 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:52.725 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:52.726 -05 000000028 INF: ===================MoveEmissionFilters=================== 15-12-21 22:04:52.726 -05 000000078 INF: ===================Move X,Y=================== 15-12-21 22:04:52.726 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:52.727 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:04:52.727 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:04:52.727 -05 000000025 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:04:52.727 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:04:52.728 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:04:52.728 -05 000000065 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:04:52.735 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:52.735 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:04:52.736 -05 000000065 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:04:52.736 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:04:52.737 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:04:52.737 -05 000000078 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:04:52.737 -05 000000033 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:04:52.737 -05 000000061 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:04:52.737 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:04:52.737 -05 000000089 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:04:52.738 -05 000000087 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:04:52.738 -05 000000061 INF: ====================================== 15-12-21 22:04:52.738 -05 000000087 INF: ====================================== 15-12-21 22:04:52.738 -05 000000063 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:04:52.738 -05 000000055 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:04:52.738 -05 000000092 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:04:52.739 -05 000000055 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:04:52.739 -05 000000089 INF: ====================================== 15-12-21 22:04:52.739 -05 000000054 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:04:52.739 -05 000000058 INF: ===================Move Y Motor without settling=================== 15-12-21 22:04:52.739 -05 000000055 INF: ====================================== 15-12-21 22:04:52.739 -05 000000081 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:52.739 -05 000000063 INF: ====================================== 15-12-21 22:04:52.739 -05 000000074 INF: ===================Move X Motor without settling=================== 15-12-21 22:04:52.740 -05 000000033 INF: ====================================== 15-12-21 22:04:52.740 -05 000000074 INF: X Motor: Xmit PR VM\n 15-12-21 22:04:52.740 -05 000000024 INF: ===================Camera Arm TDI=================== 15-12-21 22:04:52.740 -05 000000058 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:04:52.740 -05 000000058 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:04:52.740 -05 000000081 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:52.748 -05 000000092 INF: ====================================== 15-12-21 22:04:52.748 -05 000000058 INF: Y Motor: Xmit 1G\n 15-12-21 22:04:52.748 -05 000000054 INF: ====================================== 15-12-21 22:04:52.749 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:04:52.750 -05 000000037 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:04:52.750 -05 000000081 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:04:52.750 -05 000000065 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:04:52.750 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:04:52.750 -05 000000081 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:04:52.751 -05 000000081 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:04:52.751 -05 000000022 INF: ====================================== 15-12-21 22:04:52.751 -05 000000065 INF: ====================================== 15-12-21 22:04:52.752 -05 000000037 INF: ====================================== 15-12-21 22:04:52.752 -05 000000029 INF: ====================================== 15-12-21 22:04:52.753 -05 000000028 INF: ====================================== 15-12-21 22:04:52.850 -05 000000089 INF: FPGA: Recv ZSEL 15-12-21 22:04:52.851 -05 000000058 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:04:52.851 -05 000000081 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:04:52.852 -05 000000081 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:52.852 -05 000000058 INF: Y Motor: Recv 1G\r\n 15-12-21 22:04:52.853 -05 000000058 INF: Y Motor: Xmit 1D\n 15-12-21 22:04:52.854 -05 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:04:52.854 -05 000000074 INF: X Motor: Xmit PR VI\n 15-12-21 22:04:52.856 -05 000000081 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:04:52.856 -05 000000081 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:04:52.856 -05 000000081 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:04:52.879 -05 000000020 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104=================== 15-12-21 22:04:52.879 -05 000000031 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104=================== 15-12-21 22:04:52.879 -05 000000072 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105=================== 15-12-21 22:04:52.879 -05 000000088 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105=================== 15-12-21 22:04:52.879 -05 000000027 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106=================== 15-12-21 22:04:52.879 -05 000000051 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2107=================== 15-12-21 22:04:52.880 -05 000000044 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104=================== 15-12-21 22:04:52.887 -05 000000040 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2107, Registering and Extracting C035 L001 T2108=================== 15-12-21 22:04:52.911 -05 000000028 INF: FPGA: Recv ZSTEP 15-12-21 22:04:52.912 -05 000000058 INF: Y Motor: Recv 1D\r\n 15-12-21 22:04:52.912 -05 000000081 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:52.913 -05 000000074 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:04:52.913 -05 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:04:52.913 -05 000000074 INF: X Motor: Moving to 76.7340 mm @15.000 mm/sec, started at 75.9629 mm 15-12-21 22:04:52.913 -05 000000058 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:04:52.913 -05 000000074 INF: X Motor: Xmit MA 7264\n 15-12-21 22:04:52.914 -05 000000058 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:04:52.916 -05 000000081 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:04:52.917 -05 000000081 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:52.920 -05 000000081 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:04:52.924 -05 000000081 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:04:52.924 -05 000000081 INF: Z Motor: Arming to move to -0.0812 mm 15-12-21 22:04:52.924 -05 000000081 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:04:52.971 -05 000000074 INF: X Motor: Recv MA 7264\r\n> 15-12-21 22:04:52.971 -05 000000074 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:04:53.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:53.029 -05 000000079 INF: FPGA: Recv ZYT 15-12-21 22:04:53.029 -05 000000081 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907645 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:04:53.029 -05 000000081 INF: FPGA: Xmit ZARM 21290\n 15-12-21 22:04:53.132 -05 000000063 INF: FPGA: Recv ZARM 15-12-21 22:04:53.133 -05 000000081 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 103.3667 ms 15-12-21 22:04:53.133 -05 000000081 INF: Z Motor: ArmAbsStepped took 208.7214 ms 15-12-21 22:04:53.134 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:53.134 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:53.134 -05 000000081 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:04:53.137 -05 000000081 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:53.229 -05 000000081 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:04:53.229 -05 000000081 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:53.315 -05 000000081 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:04:53.316 -05 000000081 INF: ===================TDI Scan Setup=================== 15-12-21 22:04:53.318 -05 000000081 INF: ====================================== 15-12-21 22:04:53.451 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:53.463 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:53.463 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 8 of 25 seconds left=================== 15-12-21 22:04:53.515 -05 000000074 INF: X Motor: Xmit PR ER\n 15-12-21 22:04:53.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:53.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:53.578 -05 000000074 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:04:53.578 -05 000000074 INF: X Motor: Moved to 76.7344 after 607 ms 15-12-21 22:04:53.579 -05 000000074 INF: ====================================== 15-12-21 22:04:53.714 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:53.782 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 22:04:53.782 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:53.885 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:53.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:53.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:54.134 -05 000000024 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:04:54.134 -05 000000024 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:04:54.134 -05 000000024 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:04:54.480 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:54.480 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 7 of 25 seconds left=================== 15-12-21 22:04:55.202 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:55.216 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:55.216 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:55.326 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:55.342 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:55.342 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:55.560 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:55.561 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 6 of 25 seconds left=================== 15-12-21 22:04:55.578 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:04:55.685 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.982C:A1\r\n 15-12-21 22:04:55.685 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:55.787 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:55.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:55.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:55.820 -05 000000024 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:04:55.820 -05 000000024 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:04:55.820 -05 000000024 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:04:55.822 -05 000000024 INF: ====================================== 15-12-21 22:04:55.853 -05 000000025 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:04:55.855 -05 000000025 INF: ====================================== 15-12-21 22:04:56.561 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:56.561 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 5 of 25 seconds left=================== 15-12-21 22:04:56.698 -05 000000058 INF: Y Motor: Moved to 70.6885 after 3784 ms 15-12-21 22:04:56.699 -05 000000058 INF: ====================================== 15-12-21 22:04:56.701 -05 000000078 INF: ===================Move X,Y=================== 15-12-21 22:04:56.703 -05 000000078 INF: ====================================== 15-12-21 22:04:56.715 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:04:56.717 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:56.717 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:04:56.758 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:04:56.759 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:04:56.822 -05 000000056 INF: FPGA: Recv ZFREQCL 15-12-21 22:04:56.823 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:04:56.823 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:56.823 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:04:56.882 -05 000000065 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:04:56.882 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:04:56.883 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:56.884 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:56.892 -05 000000058 INF: ===================TDI FPGA Arm=================== 15-12-21 22:04:56.892 -05 000000028 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:04:56.892 -05 000000028 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:04:56.893 -05 000000058 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:56.900 -05 000000058 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:04:56.901 -05 000000058 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:04:56.947 -05 000000078 INF: FPGA: Recv TDIYPOS 15-12-21 22:04:56.948 -05 000000028 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:04:56.948 -05 000000058 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:56.949 -05 000000028 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:04:56.949 -05 000000028 INF: ====================================== 15-12-21 22:04:56.961 -05 000000058 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:04:56.961 -05 000000058 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:04:57.009 -05 000000036 INF: FPGA: Recv TDIYARM3 15-12-21 22:04:57.011 -05 000000058 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:04:57.013 -05 000000058 INF: ===================TDI FPGA Arm=================== 15-12-21 22:04:57.021 -05 000000058 INF: ====================================== 15-12-21 22:04:57.023 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:04:57.024 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:04:57.024 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:57.029 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:57.033 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:57.035 -05 000000092 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:04:57.035 -05 000000054 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:04:57.035 -05 000000092 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:04:57.035 -05 000000092 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:04:57.035 -05 000000092 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:04:57.038 -05 000000054 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:04:57.038 -05 000000092 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:04:57.039 -05 000000054 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:04:57.039 -05 000000054 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:04:57.053 -05 000000054 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:04:57.135 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:57.197 -05 000000034 INF: FPGA: Recv EX1MV 15-12-21 22:04:57.197 -05 000000054 INF: Excitation Filter 1: Moved -36 steps in 158.565 ms 15-12-21 22:04:57.197 -05 000000054 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 158.8052 ms 15-12-21 22:04:57.197 -05 000000054 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 158.9616 ms 15-12-21 22:04:57.198 -05 000000054 INF: ====================================== 15-12-21 22:04:57.199 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:57.199 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:57.378 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:57.401 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:57.401 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:57.556 -05 000000036 INF: FPGA: Recv EX2MV 15-12-21 22:04:57.556 -05 000000092 INF: Excitation Filter 2: Moved -107 steps in 521.0845 ms 15-12-21 22:04:57.556 -05 000000092 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 521.209 ms 15-12-21 22:04:57.556 -05 000000092 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 521.4372 ms 15-12-21 22:04:57.558 -05 000000092 INF: ====================================== 15-12-21 22:04:57.561 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:57.562 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:57.562 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 4 of 25 seconds left=================== 15-12-21 22:04:57.564 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:04:57.566 -05 000000082 INF: ===================Camera TDI=================== 15-12-21 22:04:57.566 -05 000000048 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:04:57.567 -05 000000065 INF: ===================FPGA Z Wait=================== 15-12-21 22:04:57.567 -05 000000065 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:04:57.568 -05 000000064 INF: ===================Move Y Motor without settling=================== 15-12-21 22:04:57.568 -05 000000064 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:04:57.568 -05 000000082 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:04:57.568 -05 000000048 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:04:57.568 -05 000000064 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:04:57.582 -05 000000064 INF: Y Motor: Xmit 1G\n 15-12-21 22:04:57.582 -05 000000048 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:04:57.585 -05 000000045 INF: ===================Camera TDI=================== 15-12-21 22:04:57.586 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:04:57.623 -05 000000064 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:04:57.624 -05 000000064 INF: Y Motor: Recv 1G\r\n 15-12-21 22:04:57.640 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:04:57.642 -05 000000064 INF: Y Motor: Xmit 1D\n 15-12-21 22:04:57.681 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.505C:A1\r\n 15-12-21 22:04:57.681 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:57.717 -05 000000064 INF: Y Motor: Recv 1D\r\n 15-12-21 22:04:57.718 -05 000000064 INF: Y Motor: Recv *407662\r\n 15-12-21 22:04:57.719 -05 000000064 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:04:57.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:57.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:57.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:57.865 -05 000000036 INF: FPGA: Recv ZWAIT 15-12-21 22:04:57.866 -05 000000065 INF: ====================================== 15-12-21 22:04:57.962 -05 000000088 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2107=================== 15-12-21 22:04:58.069 -05 000000077 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2107, Registering and Extracting C035 L001 T2109=================== 15-12-21 22:04:58.070 -05 000000045 INF: ===================Frame #4=================== 15-12-21 22:04:58.071 -05 000000028 INF: ===================Frame #4=================== 15-12-21 22:04:58.079 -05 000000031 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2107=================== 15-12-21 22:04:58.170 -05 000000038 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2107, Registering and Extracting C035 L001 T2110=================== 15-12-21 22:04:58.186 -05 000000072 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2107=================== 15-12-21 22:04:58.223 -05 000000027 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106=================== 15-12-21 22:04:58.270 -05 000000066 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111, Registering and Extracting C035 L001 T2112=================== 15-12-21 22:04:58.270 -05 000000011 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111, Registering and Extracting C035 L001 T2112=================== 15-12-21 22:04:58.294 -05 000000028 INF: ===================Frame #21=================== 15-12-21 22:04:58.295 -05 000000045 INF: ===================Frame #21=================== 15-12-21 22:04:58.446 -05 000000028 INF: ===================Frame #33=================== 15-12-21 22:04:58.446 -05 000000045 INF: ===================Frame #33=================== 15-12-21 22:04:58.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:58.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 3 of 25 seconds left=================== 15-12-21 22:04:58.596 -05 000000045 INF: ===================Frame #45=================== 15-12-21 22:04:58.596 -05 000000028 INF: ===================Frame #45=================== 15-12-21 22:04:58.598 -05 000000020 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111=================== 15-12-21 22:04:58.670 -05 000000060 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111, Registering and Extracting C035 L001 T2113=================== 15-12-21 22:04:58.698 -05 000000044 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111=================== 15-12-21 22:04:58.746 -05 000000028 INF: ===================Frame #57=================== 15-12-21 22:04:58.746 -05 000000045 INF: ===================Frame #57=================== 15-12-21 22:04:58.769 -05 000000075 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111, Registering and Extracting C035 L001 T2114=================== 15-12-21 22:04:58.827 -05 000000051 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111=================== 15-12-21 22:04:58.869 -05 000000076 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111, Registering and Extracting C035 L001 T2115=================== 15-12-21 22:04:58.885 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:04:58.916 -05 000000028 INF: ===================Frame #71=================== 15-12-21 22:04:58.916 -05 000000045 INF: ===================Frame #71=================== 15-12-21 22:04:58.949 -05 000000040 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111=================== 15-12-21 22:04:58.970 -05 000000090 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111, Registering and Extracting C035 L001 T2116=================== 15-12-21 22:04:59.073 -05 000000028 INF: ===================Frame #83=================== 15-12-21 22:04:59.073 -05 000000045 INF: ===================Frame #83=================== 15-12-21 22:04:59.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:04:59.224 -05 000000028 INF: ===================Frame #95=================== 15-12-21 22:04:59.224 -05 000000045 INF: ===================Frame #95=================== 15-12-21 22:04:59.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:04:59.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:59.375 -05 000000028 INF: ===================Frame #107=================== 15-12-21 22:04:59.375 -05 000000045 INF: ===================Frame #107=================== 15-12-21 22:04:59.401 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:04:59.460 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:59.460 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:59.534 -05 000000045 INF: ===================Frame #119=================== 15-12-21 22:04:59.534 -05 000000028 INF: ===================Frame #119=================== 15-12-21 22:04:59.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:04:59.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 2 of 25 seconds left=================== 15-12-21 22:04:59.586 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:04:59.663 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:04:59.663 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:04:59.686 -05 000000028 INF: ===================Frame #131=================== 15-12-21 22:04:59.686 -05 000000045 INF: ===================Frame #131=================== 15-12-21 22:04:59.836 -05 000000045 INF: ===================Frame #143=================== 15-12-21 22:04:59.837 -05 000000028 INF: ===================Frame #143=================== 15-12-21 22:04:59.988 -05 000000028 INF: ===================Frame #155=================== 15-12-21 22:04:59.988 -05 000000045 INF: ===================Frame #155=================== 15-12-21 22:05:00.138 -05 000000028 INF: ===================Frame #167=================== 15-12-21 22:05:00.139 -05 000000045 INF: ===================Frame #167=================== 15-12-21 22:05:00.289 -05 000000045 INF: ===================Frame #179=================== 15-12-21 22:05:00.290 -05 000000028 INF: ===================Frame #179=================== 15-12-21 22:05:00.444 -05 000000028 INF: ===================Frame #191=================== 15-12-21 22:05:00.460 -05 000000045 INF: ===================Frame #193=================== 15-12-21 22:05:00.566 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:00.566 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 1 of 25 seconds left=================== 15-12-21 22:05:00.594 -05 000000028 INF: ===================Frame #203=================== 15-12-21 22:05:00.610 -05 000000045 INF: ===================Frame #205=================== 15-12-21 22:05:00.745 -05 000000028 INF: ===================Frame #215=================== 15-12-21 22:05:00.760 -05 000000045 INF: ===================Frame #216=================== 15-12-21 22:05:00.904 -05 000000028 INF: ===================Frame #228=================== 15-12-21 22:05:00.945 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:00.956 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.989C:A1\r\n 15-12-21 22:05:00.956 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:01.064 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:01.080 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:01.080 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:01.188 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:01.207 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:01.207 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:01.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:01.392 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:01.392 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:01.393 -05 000000057 INF: WaitCommand(25000) end 15-12-21 22:05:01.393 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:01.393 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:01.393 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:01.394 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:05:01.395 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:01.516 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:01.517 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 22:05:01.517 -05 000000057 INF: Valve A2: Go to position 5 15-12-21 22:05:01.517 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:05:01.578 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 1\r 15-12-21 22:05:01.578 -05 000000057 INF: Valve A2: 42.540 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:05:01.578 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 1 to 5 15-12-21 22:05:01.578 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW5\r 15-12-21 22:05:01.578 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:05:01.578 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:05:02.042 -05 000000045 INF: ===================Frame #318=================== 15-12-21 22:05:02.149 -05 000000028 INF: ===================Frame #326=================== 15-12-21 22:05:02.515 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 22:05:02.516 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:02.516 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:05:02.525 -05 000000045 INF: ===================Frame #356=================== 15-12-21 22:05:02.621 -05 000000028 INF: ===================Frame #363=================== 15-12-21 22:05:02.695 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:02.746 -05 000000077 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106, Registering and Extracting C035 L001 T2111=================== 15-12-21 22:05:02.768 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:05:02.768 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:02.774 -05 000000028 INF: ===================Frame #375=================== 15-12-21 22:05:02.777 -05 000000045 INF: ===================Frame #376=================== 15-12-21 22:05:02.821 -05 000000038 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105, Registering and Extracting C035 L001 T2106=================== 15-12-21 22:05:02.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:02.892 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:02.892 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:02.919 -05 000000066 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104, Registering and Extracting C035 L001 T2105=================== 15-12-21 22:05:02.925 -05 000000028 INF: ===================Frame #388=================== 15-12-21 22:05:02.988 -05 000000045 INF: ===================Frame #392=================== 15-12-21 22:05:02.997 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:03.016 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.068C:A1\r\n 15-12-21 22:05:03.016 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:03.117 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:05:03.140 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:05:03.140 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:03.175 -05 000000045 INF: ===================Frame #407=================== 15-12-21 22:05:03.194 -05 000000028 INF: ===================Frame #409=================== 15-12-21 22:05:03.235 -05 000000011 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103, Registering and Extracting C035 L001 T2104=================== 15-12-21 22:05:03.250 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:03.294 -05 000000075 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102, Registering and Extracting C035 L001 T2103=================== 15-12-21 22:05:03.325 -05 000000045 INF: ===================Frame #419=================== 15-12-21 22:05:03.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:03.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:03.345 -05 000000028 INF: ===================Frame #421=================== 15-12-21 22:05:03.371 -05 000000060 INF: ===================Registering and Extracting C035 L001 T2101, Registering and Extracting C035 L001 T2102=================== 15-12-21 22:05:03.413 -05 000000090 INF: ===================Registering and Extracting C035 L001 T2101=================== 15-12-21 22:05:03.434 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:03.454 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:05:03.454 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:03.475 -05 000000045 INF: ===================Frame #431=================== 15-12-21 22:05:03.495 -05 000000028 INF: ===================Frame #433=================== 15-12-21 22:05:03.501 -05 000000076 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:05:03.531 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:03.540 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:05:03.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:03.557 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:03.557 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:05:03.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:03.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:03.617 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:03.625 -05 000000045 INF: ===================Frame #443=================== 15-12-21 22:05:03.639 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:03.645 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:05:03.646 -05 000000028 INF: ===================Frame #444=================== 15-12-21 22:05:03.701 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:03.710 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:05:03.747 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:03.753 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:05:03.776 -05 000000045 INF: ===================Frame #455=================== 15-12-21 22:05:03.801 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:05:03.854 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:03.862 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:05:03.886 -05 000000028 INF: ===================Frame #463=================== 15-12-21 22:05:03.888 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 22:05:03.888 -05 000000057 INF: Current Position of Pump is: 21120 15-12-21 22:05:03.888 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:05:03.927 -05 000000045 INF: ===================Frame #467=================== 15-12-21 22:05:03.959 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:03.988 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P4608R\r 15-12-21 22:05:04.037 -05 000000028 INF: ===================Frame #475=================== 15-12-21 22:05:04.056 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:04.077 -05 000000045 INF: ===================Frame #479=================== 15-12-21 22:05:04.078 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:05:04.078 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:04.079 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:04.179 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:04.189 -05 000000028 INF: ===================Frame #487=================== 15-12-21 22:05:04.228 -05 000000045 INF: ===================Frame #491=================== 15-12-21 22:05:04.265 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:04.339 -05 000000028 INF: ===================Frame #499=================== 15-12-21 22:05:04.379 -05 000000045 INF: ===================Frame #502=================== 15-12-21 22:05:04.491 -05 000000028 INF: ===================Frame #511=================== 15-12-21 22:05:04.515 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:04.576 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:04.641 -05 000000028 INF: ===================Frame #523=================== 15-12-21 22:05:04.792 -05 000000028 INF: ===================Frame #535=================== 15-12-21 22:05:04.797 -05 000000045 INF: ===================Frame #535=================== 15-12-21 22:05:04.807 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:04.826 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:04.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:04.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:04.832 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:05:04.894 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:04.933 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:04.943 -05 000000028 INF: ===================Frame #547=================== 15-12-21 22:05:04.947 -05 000000045 INF: ===================Frame #547=================== 15-12-21 22:05:04.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:04.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:05.055 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:05.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:05.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:05.094 -05 000000028 INF: ===================Frame #559=================== 15-12-21 22:05:05.097 -05 000000045 INF: ===================Frame #559=================== 15-12-21 22:05:05.144 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:05.200 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:05.245 -05 000000028 INF: ===================Frame #571=================== 15-12-21 22:05:05.247 -05 000000045 INF: ===================Frame #571=================== 15-12-21 22:05:05.395 -05 000000028 INF: ===================Frame #583=================== 15-12-21 22:05:05.397 -05 000000045 INF: ===================Frame #583=================== 15-12-21 22:05:05.450 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:05.510 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:05.545 -05 000000028 INF: ===================Frame #595=================== 15-12-21 22:05:05.547 -05 000000045 INF: ===================Frame #595=================== 15-12-21 22:05:05.695 -05 000000028 INF: ===================Frame #607=================== 15-12-21 22:05:05.697 -05 000000045 INF: ===================Frame #607=================== 15-12-21 22:05:05.760 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:05.824 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:05.845 -05 000000028 INF: ===================Frame #618=================== 15-12-21 22:05:05.847 -05 000000045 INF: ===================Frame #619=================== 15-12-21 22:05:06.000 -05 000000045 INF: ===================Frame #630=================== 15-12-21 22:05:06.066 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:06.074 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:06.134 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:06.134 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:05:06.135 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.010C:A1\r\n 15-12-21 22:05:06.135 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:06.234 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:05:06.265 -05 000000028 INF: ===================Frame #652=================== 15-12-21 22:05:06.323 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 22:05:06.323 -05 000000057 INF: Current Position of Pump is: 25728 15-12-21 22:05:06.323 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:05:06.352 -05 000000045 INF: ===================Frame #658=================== 15-12-21 22:05:06.371 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:06.423 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:05:06.448 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:06.448 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:06.454 -05 000000028 INF: ===================Frame #667=================== 15-12-21 22:05:06.509 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:06.535 -05 000000045 INF: ===================Frame #673=================== 15-12-21 22:05:06.555 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:06.572 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:06.572 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:06.604 -05 000000028 INF: ===================Frame #678=================== 15-12-21 22:05:06.609 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:06.677 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:06.685 -05 000000045 INF: ===================Frame #685=================== 15-12-21 22:05:06.696 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:06.697 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:06.697 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:06.783 -05 000000028 INF: ===================Frame #693=================== 15-12-21 22:05:06.835 -05 000000045 INF: ===================Frame #697=================== 15-12-21 22:05:06.933 -05 000000028 INF: ===================Frame #704=================== 15-12-21 22:05:06.946 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:06.985 -05 000000045 INF: ===================Frame #709=================== 15-12-21 22:05:07.009 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:07.009 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:07.010 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:05:07.010 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:07.072 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:05:07.072 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:07.122 -05 000000028 INF: ===================Frame #719=================== 15-12-21 22:05:07.136 -05 000000045 INF: ===================Frame #720=================== 15-12-21 22:05:07.173 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:05:07.196 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:05:07.196 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:07.272 -05 000000028 INF: ===================Frame #731=================== 15-12-21 22:05:07.299 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:07.321 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:05:07.321 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:07.367 -05 000000045 INF: ===================Frame #739=================== 15-12-21 22:05:07.421 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:07.422 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:07.422 -05 000000028 INF: ===================Frame #743=================== 15-12-21 22:05:07.423 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:07.423 -05 000000057 INF: WaitCommand(5000) start 15-12-21 22:05:07.423 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 22:05:07.520 -05 000000045 INF: ===================Frame #751=================== 15-12-21 22:05:07.572 -05 000000028 INF: ===================Frame #755=================== 15-12-21 22:05:07.670 -05 000000045 INF: ===================Frame #763=================== 15-12-21 22:05:07.723 -05 000000028 INF: ===================Frame #767=================== 15-12-21 22:05:07.976 -05 000000028 INF: ===================Frame #780=================== 15-12-21 22:05:07.976 -05 000000045 INF: ===================Frame #775=================== 15-12-21 22:05:08.129 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:08.150 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:08.150 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:08.166 -05 000000045 INF: ===================Frame #802=================== 15-12-21 22:05:08.251 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:08.279 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.819C:A1\r\n 15-12-21 22:05:08.279 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:08.323 -05 000000028 INF: ===================Frame #814=================== 15-12-21 22:05:08.378 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:08.397 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:08.397 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:08.423 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:08.424 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:05:08.431 -05 000000045 INF: ===================Frame #823=================== 15-12-21 22:05:08.497 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:08.514 -05 000000028 INF: ===================Frame #829=================== 15-12-21 22:05:08.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:08.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:08.583 -05 000000045 INF: ===================Frame #835=================== 15-12-21 22:05:08.665 -05 000000028 INF: ===================Frame #841=================== 15-12-21 22:05:08.733 -05 000000045 INF: ===================Frame #847=================== 15-12-21 22:05:08.815 -05 000000028 INF: ===================Frame #853=================== 15-12-21 22:05:08.883 -05 000000045 INF: ===================Frame #859=================== 15-12-21 22:05:08.966 -05 000000028 INF: ===================Frame #865=================== 15-12-21 22:05:09.033 -05 000000045 INF: ===================Frame #870=================== 15-12-21 22:05:09.117 -05 000000028 INF: ===================Frame #877=================== 15-12-21 22:05:09.182 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:09.210 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:05:09.210 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:09.269 -05 000000028 INF: ===================Frame #889=================== 15-12-21 22:05:09.270 -05 000000045 INF: ===================Frame #889=================== 15-12-21 22:05:09.420 -05 000000028 INF: ===================Frame #901=================== 15-12-21 22:05:09.420 -05 000000045 INF: ===================Frame #901=================== 15-12-21 22:05:09.424 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:09.424 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 22:05:09.570 -05 000000028 INF: ===================Frame #913=================== 15-12-21 22:05:09.570 -05 000000045 INF: ===================Frame #913=================== 15-12-21 22:05:09.721 -05 000000028 INF: ===================Frame #925=================== 15-12-21 22:05:09.722 -05 000000045 INF: ===================Frame #925=================== 15-12-21 22:05:09.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:09.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:09.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:09.872 -05 000000028 INF: ===================Frame #937=================== 15-12-21 22:05:09.872 -05 000000045 INF: ===================Frame #937=================== 15-12-21 22:05:09.877 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:09.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:09.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:10.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:10.022 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:10.022 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:10.023 -05 000000028 INF: ===================Frame #949=================== 15-12-21 22:05:10.023 -05 000000045 INF: ===================Frame #949=================== 15-12-21 22:05:10.174 -05 000000028 INF: ===================Frame #961=================== 15-12-21 22:05:10.174 -05 000000045 INF: ===================Frame #961=================== 15-12-21 22:05:10.325 -05 000000028 INF: ===================Frame #973=================== 15-12-21 22:05:10.325 -05 000000045 INF: ===================Frame #973=================== 15-12-21 22:05:10.424 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:10.424 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 22:05:10.475 -05 000000028 INF: ===================Frame #984=================== 15-12-21 22:05:10.475 -05 000000045 INF: ===================Frame #984=================== 15-12-21 22:05:10.861 -05 000000045 INF: ===================Frame #1015=================== 15-12-21 22:05:10.916 -05 000000028 INF: ===================Frame #1019=================== 15-12-21 22:05:11.011 -05 000000045 INF: ===================Frame #1027=================== 15-12-21 22:05:11.067 -05 000000028 INF: ===================Frame #1031=================== 15-12-21 22:05:11.162 -05 000000045 INF: ===================Frame #1039=================== 15-12-21 22:05:11.217 -05 000000028 INF: ===================Frame #1043=================== 15-12-21 22:05:11.247 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:11.268 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:11.268 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:11.312 -05 000000045 INF: ===================Frame #1051=================== 15-12-21 22:05:11.367 -05 000000028 INF: ===================Frame #1055=================== 15-12-21 22:05:11.377 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:11.424 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:11.425 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 22:05:11.456 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.999C:A1\r\n 15-12-21 22:05:11.456 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:11.463 -05 000000045 INF: ===================Frame #1063=================== 15-12-21 22:05:11.518 -05 000000028 INF: ===================Frame #1067=================== 15-12-21 22:05:11.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:11.582 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:11.582 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:11.615 -05 000000045 INF: ===================Frame #1074=================== 15-12-21 22:05:11.669 -05 000000028 INF: ===================Frame #1079=================== 15-12-21 22:05:11.689 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:11.705 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:11.705 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:11.820 -05 000000028 INF: ===================Frame #1091=================== 15-12-21 22:05:11.864 -05 000000045 INF: ===================Frame #1094=================== 15-12-21 22:05:11.971 -05 000000028 INF: ===================Frame #1103=================== 15-12-21 22:05:12.035 -05 000000045 INF: ===================Frame #1108=================== 15-12-21 22:05:12.122 -05 000000028 INF: ===================Frame #1115=================== 15-12-21 22:05:12.198 -05 000000045 INF: ===================Frame #1121=================== 15-12-21 22:05:12.273 -05 000000028 INF: ===================Frame #1127=================== 15-12-21 22:05:12.349 -05 000000045 INF: ===================Frame #1132=================== 15-12-21 22:05:12.423 -05 000000028 INF: ===================Frame #1138=================== 15-12-21 22:05:12.426 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:12.426 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:12.426 -05 000000057 INF: WaitCommand(5000) end 15-12-21 22:05:12.426 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:12.430 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:12.430 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:12.438 -05 000000074 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:05:12.438 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:12.439 -05 000000087 INF: ===================WaitCommand=================== 15-12-21 22:05:12.439 -05 000000087 INF: WaitCommand(15000) start 15-12-21 22:05:12.446 -05 000000087 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:05:12.501 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:12.526 -05 000000045 INF: ===================Frame #1146=================== 15-12-21 22:05:12.601 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:12.627 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:12.696 -05 000000045 INF: ===================Frame #1160=================== 15-12-21 22:05:12.727 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:05:12.758 -05 000000028 INF: ===================Frame #1165=================== 15-12-21 22:05:12.812 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 22:05:12.812 -05 000000074 INF: Current Position of Pump is: 25728 15-12-21 22:05:12.812 -05 000000074 INF: Dispense Steps 48000 is greater than steps to home syringe 25728, reducing number of steps to 25728 15-12-21 22:05:12.812 -05 000000074 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:05:12.860 -05 000000045 INF: ===================Frame #1173=================== 15-12-21 22:05:12.909 -05 000000028 INF: ===================Frame #1177=================== 15-12-21 22:05:12.912 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD25728R\r 15-12-21 22:05:12.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:12.954 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:12.954 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:13.000 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:13.010 -05 000000045 INF: ===================Frame #1185=================== 15-12-21 22:05:13.059 -05 000000028 INF: ===================Frame #1189=================== 15-12-21 22:05:13.062 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:13.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:13.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:13.100 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:13.160 -05 000000045 INF: ===================Frame #1197=================== 15-12-21 22:05:13.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:13.188 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:13.209 -05 000000028 INF: ===================Frame #1200=================== 15-12-21 22:05:13.265 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:13.265 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:13.315 -05 000000045 INF: ===================Frame #1208=================== 15-12-21 22:05:13.379 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:13.422 -05 000000028 INF: ===================Frame #1217=================== 15-12-21 22:05:13.438 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:13.447 -05 000000087 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:05:13.452 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.765C:A1\r\n 15-12-21 22:05:13.452 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:13.498 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:13.511 -05 000000045 INF: ===================Frame #1224=================== 15-12-21 22:05:13.572 -05 000000028 INF: ===================Frame #1229=================== 15-12-21 22:05:13.676 -05 000000045 INF: ===================Frame #1237=================== 15-12-21 22:05:13.722 -05 000000028 INF: ===================Frame #1241=================== 15-12-21 22:05:13.748 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:13.810 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:13.826 -05 000000045 INF: ===================Frame #1249=================== 15-12-21 22:05:13.872 -05 000000028 INF: ===================Frame #1250=================== 15-12-21 22:05:13.873 -05 000000086 INF: FPGA: Recv TDIYWAIT 15-12-21 22:05:13.874 -05 000000048 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:05:13.876 -05 000000048 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:05:13.878 -05 000000058 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:05:13.878 -05 000000033 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:05:13.878 -05 000000058 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:05:13.878 -05 000000058 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:05:13.878 -05 000000058 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:05:13.881 -05 000000058 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:05:13.881 -05 000000033 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:05:13.881 -05 000000033 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:05:13.881 -05 000000033 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:05:13.885 -05 000000033 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:05:13.926 -05 000000028 INF: Camera complete - got 1250 frames. 15-12-21 22:05:13.928 -05 000000028 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:05:14.045 -05 000000045 INF: ===================Frame #1250=================== 15-12-21 22:05:14.045 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:05:14.059 -05 000000029 INF: FPGA: Recv EX1MV 15-12-21 22:05:14.059 -05 000000058 INF: Excitation Filter 1: Moved 36 steps in 181.0782 ms 15-12-21 22:05:14.059 -05 000000058 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 181.1816 ms 15-12-21 22:05:14.059 -05 000000058 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 181.247 ms 15-12-21 22:05:14.060 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:14.060 -05 000000058 INF: ====================================== 15-12-21 22:05:14.083 -05 000000028 INF: ====================================== 15-12-21 22:05:14.115 -05 000000045 INF: Camera complete - got 1250 frames. 15-12-21 22:05:14.117 -05 000000045 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:05:14.122 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:14.272 -05 000000055 INF: FPGA: Recv EX2MV 15-12-21 22:05:14.280 -05 000000033 INF: Excitation Filter 2: Moved 107 steps in 398.1974 ms 15-12-21 22:05:14.281 -05 000000033 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 400.2873 ms 15-12-21 22:05:14.281 -05 000000033 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 400.3571 ms 15-12-21 22:05:14.285 -05 000000033 INF: ====================================== 15-12-21 22:05:14.318 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:14.319 -05 000000048 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:05:14.322 -05 000000048 INF: ====================================== 15-12-21 22:05:14.329 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.013C:A1\r\n 15-12-21 22:05:14.329 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:14.372 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:14.375 -05 000000045 INF: ===================Camera TDI=================== 15-12-21 22:05:14.397 -05 000000045 INF: ====================================== 15-12-21 22:05:14.404 -05 000000082 INF: ===================Camera TDI=================== 15-12-21 22:05:14.408 -05 000000082 INF: ====================================== 15-12-21 22:05:14.486 -05 000000087 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:05:14.488 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:14.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:14.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:14.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:14.672 -05 000000064 INF: Y Motor: Moved to 9.0765 after 16951 ms 15-12-21 22:05:14.672 -05 000000064 INF: ====================================== 15-12-21 22:05:14.674 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:14.676 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:14.679 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:14.680 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:05:14.731 -05 000000065 INF: FPGA: Recv TDICLINES 10484 15-12-21 22:05:14.731 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:05:14.738 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:14.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:14.793 -05 000000079 INF: FPGA: Recv TDIYERD 907651 15-12-21 22:05:14.793 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:05:14.795 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:14.795 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:14.796 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:14.854 -05 000000061 INF: FPGA: Recv ZADCR 25202 15-12-21 22:05:14.854 -05 000000062 INF: At scan end Y pos = 9.077 and Z pos = -0.096. Y moved -60.303 mm 15-12-21 22:05:14.854 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:05:14.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:14.919 -05 000000025 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:05:14.919 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:05:14.920 -05 000000062 INF: TDIScan finished after 22223.3876 ms 15-12-21 22:05:14.920 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:05:14.920 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:05:14.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:14.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:14.926 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:14.954 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.940 um 15-12-21 22:05:14.954 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:14.957 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:14.962 -05 000000054 INF: ===================Dither Clean Up Command=================== 15-12-21 22:05:14.963 -05 000000065 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:05:14.963 -05 000000058 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:05:14.963 -05 000000023 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:05:14.963 -05 000000065 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:05:14.963 -05 000000065 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:05:14.963 -05 000000058 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:05:14.967 -05 000000061 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:05:14.970 -05 000000036 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:05:14.971 -05 000000036 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:05:14.971 -05 000000061 INF: ===================LFT:Extracting coords=================== 15-12-21 22:05:14.979 -05 000000024 INF: FPGA: Recv ZSTEP 15-12-21 22:05:14.979 -05 000000065 INF: ====================================== 15-12-21 22:05:15.004 -05 000000061 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:05:15.006 -05 000000061 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:05:15.009 -05 000000084 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:15.009 -05 000000089 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:15.009 -05 000000084 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:05:15.009 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:15.010 -05 000000089 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:05:15.010 -05 000000043 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:15.012 -05 000000092 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:05:15.012 -05 000000043 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:05:15.044 -05 000000063 INF: FPGA: Recv ZSEL 15-12-21 22:05:15.044 -05 000000036 INF: FPGA: Xmit ZDACW 31776\n 15-12-21 22:05:15.045 -05 000000058 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:05:15.046 -05 000000058 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:05:15.046 -05 000000023 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:05:15.046 -05 000000058 INF: ====================================== 15-12-21 22:05:15.047 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:15.106 -05 000000025 INF: FPGA: Recv ZDACW 15-12-21 22:05:15.107 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:15.111 -05 000000023 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:05:15.111 -05 000000036 INF: ====================================== 15-12-21 22:05:15.112 -05 000000023 INF: ====================================== 15-12-21 22:05:15.186 -05 000000084 INF: LFT found best fwhm score 2.472362 in 131 ms 15-12-21 22:05:15.186 -05 000000084 INF: LFT found good score at index 3865 with fwhm value 2.472362. Next cycle, cycle 36 starting Z position for bottom surface is at -0.102 mm FC:B, C:35,L:1,B 15-12-21 22:05:15.186 -05 000000084 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:15.186 -05 000000089 INF: LFT found best fwhm score 2.552551 in 130 ms 15-12-21 22:05:15.186 -05 000000089 INF: LFT found good score at index 8609 with fwhm value 2.552551. Next cycle, cycle 36 starting Z position for bottom surface is at -0.101 mm FC:B, C:35,L:1,B 15-12-21 22:05:15.186 -05 000000084 INF: ====================================== 15-12-21 22:05:15.186 -05 000000089 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:15.187 -05 000000089 INF: ====================================== 15-12-21 22:05:15.213 -05 000000043 INF: LFT found best fwhm score 2.508406 in 157 ms 15-12-21 22:05:15.213 -05 000000043 INF: LFT found good score at index 3589 with fwhm value 2.508406. Next cycle, cycle 36 starting Z position for bottom surface is at -0.102 mm FC:B, C:35,L:1,B 15-12-21 22:05:15.213 -05 000000092 INF: LFT found best fwhm score 2.250188 in 157 ms 15-12-21 22:05:15.213 -05 000000092 INF: LFT found good score at index 4505 with fwhm value 2.250188. Next cycle, cycle 36 starting Z position for bottom surface is at -0.102 mm FC:B, C:35,L:1,B 15-12-21 22:05:15.213 -05 000000043 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:15.213 -05 000000092 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:15.214 -05 000000043 INF: ====================================== 15-12-21 22:05:15.214 -05 000000092 INF: ====================================== 15-12-21 22:05:15.218 -05 000000061 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:05:15.220 -05 000000061 INF: LFT weighted average best Z for bottom surface is at -0.101mm FC:B, C:35,L:1,B 15-12-21 22:05:15.222 -05 000000061 INF: ====================================== 15-12-21 22:05:15.224 -05 000000054 INF: ====================================== 15-12-21 22:05:15.227 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:15.230 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:05:15.232 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:15.232 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:05:15.233 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:15.233 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:05:15.233 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:15.233 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:05:15.233 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:15.234 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:05:15.234 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:05:15.236 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Waiting for image analysis, Dispensing port PortC, Delay 13 of 15 seconds left=================== 15-12-21 22:05:15.236 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Dispensing port PortC, Delay 13 of 15 seconds left=================== 15-12-21 22:05:15.236 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:05:15.236 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:05:15.236 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:05:15.239 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:15.239 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:05:15.239 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:05:15.240 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:05:15.245 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:05:15.247 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface=================== 15-12-21 22:05:15.265 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:05:15.266 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:05:15.267 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:05:15.428 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:15.429 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:05:15.431 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:05:15.432 -05 000000062 INF: Compensator: Remaining OutOfPath 15-12-21 22:05:15.432 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:05:15.434 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:05:15.473 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:05:15.474 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:05:15.481 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:15.487 -05 000000087 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:05:15.491 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:15.491 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:05:15.491 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:15.491 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -121.2 um, section = B_1 15-12-21 22:05:15.494 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:05:15.495 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:05:15.499 -05 000000089 INF: ===================MoveEmissionFilters=================== 15-12-21 22:05:15.499 -05 000000029 INF: ===================Move X,Y=================== 15-12-21 22:05:15.500 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:05:15.501 -05 000000041 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:05:15.501 -05 000000029 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:05:15.503 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:05:15.503 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:05:15.503 -05 000000063 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:05:15.507 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:05:15.508 -05 000000092 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:05:15.508 -05 000000092 INF: Z Motor: Moving to -0.1197 mm, started at -0.1212 mm 15-12-21 22:05:15.508 -05 000000092 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:05:15.508 -05 000000041 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:05:15.508 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:05:15.509 -05 000000023 INF: ===================Move Y Motor without settling=================== 15-12-21 22:05:15.512 -05 000000058 INF: ===================Move X Motor without settling=================== 15-12-21 22:05:15.512 -05 000000058 INF: X Motor: Xmit PR VM\n 15-12-21 22:05:15.512 -05 000000063 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:05:15.516 -05 000000023 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:05:15.516 -05 000000023 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:05:15.517 -05 000000023 INF: Y Motor: Xmit 1G\n 15-12-21 22:05:15.517 -05 000000082 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:05:15.517 -05 000000037 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:05:15.517 -05 000000068 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:05:15.517 -05 000000082 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:05:15.517 -05 000000084 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:05:15.517 -05 000000048 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:05:15.521 -05 000000065 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:05:15.521 -05 000000037 INF: ====================================== 15-12-21 22:05:15.522 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:05:15.522 -05 000000065 INF: ====================================== 15-12-21 22:05:15.526 -05 000000068 INF: ====================================== 15-12-21 22:05:15.526 -05 000000084 INF: ====================================== 15-12-21 22:05:15.526 -05 000000082 INF: ====================================== 15-12-21 22:05:15.529 -05 000000045 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:05:15.529 -05 000000048 INF: ====================================== 15-12-21 22:05:15.532 -05 000000045 INF: ====================================== 15-12-21 22:05:15.532 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:05:15.532 -05 000000055 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:05:15.533 -05 000000055 INF: ====================================== 15-12-21 22:05:15.533 -05 000000063 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:05:15.535 -05 000000061 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:05:15.537 -05 000000079 INF: ====================================== 15-12-21 22:05:15.538 -05 000000041 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:05:15.538 -05 000000063 INF: ====================================== 15-12-21 22:05:15.539 -05 000000061 INF: ====================================== 15-12-21 22:05:15.539 -05 000000041 INF: ====================================== 15-12-21 22:05:15.542 -05 000000049 INF: FPGA: Recv ZTRG 15-12-21 22:05:15.542 -05 000000092 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:05:15.542 -05 000000089 INF: ====================================== 15-12-21 22:05:15.546 -05 000000023 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:05:15.548 -05 000000058 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:05:15.548 -05 000000058 INF: X Motor: Xmit PR VI\n 15-12-21 22:05:15.583 -05 000000090 INF: ===================Registering and Extracting C035 L001 T2201=================== 15-12-21 22:05:15.584 -05 000000076 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202=================== 15-12-21 22:05:15.584 -05 000000075 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203=================== 15-12-21 22:05:15.591 -05 000000060 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205=================== 15-12-21 22:05:15.591 -05 000000011 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205=================== 15-12-21 22:05:15.600 -05 000000066 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2207=================== 15-12-21 22:05:15.600 -05 000000038 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2207=================== 15-12-21 22:05:15.605 -05 000000036 INF: FPGA: Recv ZYT 15-12-21 22:05:15.605 -05 000000092 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:05:15.605 -05 000000092 INF: FPGA: Xmit ZMV 31368\n 15-12-21 22:05:15.605 -05 000000077 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2207, Registering and Extracting C035 L001 T2208=================== 15-12-21 22:05:15.612 -05 000000023 INF: Y Motor: Recv 1G\r\n 15-12-21 22:05:15.613 -05 000000058 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:05:15.613 -05 000000058 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:05:15.613 -05 000000023 INF: Y Motor: Xmit 1D\n 15-12-21 22:05:15.613 -05 000000058 INF: X Motor: Moving to 80.2570 mm @15.000 mm/sec, started at 76.7344 mm 15-12-21 22:05:15.613 -05 000000058 INF: X Motor: Xmit MA 8707\n 15-12-21 22:05:15.667 -05 000000043 INF: FPGA: Recv ZMV 15-12-21 22:05:15.668 -05 000000092 INF: Z Motor: MoveAndTrigger 'ZMV' command took 62.4482 ms 15-12-21 22:05:15.668 -05 000000092 INF: FPGA: Xmit ZDACR\n 15-12-21 22:05:15.668 -05 000000023 INF: Y Motor: Recv 1D\r\n 15-12-21 22:05:15.669 -05 000000058 INF: X Motor: Recv MA 8707\r\n> 15-12-21 22:05:15.669 -05 000000023 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:05:15.669 -05 000000058 INF: X Motor: WaitUntilStopped 60235 15-12-21 22:05:15.670 -05 000000023 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:05:15.729 -05 000000084 INF: FPGA: Recv ZDACR 31368 15-12-21 22:05:15.730 -05 000000092 INF: Z Motor: MoveAndTrigger took 221.7676 ms w/comms 15-12-21 22:05:15.730 -05 000000092 INF: Z Motor: After move to -0.1197, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:05:15.730 -05 000000092 INF: Z Motor: MoveAbsStepped took 221.8933 ms 15-12-21 22:05:15.731 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:15.731 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:05:15.746 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:05:15.761 -05 000000048 INF: ===================Camera Arm TDI=================== 15-12-21 22:05:15.761 -05 000000054 INF: ===================TDI Scan Setup=================== 15-12-21 22:05:15.807 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:15.820 -05 000000054 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:15.835 -05 000000054 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:05:15.836 -05 000000054 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:05:15.836 -05 000000054 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:05:15.868 -05 000000025 INF: FPGA: Recv ZSEL 15-12-21 22:05:15.868 -05 000000054 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:05:15.869 -05 000000054 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:15.873 -05 000000054 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:05:15.876 -05 000000054 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:05:15.876 -05 000000054 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:05:15.949 -05 000000061 INF: FPGA: Recv ZSTEP 15-12-21 22:05:15.951 -05 000000054 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:15.954 -05 000000054 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:05:15.955 -05 000000054 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:15.974 -05 000000054 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:05:15.975 -05 000000054 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:05:15.975 -05 000000054 INF: Z Motor: Arming to move to -0.0797 mm 15-12-21 22:05:15.975 -05 000000054 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:05:16.011 -05 000000063 INF: FPGA: Recv ZYT 15-12-21 22:05:16.011 -05 000000054 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907648 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:05:16.011 -05 000000054 INF: FPGA: Xmit ZARM 20882\n 15-12-21 22:05:16.057 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:16.142 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:16.142 -05 000000082 INF: FPGA: Recv ZARM 15-12-21 22:05:16.142 -05 000000054 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 130.9964 ms 15-12-21 22:05:16.142 -05 000000054 INF: Z Motor: ArmAbsStepped took 167.4832 ms 15-12-21 22:05:16.143 -05 000000054 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:16.146 -05 000000054 INF: ===================TDI Scan Setup=================== 15-12-21 22:05:16.180 -05 000000054 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:05:16.184 -05 000000054 INF: ===================TDI Scan Setup=================== 15-12-21 22:05:16.187 -05 000000054 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:05:16.188 -05 000000054 INF: ===================TDI Scan Setup=================== 15-12-21 22:05:16.190 -05 000000054 INF: ====================================== 15-12-21 22:05:16.286 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:16.340 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:16.340 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:16.392 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:16.470 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:16.472 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:16.474 -05 000000058 INF: X Motor: Xmit PR ER\n 15-12-21 22:05:16.543 -05 000000087 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:05:16.546 -05 000000058 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:05:16.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:16.546 -05 000000058 INF: X Motor: Moved to 80.2573 after 876 ms 15-12-21 22:05:16.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:16.546 -05 000000058 INF: ====================================== 15-12-21 22:05:16.707 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:16.722 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:16.832 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:16.832 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.978C:A1\r\n 15-12-21 22:05:16.832 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:16.832 -05 000000074 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:05:16.833 -05 000000074 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:05:16.932 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:05:16.943 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:17.010 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:17.010 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:17.010 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:17.110 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:17.261 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:17.499 -05 000000048 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:05:17.500 -05 000000048 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:05:17.500 -05 000000048 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:05:17.524 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:17.543 -05 000000087 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:05:17.596 -05 000000074 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:17.597 -05 000000074 INF: ====================================== 15-12-21 22:05:18.271 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:18.352 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:18.352 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:18.460 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:18.477 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:18.477 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:18.544 -05 000000087 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:05:18.591 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:18.663 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.967C:A1\r\n 15-12-21 22:05:18.663 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:18.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:18.788 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:18.788 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:19.135 -05 000000048 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:05:19.136 -05 000000048 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:05:19.136 -05 000000048 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:05:19.138 -05 000000048 INF: ====================================== 15-12-21 22:05:19.140 -05 000000092 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:05:19.142 -05 000000092 INF: ====================================== 15-12-21 22:05:19.350 -05 000000023 INF: Y Motor: Moved to 70.6885 after 3680 ms 15-12-21 22:05:19.351 -05 000000023 INF: ====================================== 15-12-21 22:05:19.353 -05 000000029 INF: ===================Move X,Y=================== 15-12-21 22:05:19.359 -05 000000029 INF: ====================================== 15-12-21 22:05:19.370 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:05:19.375 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:19.379 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:05:19.433 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:05:19.434 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:05:19.486 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:19.487 -05 000000023 INF: FPGA: Recv ZFREQCL 15-12-21 22:05:19.488 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:05:19.488 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:19.489 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:05:19.586 -05 000000092 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:05:19.586 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 22:05:19.586 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:19.586 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:05:19.586 -05 000000087 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:05:19.587 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:05:19.588 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:05:19.589 -05 000000025 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:05:19.589 -05 000000025 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:05:19.590 -05 000000029 INF: ===================TDI FPGA Arm=================== 15-12-21 22:05:19.591 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:05:19.593 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:05:19.593 -05 000000029 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:05:19.662 -05 000000025 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:05:19.662 -05 000000023 INF: FPGA: Recv TDIYPOS 15-12-21 22:05:19.663 -05 000000025 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:05:19.664 -05 000000025 INF: ====================================== 15-12-21 22:05:19.664 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:05:19.691 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:05:19.703 -05 000000029 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:05:19.786 -05 000000092 INF: FPGA: Recv TDIYARM3 15-12-21 22:05:19.787 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:05:19.793 -05 000000029 INF: ===================TDI FPGA Arm=================== 15-12-21 22:05:19.795 -05 000000029 INF: ====================================== 15-12-21 22:05:19.802 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:05:19.806 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:19.806 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:19.807 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:19.808 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:19.817 -05 000000036 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:05:19.817 -05 000000058 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:05:19.819 -05 000000036 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:05:19.819 -05 000000036 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:05:19.819 -05 000000036 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:05:19.819 -05 000000058 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:05:19.819 -05 000000036 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:05:19.819 -05 000000058 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:05:19.819 -05 000000058 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:05:19.820 -05 000000058 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:05:19.972 -05 000000045 INF: FPGA: Recv EX1MV 15-12-21 22:05:19.972 -05 000000058 INF: Excitation Filter 1: Moved -36 steps in 153.0268 ms 15-12-21 22:05:19.972 -05 000000058 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 153.2452 ms 15-12-21 22:05:19.972 -05 000000058 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 153.3403 ms 15-12-21 22:05:19.973 -05 000000058 INF: ====================================== 15-12-21 22:05:20.043 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:20.100 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:20.100 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:20.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:20.222 -05 000000084 INF: FPGA: Recv EX2MV 15-12-21 22:05:20.222 -05 000000036 INF: Excitation Filter 2: Moved -107 steps in 403.1244 ms 15-12-21 22:05:20.222 -05 000000036 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 403.27 ms 15-12-21 22:05:20.222 -05 000000036 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 403.4142 ms 15-12-21 22:05:20.223 -05 000000036 INF: ====================================== 15-12-21 22:05:20.224 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:20.224 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:20.225 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:20.229 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:20.235 -05 000000086 INF: ===================Camera TDI=================== 15-12-21 22:05:20.235 -05 000000041 INF: ===================Move Y Motor without settling=================== 15-12-21 22:05:20.235 -05 000000022 INF: ===================FPGA Z Wait=================== 15-12-21 22:05:20.239 -05 000000041 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:05:20.239 -05 000000041 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:05:20.240 -05 000000022 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:05:20.241 -05 000000048 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:05:20.242 -05 000000086 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:05:20.249 -05 000000048 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:05:20.249 -05 000000043 INF: ===================Camera TDI=================== 15-12-21 22:05:20.249 -05 000000048 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:05:20.251 -05 000000063 INF: ===================Camera TDI=================== 15-12-21 22:05:20.267 -05 000000041 INF: Y Motor: Xmit 1G\n 15-12-21 22:05:20.285 -05 000000041 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:05:20.340 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:20.347 -05 000000041 INF: Y Motor: Recv 1G\r\n 15-12-21 22:05:20.348 -05 000000041 INF: Y Motor: Xmit 1D\n 15-12-21 22:05:20.475 -05 000000041 INF: Y Motor: Recv 1D\r\n 15-12-21 22:05:20.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:20.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:20.527 -05 000000041 INF: Y Motor: Recv *407662\r\n 15-12-21 22:05:20.528 -05 000000041 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:05:20.582 -05 000000092 INF: FPGA: Recv ZWAIT 15-12-21 22:05:20.583 -05 000000022 INF: ====================================== 15-12-21 22:05:20.599 -05 000000087 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:05:20.760 -05 000000043 INF: ===================Frame #3=================== 15-12-21 22:05:20.760 -05 000000063 INF: ===================Frame #3=================== 15-12-21 22:05:20.779 -05 000000075 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2207=================== 15-12-21 22:05:20.824 -05 000000040 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2207, Registering and Extracting C035 L001 T2209=================== 15-12-21 22:05:20.827 -05 000000066 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2207=================== 15-12-21 22:05:20.865 -05 000000060 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206=================== 15-12-21 22:05:20.910 -05 000000043 INF: ===================Frame #15=================== 15-12-21 22:05:20.910 -05 000000063 INF: ===================Frame #15=================== 15-12-21 22:05:20.923 -05 000000051 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2210=================== 15-12-21 22:05:20.923 -05 000000027 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2210, Registering and Extracting C035 L001 T2211=================== 15-12-21 22:05:21.051 -05 000000090 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2210=================== 15-12-21 22:05:21.060 -05 000000063 INF: ===================Frame #27=================== 15-12-21 22:05:21.061 -05 000000043 INF: ===================Frame #27=================== 15-12-21 22:05:21.081 -05 000000011 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206=================== 15-12-21 22:05:21.124 -05 000000031 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212, Registering and Extracting C035 L001 T2213=================== 15-12-21 22:05:21.124 -05 000000088 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212, Registering and Extracting C035 L001 T2213=================== 15-12-21 22:05:21.229 -05 000000043 INF: ===================Frame #40=================== 15-12-21 22:05:21.230 -05 000000063 INF: ===================Frame #40=================== 15-12-21 22:05:21.267 -05 000000076 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212=================== 15-12-21 22:05:21.329 -05 000000072 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212, Registering and Extracting C035 L001 T2214=================== 15-12-21 22:05:21.415 -05 000000038 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212=================== 15-12-21 22:05:21.429 -05 000000044 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212, Registering and Extracting C035 L001 T2215=================== 15-12-21 22:05:21.511 -05 000000077 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212=================== 15-12-21 22:05:21.528 -05 000000020 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212, Registering and Extracting C035 L001 T2216=================== 15-12-21 22:05:21.600 -05 000000087 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:05:21.671 -05 000000043 INF: ===================Frame #75=================== 15-12-21 22:05:21.672 -05 000000063 INF: ===================Frame #76=================== 15-12-21 22:05:21.795 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:21.818 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:21.818 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:21.822 -05 000000043 INF: ===================Frame #87=================== 15-12-21 22:05:21.931 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:21.974 -05 000000043 INF: ===================Frame #99=================== 15-12-21 22:05:21.999 -05 000000063 INF: ===================Frame #101=================== 15-12-21 22:05:22.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:22.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:22.146 -05 000000043 INF: ===================Frame #113=================== 15-12-21 22:05:22.150 -05 000000063 INF: ===================Frame #113=================== 15-12-21 22:05:22.179 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:22.206 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.988C:A1\r\n 15-12-21 22:05:22.206 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:22.305 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:22.306 -05 000000063 INF: ===================Frame #126=================== 15-12-21 22:05:22.306 -05 000000043 INF: ===================Frame #126=================== 15-12-21 22:05:22.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:22.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:22.602 -05 000000087 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:05:23.060 -05 000000063 INF: ===================Frame #185=================== 15-12-21 22:05:23.211 -05 000000063 INF: ===================Frame #197=================== 15-12-21 22:05:23.325 -05 000000043 INF: ===================Frame #206=================== 15-12-21 22:05:23.361 -05 000000063 INF: ===================Frame #209=================== 15-12-21 22:05:23.512 -05 000000063 INF: ===================Frame #221=================== 15-12-21 22:05:23.602 -05 000000087 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:05:23.626 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:23.662 -05 000000063 INF: ===================Frame #233=================== 15-12-21 22:05:23.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:23.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:23.797 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:23.811 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:23.811 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:23.812 -05 000000063 INF: ===================Frame #245=================== 15-12-21 22:05:23.913 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:23.919 -05 000000043 INF: ===================Frame #253=================== 15-12-21 22:05:23.938 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.117C:A1\r\n 15-12-21 22:05:23.938 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:23.964 -05 000000063 INF: ===================Frame #257=================== 15-12-21 22:05:24.045 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:24.062 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:24.062 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:24.071 -05 000000043 INF: ===================Frame #265=================== 15-12-21 22:05:24.115 -05 000000063 INF: ===================Frame #269=================== 15-12-21 22:05:24.226 -05 000000043 INF: ===================Frame #277=================== 15-12-21 22:05:24.266 -05 000000063 INF: ===================Frame #280=================== 15-12-21 22:05:24.377 -05 000000043 INF: ===================Frame #289=================== 15-12-21 22:05:24.528 -05 000000043 INF: ===================Frame #301=================== 15-12-21 22:05:24.602 -05 000000087 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:05:24.680 -05 000000043 INF: ===================Frame #313=================== 15-12-21 22:05:24.741 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:24.783 -05 000000063 INF: ===================Frame #321=================== 15-12-21 22:05:24.810 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:05:24.810 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:24.831 -05 000000043 INF: ===================Frame #325=================== 15-12-21 22:05:24.933 -05 000000063 INF: ===================Frame #333=================== 15-12-21 22:05:24.981 -05 000000043 INF: ===================Frame #337=================== 15-12-21 22:05:25.085 -05 000000063 INF: ===================Frame #345=================== 15-12-21 22:05:25.132 -05 000000043 INF: ===================Frame #349=================== 15-12-21 22:05:25.236 -05 000000063 INF: ===================Frame #357=================== 15-12-21 22:05:25.283 -05 000000043 INF: ===================Frame #361=================== 15-12-21 22:05:25.285 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:25.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:25.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:25.353 -05 000000040 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206, Registering and Extracting C035 L001 T2212=================== 15-12-21 22:05:25.387 -05 000000063 INF: ===================Frame #369=================== 15-12-21 22:05:25.419 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:25.441 -05 000000043 INF: ===================Frame #373=================== 15-12-21 22:05:25.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:25.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:25.538 -05 000000063 INF: ===================Frame #381=================== 15-12-21 22:05:25.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:25.592 -05 000000043 INF: ===================Frame #385=================== 15-12-21 22:05:25.602 -05 000000087 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:05:25.621 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:25.621 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:25.688 -05 000000063 INF: ===================Frame #393=================== 15-12-21 22:05:25.743 -05 000000043 INF: ===================Frame #397=================== 15-12-21 22:05:25.839 -05 000000063 INF: ===================Frame #405=================== 15-12-21 22:05:25.893 -05 000000043 INF: ===================Frame #409=================== 15-12-21 22:05:25.990 -05 000000063 INF: ===================Frame #417=================== 15-12-21 22:05:26.044 -05 000000043 INF: ===================Frame #421=================== 15-12-21 22:05:26.140 -05 000000063 INF: ===================Frame #429=================== 15-12-21 22:05:26.194 -05 000000043 INF: ===================Frame #433=================== 15-12-21 22:05:26.290 -05 000000063 INF: ===================Frame #441=================== 15-12-21 22:05:26.345 -05 000000043 INF: ===================Frame #445=================== 15-12-21 22:05:26.441 -05 000000063 INF: ===================Frame #452=================== 15-12-21 22:05:26.465 -05 000000027 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205, Registering and Extracting C035 L001 T2206=================== 15-12-21 22:05:26.496 -05 000000043 INF: ===================Frame #457=================== 15-12-21 22:05:26.532 -05 000000031 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204, Registering and Extracting C035 L001 T2205=================== 15-12-21 22:05:26.596 -05 000000051 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203, Registering and Extracting C035 L001 T2204=================== 15-12-21 22:05:26.602 -05 000000087 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:05:26.646 -05 000000043 INF: ===================Frame #469=================== 15-12-21 22:05:26.673 -05 000000044 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202, Registering and Extracting C035 L001 T2203=================== 15-12-21 22:05:26.689 -05 000000072 INF: ===================Registering and Extracting C035 L001 T2201, Registering and Extracting C035 L001 T2202=================== 15-12-21 22:05:26.704 -05 000000088 INF: ===================Registering and Extracting C035 L001 T2201=================== 15-12-21 22:05:26.716 -05 000000020 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:05:26.747 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:26.756 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:05:26.797 -05 000000043 INF: ===================Frame #481=================== 15-12-21 22:05:26.851 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:26.867 -05 000000063 INF: ===================Frame #486=================== 15-12-21 22:05:26.871 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:26.871 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:26.899 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:26.908 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:05:26.947 -05 000000043 INF: ===================Frame #493=================== 15-12-21 22:05:26.979 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:26.995 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:26.995 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:27.006 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:27.014 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:05:27.062 -05 000000063 INF: ===================Frame #502=================== 15-12-21 22:05:27.098 -05 000000043 INF: ===================Frame #504=================== 15-12-21 22:05:27.101 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:27.108 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:27.115 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:05:27.180 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:27.180 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:27.219 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:27.235 -05 000000063 INF: ===================Frame #515=================== 15-12-21 22:05:27.306 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:27.368 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.027C:A1\r\n 15-12-21 22:05:27.368 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:27.385 -05 000000063 INF: ===================Frame #527=================== 15-12-21 22:05:27.445 -05 000000087 INF: ===================WaitCommand=================== 15-12-21 22:05:27.445 -05 000000087 INF: WaitCommand(15000) end 15-12-21 22:05:27.446 -05 000000087 INF: ====================================== 15-12-21 22:05:27.448 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:27.449 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:27.452 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:27.453 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:27.506 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:27.508 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 22:05:27.519 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:27.519 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:05:27.523 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:27.543 -05 000000063 INF: ===================Frame #539=================== 15-12-21 22:05:27.572 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:05:27.572 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:27.720 -05 000000063 INF: ===================Frame #553=================== 15-12-21 22:05:27.766 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:05:28.065 -05 000000063 INF: ===================Frame #566=================== 15-12-21 22:05:28.077 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:05:28.077 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:28.187 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:28.242 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:05:28.242 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:28.346 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:28.346 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:05:28.348 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:28.403 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:28.414 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 120, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:05:28.436 -05 000000063 INF: ===================Frame #610=================== 15-12-21 22:05:28.470 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:28.474 -05 000000043 INF: ===================Frame #613=================== 15-12-21 22:05:28.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:28.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:28.503 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:05:28.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:28.594 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:05:28.594 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 22:05:28.595 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:05:28.618 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:28.618 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:28.625 -05 000000043 INF: ===================Frame #625=================== 15-12-21 22:05:28.682 -05 000000063 INF: ===================Frame #630=================== 15-12-21 22:05:28.694 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P23040R\r 15-12-21 22:05:28.714 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:28.745 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:28.745 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:28.775 -05 000000043 INF: ===================Frame #637=================== 15-12-21 22:05:28.779 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:28.879 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:28.880 -05 000000063 INF: ===================Frame #645=================== 15-12-21 22:05:28.926 -05 000000043 INF: ===================Frame #649=================== 15-12-21 22:05:28.959 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:29.031 -05 000000063 INF: ===================Frame #657=================== 15-12-21 22:05:29.045 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:29.077 -05 000000043 INF: ===================Frame #661=================== 15-12-21 22:05:29.117 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.121C:A1\r\n 15-12-21 22:05:29.117 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:29.182 -05 000000063 INF: ===================Frame #669=================== 15-12-21 22:05:29.201 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:05:29.220 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:29.228 -05 000000043 INF: ===================Frame #673=================== 15-12-21 22:05:29.272 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:29.333 -05 000000063 INF: ===================Frame #681=================== 15-12-21 22:05:29.378 -05 000000043 INF: ===================Frame #685=================== 15-12-21 22:05:29.485 -05 000000063 INF: ===================Frame #693=================== 15-12-21 22:05:29.522 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:29.528 -05 000000043 INF: ===================Frame #697=================== 15-12-21 22:05:29.584 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:29.635 -05 000000063 INF: ===================Frame #705=================== 15-12-21 22:05:29.679 -05 000000043 INF: ===================Frame #709=================== 15-12-21 22:05:29.786 -05 000000063 INF: ===================Frame #717=================== 15-12-21 22:05:29.829 -05 000000043 INF: ===================Frame #720=================== 15-12-21 22:05:29.834 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:29.904 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:29.936 -05 000000063 INF: ===================Frame #729=================== 15-12-21 22:05:29.971 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:29.991 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:05:29.991 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:30.086 -05 000000063 INF: ===================Frame #741=================== 15-12-21 22:05:30.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:30.115 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:30.115 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:30.154 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:30.223 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:30.226 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:30.238 -05 000000063 INF: ===================Frame #753=================== 15-12-21 22:05:30.268 -05 000000043 INF: ===================Frame #755=================== 15-12-21 22:05:30.302 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:30.302 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:30.389 -05 000000063 INF: ===================Frame #765=================== 15-12-21 22:05:30.408 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:30.418 -05 000000043 INF: ===================Frame #767=================== 15-12-21 22:05:30.425 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:30.425 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:30.476 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:30.536 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:30.539 -05 000000063 INF: ===================Frame #776=================== 15-12-21 22:05:30.568 -05 000000043 INF: ===================Frame #779=================== 15-12-21 22:05:30.718 -05 000000043 INF: ===================Frame #791=================== 15-12-21 22:05:30.786 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:30.847 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:30.868 -05 000000043 INF: ===================Frame #803=================== 15-12-21 22:05:30.878 -05 000000063 INF: ===================Frame #803=================== 15-12-21 22:05:31.019 -05 000000043 INF: ===================Frame #814=================== 15-12-21 22:05:31.028 -05 000000063 INF: ===================Frame #815=================== 15-12-21 22:05:31.097 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:31.159 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:31.178 -05 000000063 INF: ===================Frame #827=================== 15-12-21 22:05:31.293 -05 000000043 INF: ===================Frame #836=================== 15-12-21 22:05:31.329 -05 000000063 INF: ===================Frame #839=================== 15-12-21 22:05:31.409 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:31.471 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:31.472 -05 000000043 INF: ===================Frame #850=================== 15-12-21 22:05:31.480 -05 000000063 INF: ===================Frame #851=================== 15-12-21 22:05:31.630 -05 000000063 INF: ===================Frame #863=================== 15-12-21 22:05:31.640 -05 000000043 INF: ===================Frame #864=================== 15-12-21 22:05:31.659 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:31.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:31.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:31.722 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:31.782 -05 000000063 INF: ===================Frame #875=================== 15-12-21 22:05:31.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:31.787 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:31.800 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:31.800 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:31.821 -05 000000043 INF: ===================Frame #878=================== 15-12-21 22:05:31.908 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:31.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:31.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:31.933 -05 000000063 INF: ===================Frame #887=================== 15-12-21 22:05:31.989 -05 000000043 INF: ===================Frame #891=================== 15-12-21 22:05:32.037 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:32.084 -05 000000063 INF: ===================Frame #899=================== 15-12-21 22:05:32.096 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:32.139 -05 000000043 INF: ===================Frame #903=================== 15-12-21 22:05:32.234 -05 000000063 INF: ===================Frame #910=================== 15-12-21 22:05:32.289 -05 000000043 INF: ===================Frame #915=================== 15-12-21 22:05:32.346 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:32.409 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:32.439 -05 000000043 INF: ===================Frame #927=================== 15-12-21 22:05:32.506 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:32.548 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.991C:A1\r\n 15-12-21 22:05:32.548 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:32.563 -05 000000063 INF: ===================Frame #936=================== 15-12-21 22:05:32.589 -05 000000043 INF: ===================Frame #939=================== 15-12-21 22:05:32.659 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:32.720 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:32.739 -05 000000043 INF: ===================Frame #950=================== 15-12-21 22:05:32.748 -05 000000063 INF: ===================Frame #951=================== 15-12-21 22:05:32.901 -05 000000063 INF: ===================Frame #963=================== 15-12-21 22:05:32.970 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:32.984 -05 000000043 INF: ===================Frame #970=================== 15-12-21 22:05:33.031 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:33.052 -05 000000063 INF: ===================Frame #975=================== 15-12-21 22:05:33.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:33.158 -05 000000043 INF: ===================Frame #984=================== 15-12-21 22:05:33.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:33.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:33.202 -05 000000063 INF: ===================Frame #987=================== 15-12-21 22:05:33.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:33.284 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:33.297 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:33.297 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:33.325 -05 000000043 INF: ===================Frame #997=================== 15-12-21 22:05:33.342 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:33.352 -05 000000063 INF: ===================Frame #999=================== 15-12-21 22:05:33.400 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:33.422 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:33.422 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:33.476 -05 000000043 INF: ===================Frame #1009=================== 15-12-21 22:05:33.506 -05 000000063 INF: ===================Frame #1011=================== 15-12-21 22:05:33.592 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:33.626 -05 000000043 INF: ===================Frame #1021=================== 15-12-21 22:05:33.655 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:33.656 -05 000000063 INF: ===================Frame #1023=================== 15-12-21 22:05:33.776 -05 000000043 INF: ===================Frame #1032=================== 15-12-21 22:05:33.807 -05 000000063 INF: ===================Frame #1035=================== 15-12-21 22:05:33.905 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:33.957 -05 000000063 INF: ===================Frame #1047=================== 15-12-21 22:05:33.967 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:33.979 -05 000000043 INF: ===================Frame #1048=================== 15-12-21 22:05:34.108 -05 000000063 INF: ===================Frame #1059=================== 15-12-21 22:05:34.145 -05 000000043 INF: ===================Frame #1062=================== 15-12-21 22:05:34.217 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:34.220 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:34.259 -05 000000063 INF: ===================Frame #1071=================== 15-12-21 22:05:34.280 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:34.280 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:05:34.296 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.747C:A1\r\n 15-12-21 22:05:34.296 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:34.311 -05 000000043 INF: ===================Frame #1075=================== 15-12-21 22:05:34.380 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:05:34.409 -05 000000063 INF: ===================Frame #1082=================== 15-12-21 22:05:34.461 -05 000000043 INF: ===================Frame #1086=================== 15-12-21 22:05:34.466 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 22:05:34.466 -05 000000057 INF: Current Position of Pump is: 23040 15-12-21 22:05:34.466 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:05:34.566 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:05:34.649 -05 000000043 INF: ===================Frame #1101=================== 15-12-21 22:05:34.652 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:34.655 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:34.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:34.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:34.722 -05 000000063 INF: ===================Frame #1107=================== 15-12-21 22:05:34.755 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:34.773 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:34.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:34.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:34.799 -05 000000043 INF: ===================Frame #1113=================== 15-12-21 22:05:34.840 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:34.872 -05 000000063 INF: ===================Frame #1119=================== 15-12-21 22:05:34.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:34.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:34.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:34.950 -05 000000043 INF: ===================Frame #1125=================== 15-12-21 22:05:35.022 -05 000000063 INF: ===================Frame #1131=================== 15-12-21 22:05:35.090 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:35.096 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:35.100 -05 000000043 INF: ===================Frame #1137=================== 15-12-21 22:05:35.108 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.013C:A1\r\n 15-12-21 22:05:35.108 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:35.154 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:35.157 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:35.157 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:05:35.172 -05 000000063 INF: ===================Frame #1143=================== 15-12-21 22:05:35.211 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:35.232 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:05:35.232 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:35.250 -05 000000043 INF: ===================Frame #1149=================== 15-12-21 22:05:35.322 -05 000000063 INF: ===================Frame #1155=================== 15-12-21 22:05:35.335 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:05:35.358 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:05:35.358 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:35.400 -05 000000043 INF: ===================Frame #1161=================== 15-12-21 22:05:35.461 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:35.472 -05 000000063 INF: ===================Frame #1166=================== 15-12-21 22:05:35.481 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:05:35.481 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:35.550 -05 000000043 INF: ===================Frame #1173=================== 15-12-21 22:05:35.584 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:35.584 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:35.588 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:35.589 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:35.592 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:35.595 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°=================== 15-12-21 22:05:35.595 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:20.00\r 15-12-21 22:05:35.605 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:05:35.605 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:35.700 -05 000000043 INF: ===================Frame #1184=================== 15-12-21 22:05:35.706 -05 000000063 INF: ===================Frame #1185=================== 15-12-21 22:05:35.707 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:0:1\r 15-12-21 22:05:35.731 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:05:35.731 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:35.833 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:35.833 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:35.834 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:35.835 -05 000000057 INF: WaitCommand(15000) start 15-12-21 22:05:35.835 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 15 of 15 seconds left=================== 15-12-21 22:05:35.856 -05 000000063 INF: ===================Frame #1197=================== 15-12-21 22:05:35.956 -05 000000043 INF: ===================Frame #1205=================== 15-12-21 22:05:36.007 -05 000000063 INF: ===================Frame #1209=================== 15-12-21 22:05:36.107 -05 000000043 INF: ===================Frame #1217=================== 15-12-21 22:05:36.144 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:36.157 -05 000000063 INF: ===================Frame #1221=================== 15-12-21 22:05:36.167 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:36.167 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:36.257 -05 000000043 INF: ===================Frame #1228=================== 15-12-21 22:05:36.266 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:36.298 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:36.298 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:36.307 -05 000000063 INF: ===================Frame #1232=================== 15-12-21 22:05:36.402 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:36.419 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:36.419 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:36.454 -05 000000043 INF: ===================Frame #1244=================== 15-12-21 22:05:36.526 -05 000000063 INF: ===================Frame #1250=================== 15-12-21 22:05:36.541 -05 000000092 INF: FPGA: Recv TDIYWAIT 15-12-21 22:05:36.542 -05 000000048 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:05:36.546 -05 000000063 INF: Camera complete - got 1250 frames. 15-12-21 22:05:36.547 -05 000000048 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:05:36.550 -05 000000063 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:05:36.551 -05 000000058 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:05:36.551 -05 000000058 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:05:36.551 -05 000000058 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:05:36.551 -05 000000055 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:05:36.551 -05 000000058 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:05:36.551 -05 000000058 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:05:36.552 -05 000000055 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:05:36.552 -05 000000055 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:05:36.552 -05 000000055 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:05:36.560 -05 000000055 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:05:36.726 -05 000000028 INF: FPGA: Recv EX1MV 15-12-21 22:05:36.727 -05 000000058 INF: Excitation Filter 1: Moved 36 steps in 175.2617 ms 15-12-21 22:05:36.727 -05 000000058 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 175.3603 ms 15-12-21 22:05:36.727 -05 000000058 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 175.4562 ms 15-12-21 22:05:36.729 -05 000000058 INF: ====================================== 15-12-21 22:05:36.836 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:36.836 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 14 of 15 seconds left=================== 15-12-21 22:05:36.953 -05 000000081 INF: FPGA: Recv EX2MV 15-12-21 22:05:36.953 -05 000000055 INF: Excitation Filter 2: Moved 107 steps in 401.3128 ms 15-12-21 22:05:36.953 -05 000000055 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 401.4384 ms 15-12-21 22:05:36.953 -05 000000055 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 401.5612 ms 15-12-21 22:05:36.954 -05 000000055 INF: ====================================== 15-12-21 22:05:36.959 -05 000000048 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:05:36.962 -05 000000048 INF: ====================================== 15-12-21 22:05:37.123 -05 000000041 INF: Y Motor: Moved to 9.0765 after 16594 ms 15-12-21 22:05:37.124 -05 000000041 INF: ====================================== 15-12-21 22:05:37.182 -05 000000043 INF: ===================Frame #1250=================== 15-12-21 22:05:37.182 -05 000000063 INF: ===================Camera TDI=================== 15-12-21 22:05:37.191 -05 000000043 INF: Camera complete - got 1250 frames. 15-12-21 22:05:37.192 -05 000000043 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:05:37.204 -05 000000063 INF: ====================================== 15-12-21 22:05:37.312 -05 000000043 INF: ===================Camera TDI=================== 15-12-21 22:05:37.336 -05 000000043 INF: ====================================== 15-12-21 22:05:37.340 -05 000000086 INF: ===================Camera TDI=================== 15-12-21 22:05:37.342 -05 000000086 INF: ====================================== 15-12-21 22:05:37.347 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:37.349 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:37.350 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.350 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:05:37.382 -05 000000041 INF: FPGA: Recv TDICLINES 9999 15-12-21 22:05:37.382 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:05:37.446 -05 000000025 INF: FPGA: Recv TDIYERD 907649 15-12-21 22:05:37.446 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:05:37.506 -05 000000086 INF: FPGA: Recv ZADCR 25243 15-12-21 22:05:37.506 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.096. Y moved -60.304 mm 15-12-21 22:05:37.506 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:05:37.597 -05 000000049 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:05:37.597 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:05:37.597 -05 000000062 INF: TDIScan finished after 22121.4929 ms 15-12-21 22:05:37.597 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:05:37.597 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:05:37.602 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.628 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.119 um 15-12-21 22:05:37.629 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.631 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.634 -05 000000041 INF: ===================Dither Clean Up Command=================== 15-12-21 22:05:37.636 -05 000000087 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:05:37.636 -05 000000045 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:05:37.637 -05 000000087 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:05:37.640 -05 000000065 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:05:37.641 -05 000000065 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:05:37.641 -05 000000065 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:05:37.641 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:05:37.641 -05 000000058 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:05:37.644 -05 000000025 INF: ===================LFT:Extracting coords=================== 15-12-21 22:05:37.646 -05 000000058 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:05:37.649 -05 000000063 INF: FPGA: Recv ZSTEP 15-12-21 22:05:37.649 -05 000000063 INF: FPGA: Recv ZSEL 15-12-21 22:05:37.649 -05 000000058 INF: FPGA: Xmit ZDACW 31368\n 15-12-21 22:05:37.649 -05 000000065 INF: ====================================== 15-12-21 22:05:37.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:37.684 -05 000000087 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:05:37.685 -05 000000045 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:05:37.685 -05 000000087 INF: ====================================== 15-12-21 22:05:37.689 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:05:37.692 -05 000000025 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:05:37.696 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:37.696 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:37.696 -05 000000048 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:37.696 -05 000000068 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:05:37.697 -05 000000048 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:05:37.700 -05 000000023 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:05:37.700 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:37.703 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:05:37.710 -05 000000036 INF: FPGA: Recv ZDACW 15-12-21 22:05:37.711 -05 000000058 INF: ====================================== 15-12-21 22:05:37.742 -05 000000045 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:05:37.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:37.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:37.743 -05 000000045 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:05:37.743 -05 000000045 INF: ====================================== 15-12-21 22:05:37.836 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:37.836 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 13 of 15 seconds left=================== 15-12-21 22:05:37.855 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:37.872 -05 000000068 INF: LFT found best fwhm score 2.241928 in 125 ms 15-12-21 22:05:37.872 -05 000000068 INF: LFT found good score at index 2961 with fwhm value 2.241928. Next cycle, cycle 36 starting Z position for bottom surface is at -0.102 mm FC:B, C:35,L:2,B 15-12-21 22:05:37.882 -05 000000023 INF: LFT found best fwhm score 2.554578 in 135 ms 15-12-21 22:05:37.882 -05 000000023 INF: LFT found good score at index 4665 with fwhm value 2.554578. Next cycle, cycle 36 starting Z position for bottom surface is at -0.101 mm FC:B, C:35,L:2,B 15-12-21 22:05:37.882 -05 000000048 INF: LFT found best fwhm score 2.476862 in 135 ms 15-12-21 22:05:37.882 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:37.882 -05 000000048 INF: LFT found good score at index 4145 with fwhm value 2.476862. Next cycle, cycle 36 starting Z position for bottom surface is at -0.101 mm FC:B, C:35,L:2,B 15-12-21 22:05:37.882 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:37.883 -05 000000048 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:37.883 -05 000000068 INF: ====================================== 15-12-21 22:05:37.883 -05 000000023 INF: ====================================== 15-12-21 22:05:37.883 -05 000000048 INF: ====================================== 15-12-21 22:05:37.981 -05 000000055 INF: LFT found best fwhm score 2.519637 in 232 ms 15-12-21 22:05:37.981 -05 000000055 INF: LFT found good score at index 5929 with fwhm value 2.519637. Next cycle, cycle 36 starting Z position for bottom surface is at -0.101 mm FC:B, C:35,L:2,B 15-12-21 22:05:37.982 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:05:37.982 -05 000000055 INF: ====================================== 15-12-21 22:05:37.987 -05 000000025 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:05:37.989 -05 000000025 INF: LFT weighted average best Z for bottom surface is at -0.101mm FC:B, C:35,L:2,B 15-12-21 22:05:37.990 -05 000000025 INF: ====================================== 15-12-21 22:05:37.993 -05 000000041 INF: ====================================== 15-12-21 22:05:37.995 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.996 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:05:37.997 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.997 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:05:37.997 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.997 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:05:37.997 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.999 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:05:37.999 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:37.999 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:05:38.000 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:05:38.001 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 13 of 15 seconds left, Waiting for image analysis=================== 15-12-21 22:05:38.001 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 13 of 15 seconds left=================== 15-12-21 22:05:38.002 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:05:38.002 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:05:38.002 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:05:38.002 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:05:38.002 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:05:38.002 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:38.003 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:05:38.003 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:05:38.012 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.995C:A1\r\n 15-12-21 22:05:38.012 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:38.026 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:38.026 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:05:38.027 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:38.027 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -119.7 um, section = B_1 15-12-21 22:05:38.031 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:05:38.033 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:05:38.039 -05 000000064 INF: ===================MoveEmissionFilters=================== 15-12-21 22:05:38.040 -05 000000081 INF: ===================Move X,Y=================== 15-12-21 22:05:38.040 -05 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:05:38.044 -05 000000081 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:05:38.046 -05 000000048 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:05:38.046 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:05:38.046 -05 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:05:38.047 -05 000000055 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:05:38.047 -05 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:05:38.047 -05 000000009 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:05:38.050 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:05:38.052 -05 000000087 INF: ===================Move X Motor without settling=================== 15-12-21 22:05:38.052 -05 000000058 INF: ===================Move Y Motor without settling=================== 15-12-21 22:05:38.052 -05 000000055 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:05:38.052 -05 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:05:38.052 -05 000000087 INF: X Motor: Xmit PR VM\n 15-12-21 22:05:38.052 -05 000000048 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:05:38.056 -05 000000058 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:05:38.059 -05 000000058 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:05:38.059 -05 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:05:38.061 -05 000000058 INF: Y Motor: Xmit 1G\n 15-12-21 22:05:38.062 -05 000000037 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:05:38.062 -05 000000086 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:05:38.062 -05 000000082 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:05:38.062 -05 000000065 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:05:38.066 -05 000000092 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:05:38.067 -05 000000036 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:05:38.071 -05 000000036 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:05:38.074 -05 000000092 INF: ====================================== 15-12-21 22:05:38.074 -05 000000082 INF: ====================================== 15-12-21 22:05:38.074 -05 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:05:38.074 -05 000000036 INF: ====================================== 15-12-21 22:05:38.078 -05 000000061 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:05:38.078 -05 000000087 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:05:38.078 -05 000000087 INF: X Motor: Xmit PR VI\n 15-12-21 22:05:38.081 -05 000000043 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:05:38.081 -05 000000065 INF: ====================================== 15-12-21 22:05:38.082 -05 000000061 INF: ====================================== 15-12-21 22:05:38.084 -05 000000086 INF: ====================================== 15-12-21 22:05:38.087 -05 000000043 INF: ====================================== 15-12-21 22:05:38.092 -05 000000037 INF: ====================================== 15-12-21 22:05:38.101 -05 000000048 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:05:38.106 -05 000000068 INF: ===================Camera Arm TDI=================== 15-12-21 22:05:38.106 -05 000000041 INF: ===================TDI Scan Setup=================== 15-12-21 22:05:38.107 -05 000000025 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:05:38.107 -05 000000055 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:05:38.110 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:05:38.110 -05 000000041 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:38.110 -05 000000048 INF: ====================================== 15-12-21 22:05:38.114 -05 000000025 INF: ====================================== 15-12-21 22:05:38.114 -05 000000041 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:05:38.114 -05 000000041 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:05:38.118 -05 000000041 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:05:38.118 -05 000000029 INF: ====================================== 15-12-21 22:05:38.118 -05 000000055 INF: ====================================== 15-12-21 22:05:38.131 -05 000000064 INF: ====================================== 15-12-21 22:05:38.133 -05 000000058 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:05:38.135 -05 000000087 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:05:38.135 -05 000000087 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:05:38.135 -05 000000087 INF: X Motor: Moving to 81.0290 mm @15.000 mm/sec, started at 80.2573 mm 15-12-21 22:05:38.135 -05 000000058 INF: Y Motor: Recv 1G\r\n 15-12-21 22:05:38.135 -05 000000087 INF: X Motor: Xmit MA 9023\n 15-12-21 22:05:38.137 -05 000000058 INF: Y Motor: Xmit 1D\n 15-12-21 22:05:38.169 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:38.169 -05 000000082 INF: FPGA: Recv ZSEL 15-12-21 22:05:38.172 -05 000000041 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:05:38.172 -05 000000041 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:38.182 -05 000000041 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:05:38.185 -05 000000041 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:05:38.185 -05 000000041 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:05:38.196 -05 000000058 INF: Y Motor: Recv 1D\r\n 15-12-21 22:05:38.197 -05 000000033 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104=================== 15-12-21 22:05:38.197 -05 000000056 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104=================== 15-12-21 22:05:38.197 -05 000000044 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105=================== 15-12-21 22:05:38.197 -05 000000020 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104=================== 15-12-21 22:05:38.197 -05 000000034 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106=================== 15-12-21 22:05:38.197 -05 000000072 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106=================== 15-12-21 22:05:38.198 -05 000000087 INF: X Motor: Recv MA 9023\r\n> 15-12-21 22:05:38.198 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:38.198 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:38.198 -05 000000058 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:05:38.198 -05 000000031 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:38.198 -05 000000087 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:05:38.199 -05 000000058 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:05:38.200 -05 000000088 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2108=================== 15-12-21 22:05:38.242 -05 000000028 INF: FPGA: Recv ZSTEP 15-12-21 22:05:38.242 -05 000000041 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:38.245 -05 000000041 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:05:38.245 -05 000000041 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:38.257 -05 000000041 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:05:38.257 -05 000000041 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:05:38.257 -05 000000041 INF: Z Motor: Arming to move to -0.0797 mm 15-12-21 22:05:38.258 -05 000000041 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:05:38.316 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:38.318 -05 000000074 INF: FPGA: Recv ZYT 15-12-21 22:05:38.318 -05 000000041 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907646 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:05:38.318 -05 000000041 INF: FPGA: Xmit ZARM 20882\n 15-12-21 22:05:38.380 -05 000000065 INF: FPGA: Recv ZARM 15-12-21 22:05:38.380 -05 000000041 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.2311 ms 15-12-21 22:05:38.380 -05 000000041 INF: Z Motor: ArmAbsStepped took 122.7082 ms 15-12-21 22:05:38.381 -05 000000041 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:05:38.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:38.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:38.384 -05 000000041 INF: ===================TDI Scan Setup=================== 15-12-21 22:05:38.431 -05 000000041 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:05:38.432 -05 000000041 INF: ===================TDI Scan Setup=================== 15-12-21 22:05:38.490 -05 000000041 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:05:38.521 -05 000000041 INF: ===================TDI Scan Setup=================== 15-12-21 22:05:38.568 -05 000000041 INF: ====================================== 15-12-21 22:05:38.711 -05 000000087 INF: X Motor: Xmit PR ER\n 15-12-21 22:05:38.776 -05 000000087 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:05:38.776 -05 000000087 INF: X Motor: Moved to 81.0288 after 578 ms 15-12-21 22:05:38.777 -05 000000087 INF: ====================================== 15-12-21 22:05:38.852 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:38.853 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 12 of 15 seconds left=================== 15-12-21 22:05:39.393 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:39.416 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.884C:A1\r\n 15-12-21 22:05:39.430 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:39.644 -05 000000068 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:05:39.644 -05 000000068 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:05:39.644 -05 000000068 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:05:39.774 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:39.850 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:39.850 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:39.854 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:39.854 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 11 of 15 seconds left=================== 15-12-21 22:05:39.979 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:40.037 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:40.037 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:40.164 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:40.240 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:40.240 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:40.360 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:40.427 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:05:40.427 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:40.854 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:40.854 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 10 of 15 seconds left=================== 15-12-21 22:05:41.278 -05 000000068 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:05:41.278 -05 000000068 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:05:41.278 -05 000000068 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:05:41.280 -05 000000068 INF: ====================================== 15-12-21 22:05:41.290 -05 000000009 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:05:41.295 -05 000000009 INF: ====================================== 15-12-21 22:05:41.598 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:41.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:41.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:41.764 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:41.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:41.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:41.857 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:41.857 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 9 of 15 seconds left=================== 15-12-21 22:05:41.885 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:41.910 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:41.910 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:41.973 -05 000000058 INF: Y Motor: Moved to 70.6885 after 3773 ms 15-12-21 22:05:41.974 -05 000000058 INF: ====================================== 15-12-21 22:05:41.976 -05 000000081 INF: ===================Move X,Y=================== 15-12-21 22:05:41.978 -05 000000081 INF: ====================================== 15-12-21 22:05:41.983 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:05:41.992 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:41.992 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:05:42.033 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:05:42.034 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:05:42.095 -05 000000043 INF: FPGA: Recv ZFREQCL 15-12-21 22:05:42.096 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:05:42.097 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:42.097 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:05:42.157 -05 000000036 INF: FPGA: Recv TDIYERD 7068848 15-12-21 22:05:42.157 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068848 counts (70.688 mm) 15-12-21 22:05:42.159 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:05:42.159 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:05:42.173 -05 000000047 INF: ===================TDI FPGA Arm=================== 15-12-21 22:05:42.173 -05 000000074 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:05:42.173 -05 000000074 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:05:42.177 -05 000000047 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:05:42.185 -05 000000047 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:05:42.185 -05 000000047 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:05:42.219 -05 000000043 INF: FPGA: Recv TDIYPOS 15-12-21 22:05:42.220 -05 000000074 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:05:42.220 -05 000000047 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:05:42.221 -05 000000074 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:05:42.221 -05 000000074 INF: ====================================== 15-12-21 22:05:42.227 -05 000000047 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:05:42.227 -05 000000047 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:05:42.281 -05 000000054 INF: FPGA: Recv TDIYARM3 15-12-21 22:05:42.282 -05 000000047 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:05:42.285 -05 000000047 INF: ===================TDI FPGA Arm=================== 15-12-21 22:05:42.293 -05 000000047 INF: ====================================== 15-12-21 22:05:42.299 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:05:42.302 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:42.304 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:42.307 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:42.309 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:42.312 -05 000000043 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:05:42.312 -05 000000029 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:05:42.312 -05 000000043 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:05:42.312 -05 000000043 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:05:42.313 -05 000000043 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:05:42.315 -05 000000043 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:05:42.315 -05 000000029 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:05:42.315 -05 000000029 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:05:42.315 -05 000000029 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:05:42.322 -05 000000029 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:05:42.494 -05 000000082 INF: FPGA: Recv EX1MV 15-12-21 22:05:42.494 -05 000000043 INF: Excitation Filter 1: Moved -36 steps in 181.4668 ms 15-12-21 22:05:42.494 -05 000000043 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 181.7472 ms 15-12-21 22:05:42.494 -05 000000043 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 181.838 ms 15-12-21 22:05:42.496 -05 000000043 INF: ====================================== 15-12-21 22:05:42.733 -05 000000074 INF: FPGA: Recv EX2MV 15-12-21 22:05:42.734 -05 000000029 INF: Excitation Filter 2: Moved -107 steps in 418.6016 ms 15-12-21 22:05:42.734 -05 000000029 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 418.7359 ms 15-12-21 22:05:42.734 -05 000000029 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 420.8681 ms 15-12-21 22:05:42.735 -05 000000029 INF: ====================================== 15-12-21 22:05:42.737 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:42.739 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:42.745 -05 000000081 INF: ===================Camera TDI=================== 15-12-21 22:05:42.745 -05 000000009 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:05:42.745 -05 000000041 INF: ===================FPGA Z Wait=================== 15-12-21 22:05:42.746 -05 000000041 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:05:42.746 -05 000000065 INF: ===================Move Y Motor without settling=================== 15-12-21 22:05:42.746 -05 000000065 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:05:42.749 -05 000000065 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:05:42.749 -05 000000065 INF: Y Motor: Xmit 1G\n 15-12-21 22:05:42.749 -05 000000081 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:05:42.775 -05 000000009 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:05:42.775 -05 000000009 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:05:42.779 -05 000000049 INF: ===================Camera TDI=================== 15-12-21 22:05:42.779 -05 000000092 INF: ===================Camera TDI=================== 15-12-21 22:05:42.801 -05 000000065 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:05:42.804 -05 000000065 INF: Y Motor: Recv 1G\r\n 15-12-21 22:05:42.805 -05 000000065 INF: Y Motor: Xmit 1D\n 15-12-21 22:05:42.849 -05 000000034 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:42.861 -05 000000065 INF: Y Motor: Recv 1D\r\n 15-12-21 22:05:42.861 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:42.861 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 8 of 15 seconds left=================== 15-12-21 22:05:42.862 -05 000000065 INF: Y Motor: Recv *407662\r\n 15-12-21 22:05:42.863 -05 000000065 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:05:42.928 -05 000000027 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2109=================== 15-12-21 22:05:43.052 -05 000000064 INF: FPGA: Recv ZWAIT 15-12-21 22:05:43.053 -05 000000041 INF: ====================================== 15-12-21 22:05:43.148 -05 000000020 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:43.167 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:43.282 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:43.282 -05 000000092 INF: ===================Frame #6=================== 15-12-21 22:05:43.282 -05 000000051 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2110=================== 15-12-21 22:05:43.282 -05 000000049 INF: ===================Frame #6=================== 15-12-21 22:05:43.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:43.450 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:43.475 -05 000000044 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:43.481 -05 000000040 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2111=================== 15-12-21 22:05:43.502 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.982C:A1\r\n 15-12-21 22:05:43.502 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:43.540 -05 000000049 INF: ===================Frame #27=================== 15-12-21 22:05:43.540 -05 000000092 INF: ===================Frame #27=================== 15-12-21 22:05:43.656 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:43.691 -05 000000092 INF: ===================Frame #39=================== 15-12-21 22:05:43.691 -05 000000049 INF: ===================Frame #39=================== 15-12-21 22:05:43.720 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:43.720 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:43.773 -05 000000072 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:43.780 -05 000000077 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2112=================== 15-12-21 22:05:43.843 -05 000000092 INF: ===================Frame #51=================== 15-12-21 22:05:43.843 -05 000000049 INF: ===================Frame #51=================== 15-12-21 22:05:43.848 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:43.856 -05 000000056 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:43.861 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:43.861 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 7 of 15 seconds left=================== 15-12-21 22:05:43.880 -05 000000038 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2113=================== 15-12-21 22:05:43.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:43.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:43.993 -05 000000092 INF: ===================Frame #63=================== 15-12-21 22:05:43.993 -05 000000049 INF: ===================Frame #63=================== 15-12-21 22:05:44.009 -05 000000033 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:44.080 -05 000000066 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2114=================== 15-12-21 22:05:44.144 -05 000000049 INF: ===================Frame #75=================== 15-12-21 22:05:44.145 -05 000000092 INF: ===================Frame #75=================== 15-12-21 22:05:44.218 -05 000000031 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:44.288 -05 000000011 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2115=================== 15-12-21 22:05:44.296 -05 000000049 INF: ===================Frame #87=================== 15-12-21 22:05:44.296 -05 000000092 INF: ===================Frame #87=================== 15-12-21 22:05:44.331 -05 000000088 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:44.387 -05 000000060 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107, Registering and Extracting C035 L002 T2116=================== 15-12-21 22:05:44.447 -05 000000092 INF: ===================Frame #99=================== 15-12-21 22:05:44.447 -05 000000049 INF: ===================Frame #99=================== 15-12-21 22:05:44.576 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:44.597 -05 000000092 INF: ===================Frame #111=================== 15-12-21 22:05:44.598 -05 000000049 INF: ===================Frame #111=================== 15-12-21 22:05:44.632 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 55.527C:A1\r\n 15-12-21 22:05:44.632 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:44.749 -05 000000049 INF: ===================Frame #122=================== 15-12-21 22:05:44.749 -05 000000092 INF: ===================Frame #122=================== 15-12-21 22:05:44.862 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:44.862 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 6 of 15 seconds left=================== 15-12-21 22:05:45.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:45.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:45.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:45.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:45.358 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:45.358 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:45.507 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:45.575 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:45.575 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:45.684 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:45.701 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:05:45.701 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:45.864 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:45.864 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 5 of 15 seconds left=================== 15-12-21 22:05:45.981 -05 000000092 INF: ===================Frame #220=================== 15-12-21 22:05:45.985 -05 000000049 INF: ===================Frame #220=================== 15-12-21 22:05:46.870 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:46.886 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:46.886 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:46.903 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:46.904 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 4 of 15 seconds left=================== 15-12-21 22:05:46.968 -05 000000049 INF: ===================Frame #298=================== 15-12-21 22:05:46.974 -05 000000092 INF: ===================Frame #298=================== 15-12-21 22:05:46.988 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:47.010 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:47.010 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:47.147 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:47.199 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:47.199 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:47.299 -05 000000027 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106, Registering and Extracting C035 L002 T2107=================== 15-12-21 22:05:47.664 -05 000000049 INF: ===================Frame #353=================== 15-12-21 22:05:47.664 -05 000000092 INF: ===================Frame #353=================== 15-12-21 22:05:47.813 -05 000000051 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105, Registering and Extracting C035 L002 T2106=================== 15-12-21 22:05:47.814 -05 000000049 INF: ===================Frame #365=================== 15-12-21 22:05:47.814 -05 000000092 INF: ===================Frame #365=================== 15-12-21 22:05:47.904 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:47.905 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 3 of 15 seconds left=================== 15-12-21 22:05:47.927 -05 000000040 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104, Registering and Extracting C035 L002 T2105=================== 15-12-21 22:05:47.964 -05 000000049 INF: ===================Frame #377=================== 15-12-21 22:05:47.967 -05 000000092 INF: ===================Frame #377=================== 15-12-21 22:05:48.118 -05 000000092 INF: ===================Frame #389=================== 15-12-21 22:05:48.118 -05 000000049 INF: ===================Frame #389=================== 15-12-21 22:05:48.269 -05 000000049 INF: ===================Frame #401=================== 15-12-21 22:05:48.269 -05 000000092 INF: ===================Frame #401=================== 15-12-21 22:05:48.422 -05 000000049 INF: ===================Frame #413=================== 15-12-21 22:05:48.422 -05 000000092 INF: ===================Frame #413=================== 15-12-21 22:05:48.444 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:48.462 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:48.462 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:48.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:48.574 -05 000000049 INF: ===================Frame #425=================== 15-12-21 22:05:48.574 -05 000000092 INF: ===================Frame #425=================== 15-12-21 22:05:48.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:48.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:48.724 -05 000000049 INF: ===================Frame #437=================== 15-12-21 22:05:48.724 -05 000000092 INF: ===================Frame #437=================== 15-12-21 22:05:48.752 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:48.774 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.025C:A1\r\n 15-12-21 22:05:48.774 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:48.875 -05 000000092 INF: ===================Frame #449=================== 15-12-21 22:05:48.875 -05 000000049 INF: ===================Frame #449=================== 15-12-21 22:05:48.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:48.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:48.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:48.905 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:48.905 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 2 of 15 seconds left=================== 15-12-21 22:05:49.025 -05 000000049 INF: ===================Frame #461=================== 15-12-21 22:05:49.025 -05 000000092 INF: ===================Frame #461=================== 15-12-21 22:05:49.175 -05 000000049 INF: ===================Frame #472=================== 15-12-21 22:05:49.176 -05 000000092 INF: ===================Frame #473=================== 15-12-21 22:05:49.293 -05 000000038 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103, Registering and Extracting C035 L002 T2104=================== 15-12-21 22:05:49.326 -05 000000092 INF: ===================Frame #484=================== 15-12-21 22:05:49.620 -05 000000049 INF: ===================Frame #508=================== 15-12-21 22:05:49.743 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:49.760 -05 000000092 INF: ===================Frame #519=================== 15-12-21 22:05:49.770 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 50.950C:A1\r\n 15-12-21 22:05:49.770 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:49.814 -05 000000049 INF: ===================Frame #523=================== 15-12-21 22:05:49.907 -05 000000066 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102, Registering and Extracting C035 L002 T2103=================== 15-12-21 22:05:49.908 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:49.908 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 1 of 15 seconds left=================== 15-12-21 22:05:49.910 -05 000000092 INF: ===================Frame #531=================== 15-12-21 22:05:49.967 -05 000000049 INF: ===================Frame #535=================== 15-12-21 22:05:50.000 -05 000000077 INF: ===================Registering and Extracting C035 L002 T2101, Registering and Extracting C035 L002 T2102=================== 15-12-21 22:05:50.035 -05 000000060 INF: ===================Registering and Extracting C035 L002 T2101=================== 15-12-21 22:05:50.060 -05 000000092 INF: ===================Frame #542=================== 15-12-21 22:05:50.117 -05 000000049 INF: ===================Frame #547=================== 15-12-21 22:05:50.125 -05 000000011 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:05:50.139 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:50.148 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:05:50.194 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:50.208 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:50.208 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:50.269 -05 000000049 INF: ===================Frame #559=================== 15-12-21 22:05:50.282 -05 000000092 INF: ===================Frame #560=================== 15-12-21 22:05:50.284 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:50.290 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:05:50.314 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:50.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:50.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:50.422 -05 000000049 INF: ===================Frame #571=================== 15-12-21 22:05:50.437 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:50.455 -05 000000092 INF: ===================Frame #574=================== 15-12-21 22:05:50.459 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:50.459 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:50.471 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:50.480 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:05:50.573 -05 000000049 INF: ===================Frame #583=================== 15-12-21 22:05:50.583 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:50.589 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:05:50.631 -05 000000092 INF: ===================Frame #587=================== 15-12-21 22:05:50.686 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:05:50.724 -05 000000049 INF: ===================Frame #595=================== 15-12-21 22:05:50.781 -05 000000092 INF: ===================Frame #599=================== 15-12-21 22:05:50.837 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:50.837 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:50.837 -05 000000057 INF: WaitCommand(15000) end 15-12-21 22:05:50.837 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:05:50.838 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:50.838 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:50.846 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:05:50.846 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:50.860 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:50.884 -05 000000049 INF: ===================Frame #607=================== 15-12-21 22:05:50.902 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:50.903 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Selecting Reagent USM (3)=================== 15-12-21 22:05:50.903 -05 000000057 INF: Valve A2: Go to position 3 15-12-21 22:05:50.903 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:05:50.906 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:05:50.906 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:50.931 -05 000000092 INF: ===================Frame #611=================== 15-12-21 22:05:50.956 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 22:05:50.956 -05 000000057 INF: Valve A2: 49.375 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:05:50.956 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 5 to 3 15-12-21 22:05:50.956 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC3\r 15-12-21 22:05:50.957 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:05:50.957 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:05:51.100 -05 000000049 INF: ===================Frame #620=================== 15-12-21 22:05:51.101 -05 000000092 INF: ===================Frame #625=================== 15-12-21 22:05:51.253 -05 000000092 INF: ===================Frame #637=================== 15-12-21 22:05:51.431 -05 000000092 INF: ===================Frame #649=================== 15-12-21 22:05:51.565 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 3\r 15-12-21 22:05:51.566 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:51.566 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:05:51.566 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:51.582 -05 000000092 INF: ===================Frame #663=================== 15-12-21 22:05:51.733 -05 000000092 INF: ===================Frame #675=================== 15-12-21 22:05:51.864 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:05:51.878 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:05:51.878 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:51.884 -05 000000092 INF: ===================Frame #687=================== 15-12-21 22:05:51.909 -05 000000049 INF: ===================Frame #689=================== 15-12-21 22:05:51.982 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:52.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:52.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:52.039 -05 000000092 INF: ===================Frame #698=================== 15-12-21 22:05:52.059 -05 000000049 INF: ===================Frame #700=================== 15-12-21 22:05:52.106 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:05:52.130 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:05:52.130 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:52.238 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:52.238 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:05:52.239 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:05:52.239 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:52.313 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:52.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:52.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:52.326 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 3, aspirate port PortB, aspiration rate 750, dispense rate 2500, volume 75, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:05:52.413 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:05:52.424 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:52.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:52.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:52.501 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 22:05:52.501 -05 000000057 INF: Current Position of Pump is: 23040 15-12-21 22:05:52.502 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB=================== 15-12-21 22:05:52.567 -05 000000049 INF: ===================Frame #741=================== 15-12-21 22:05:52.601 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V2400s231P14400R\r 15-12-21 22:05:52.667 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:05:52.673 -05 000000092 INF: ===================Frame #749=================== 15-12-21 22:05:52.688 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:52.717 -05 000000049 INF: ===================Frame #752=================== 15-12-21 22:05:52.788 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:52.823 -05 000000092 INF: ===================Frame #761=================== 15-12-21 22:05:52.877 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:52.955 -05 000000049 INF: ===================Frame #771=================== 15-12-21 22:05:52.973 -05 000000092 INF: ===================Frame #773=================== 15-12-21 22:05:53.106 -05 000000049 INF: ===================Frame #783=================== 15-12-21 22:05:53.123 -05 000000092 INF: ===================Frame #785=================== 15-12-21 22:05:53.127 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:53.187 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:53.257 -05 000000049 INF: ===================Frame #795=================== 15-12-21 22:05:53.273 -05 000000092 INF: ===================Frame #796=================== 15-12-21 22:05:53.407 -05 000000049 INF: ===================Frame #807=================== 15-12-21 22:05:53.437 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:53.500 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:53.540 -05 000000092 INF: ===================Frame #817=================== 15-12-21 22:05:53.558 -05 000000049 INF: ===================Frame #819=================== 15-12-21 22:05:53.691 -05 000000092 INF: ===================Frame #829=================== 15-12-21 22:05:53.708 -05 000000049 INF: ===================Frame #831=================== 15-12-21 22:05:53.731 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:53.750 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:53.752 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:53.752 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:53.813 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:53.841 -05 000000092 INF: ===================Frame #841=================== 15-12-21 22:05:53.858 -05 000000049 INF: ===================Frame #843=================== 15-12-21 22:05:53.862 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:53.875 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:53.875 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:53.982 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:53.991 -05 000000092 INF: ===================Frame #853=================== 15-12-21 22:05:53.999 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.995C:A1\r\n 15-12-21 22:05:53.999 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:54.008 -05 000000049 INF: ===================Frame #854=================== 15-12-21 22:05:54.063 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:54.108 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:54.124 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:54.125 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:54.125 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:54.141 -05 000000092 INF: ===================Frame #865=================== 15-12-21 22:05:54.290 -05 000000049 INF: ===================Frame #877=================== 15-12-21 22:05:54.291 -05 000000092 INF: ===================Frame #877=================== 15-12-21 22:05:54.374 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:54.435 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:54.441 -05 000000092 INF: ===================Frame #889=================== 15-12-21 22:05:54.441 -05 000000049 INF: ===================Frame #889=================== 15-12-21 22:05:54.591 -05 000000092 INF: ===================Frame #901=================== 15-12-21 22:05:54.591 -05 000000049 INF: ===================Frame #901=================== 15-12-21 22:05:54.685 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:54.741 -05 000000092 INF: ===================Frame #912=================== 15-12-21 22:05:54.742 -05 000000049 INF: ===================Frame #913=================== 15-12-21 22:05:54.747 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:54.879 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:05:54.892 -05 000000049 INF: ===================Frame #924=================== 15-12-21 22:05:54.935 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 46.772C:A1\r\n 15-12-21 22:05:54.935 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:54.997 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:55.016 -05 000000092 INF: ===================Frame #934=================== 15-12-21 22:05:55.061 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:55.119 -05 000000049 INF: ===================Frame #942=================== 15-12-21 22:05:55.198 -05 000000092 INF: ===================Frame #949=================== 15-12-21 22:05:55.290 -05 000000049 INF: ===================Frame #956=================== 15-12-21 22:05:55.311 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:55.349 -05 000000092 INF: ===================Frame #960=================== 15-12-21 22:05:55.351 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:55.371 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:55.372 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:55.372 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:55.462 -05 000000049 INF: ===================Frame #969=================== 15-12-21 22:05:55.474 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:55.496 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:55.496 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:55.534 -05 000000092 INF: ===================Frame #975=================== 15-12-21 22:05:55.595 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:55.612 -05 000000049 INF: ===================Frame #981=================== 15-12-21 22:05:55.621 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:55.622 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:55.622 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:55.683 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:55.684 -05 000000092 INF: ===================Frame #987=================== 15-12-21 22:05:55.765 -05 000000049 INF: ===================Frame #993=================== 15-12-21 22:05:55.834 -05 000000092 INF: ===================Frame #999=================== 15-12-21 22:05:55.915 -05 000000049 INF: ===================Frame #1005=================== 15-12-21 22:05:55.933 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:55.984 -05 000000092 INF: ===================Frame #1011=================== 15-12-21 22:05:55.997 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:56.019 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:05:56.059 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 22:05:56.059 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:56.066 -05 000000049 INF: ===================Frame #1017=================== 15-12-21 22:05:56.135 -05 000000092 INF: ===================Frame #1023=================== 15-12-21 22:05:56.216 -05 000000049 INF: ===================Frame #1029=================== 15-12-21 22:05:56.247 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:56.285 -05 000000092 INF: ===================Frame #1035=================== 15-12-21 22:05:56.308 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:56.367 -05 000000049 INF: ===================Frame #1041=================== 15-12-21 22:05:56.436 -05 000000092 INF: ===================Frame #1046=================== 15-12-21 22:05:56.517 -05 000000049 INF: ===================Frame #1053=================== 15-12-21 22:05:56.558 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:56.618 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:56.667 -05 000000049 INF: ===================Frame #1065=================== 15-12-21 22:05:56.673 -05 000000092 INF: ===================Frame #1065=================== 15-12-21 22:05:56.818 -05 000000049 INF: ===================Frame #1077=================== 15-12-21 22:05:56.823 -05 000000092 INF: ===================Frame #1077=================== 15-12-21 22:05:56.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:56.868 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:56.871 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:56.871 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:56.932 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:56.968 -05 000000049 INF: ===================Frame #1089=================== 15-12-21 22:05:56.970 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:56.973 -05 000000092 INF: ===================Frame #1089=================== 15-12-21 22:05:56.994 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:56.994 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:57.093 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:57.118 -05 000000049 INF: ===================Frame #1100=================== 15-12-21 22:05:57.123 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:57.123 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:57.123 -05 000000092 INF: ===================Frame #1101=================== 15-12-21 22:05:57.182 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:57.245 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:57.273 -05 000000092 INF: ===================Frame #1113=================== 15-12-21 22:05:57.424 -05 000000049 INF: ===================Frame #1124=================== 15-12-21 22:05:57.424 -05 000000092 INF: ===================Frame #1125=================== 15-12-21 22:05:57.495 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:57.554 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:57.574 -05 000000092 INF: ===================Frame #1136=================== 15-12-21 22:05:57.601 -05 000000049 INF: ===================Frame #1139=================== 15-12-21 22:05:57.751 -05 000000049 INF: ===================Frame #1150=================== 15-12-21 22:05:57.804 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:57.814 -05 000000092 INF: ===================Frame #1155=================== 15-12-21 22:05:57.866 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:57.925 -05 000000049 INF: ===================Frame #1164=================== 15-12-21 22:05:57.964 -05 000000092 INF: ===================Frame #1167=================== 15-12-21 22:05:58.092 -05 000000049 INF: ===================Frame #1177=================== 15-12-21 22:05:58.114 -05 000000092 INF: ===================Frame #1179=================== 15-12-21 22:05:58.116 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:58.179 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:58.243 -05 000000049 INF: ===================Frame #1189=================== 15-12-21 22:05:58.264 -05 000000092 INF: ===================Frame #1191=================== 15-12-21 22:05:58.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:58.368 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:58.368 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:58.394 -05 000000049 INF: ===================Frame #1201=================== 15-12-21 22:05:58.414 -05 000000092 INF: ===================Frame #1203=================== 15-12-21 22:05:58.429 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:58.476 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:05:58.490 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:58.491 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:58.491 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:58.544 -05 000000049 INF: ===================Frame #1213=================== 15-12-21 22:05:58.564 -05 000000092 INF: ===================Frame #1215=================== 15-12-21 22:05:58.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:05:58.616 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:05:58.616 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:58.694 -05 000000049 INF: ===================Frame #1225=================== 15-12-21 22:05:58.714 -05 000000092 INF: ===================Frame #1227=================== 15-12-21 22:05:58.740 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:58.802 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:58.844 -05 000000049 INF: ===================Frame #1237=================== 15-12-21 22:05:58.864 -05 000000092 INF: ===================Frame #1238=================== 15-12-21 22:05:58.994 -05 000000049 INF: ===================Frame #1249=================== 15-12-21 22:05:59.052 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:59.056 -05 000000037 INF: FPGA: Recv TDIYWAIT 15-12-21 22:05:59.056 -05 000000009 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:05:59.058 -05 000000009 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:05:59.060 -05 000000087 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:05:59.063 -05 000000043 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:05:59.063 -05 000000087 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:05:59.063 -05 000000087 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:05:59.063 -05 000000087 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:05:59.065 -05 000000087 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:05:59.066 -05 000000043 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:05:59.066 -05 000000043 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:05:59.066 -05 000000043 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:05:59.067 -05 000000043 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:05:59.108 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:05:59.115 -05 000000092 INF: ===================Frame #1250=================== 15-12-21 22:05:59.115 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:59.116 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.976C:A1\r\n 15-12-21 22:05:59.116 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:59.126 -05 000000092 INF: Camera complete - got 1250 frames. 15-12-21 22:05:59.127 -05 000000092 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:05:59.240 -05 000000036 INF: FPGA: Recv EX1MV 15-12-21 22:05:59.240 -05 000000087 INF: Excitation Filter 1: Moved 36 steps in 177.4336 ms 15-12-21 22:05:59.241 -05 000000087 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 177.5719 ms 15-12-21 22:05:59.241 -05 000000087 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 177.7007 ms 15-12-21 22:05:59.242 -05 000000087 INF: ====================================== 15-12-21 22:05:59.251 -05 000000049 INF: ===================Frame #1250=================== 15-12-21 22:05:59.251 -05 000000092 INF: ===================Camera TDI=================== 15-12-21 22:05:59.275 -05 000000092 INF: ====================================== 15-12-21 22:05:59.365 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:59.410 -05 000000049 INF: Camera complete - got 1250 frames. 15-12-21 22:05:59.475 -05 000000092 INF: FPGA: Recv EX2MV 15-12-21 22:05:59.475 -05 000000043 INF: Excitation Filter 2: Moved 107 steps in 409.1778 ms 15-12-21 22:05:59.475 -05 000000043 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 409.3141 ms 15-12-21 22:05:59.475 -05 000000043 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 409.6138 ms 15-12-21 22:05:59.476 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:05:59.476 -05 000000043 INF: ====================================== 15-12-21 22:05:59.476 -05 000000049 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:05:59.476 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:05:59.479 -05 000000009 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:05:59.481 -05 000000009 INF: ====================================== 15-12-21 22:05:59.576 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:05:59.661 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 22:05:59.661 -05 000000057 INF: Current Position of Pump is: 37440 15-12-21 22:05:59.661 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:05:59.690 -05 000000049 INF: ===================Camera TDI=================== 15-12-21 22:05:59.714 -05 000000049 INF: ====================================== 15-12-21 22:05:59.716 -05 000000081 INF: ===================Camera TDI=================== 15-12-21 22:05:59.720 -05 000000081 INF: ====================================== 15-12-21 22:05:59.725 -05 000000065 INF: Y Motor: Moved to 9.0764 after 16862 ms 15-12-21 22:05:59.726 -05 000000065 INF: ====================================== 15-12-21 22:05:59.728 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:59.731 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:05:59.733 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:05:59.733 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:05:59.761 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:05:59.786 -05 000000058 INF: FPGA: Recv TDICLINES 9585 15-12-21 22:05:59.786 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:05:59.858 -05 000000061 INF: FPGA: Recv TDIYERD 907646 15-12-21 22:05:59.858 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:05:59.859 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:05:59.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:05:59.910 -05 000000081 INF: FPGA: Recv ZADCR 24006 15-12-21 22:05:59.910 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.092. Y moved -60.304 mm 15-12-21 22:05:59.910 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:05:59.928 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:05:59.928 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:05:59.959 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:05:59.972 -05 000000045 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:05:59.972 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:05:59.972 -05 000000062 INF: TDIScan finished after 21967.7661 ms 15-12-21 22:05:59.972 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:05:59.972 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:05:59.975 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:00.007 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.910 um 15-12-21 22:06:00.008 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:00.017 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:00.019 -05 000000048 INF: ===================Dither Clean Up Command=================== 15-12-21 22:06:00.021 -05 000000043 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:06:00.023 -05 000000043 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:06:00.024 -05 000000082 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:06:00.024 -05 000000025 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:06:00.024 -05 000000082 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:06:00.024 -05 000000082 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:06:00.032 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:00.032 -05 000000064 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:06:00.036 -05 000000064 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:06:00.043 -05 000000022 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:06:00.047 -05 000000023 INF: FPGA: Recv ZSTEP 15-12-21 22:06:00.048 -05 000000082 INF: ====================================== 15-12-21 22:06:00.048 -05 000000022 INF: ===================LFT:Extracting coords=================== 15-12-21 22:06:00.049 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:00.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:00.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:00.080 -05 000000022 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:06:00.081 -05 000000022 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:06:00.087 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:00.088 -05 000000063 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:06:00.090 -05 000000047 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:00.090 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:00.093 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:00.093 -05 000000068 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:06:00.093 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:06:00.093 -05 000000047 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:06:00.096 -05 000000023 INF: FPGA: Recv ZSEL 15-12-21 22:06:00.096 -05 000000064 INF: FPGA: Xmit ZDACW 31368\n 15-12-21 22:06:00.097 -05 000000043 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:06:00.098 -05 000000043 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:06:00.098 -05 000000025 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:06:00.098 -05 000000043 INF: ====================================== 15-12-21 22:06:00.161 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:00.162 -05 000000025 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:06:00.163 -05 000000028 INF: FPGA: Recv ZDACW 15-12-21 22:06:00.163 -05 000000025 INF: ====================================== 15-12-21 22:06:00.164 -05 000000064 INF: ====================================== 15-12-21 22:06:00.178 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 42.626C:A1\r\n 15-12-21 22:06:00.178 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:00.260 -05 000000068 INF: LFT found best fwhm score 2.552372 in 124 ms 15-12-21 22:06:00.260 -05 000000068 INF: LFT found good score at index 8173 with fwhm value 2.552372. Next cycle, cycle 36 starting Z position for bottom surface is at -0.098 mm FC:B, C:35,L:2,B 15-12-21 22:06:00.260 -05 000000037 INF: LFT found best fwhm score 2.518362 in 124 ms 15-12-21 22:06:00.260 -05 000000037 INF: LFT found good score at index 6977 with fwhm value 2.518362. Next cycle, cycle 36 starting Z position for bottom surface is at -0.099 mm FC:B, C:35,L:2,B 15-12-21 22:06:00.260 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:00.261 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:00.261 -05 000000068 INF: ====================================== 15-12-21 22:06:00.261 -05 000000037 INF: ====================================== 15-12-21 22:06:00.261 -05 000000063 INF: LFT found best fwhm score 2.476915 in 126 ms 15-12-21 22:06:00.261 -05 000000063 INF: LFT found good score at index 3457 with fwhm value 2.476915. Next cycle, cycle 36 starting Z position for bottom surface is at -0.100 mm FC:B, C:35,L:2,B 15-12-21 22:06:00.261 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:00.262 -05 000000063 INF: ====================================== 15-12-21 22:06:00.264 -05 000000047 INF: LFT found best fwhm score 2.253946 in 128 ms 15-12-21 22:06:00.264 -05 000000047 INF: LFT found good score at index 8881 with fwhm value 2.253946. Next cycle, cycle 36 starting Z position for bottom surface is at -0.098 mm FC:B, C:35,L:2,B 15-12-21 22:06:00.268 -05 000000047 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:00.268 -05 000000047 INF: ====================================== 15-12-21 22:06:00.269 -05 000000022 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:06:00.271 -05 000000022 INF: LFT weighted average best Z for bottom surface is at -0.098mm FC:B, C:35,L:2,B 15-12-21 22:06:00.275 -05 000000022 INF: ====================================== 15-12-21 22:06:00.276 -05 000000048 INF: ====================================== 15-12-21 22:06:00.281 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:00.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:00.288 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:06:00.288 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:00.288 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:06:00.288 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:00.289 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:06:00.289 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:00.289 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:06:00.289 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:00.290 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:06:00.290 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:06:00.291 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Waiting for image analysis=================== 15-12-21 22:06:00.292 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:06:00.292 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:06:00.292 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:06:00.292 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:06:00.292 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:06:00.292 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:06:00.293 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:06:00.297 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:06:00.298 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:06:00.300 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:00.301 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging, Bottom Surface=================== 15-12-21 22:06:00.302 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging=================== 15-12-21 22:06:00.302 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging=================== 15-12-21 22:06:00.303 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging=================== 15-12-21 22:06:00.305 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:00.305 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:00.306 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35, Imaging=================== 15-12-21 22:06:00.311 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #35=================== 15-12-21 22:06:00.312 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX)=================== 15-12-21 22:06:00.473 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:00.474 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:00.474 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:06:00.549 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:06:00.613 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:06:00.613 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:00.616 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36=================== 15-12-21 22:06:00.617 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle=================== 15-12-21 22:06:00.618 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:00.618 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:00.619 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:00.619 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:00.673 -05 000000066 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203=================== 15-12-21 22:06:00.673 -05 000000038 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204=================== 15-12-21 22:06:00.673 -05 000000011 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204=================== 15-12-21 22:06:00.673 -05 000000077 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205=================== 15-12-21 22:06:00.673 -05 000000040 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206=================== 15-12-21 22:06:00.674 -05 000000051 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2207=================== 15-12-21 22:06:00.674 -05 000000027 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2207, Registering and Extracting C035 L002 T2208=================== 15-12-21 22:06:00.675 -05 000000060 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203=================== 15-12-21 22:06:00.742 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:06:00.744 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:00.744 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Selecting Reagent USB (5)=================== 15-12-21 22:06:00.744 -05 000000062 INF: Valve B2: Go to position 5 15-12-21 22:06:00.744 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:06:00.748 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:06:00.748 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:00.801 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 3\r 15-12-21 22:06:00.801 -05 000000062 INF: Valve B2: 212.709 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:06:00.801 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 3 to 5 15-12-21 22:06:00.801 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW5\r 15-12-21 22:06:00.802 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:06:00.802 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:06:00.859 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:06:00.927 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:06:00.927 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:01.068 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:01.068 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:01.073 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:01.073 -05 000000057 INF: WaitCommand(5000) start 15-12-21 22:06:01.073 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 22:06:01.165 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:01.190 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:06:01.190 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:01.378 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 22:06:01.378 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:01.378 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:06:01.379 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:01.448 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:06:01.448 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:01.871 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:01.893 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:06:01.893 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:02.034 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:02.035 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:02.035 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 22:06:02.035 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:02.074 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:02.074 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:06:02.103 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:02.104 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:02.104 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:02.111 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:06:02.204 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:06:02.226 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:02.283 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:06:02.283 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 22:06:02.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:02.284 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:06:02.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:02.383 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P7680R\r 15-12-21 22:06:02.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:02.410 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:02.410 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:02.474 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:02.575 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:02.657 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:02.907 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:02.970 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:03.074 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:03.075 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 22:06:03.220 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:03.284 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:03.535 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:03.594 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:03.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:03.718 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:03.718 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:03.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:03.844 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:03.848 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:03.849 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:03.907 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:03.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:03.968 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:03.968 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:04.056 -05 000000066 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2207=================== 15-12-21 22:06:04.075 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:04.076 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 22:06:04.112 -05 000000038 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2207=================== 15-12-21 22:06:04.113 -05 000000088 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2207=================== 15-12-21 22:06:04.159 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:04.184 -05 000000040 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206=================== 15-12-21 22:06:04.212 -05 000000031 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210, Registering and Extracting C035 L002 T2211=================== 15-12-21 22:06:04.213 -05 000000072 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210, Registering and Extracting C035 L002 T2211=================== 15-12-21 22:06:04.220 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:04.227 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:04.242 -05 000000077 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210=================== 15-12-21 22:06:04.282 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.976C:A1\r\n 15-12-21 22:06:04.282 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:04.313 -05 000000044 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210, Registering and Extracting C035 L002 T2212=================== 15-12-21 22:06:04.470 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:04.531 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:04.531 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 22:06:04.624 -05 000000060 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210=================== 15-12-21 22:06:04.631 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:06:04.713 -05 000000020 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210, Registering and Extracting C035 L002 T2213=================== 15-12-21 22:06:04.715 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 22:06:04.715 -05 000000062 INF: Current Position of Pump is: 7680 15-12-21 22:06:04.715 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:06:04.815 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:06:04.905 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:05.005 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:05.028 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:05.077 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:05.077 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 22:06:05.090 -05 000000011 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210=================== 15-12-21 22:06:05.115 -05 000000034 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210, Registering and Extracting C035 L002 T2214=================== 15-12-21 22:06:05.196 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:05.217 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:05.217 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:05.278 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:05.330 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:05.337 -05 000000051 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210=================== 15-12-21 22:06:05.352 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:05.363 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:05.364 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 38.889C:A1\r\n 15-12-21 22:06:05.364 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:05.364 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:06:05.413 -05 000000033 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210, Registering and Extracting C035 L002 T2215=================== 15-12-21 22:06:05.415 -05 000000027 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210=================== 15-12-21 22:06:05.500 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:05.547 -05 000000056 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210, Registering and Extracting C035 L002 T2216=================== 15-12-21 22:06:05.611 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:05.620 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:05.729 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:05.794 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:06:05.794 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:05.910 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:05.979 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:05.979 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:06.076 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:06.077 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:06.077 -05 000000057 INF: WaitCommand(5000) end 15-12-21 22:06:06.077 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:06.079 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:06.080 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:06.120 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:06:06.121 -05 000000023 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:06:06.121 -05 000000078 INF: ===================WaitCommand=================== 15-12-21 22:06:06.122 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:06.122 -05 000000078 INF: WaitCommand(10000) start 15-12-21 22:06:06.122 -05 000000078 INF: ===================Delay 10 of 10 seconds left=================== 15-12-21 22:06:06.183 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:06.184 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:06:06.184 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:06.283 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:06.285 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:06.308 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:06:06.308 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:06.369 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:06.420 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:06.421 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:06.421 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:06.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:06.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:06:06.424 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:06:06.468 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°, FC temperature to 60°=================== 15-12-21 22:06:06.469 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:06:06.470 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:06:06.470 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:06.527 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 22:06:06.527 -05 000000023 INF: Current Position of Pump is: 37440 15-12-21 22:06:06.527 -05 000000023 INF: Dispense Steps 48000 is greater than steps to home syringe 37440, reducing number of steps to 37440 15-12-21 22:06:06.527 -05 000000023 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:06:06.582 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:60.00\r 15-12-21 22:06:06.627 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD37440R\r 15-12-21 22:06:06.652 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:06:06.652 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:06.716 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:06.776 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 22:06:06.836 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:06.841 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:06:06.841 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:06.901 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:06.980 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:06:06.981 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:06:06.982 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:06:06.984 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:06:07.016 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:07.016 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:07.027 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:06:07.028 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:07.088 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:07.088 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Selecting Reagent CRM (7)=================== 15-12-21 22:06:07.088 -05 000000062 INF: Valve B2: Go to position 7 15-12-21 22:06:07.088 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:06:07.138 -05 000000078 INF: ===================Delay 9 of 10 seconds left=================== 15-12-21 22:06:07.160 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 22:06:07.160 -05 000000062 INF: Valve B2: 6.358 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:06:07.160 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 5 to 7 15-12-21 22:06:07.160 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW7\r 15-12-21 22:06:07.161 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:06:07.161 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:06:07.189 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:07.275 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:07.296 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:07.338 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:07.338 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:07.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:07.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:07.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:07.525 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:07.588 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:07.630 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:07.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:07.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:07.712 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 7\r 15-12-21 22:06:07.712 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:07.713 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:06:07.762 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:07.775 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:06:07.775 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:07.838 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:07.886 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:06:07.898 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:07.903 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:06:07.903 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:07.915 -05 000000088 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206, Registering and Extracting C035 L002 T2210=================== 15-12-21 22:06:08.008 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:08.086 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:06:08.086 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:08.138 -05 000000078 INF: ===================Delay 8 of 10 seconds left=================== 15-12-21 22:06:08.151 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:08.191 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:08.191 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 22:06:08.191 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:08.212 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:08.231 -05 000000072 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205, Registering and Extracting C035 L002 T2206=================== 15-12-21 22:06:08.275 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:08.288 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 7, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:06:08.375 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:06:08.385 -05 000000044 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204, Registering and Extracting C035 L002 T2205=================== 15-12-21 22:06:08.462 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:08.462 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 22:06:08.462 -05 000000062 INF: Current Position of Pump is: 7680 15-12-21 22:06:08.463 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7), Aspirating port PortB=================== 15-12-21 22:06:08.523 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:08.563 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P21120R\r 15-12-21 22:06:08.578 -05 000000031 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203, Registering and Extracting C035 L002 T2204=================== 15-12-21 22:06:08.646 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:08.699 -05 000000020 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202, Registering and Extracting C035 L002 T2203=================== 15-12-21 22:06:08.746 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:08.773 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:08.840 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:08.842 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:08.942 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:08.959 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:08.959 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:09.036 -05 000000034 INF: ===================Registering and Extracting C035 L002 T2201, Registering and Extracting C035 L002 T2202=================== 15-12-21 22:06:09.059 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:09.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:09.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:09.090 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:09.092 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:09.139 -05 000000078 INF: ===================Delay 7 of 10 seconds left=================== 15-12-21 22:06:09.147 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:09.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:09.209 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:09.210 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:09.210 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:09.324 -05 000000056 INF: ===================Registering and Extracting C035 L002 T2201=================== 15-12-21 22:06:09.350 -05 000000033 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:06:09.387 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:06:09.393 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:06:09.397 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:09.401 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:09.459 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:09.460 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:09.461 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 23.976C:A1\r\n 15-12-21 22:06:09.461 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:09.503 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:06:09.508 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:06:09.522 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:09.634 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:06:09.644 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:06:09.710 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:09.770 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:09.772 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:09.774 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:06:09.779 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:06:09.832 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:09.875 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:06:10.020 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:10.082 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:10.083 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:10.139 -05 000000078 INF: ===================Delay 6 of 10 seconds left=================== 15-12-21 22:06:10.144 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:10.333 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:10.394 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:10.394 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:10.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:10.457 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:10.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:10.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:10.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:10.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:10.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:10.644 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:10.692 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:10.700 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:06:10.710 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:10.710 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:10.712 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 35.459C:A1\r\n 15-12-21 22:06:10.712 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:10.768 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:10.817 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:10.831 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:10.831 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:10.960 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:11.018 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:11.022 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:11.080 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:11.140 -05 000000078 INF: ===================Delay 5 of 10 seconds left=================== 15-12-21 22:06:11.272 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:11.330 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:11.333 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:11.393 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:11.582 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:11.583 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:11.643 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:11.645 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:06:11.645 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:11.646 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:11.706 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:11.706 -05 000000023 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:06:11.706 -05 000000023 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:06:11.807 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:06:11.893 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:11.897 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:11.955 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:11.993 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:12.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:12.081 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:12.082 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:12.082 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:12.142 -05 000000078 INF: ===================Delay 4 of 10 seconds left=================== 15-12-21 22:06:12.189 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:12.205 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:12.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:12.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:12.266 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:12.309 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:12.331 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:06:12.332 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:12.332 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:12.393 -05 000000023 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:12.394 -05 000000023 INF: ====================================== 15-12-21 22:06:12.516 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:12.646 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:12.896 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:12.953 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:13.142 -05 000000078 INF: ===================Delay 3 of 10 seconds left=================== 15-12-21 22:06:13.203 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:13.266 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:13.516 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:13.577 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:13.615 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:13.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:13.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:13.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:13.767 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:13.767 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:13.827 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:13.865 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:13.889 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:13.890 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:13.890 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:14.139 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:14.142 -05 000000078 INF: ===================Delay 2 of 10 seconds left=================== 15-12-21 22:06:14.203 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:14.453 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:14.514 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:14.571 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:14.639 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 31.462C:A1\r\n 15-12-21 22:06:14.639 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:14.764 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:14.825 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:15.075 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:15.113 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:15.137 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:15.138 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:15.138 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:15.143 -05 000000078 INF: ===================Delay 1 of 10 seconds left=================== 15-12-21 22:06:15.237 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:15.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:15.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:15.362 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:15.387 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:15.390 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:15.390 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:15.450 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:15.700 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:15.763 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:15.818 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:15.887 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 32.416C:A1\r\n 15-12-21 22:06:15.887 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:16.013 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:16.073 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:16.074 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 22:06:16.124 -05 000000078 INF: ===================WaitCommand=================== 15-12-21 22:06:16.124 -05 000000078 INF: WaitCommand(10000) end 15-12-21 22:06:16.124 -05 000000078 INF: ====================================== 15-12-21 22:06:16.127 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:16.128 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:16.130 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:06:16.131 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Chemistry CompleteCycle=================== 15-12-21 22:06:16.132 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39=================== 15-12-21 22:06:16.173 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:06:16.287 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 22:06:16.287 -05 000000062 INF: Current Position of Pump is: 28800 15-12-21 22:06:16.287 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:06:16.288 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.288 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Waiting for imaging module...=================== 15-12-21 22:06:16.288 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.288 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Waiting for analysis...=================== 15-12-21 22:06:16.289 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.289 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Waiting for user to shut the door...=================== 15-12-21 22:06:16.289 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.289 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.290 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Waiting for imaging module...=================== 15-12-21 22:06:16.290 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.290 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Waiting for analysis...=================== 15-12-21 22:06:16.290 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.290 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Waiting for user to shut the door...=================== 15-12-21 22:06:16.290 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.291 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.291 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:06:16.292 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface=================== 15-12-21 22:06:16.292 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface=================== 15-12-21 22:06:16.292 -05 000000057 INF: Compensator: Moving IntoPath 15-12-21 22:06:16.292 -05 000000057 INF: FPGA: Xmit MIOCOMPF\n 15-12-21 22:06:16.387 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:06:16.465 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:16.565 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:16.628 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:16.629 -05 000000037 INF: FPGA: Recv MIOCOMPF 15-12-21 22:06:16.629 -05 000000057 INF: Compensator: Moved IntoPath in 337 ms 15-12-21 22:06:16.630 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface=================== 15-12-21 22:06:16.633 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface=================== 15-12-21 22:06:16.633 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Aligning=================== 15-12-21 22:06:16.634 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Aligning=================== 15-12-21 22:06:16.639 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Aligning=================== 15-12-21 22:06:16.640 -05 000000047 INF: ===================Move Tilt Motor 1=================== 15-12-21 22:06:16.640 -05 000000084 INF: ===================Move Tilt Motor 2=================== 15-12-21 22:06:16.640 -05 000000029 INF: ===================Move Tilt Motor 3=================== 15-12-21 22:06:16.640 -05 000000047 INF: Tilt Motor 1: Moving to 5.5260 mm, started at 5.3614 mm, delta = 0.1646 mm 15-12-21 22:06:16.640 -05 000000047 INF: FPGA: Xmit T1RD\n 15-12-21 22:06:16.640 -05 000000029 INF: Tilt Motor 3: Moving to 5.4099 mm, started at 5.5743 mm, delta = -0.1643 mm 15-12-21 22:06:16.641 -05 000000084 INF: Tilt Motor 2: Moving to 5.3736 mm, started at 5.5075 mm, delta = -0.1339 mm 15-12-21 22:06:16.647 -05 000000029 INF: FPGA: Xmit T3RD\n 15-12-21 22:06:16.649 -05 000000084 INF: FPGA: Xmit T2RD\n 15-12-21 22:06:16.651 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:16.652 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:16.652 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:16.686 -05 000000043 INF: FPGA: Recv T1RD 21108 15-12-21 22:06:16.686 -05 000000043 INF: FPGA: Recv T3RD 21944 15-12-21 22:06:16.686 -05 000000043 INF: FPGA: Recv T2RD 21683 15-12-21 22:06:16.686 -05 000000029 INF: Tilt Motor 3: Encoder: at motor step 3657 + 2/6 15-12-21 22:06:16.687 -05 000000047 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 22:06:16.687 -05 000000047 INF: Tilt Motor 1: Moving to 21756 encoder counts 15-12-21 22:06:16.687 -05 000000084 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 22:06:16.687 -05 000000084 INF: Tilt Motor 2: Moving to 21156 encoder counts 15-12-21 22:06:16.687 -05 000000047 INF: FPGA: Xmit T1MOVETO 21756\n 15-12-21 22:06:16.687 -05 000000029 INF: Tilt Motor 3: Moving to 21299 encoder counts 15-12-21 22:06:16.688 -05 000000029 INF: FPGA: Xmit T3MOVETO 21299\n 15-12-21 22:06:16.689 -05 000000084 INF: FPGA: Xmit T2MOVETO 21156\n 15-12-21 22:06:16.750 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:16.778 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:16.778 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:16.876 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:16.901 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:16.901 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 22:06:16.901 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:16.938 -05 000000041 INF: FPGA: Recv T2MOVETO 87 15-12-21 22:06:16.938 -05 000000041 INF: FPGA: Recv T1MOVETO 107 15-12-21 22:06:16.938 -05 000000041 INF: FPGA: Recv T3MOVETO 108 15-12-21 22:06:16.938 -05 000000029 INF: Tilt Motor 3: To move from 5.574 to 5.410 (-0.164 mm) should take 108 steps, but required 108 steps (0.165 mm). Slippage = 0.000 mm (0.00%) 15-12-21 22:06:16.939 -05 000000084 INF: Tilt Motor 2: To move from 5.507 to 5.374 (-0.134 mm) should take 88 steps, but required 87 steps (0.133 mm). Slippage = -0.002 mm (0.01%) 15-12-21 22:06:16.939 -05 000000029 INF: FPGA: Xmit T3RD\n 15-12-21 22:06:16.939 -05 000000047 INF: Tilt Motor 1: To move from 5.361 to 5.526 (0.165 mm) should take 108 steps, but required 107 steps (0.163 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 22:06:16.941 -05 000000047 INF: FPGA: Xmit T1RD\n 15-12-21 22:06:16.942 -05 000000084 INF: FPGA: Xmit T2RD\n 15-12-21 22:06:16.962 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:16.962 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:16.963 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:06:17.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:17.005 -05 000000049 INF: FPGA: Recv T3RD 21300 15-12-21 22:06:17.005 -05 000000049 INF: FPGA: Recv T1RD 21750 15-12-21 22:06:17.006 -05 000000049 INF: FPGA: Recv T2RD 21162 15-12-21 22:06:17.006 -05 000000047 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 22:06:17.006 -05 000000047 INF: FPGA: Xmit T1RD\n 15-12-21 22:06:17.006 -05 000000084 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 22:06:17.006 -05 000000029 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 22:06:17.008 -05 000000084 INF: FPGA: Xmit T2RD\n 15-12-21 22:06:17.010 -05 000000029 INF: FPGA: Xmit T3RD\n 15-12-21 22:06:17.027 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:17.027 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:17.063 -05 000000082 INF: FPGA: Recv T1RD 21750 15-12-21 22:06:17.063 -05 000000082 INF: FPGA: Recv T2RD 21162 15-12-21 22:06:17.063 -05 000000082 INF: FPGA: Recv T3RD 21300 15-12-21 22:06:17.063 -05 000000084 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 22:06:17.063 -05 000000084 INF: FPGA: Xmit T2RD\n 15-12-21 22:06:17.063 -05 000000047 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 22:06:17.063 -05 000000029 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 22:06:17.065 -05 000000047 INF: FPGA: Xmit T1RD\n 15-12-21 22:06:17.066 -05 000000029 INF: FPGA: Xmit T3RD\n 15-12-21 22:06:17.128 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:17.130 -05 000000037 INF: FPGA: Recv T2RD 21162 15-12-21 22:06:17.130 -05 000000037 INF: FPGA: Recv T1RD 21750 15-12-21 22:06:17.130 -05 000000037 INF: FPGA: Recv T3RD 21300 15-12-21 22:06:17.130 -05 000000047 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 22:06:17.130 -05 000000047 INF: Tilt Motor 1: After move to 5.5260, error = -0.0015, min/max error = -0.0015/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:06:17.131 -05 000000047 INF: Tilt Motor 1: Moved to 5.5245 after 490.5202 ms 15-12-21 22:06:17.131 -05 000000084 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 22:06:17.131 -05 000000084 INF: Tilt Motor 2: After move to 5.3736, error = 0.0015, min/max error = -0.0015/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:06:17.131 -05 000000084 INF: Tilt Motor 2: Moved to 5.3751 after 490.0215 ms 15-12-21 22:06:17.131 -05 000000029 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 22:06:17.131 -05 000000084 INF: ====================================== 15-12-21 22:06:17.131 -05 000000047 INF: ====================================== 15-12-21 22:06:17.131 -05 000000029 INF: Tilt Motor 3: After move to 5.4099, error = 0.0003, min/max error = -0.0015/0.0009, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:06:17.131 -05 000000029 INF: Tilt Motor 3: Moved to 5.4102 after 491.1854 ms 15-12-21 22:06:17.132 -05 000000029 INF: ====================================== 15-12-21 22:06:17.133 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Aligning=================== 15-12-21 22:06:17.139 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Aligning=================== 15-12-21 22:06:17.144 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface=================== 15-12-21 22:06:17.144 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface=================== 15-12-21 22:06:17.152 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:06:17.152 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:17.162 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:06:17.162 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:06:17.165 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:06:17.170 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:06:17.174 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:06:17.276 -05 000000057 INF: Compensator: Remaining IntoPath 15-12-21 22:06:17.277 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:06:17.278 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:06:17.284 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:06:17.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:06:17.323 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:17.323 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:06:17.323 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:17.323 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -119.7 um, section = A_1 15-12-21 22:06:17.326 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:06:17.327 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:06:17.334 -05 000000092 INF: ===================Move X,Y=================== 15-12-21 22:06:17.335 -05 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:06:17.335 -05 000000047 INF: ===================MoveEmissionFilters=================== 15-12-21 22:06:17.336 -05 000000092 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:06:17.336 -05 000000081 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:06:17.336 -05 000000074 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:06:17.340 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:06:17.340 -05 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:06:17.341 -05 000000087 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:06:17.341 -05 000000087 INF: Z Motor: Moving to -0.1622 mm, started at -0.1197 mm 15-12-21 22:06:17.341 -05 000000087 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:06:17.341 -05 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:06:17.344 -05 000000049 INF: ===================Move X Motor without settling=================== 15-12-21 22:06:17.344 -05 000000074 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:06:17.344 -05 000000086 INF: ===================Move Y Motor without settling=================== 15-12-21 22:06:17.344 -05 000000049 INF: X Motor: Xmit PR VM\n 15-12-21 22:06:17.344 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:06:17.344 -05 000000081 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:06:17.348 -05 000000086 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:06:17.348 -05 000000086 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:06:17.351 -05 000000086 INF: Y Motor: Xmit 1G\n 15-12-21 22:06:17.351 -05 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:06:17.354 -05 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:06:17.354 -05 000000082 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:06:17.355 -05 000000063 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:06:17.359 -05 000000037 INF: ====================================== 15-12-21 22:06:17.359 -05 000000061 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:06:17.360 -05 000000023 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:06:17.360 -05 000000063 INF: ====================================== 15-12-21 22:06:17.360 -05 000000045 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:06:17.360 -05 000000061 INF: ====================================== 15-12-21 22:06:17.360 -05 000000064 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:06:17.360 -05 000000082 INF: ====================================== 15-12-21 22:06:17.360 -05 000000045 INF: ====================================== 15-12-21 22:06:17.361 -05 000000048 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:06:17.361 -05 000000064 INF: ====================================== 15-12-21 22:06:17.364 -05 000000048 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:06:17.368 -05 000000048 INF: ====================================== 15-12-21 22:06:17.368 -05 000000023 INF: ====================================== 15-12-21 22:06:17.369 -05 000000074 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:06:17.369 -05 000000081 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:06:17.372 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:06:17.372 -05 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:06:17.375 -05 000000074 INF: ====================================== 15-12-21 22:06:17.376 -05 000000081 INF: ====================================== 15-12-21 22:06:17.381 -05 000000022 INF: ====================================== 15-12-21 22:06:17.381 -05 000000055 INF: ====================================== 15-12-21 22:06:17.393 -05 000000047 INF: ====================================== 15-12-21 22:06:17.407 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:06:17.407 -05 000000041 INF: FPGA: Recv ZTRG 15-12-21 22:06:17.407 -05 000000087 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:06:17.413 -05 000000086 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:06:17.414 -05 000000049 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:06:17.415 -05 000000086 INF: Y Motor: Recv 1G\r\n 15-12-21 22:06:17.415 -05 000000049 INF: X Motor: Xmit PR VI\n 15-12-21 22:06:17.417 -05 000000086 INF: Y Motor: Xmit 1D\n 15-12-21 22:06:17.462 -05 000000086 INF: Y Motor: Recv 1D\r\n 15-12-21 22:06:17.462 -05 000000048 INF: FPGA: Recv ZYT 15-12-21 22:06:17.465 -05 000000087 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:06:17.465 -05 000000049 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:06:17.465 -05 000000049 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:06:17.465 -05 000000049 INF: X Motor: Moving to 12.8720 mm @15.000 mm/sec, started at 81.0288 mm 15-12-21 22:06:17.468 -05 000000087 INF: FPGA: Xmit ZMV 42513\n 15-12-21 22:06:17.468 -05 000000086 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:06:17.468 -05 000000049 INF: X Motor: Xmit MA -18894\n 15-12-21 22:06:17.472 -05 000000086 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:06:17.474 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:06:17.474 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:17.523 -05 000000068 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 22:06:17.523 -05 000000068 INF: FPGA: Recv ZMV 15-12-21 22:06:17.523 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 22:06:17.523 -05 000000087 INF: Z Motor: MoveAndTrigger 'ZMV' command took 58.1513 ms 15-12-21 22:06:17.523 -05 000000087 INF: FPGA: Xmit ZDACR\n 15-12-21 22:06:17.527 -05 000000049 INF: X Motor: Recv MA -18894\r\n> 15-12-21 22:06:17.527 -05 000000049 INF: X Motor: WaitUntilStopped 64544 15-12-21 22:06:17.579 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:17.587 -05 000000084 INF: FPGA: Recv ZDACR 42513 15-12-21 22:06:17.587 -05 000000087 INF: Z Motor: MoveAndTrigger took 246.4833 ms w/comms 15-12-21 22:06:17.587 -05 000000087 INF: Z Motor: After move to -0.1622, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:06:17.587 -05 000000087 INF: Z Motor: MoveAbsStepped took 246.5689 ms 15-12-21 22:06:17.588 -05 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:06:17.594 -05 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:06:17.595 -05 000000074 INF: ===================TDI Scan Setup=================== 15-12-21 22:06:17.595 -05 000000024 INF: ===================Camera Arm TDI=================== 15-12-21 22:06:17.601 -05 000000074 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:17.605 -05 000000074 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:06:17.608 -05 000000074 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:06:17.608 -05 000000074 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:06:17.649 -05 000000048 INF: FPGA: Recv ZSEL 15-12-21 22:06:17.650 -05 000000074 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:06:17.650 -05 000000074 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:17.651 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:06:17.651 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:17.653 -05 000000074 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:06:17.653 -05 000000074 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:06:17.653 -05 000000074 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:06:17.710 -05 000000054 INF: FPGA: Recv ZSTEP 15-12-21 22:06:17.714 -05 000000074 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:17.716 -05 000000074 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:06:17.719 -05 000000074 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:17.721 -05 000000074 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:06:17.721 -05 000000074 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:06:17.723 -05 000000074 INF: Z Motor: Arming to move to -0.1222 mm 15-12-21 22:06:17.723 -05 000000074 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:06:17.757 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:17.758 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:17.758 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:17.759 -05 000000062 INF: WaitCommand(5000) start 15-12-21 22:06:17.759 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 22:06:17.772 -05 000000025 INF: FPGA: Recv ZYT 15-12-21 22:06:17.772 -05 000000074 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907644 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:06:17.772 -05 000000074 INF: FPGA: Xmit ZARM 32028\n 15-12-21 22:06:17.838 -05 000000009 INF: FPGA: Recv ZARM 15-12-21 22:06:17.838 -05 000000074 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 66.3378 ms 15-12-21 22:06:17.839 -05 000000074 INF: Z Motor: ArmAbsStepped took 115.582 ms 15-12-21 22:06:17.840 -05 000000074 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:17.842 -05 000000074 INF: ===================TDI Scan Setup=================== 15-12-21 22:06:17.848 -05 000000074 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:06:17.852 -05 000000074 INF: ===================TDI Scan Setup=================== 15-12-21 22:06:17.855 -05 000000074 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:06:17.856 -05 000000074 INF: ===================TDI Scan Setup=================== 15-12-21 22:06:17.863 -05 000000074 INF: ====================================== 15-12-21 22:06:18.253 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:18.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:18.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:18.381 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:18.398 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:18.398 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:18.470 -05 000000024 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:06:18.470 -05 000000024 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:06:18.470 -05 000000024 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:06:18.506 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:18.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:18.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:18.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:18.761 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 22:06:19.348 -05 000000024 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:06:19.348 -05 000000024 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:06:19.348 -05 000000024 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:06:19.350 -05 000000024 INF: ====================================== 15-12-21 22:06:19.351 -05 000000087 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:06:19.358 -05 000000087 INF: ====================================== 15-12-21 22:06:19.745 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:19.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:19.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 22:06:19.772 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:19.772 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:19.873 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:19.898 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 38.091C:A1\r\n 15-12-21 22:06:19.898 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:19.999 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:20.022 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:20.022 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:20.125 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:20.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:20.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:20.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:20.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:06:20.959 -05 000000086 INF: Y Motor: Moved to 70.6887 after 3486 ms 15-12-21 22:06:20.960 -05 000000086 INF: ====================================== 15-12-21 22:06:20.991 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:21.019 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 29.551C:A1\r\n 15-12-21 22:06:21.019 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:21.437 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:21.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:21.457 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:21.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:21.581 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:21.581 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:21.684 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:21.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:21.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:21.765 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:21.765 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:06:22.005 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:22.082 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:06:22.082 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:22.644 -05 000000049 INF: X Motor: Xmit PR ER\n 15-12-21 22:06:22.704 -05 000000049 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:06:22.704 -05 000000049 INF: X Motor: Moved to 12.8696 after 5176 ms 15-12-21 22:06:22.705 -05 000000049 INF: ====================================== 15-12-21 22:06:22.710 -05 000000092 INF: ===================Move X,Y=================== 15-12-21 22:06:22.716 -05 000000092 INF: ====================================== 15-12-21 22:06:22.721 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:06:22.726 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:22.727 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:06:22.763 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:22.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:22.764 -05 000000062 INF: WaitCommand(5000) end 15-12-21 22:06:22.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:22.766 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:22.769 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:06:22.770 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:06:22.770 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:22.771 -05 000000079 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:06:22.771 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:22.772 -05 000000078 INF: ===================WaitCommand=================== 15-12-21 22:06:22.772 -05 000000078 INF: WaitCommand(15000) start 15-12-21 22:06:22.772 -05 000000078 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:06:22.829 -05 000000037 INF: FPGA: Recv ZFREQCL 15-12-21 22:06:22.830 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:22.836 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:06:22.836 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:22.854 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:06:22.904 -05 000000009 INF: FPGA: Recv TDIYERD 7068848 15-12-21 22:06:22.904 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068848 counts (70.688 mm) 15-12-21 22:06:22.905 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:06:22.906 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:06:22.907 -05 000000049 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:06:22.908 -05 000000049 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:06:22.909 -05 000000064 INF: ===================TDI FPGA Arm=================== 15-12-21 22:06:22.910 -05 000000064 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:06:22.911 -05 000000064 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:06:22.911 -05 000000064 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:06:22.930 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:22.954 -05 000000081 INF: FPGA: Recv TDIYPOS 15-12-21 22:06:22.955 -05 000000049 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:06:22.955 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:22.955 -05 000000064 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:06:22.956 -05 000000049 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:06:22.956 -05 000000049 INF: ====================================== 15-12-21 22:06:22.959 -05 000000064 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:06:22.959 -05 000000064 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:06:22.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:23.016 -05 000000041 INF: FPGA: Recv TDIYARM3 15-12-21 22:06:23.017 -05 000000064 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:06:23.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:23.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:23.021 -05 000000064 INF: ===================TDI FPGA Arm=================== 15-12-21 22:06:23.022 -05 000000064 INF: ====================================== 15-12-21 22:06:23.025 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:06:23.028 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:23.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:23.030 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:23.033 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:23.038 -05 000000081 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:06:23.038 -05 000000037 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:06:23.038 -05 000000081 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:06:23.038 -05 000000081 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:06:23.040 -05 000000081 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:06:23.040 -05 000000081 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:06:23.040 -05 000000037 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:06:23.041 -05 000000037 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:06:23.041 -05 000000037 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:06:23.055 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:06:23.058 -05 000000037 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:06:23.120 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:23.141 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 22:06:23.141 -05 000000079 INF: Current Position of Pump is: 28800 15-12-21 22:06:23.141 -05 000000079 INF: Dispense Steps 48000 is greater than steps to home syringe 28800, reducing number of steps to 28800 15-12-21 22:06:23.141 -05 000000079 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:06:23.143 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:23.143 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:23.202 -05 000000049 INF: FPGA: Recv EX1MV 15-12-21 22:06:23.202 -05 000000037 INF: Excitation Filter 1: Moved -36 steps in 161.7405 ms 15-12-21 22:06:23.202 -05 000000037 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 161.8242 ms 15-12-21 22:06:23.202 -05 000000037 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 161.9632 ms 15-12-21 22:06:23.203 -05 000000037 INF: ====================================== 15-12-21 22:06:23.241 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD28800R\r 15-12-21 22:06:23.247 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:23.266 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:23.266 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:23.329 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:23.429 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:23.453 -05 000000024 INF: FPGA: Recv EX2MV 15-12-21 22:06:23.453 -05 000000081 INF: Excitation Filter 2: Moved -107 steps in 413.016 ms 15-12-21 22:06:23.453 -05 000000081 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 415.2413 ms 15-12-21 22:06:23.453 -05 000000081 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 415.3154 ms 15-12-21 22:06:23.455 -05 000000081 INF: ====================================== 15-12-21 22:06:23.456 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:23.460 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:23.465 -05 000000068 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:06:23.465 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:06:23.465 -05 000000036 INF: ===================FPGA Z Wait=================== 15-12-21 22:06:23.469 -05 000000036 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:06:23.469 -05 000000061 INF: ===================Move Y Motor without settling=================== 15-12-21 22:06:23.470 -05 000000061 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6887 mm 15-12-21 22:06:23.470 -05 000000068 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:06:23.474 -05 000000061 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:06:23.478 -05 000000061 INF: Y Motor: Xmit 1G\n 15-12-21 22:06:23.478 -05 000000068 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:06:23.478 -05 000000028 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:06:23.483 -05 000000065 INF: ===================Camera TDI=================== 15-12-21 22:06:23.483 -05 000000009 INF: ===================Camera TDI=================== 15-12-21 22:06:23.516 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:23.516 -05 000000061 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:06:23.517 -05 000000061 INF: Y Motor: Recv 1G\r\n 15-12-21 22:06:23.518 -05 000000061 INF: Y Motor: Xmit 1D\n 15-12-21 22:06:23.578 -05 000000061 INF: Y Motor: Recv 1D\r\n 15-12-21 22:06:23.579 -05 000000061 INF: Y Motor: Recv *407662\r\n 15-12-21 22:06:23.581 -05 000000061 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:06:23.766 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:23.772 -05 000000078 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:06:23.828 -05 000000023 INF: FPGA: Recv ZWAIT 15-12-21 22:06:23.829 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:23.829 -05 000000036 INF: ====================================== 15-12-21 22:06:23.939 -05 000000065 INF: ===================Frame #1=================== 15-12-21 22:06:23.940 -05 000000009 INF: ===================Frame #1=================== 15-12-21 22:06:24.079 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:24.089 -05 000000065 INF: ===================Frame #13=================== 15-12-21 22:06:24.090 -05 000000009 INF: ===================Frame #13=================== 15-12-21 22:06:24.140 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:24.239 -05 000000065 INF: ===================Frame #25=================== 15-12-21 22:06:24.240 -05 000000009 INF: ===================Frame #25=================== 15-12-21 22:06:24.393 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:24.393 -05 000000065 INF: ===================Frame #37=================== 15-12-21 22:06:24.394 -05 000000009 INF: ===================Frame #37=================== 15-12-21 22:06:24.450 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:24.504 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:24.544 -05 000000009 INF: ===================Frame #49=================== 15-12-21 22:06:24.544 -05 000000065 INF: ===================Frame #49=================== 15-12-21 22:06:24.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:24.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:24.680 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:24.694 -05 000000009 INF: ===================Frame #61=================== 15-12-21 22:06:24.694 -05 000000065 INF: ===================Frame #61=================== 15-12-21 22:06:24.700 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:24.703 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:24.703 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:24.764 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:24.772 -05 000000078 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:06:24.808 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:24.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:24.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:24.844 -05 000000009 INF: ===================Frame #73=================== 15-12-21 22:06:24.844 -05 000000065 INF: ===================Frame #73=================== 15-12-21 22:06:24.996 -05 000000009 INF: ===================Frame #85=================== 15-12-21 22:06:24.996 -05 000000065 INF: ===================Frame #85=================== 15-12-21 22:06:25.000 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:25.014 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:25.015 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 43.925C:A1\r\n 15-12-21 22:06:25.015 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:25.076 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:25.146 -05 000000009 INF: ===================Frame #97=================== 15-12-21 22:06:25.146 -05 000000065 INF: ===================Frame #97=================== 15-12-21 22:06:25.296 -05 000000065 INF: ===================Frame #108=================== 15-12-21 22:06:25.296 -05 000000009 INF: ===================Frame #108=================== 15-12-21 22:06:25.326 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:25.387 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:25.624 -05 000000009 INF: ===================Frame #134=================== 15-12-21 22:06:25.625 -05 000000065 INF: ===================Frame #134=================== 15-12-21 22:06:25.637 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:25.701 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:25.774 -05 000000078 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:06:25.820 -05 000000009 INF: ===================Frame #150=================== 15-12-21 22:06:25.822 -05 000000065 INF: ===================Frame #150=================== 15-12-21 22:06:25.951 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:25.996 -05 000000009 INF: ===================Frame #164=================== 15-12-21 22:06:25.997 -05 000000065 INF: ===================Frame #164=================== 15-12-21 22:06:26.011 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:26.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:26.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:26.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:26.172 -05 000000009 INF: ===================Frame #178=================== 15-12-21 22:06:26.172 -05 000000065 INF: ===================Frame #178=================== 15-12-21 22:06:26.180 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:26.200 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 26.903C:A1\r\n 15-12-21 22:06:26.200 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:26.261 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:26.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:26.322 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:26.346 -05 000000009 INF: ===================Frame #192=================== 15-12-21 22:06:26.346 -05 000000065 INF: ===================Frame #192=================== 15-12-21 22:06:26.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:26.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:26.496 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:26.513 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:26.513 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:26.517 -05 000000065 INF: ===================Frame #205=================== 15-12-21 22:06:26.517 -05 000000009 INF: ===================Frame #205=================== 15-12-21 22:06:26.572 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:26.636 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:26.667 -05 000000065 INF: ===================Frame #217=================== 15-12-21 22:06:26.667 -05 000000009 INF: ===================Frame #217=================== 15-12-21 22:06:26.774 -05 000000078 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:06:26.817 -05 000000009 INF: ===================Frame #229=================== 15-12-21 22:06:26.817 -05 000000065 INF: ===================Frame #229=================== 15-12-21 22:06:26.886 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:26.948 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:26.967 -05 000000009 INF: ===================Frame #241=================== 15-12-21 22:06:26.967 -05 000000065 INF: ===================Frame #241=================== 15-12-21 22:06:27.117 -05 000000009 INF: ===================Frame #252=================== 15-12-21 22:06:27.117 -05 000000065 INF: ===================Frame #252=================== 15-12-21 22:06:27.187 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:27.198 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:27.259 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:27.259 -05 000000079 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:06:27.259 -05 000000079 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:06:27.260 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:06:27.260 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:27.359 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:06:27.361 -05 000000065 INF: ===================Frame #272=================== 15-12-21 22:06:27.361 -05 000000009 INF: ===================Frame #272=================== 15-12-21 22:06:27.448 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:27.542 -05 000000009 INF: ===================Frame #286=================== 15-12-21 22:06:27.542 -05 000000065 INF: ===================Frame #286=================== 15-12-21 22:06:27.548 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:27.635 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:27.716 -05 000000065 INF: ===================Frame #300=================== 15-12-21 22:06:27.716 -05 000000009 INF: ===================Frame #300=================== 15-12-21 22:06:27.774 -05 000000078 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:06:27.800 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:27.822 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:27.822 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:27.885 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:27.890 -05 000000009 INF: ===================Frame #314=================== 15-12-21 22:06:27.890 -05 000000065 INF: ===================Frame #314=================== 15-12-21 22:06:27.925 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:27.948 -05 000000079 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:27.948 -05 000000079 INF: ====================================== 15-12-21 22:06:27.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:27.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:28.052 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:28.064 -05 000000009 INF: ===================Frame #327=================== 15-12-21 22:06:28.064 -05 000000065 INF: ===================Frame #327=================== 15-12-21 22:06:28.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:28.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:28.215 -05 000000009 INF: ===================Frame #339=================== 15-12-21 22:06:28.215 -05 000000065 INF: ===================Frame #339=================== 15-12-21 22:06:28.365 -05 000000065 INF: ===================Frame #351=================== 15-12-21 22:06:28.365 -05 000000009 INF: ===================Frame #351=================== 15-12-21 22:06:28.515 -05 000000009 INF: ===================Frame #363=================== 15-12-21 22:06:28.515 -05 000000065 INF: ===================Frame #363=================== 15-12-21 22:06:28.665 -05 000000065 INF: ===================Frame #375=================== 15-12-21 22:06:28.665 -05 000000009 INF: ===================Frame #375=================== 15-12-21 22:06:28.774 -05 000000078 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:06:28.816 -05 000000065 INF: ===================Frame #387=================== 15-12-21 22:06:28.816 -05 000000009 INF: ===================Frame #387=================== 15-12-21 22:06:28.966 -05 000000065 INF: ===================Frame #399=================== 15-12-21 22:06:28.966 -05 000000009 INF: ===================Frame #399=================== 15-12-21 22:06:29.116 -05 000000065 INF: ===================Frame #410=================== 15-12-21 22:06:29.116 -05 000000009 INF: ===================Frame #410=================== 15-12-21 22:06:29.295 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:29.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:29.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:29.416 -05 000000009 INF: ===================Frame #434=================== 15-12-21 22:06:29.417 -05 000000065 INF: ===================Frame #434=================== 15-12-21 22:06:29.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:29.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:29.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:29.544 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:29.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:29.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:29.603 -05 000000009 INF: ===================Frame #449=================== 15-12-21 22:06:29.604 -05 000000065 INF: ===================Frame #449=================== 15-12-21 22:06:29.753 -05 000000009 INF: ===================Frame #461=================== 15-12-21 22:06:29.754 -05 000000065 INF: ===================Frame #461=================== 15-12-21 22:06:29.774 -05 000000078 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:06:29.903 -05 000000009 INF: ===================Frame #473=================== 15-12-21 22:06:29.904 -05 000000065 INF: ===================Frame #473=================== 15-12-21 22:06:30.053 -05 000000009 INF: ===================Frame #485=================== 15-12-21 22:06:30.054 -05 000000065 INF: ===================Frame #485=================== 15-12-21 22:06:30.123 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:30.194 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 49.204C:A1\r\n 15-12-21 22:06:30.194 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:30.204 -05 000000009 INF: ===================Frame #496=================== 15-12-21 22:06:30.204 -05 000000065 INF: ===================Frame #496=================== 15-12-21 22:06:30.463 -05 000000065 INF: ===================Frame #517=================== 15-12-21 22:06:30.471 -05 000000009 INF: ===================Frame #518=================== 15-12-21 22:06:30.613 -05 000000065 INF: ===================Frame #529=================== 15-12-21 22:06:30.642 -05 000000009 INF: ===================Frame #531=================== 15-12-21 22:06:30.763 -05 000000065 INF: ===================Frame #541=================== 15-12-21 22:06:30.774 -05 000000078 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:06:30.792 -05 000000009 INF: ===================Frame #543=================== 15-12-21 22:06:30.799 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:30.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:30.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:30.913 -05 000000065 INF: ===================Frame #553=================== 15-12-21 22:06:30.923 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:30.943 -05 000000009 INF: ===================Frame #555=================== 15-12-21 22:06:30.945 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:30.945 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:31.053 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:31.065 -05 000000065 INF: ===================Frame #565=================== 15-12-21 22:06:31.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:31.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:31.093 -05 000000009 INF: ===================Frame #567=================== 15-12-21 22:06:31.215 -05 000000065 INF: ===================Frame #576=================== 15-12-21 22:06:31.243 -05 000000009 INF: ===================Frame #579=================== 15-12-21 22:06:31.306 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:31.317 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 24.497C:A1\r\n 15-12-21 22:06:31.317 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:31.393 -05 000000009 INF: ===================Frame #590=================== 15-12-21 22:06:31.443 -05 000000065 INF: ===================Frame #594=================== 15-12-21 22:06:31.627 -05 000000065 INF: ===================Frame #609=================== 15-12-21 22:06:31.629 -05 000000009 INF: ===================Frame #609=================== 15-12-21 22:06:31.775 -05 000000078 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:06:31.778 -05 000000065 INF: ===================Frame #621=================== 15-12-21 22:06:31.780 -05 000000009 INF: ===================Frame #621=================== 15-12-21 22:06:31.928 -05 000000065 INF: ===================Frame #633=================== 15-12-21 22:06:31.930 -05 000000009 INF: ===================Frame #633=================== 15-12-21 22:06:32.078 -05 000000065 INF: ===================Frame #645=================== 15-12-21 22:06:32.080 -05 000000009 INF: ===================Frame #645=================== 15-12-21 22:06:32.228 -05 000000065 INF: ===================Frame #656=================== 15-12-21 22:06:32.230 -05 000000009 INF: ===================Frame #657=================== 15-12-21 22:06:32.295 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:32.316 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:32.316 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:32.380 -05 000000009 INF: ===================Frame #668=================== 15-12-21 22:06:32.416 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:32.440 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.013C:A1\r\n 15-12-21 22:06:32.440 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:32.443 -05 000000065 INF: ===================Frame #673=================== 15-12-21 22:06:32.543 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:32.565 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:32.565 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:32.594 -05 000000065 INF: ===================Frame #685=================== 15-12-21 22:06:32.610 -05 000000009 INF: ===================Frame #687=================== 15-12-21 22:06:32.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:32.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:32.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:32.744 -05 000000065 INF: ===================Frame #697=================== 15-12-21 22:06:32.760 -05 000000009 INF: ===================Frame #699=================== 15-12-21 22:06:32.775 -05 000000078 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:06:32.895 -05 000000065 INF: ===================Frame #709=================== 15-12-21 22:06:32.910 -05 000000009 INF: ===================Frame #710=================== 15-12-21 22:06:33.045 -05 000000065 INF: ===================Frame #721=================== 15-12-21 22:06:33.103 -05 000000009 INF: ===================Frame #726=================== 15-12-21 22:06:33.195 -05 000000065 INF: ===================Frame #733=================== 15-12-21 22:06:33.268 -05 000000009 INF: ===================Frame #739=================== 15-12-21 22:06:33.346 -05 000000065 INF: ===================Frame #745=================== 15-12-21 22:06:33.418 -05 000000009 INF: ===================Frame #751=================== 15-12-21 22:06:33.496 -05 000000065 INF: ===================Frame #757=================== 15-12-21 22:06:33.569 -05 000000009 INF: ===================Frame #762=================== 15-12-21 22:06:33.646 -05 000000065 INF: ===================Frame #769=================== 15-12-21 22:06:33.753 -05 000000009 INF: ===================Frame #777=================== 15-12-21 22:06:33.775 -05 000000078 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:06:33.796 -05 000000065 INF: ===================Frame #780=================== 15-12-21 22:06:33.904 -05 000000009 INF: ===================Frame #789=================== 15-12-21 22:06:33.914 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:33.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:33.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:34.038 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:34.054 -05 000000009 INF: ===================Frame #801=================== 15-12-21 22:06:34.067 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:34.067 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:34.074 -05 000000065 INF: ===================Frame #802=================== 15-12-21 22:06:34.171 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:34.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:34.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:34.205 -05 000000009 INF: ===================Frame #813=================== 15-12-21 22:06:34.245 -05 000000065 INF: ===================Frame #816=================== 15-12-21 22:06:34.355 -05 000000009 INF: ===================Frame #825=================== 15-12-21 22:06:34.412 -05 000000065 INF: ===================Frame #829=================== 15-12-21 22:06:34.506 -05 000000009 INF: ===================Frame #837=================== 15-12-21 22:06:34.562 -05 000000065 INF: ===================Frame #841=================== 15-12-21 22:06:34.656 -05 000000009 INF: ===================Frame #848=================== 15-12-21 22:06:34.713 -05 000000065 INF: ===================Frame #853=================== 15-12-21 22:06:34.775 -05 000000078 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:06:34.863 -05 000000065 INF: ===================Frame #865=================== 15-12-21 22:06:34.890 -05 000000009 INF: ===================Frame #867=================== 15-12-21 22:06:35.014 -05 000000065 INF: ===================Frame #877=================== 15-12-21 22:06:35.040 -05 000000009 INF: ===================Frame #879=================== 15-12-21 22:06:35.164 -05 000000065 INF: ===================Frame #889=================== 15-12-21 22:06:35.190 -05 000000009 INF: ===================Frame #891=================== 15-12-21 22:06:35.315 -05 000000065 INF: ===================Frame #900=================== 15-12-21 22:06:35.340 -05 000000009 INF: ===================Frame #902=================== 15-12-21 22:06:35.415 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:35.436 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 54.163C:A1\r\n 15-12-21 22:06:35.436 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:35.536 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:35.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:35.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:35.575 -05 000000009 INF: ===================Frame #921=================== 15-12-21 22:06:35.584 -05 000000065 INF: ===================Frame #922=================== 15-12-21 22:06:35.661 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:35.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:35.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:35.726 -05 000000009 INF: ===================Frame #933=================== 15-12-21 22:06:35.755 -05 000000065 INF: ===================Frame #935=================== 15-12-21 22:06:35.775 -05 000000078 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:06:35.787 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:35.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:35.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:35.876 -05 000000009 INF: ===================Frame #945=================== 15-12-21 22:06:35.905 -05 000000065 INF: ===================Frame #947=================== 15-12-21 22:06:36.027 -05 000000009 INF: ===================Frame #957=================== 15-12-21 22:06:36.057 -05 000000065 INF: ===================Frame #959=================== 15-12-21 22:06:36.177 -05 000000009 INF: ===================Frame #969=================== 15-12-21 22:06:36.207 -05 000000065 INF: ===================Frame #971=================== 15-12-21 22:06:36.328 -05 000000009 INF: ===================Frame #981=================== 15-12-21 22:06:36.357 -05 000000065 INF: ===================Frame #983=================== 15-12-21 22:06:36.424 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:36.478 -05 000000009 INF: ===================Frame #992=================== 15-12-21 22:06:36.497 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 22.203C:A1\r\n 15-12-21 22:06:36.497 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:36.507 -05 000000065 INF: ===================Frame #995=================== 15-12-21 22:06:36.657 -05 000000065 INF: ===================Frame #1007=================== 15-12-21 22:06:36.718 -05 000000009 INF: ===================Frame #1011=================== 15-12-21 22:06:36.775 -05 000000078 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:06:36.807 -05 000000065 INF: ===================Frame #1018=================== 15-12-21 22:06:36.868 -05 000000009 INF: ===================Frame #1023=================== 15-12-21 22:06:37.019 -05 000000009 INF: ===================Frame #1035=================== 15-12-21 22:06:37.038 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:37.053 -05 000000065 INF: ===================Frame #1038=================== 15-12-21 22:06:37.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:37.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:37.160 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:37.169 -05 000000009 INF: ===================Frame #1047=================== 15-12-21 22:06:37.182 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:37.182 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:37.222 -05 000000065 INF: ===================Frame #1051=================== 15-12-21 22:06:37.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:37.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:37.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:37.319 -05 000000009 INF: ===================Frame #1059=================== 15-12-21 22:06:37.373 -05 000000065 INF: ===================Frame #1063=================== 15-12-21 22:06:37.469 -05 000000009 INF: ===================Frame #1071=================== 15-12-21 22:06:37.524 -05 000000065 INF: ===================Frame #1075=================== 15-12-21 22:06:37.543 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:37.557 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:06:37.557 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:37.619 -05 000000009 INF: ===================Frame #1083=================== 15-12-21 22:06:37.674 -05 000000065 INF: ===================Frame #1087=================== 15-12-21 22:06:37.769 -05 000000009 INF: ===================Frame #1095=================== 15-12-21 22:06:37.773 -05 000000078 INF: ===================WaitCommand=================== 15-12-21 22:06:37.773 -05 000000078 INF: WaitCommand(15000) end 15-12-21 22:06:37.773 -05 000000078 INF: ====================================== 15-12-21 22:06:37.774 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:37.775 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:37.783 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:37.784 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:37.824 -05 000000065 INF: ===================Frame #1099=================== 15-12-21 22:06:37.869 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:37.869 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Selecting Reagent CWM (8)=================== 15-12-21 22:06:37.869 -05 000000062 INF: Valve B2: Go to position 8 15-12-21 22:06:37.869 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:06:37.919 -05 000000009 INF: ===================Frame #1106=================== 15-12-21 22:06:37.931 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 7\r 15-12-21 22:06:37.931 -05 000000062 INF: Valve B2: 30.769 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:06:37.931 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 7 to 8 15-12-21 22:06:37.931 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW8\r 15-12-21 22:06:37.932 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:06:37.932 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:06:37.974 -05 000000065 INF: ===================Frame #1111=================== 15-12-21 22:06:38.125 -05 000000065 INF: ===================Frame #1123=================== 15-12-21 22:06:38.190 -05 000000009 INF: ===================Frame #1128=================== 15-12-21 22:06:38.275 -05 000000065 INF: ===================Frame #1135=================== 15-12-21 22:06:38.306 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 8\r 15-12-21 22:06:38.306 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:38.307 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:06:38.307 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:38.364 -05 000000009 INF: ===================Frame #1142=================== 15-12-21 22:06:38.369 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:06:38.369 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:38.426 -05 000000065 INF: ===================Frame #1146=================== 15-12-21 22:06:38.529 -05 000000009 INF: ===================Frame #1155=================== 15-12-21 22:06:38.599 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:06:38.619 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:06:38.619 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:38.680 -05 000000009 INF: ===================Frame #1167=================== 15-12-21 22:06:38.688 -05 000000065 INF: ===================Frame #1167=================== 15-12-21 22:06:38.724 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:38.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:38.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:38.830 -05 000000009 INF: ===================Frame #1178=================== 15-12-21 22:06:38.838 -05 000000065 INF: ===================Frame #1179=================== 15-12-21 22:06:38.847 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:38.867 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:06:38.867 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:38.970 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:38.970 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:38.971 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 22:06:38.971 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:38.988 -05 000000065 INF: ===================Frame #1191=================== 15-12-21 22:06:38.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:38.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:39.019 -05 000000009 INF: ===================Frame #1193=================== 15-12-21 22:06:39.052 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:39.061 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:06:39.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:39.118 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:39.118 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:39.138 -05 000000065 INF: ===================Frame #1203=================== 15-12-21 22:06:39.152 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:06:39.169 -05 000000009 INF: ===================Frame #1205=================== 15-12-21 22:06:39.241 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:06:39.241 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 22:06:39.241 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:06:39.288 -05 000000065 INF: ===================Frame #1215=================== 15-12-21 22:06:39.319 -05 000000009 INF: ===================Frame #1217=================== 15-12-21 22:06:39.341 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P4608R\r 15-12-21 22:06:39.429 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:39.438 -05 000000065 INF: ===================Frame #1226=================== 15-12-21 22:06:39.470 -05 000000009 INF: ===================Frame #1229=================== 15-12-21 22:06:39.529 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:39.618 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:39.620 -05 000000009 INF: ===================Frame #1241=================== 15-12-21 22:06:39.665 -05 000000065 INF: ===================Frame #1244=================== 15-12-21 22:06:39.739 -05 000000079 INF: FPGA: Recv TDIYWAIT 15-12-21 22:06:39.740 -05 000000068 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:06:39.750 -05 000000068 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:06:39.758 -05 000000092 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:06:39.758 -05 000000064 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:06:39.758 -05 000000092 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:06:39.758 -05 000000092 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:06:39.759 -05 000000092 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:06:39.759 -05 000000092 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:06:39.759 -05 000000064 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:06:39.759 -05 000000064 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:06:39.759 -05 000000064 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:06:39.761 -05 000000064 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:06:39.771 -05 000000009 INF: ===================Frame #1250=================== 15-12-21 22:06:39.833 -05 000000065 INF: ===================Frame #1250=================== 15-12-21 22:06:39.840 -05 000000009 INF: Camera complete - got 1250 frames. 15-12-21 22:06:39.841 -05 000000065 INF: Camera complete - got 1250 frames. 15-12-21 22:06:39.842 -05 000000009 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:06:39.843 -05 000000065 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:06:39.868 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:39.925 -05 000000025 INF: FPGA: Recv EX1MV 15-12-21 22:06:39.925 -05 000000064 INF: Excitation Filter 1: Moved 36 steps in 166.3249 ms 15-12-21 22:06:39.925 -05 000000064 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 166.4081 ms 15-12-21 22:06:39.925 -05 000000064 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 166.4711 ms 15-12-21 22:06:39.926 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:39.926 -05 000000064 INF: ====================================== 15-12-21 22:06:40.176 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:40.177 -05 000000036 INF: FPGA: Recv EX2MV 15-12-21 22:06:40.177 -05 000000092 INF: Excitation Filter 2: Moved 107 steps in 418.5538 ms 15-12-21 22:06:40.177 -05 000000092 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 418.6445 ms 15-12-21 22:06:40.177 -05 000000092 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 418.7836 ms 15-12-21 22:06:40.178 -05 000000092 INF: ====================================== 15-12-21 22:06:40.185 -05 000000068 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:06:40.191 -05 000000068 INF: ====================================== 15-12-21 22:06:40.197 -05 000000065 INF: ===================Camera TDI=================== 15-12-21 22:06:40.218 -05 000000065 INF: ====================================== 15-12-21 22:06:40.240 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:40.317 -05 000000009 INF: ===================Camera TDI=================== 15-12-21 22:06:40.337 -05 000000009 INF: ====================================== 15-12-21 22:06:40.339 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:06:40.348 -05 000000028 INF: ====================================== 15-12-21 22:06:40.412 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:40.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:40.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:40.490 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:40.532 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:40.551 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:40.552 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:40.552 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:40.616 -05 000000061 INF: Y Motor: Moved to 9.0765 after 17035 ms 15-12-21 22:06:40.617 -05 000000061 INF: ====================================== 15-12-21 22:06:40.618 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:40.622 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:40.627 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:40.630 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:06:40.678 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:40.685 -05 000000028 INF: FPGA: Recv TDICLINES 9352 15-12-21 22:06:40.685 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:06:40.738 -05 000000047 INF: FPGA: Recv TDIYERD 907652 15-12-21 22:06:40.738 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:06:40.742 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 58.364C:A1\r\n 15-12-21 22:06:40.742 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:40.820 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:40.821 -05 000000022 INF: FPGA: Recv ZADCR 37762 15-12-21 22:06:40.821 -05 000000057 INF: At scan end Y pos = 9.077 and Z pos = -0.144. Y moved -60.303 mm 15-12-21 22:06:40.821 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:06:40.904 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:40.911 -05 000000084 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:06:40.911 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:06:40.920 -05 000000057 INF: TDIScan finished after 23634.2038 ms 15-12-21 22:06:40.920 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:06:40.920 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:06:40.930 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:41.004 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:41.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:41.045 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.028 um 15-12-21 22:06:41.046 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.049 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.050 -05 000000028 INF: ===================Dither Clean Up Command=================== 15-12-21 22:06:41.051 -05 000000045 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:06:41.051 -05 000000045 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:06:41.052 -05 000000049 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:06:41.052 -05 000000009 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:06:41.052 -05 000000079 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:06:41.052 -05 000000079 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:06:41.052 -05 000000009 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:06:41.054 -05 000000055 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:06:41.054 -05 000000009 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:06:41.055 -05 000000055 INF: ===================LFT:Extracting coords=================== 15-12-21 22:06:41.104 -05 000000055 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:06:41.105 -05 000000055 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:06:41.107 -05 000000043 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:41.107 -05 000000043 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:06:41.107 -05 000000074 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:41.108 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:41.108 -05 000000074 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:06:41.108 -05 000000082 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:06:41.113 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:41.114 -05 000000045 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:06:41.114 -05 000000068 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:06:41.115 -05 000000045 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:06:41.135 -05 000000022 INF: FPGA: Recv ZSEL 15-12-21 22:06:41.175 -05 000000049 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:06:41.175 -05 000000022 INF: FPGA: Recv ZSTEP 15-12-21 22:06:41.175 -05 000000079 INF: FPGA: Xmit ZDACW 42513\n 15-12-21 22:06:41.175 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:41.176 -05 000000045 INF: ====================================== 15-12-21 22:06:41.176 -05 000000009 INF: ====================================== 15-12-21 22:06:41.236 -05 000000036 INF: FPGA: Recv ZDACW 15-12-21 22:06:41.237 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:41.237 -05 000000079 INF: ====================================== 15-12-21 22:06:41.238 -05 000000049 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:06:41.239 -05 000000049 INF: ====================================== 15-12-21 22:06:41.310 -05 000000043 INF: LFT found best fwhm score 2.888783 in 159 ms 15-12-21 22:06:41.310 -05 000000043 INF: LFT found good score at index 5473 with fwhm value 2.888783. Next cycle, cycle 40 starting Z position for top surface is at -0.170 mm FC:A, C:39,L:1,T 15-12-21 22:06:41.310 -05 000000043 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:41.310 -05 000000043 INF: ====================================== 15-12-21 22:06:41.331 -05 000000082 INF: LFT found best fwhm score 2.983114 in 181 ms 15-12-21 22:06:41.331 -05 000000082 INF: LFT found good score at index 6185 with fwhm value 2.983114. Next cycle, cycle 40 starting Z position for top surface is at -0.170 mm FC:A, C:39,L:1,T 15-12-21 22:06:41.331 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:41.332 -05 000000082 INF: ====================================== 15-12-21 22:06:41.415 -05 000000074 INF: LFT found best fwhm score 2.771344 in 265 ms 15-12-21 22:06:41.415 -05 000000074 INF: LFT found good score at index 5341 with fwhm value 2.771344. Next cycle, cycle 40 starting Z position for top surface is at -0.170 mm FC:A, C:39,L:1,T 15-12-21 22:06:41.416 -05 000000068 INF: LFT found best fwhm score 2.980765 in 241 ms 15-12-21 22:06:41.416 -05 000000068 INF: LFT found good score at index 5329 with fwhm value 2.980765. Next cycle, cycle 40 starting Z position for top surface is at -0.170 mm FC:A, C:39,L:1,T 15-12-21 22:06:41.416 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:41.416 -05 000000074 INF: ===================LookupFocusTracking=================== 15-12-21 22:06:41.417 -05 000000068 INF: ====================================== 15-12-21 22:06:41.418 -05 000000074 INF: ====================================== 15-12-21 22:06:41.421 -05 000000055 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:06:41.422 -05 000000055 INF: LFT weighted average best Z for top surface is at -0.170mm FC:A, C:39,L:1,T 15-12-21 22:06:41.423 -05 000000055 INF: ====================================== 15-12-21 22:06:41.425 -05 000000028 INF: ====================================== 15-12-21 22:06:41.427 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.430 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:06:41.430 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.431 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:06:41.431 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.431 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:06:41.431 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.431 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:06:41.431 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.431 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:06:41.432 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:06:41.433 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:06:41.433 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:06:41.433 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 22:06:41.433 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:06:41.434 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 15-12-21 22:06:41.435 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:06:41.435 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:06:41.436 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:06:41.436 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:06:41.437 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:06:41.439 -05 000000056 INF: ===================Registering and Extracting C039 L001 T1101=================== 15-12-21 22:06:41.439 -05 000000033 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102=================== 15-12-21 22:06:41.441 -05 000000034 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103=================== 15-12-21 22:06:41.441 -05 000000020 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104=================== 15-12-21 22:06:41.442 -05 000000044 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105=================== 15-12-21 22:06:41.444 -05 000000072 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106=================== 15-12-21 22:06:41.445 -05 000000031 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1107=================== 15-12-21 22:06:41.447 -05 000000088 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1107, Registering and Extracting C039 L001 T1108=================== 15-12-21 22:06:41.488 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:41.498 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.498 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:06:41.498 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:41.498 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -162.2 um, section = A_1 15-12-21 22:06:41.502 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:06:41.505 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:06:41.506 -05 000000082 INF: ===================MoveEmissionFilters=================== 15-12-21 22:06:41.506 -05 000000045 INF: ===================Move X,Y=================== 15-12-21 22:06:41.507 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:06:41.509 -05 000000058 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:06:41.514 -05 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:06:41.514 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:06:41.514 -05 000000028 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:06:41.514 -05 000000045 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:06:41.514 -05 000000024 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:06:41.514 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:06:41.515 -05 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:06:41.515 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:06:41.516 -05 000000047 INF: ===================Move X Motor without settling=================== 15-12-21 22:06:41.516 -05 000000047 INF: X Motor: Xmit PR VM\n 15-12-21 22:06:41.516 -05 000000028 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:06:41.516 -05 000000025 INF: ===================Move Y Motor without settling=================== 15-12-21 22:06:41.516 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:06:41.516 -05 000000058 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:06:41.516 -05 000000079 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:06:41.517 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:06:41.518 -05 000000084 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:06:41.518 -05 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:06:41.518 -05 000000048 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:06:41.518 -05 000000092 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:06:41.519 -05 000000079 INF: ====================================== 15-12-21 22:06:41.519 -05 000000092 INF: ====================================== 15-12-21 22:06:41.520 -05 000000023 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:06:41.520 -05 000000084 INF: ====================================== 15-12-21 22:06:41.521 -05 000000055 INF: ===================TDI Scan Setup=================== 15-12-21 22:06:41.521 -05 000000048 INF: ====================================== 15-12-21 22:06:41.521 -05 000000025 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:06:41.521 -05 000000025 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:06:41.522 -05 000000025 INF: Y Motor: Xmit 1G\n 15-12-21 22:06:41.529 -05 000000037 INF: ====================================== 15-12-21 22:06:41.529 -05 000000023 INF: ====================================== 15-12-21 22:06:41.529 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:41.529 -05 000000043 INF: ===================Camera Arm TDI=================== 15-12-21 22:06:41.529 -05 000000009 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:06:41.531 -05 000000055 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:06:41.533 -05 000000028 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:06:41.533 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:06:41.533 -05 000000009 INF: ====================================== 15-12-21 22:06:41.533 -05 000000055 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:06:41.534 -05 000000055 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:06:41.534 -05 000000054 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:06:41.534 -05 000000063 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:06:41.541 -05 000000054 INF: ====================================== 15-12-21 22:06:41.543 -05 000000063 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:06:41.543 -05 000000063 INF: ====================================== 15-12-21 22:06:41.543 -05 000000078 INF: ====================================== 15-12-21 22:06:41.544 -05 000000058 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:06:41.545 -05 000000028 INF: ====================================== 15-12-21 22:06:41.547 -05 000000058 INF: ====================================== 15-12-21 22:06:41.549 -05 000000064 INF: FPGA: Recv ZSEL 15-12-21 22:06:41.549 -05 000000055 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:06:41.550 -05 000000025 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:06:41.550 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:41.550 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:41.550 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 22:06:41.551 -05 000000025 INF: Y Motor: Recv 1G\r\n 15-12-21 22:06:41.551 -05 000000082 INF: ====================================== 15-12-21 22:06:41.552 -05 000000025 INF: Y Motor: Xmit 1D\n 15-12-21 22:06:41.560 -05 000000055 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:06:41.560 -05 000000055 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:06:41.560 -05 000000055 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:06:41.582 -05 000000047 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:06:41.582 -05 000000047 INF: X Motor: Xmit PR VI\n 15-12-21 22:06:41.604 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:41.636 -05 000000025 INF: Y Motor: Recv 1D\r\n 15-12-21 22:06:41.701 -05 000000036 INF: FPGA: Recv ZSTEP 15-12-21 22:06:41.701 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:06:41.702 -05 000000025 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:06:41.703 -05 000000047 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:06:41.703 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.057C:A1\r\n 15-12-21 22:06:41.703 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:41.703 -05 000000047 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:06:41.703 -05 000000047 INF: X Motor: Moving to 13.6440 mm @15.000 mm/sec, started at 12.8696 mm 15-12-21 22:06:41.703 -05 000000025 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:06:41.703 -05 000000047 INF: X Motor: Xmit MA -18578\n 15-12-21 22:06:41.704 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:41.706 -05 000000055 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:06:41.707 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:41.711 -05 000000055 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:06:41.711 -05 000000055 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:06:41.711 -05 000000055 INF: Z Motor: Arming to move to -0.1222 mm 15-12-21 22:06:41.711 -05 000000055 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:06:41.752 -05 000000084 INF: FPGA: Recv ZYT 15-12-21 22:06:41.752 -05 000000055 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907649 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:06:41.752 -05 000000055 INF: FPGA: Xmit ZARM 32028\n 15-12-21 22:06:41.753 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 22:06:41.753 -05 000000062 INF: Current Position of Pump is: 4608 15-12-21 22:06:41.753 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:06:41.754 -05 000000047 INF: X Motor: Recv MA -18578\r\n> 15-12-21 22:06:41.754 -05 000000047 INF: X Motor: WaitUntilStopped 60052 15-12-21 22:06:41.837 -05 000000009 INF: FPGA: Recv ZARM 15-12-21 22:06:41.837 -05 000000055 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 85.3309 ms 15-12-21 22:06:41.837 -05 000000055 INF: Z Motor: ArmAbsStepped took 125.0611 ms 15-12-21 22:06:41.839 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:06:41.842 -05 000000055 INF: ===================TDI Scan Setup=================== 15-12-21 22:06:41.854 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:06:41.875 -05 000000055 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:06:41.880 -05 000000055 INF: ===================TDI Scan Setup=================== 15-12-21 22:06:41.898 -05 000000055 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:06:41.919 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:41.920 -05 000000055 INF: ===================TDI Scan Setup=================== 15-12-21 22:06:41.935 -05 000000055 INF: ====================================== 15-12-21 22:06:42.019 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:42.074 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:42.362 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:42.368 -05 000000047 INF: X Motor: Xmit PR ER\n 15-12-21 22:06:42.469 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:42.469 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:42.470 -05 000000047 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:06:42.470 -05 000000047 INF: X Motor: Moved to 13.6436 after 716 ms 15-12-21 22:06:42.470 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:06:42.473 -05 000000047 INF: ====================================== 15-12-21 22:06:42.494 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:42.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:42.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:42.620 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:42.644 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:06:42.644 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:42.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:42.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:42.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:43.044 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:43.095 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 22:06:43.095 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:43.226 -05 000000043 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:06:43.227 -05 000000043 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:06:43.227 -05 000000043 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:06:43.234 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:06:43.299 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:06:43.299 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:43.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:43.442 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:43.442 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:43.542 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:06:43.596 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:06:43.596 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:43.702 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:43.703 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:43.705 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:43.705 -05 000000062 INF: WaitCommand(5000) start 15-12-21 22:06:43.705 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 22:06:44.705 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:44.706 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 22:06:44.778 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:44.778 -05 000000043 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:06:44.778 -05 000000043 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:06:44.778 -05 000000043 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:06:44.783 -05 000000043 INF: ====================================== 15-12-21 22:06:44.786 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:06:44.792 -05 000000024 INF: ====================================== 15-12-21 22:06:44.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:44.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:44.899 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:44.922 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:44.922 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:45.025 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:45.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:45.044 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:45.170 -05 000000025 INF: Y Motor: Moved to 70.6886 after 3466 ms 15-12-21 22:06:45.171 -05 000000025 INF: ====================================== 15-12-21 22:06:45.173 -05 000000045 INF: ===================Move X,Y=================== 15-12-21 22:06:45.182 -05 000000045 INF: ====================================== 15-12-21 22:06:45.187 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:06:45.192 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:45.193 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:06:45.233 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:06:45.234 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:06:45.294 -05 000000074 INF: FPGA: Recv ZFREQCL 15-12-21 22:06:45.295 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:06:45.295 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:45.296 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:06:45.356 -05 000000022 INF: FPGA: Recv TDIYERD 7068854 15-12-21 22:06:45.356 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068854 counts (70.689 mm) 15-12-21 22:06:45.357 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:06:45.358 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:06:45.367 -05 000000009 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:06:45.367 -05 000000054 INF: ===================TDI FPGA Arm=================== 15-12-21 22:06:45.371 -05 000000009 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:06:45.375 -05 000000054 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:06:45.380 -05 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:06:45.380 -05 000000054 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:06:45.418 -05 000000047 INF: FPGA: Recv TDIYPOS 15-12-21 22:06:45.419 -05 000000009 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:06:45.419 -05 000000054 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:06:45.420 -05 000000009 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:06:45.420 -05 000000009 INF: ====================================== 15-12-21 22:06:45.425 -05 000000054 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:06:45.427 -05 000000054 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:06:45.480 -05 000000079 INF: FPGA: Recv TDIYARM3 15-12-21 22:06:45.481 -05 000000054 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:06:45.483 -05 000000054 INF: ===================TDI FPGA Arm=================== 15-12-21 22:06:45.485 -05 000000054 INF: ====================================== 15-12-21 22:06:45.494 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:06:45.496 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:06:45.496 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:45.504 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:45.506 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:45.507 -05 000000028 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:06:45.510 -05 000000028 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:06:45.510 -05 000000028 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:06:45.510 -05 000000028 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:06:45.510 -05 000000028 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:06:45.510 -05 000000081 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:06:45.514 -05 000000081 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:06:45.514 -05 000000081 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:06:45.514 -05 000000081 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:06:45.514 -05 000000081 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:06:45.666 -05 000000047 INF: FPGA: Recv EX1MV 15-12-21 22:06:45.666 -05 000000081 INF: Excitation Filter 1: Moved -36 steps in 152.1262 ms 15-12-21 22:06:45.666 -05 000000081 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 152.2867 ms 15-12-21 22:06:45.666 -05 000000081 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 152.3762 ms 15-12-21 22:06:45.667 -05 000000081 INF: ====================================== 15-12-21 22:06:45.706 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:45.706 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 22:06:45.918 -05 000000068 INF: FPGA: Recv EX2MV 15-12-21 22:06:45.919 -05 000000028 INF: Excitation Filter 2: Moved -107 steps in 408.3179 ms 15-12-21 22:06:45.919 -05 000000028 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 408.4557 ms 15-12-21 22:06:45.919 -05 000000028 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 408.5511 ms 15-12-21 22:06:45.920 -05 000000028 INF: ====================================== 15-12-21 22:06:45.926 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:45.928 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:06:45.939 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:45.950 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:06:45.991 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.596C:A1\r\n 15-12-21 22:06:45.995 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:46.000 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:06:46.000 -05 000000025 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:06:46.004 -05 000000048 INF: ===================Move Y Motor without settling=================== 15-12-21 22:06:46.004 -05 000000025 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:06:46.004 -05 000000048 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:06:46.004 -05 000000036 INF: ===================FPGA Z Wait=================== 15-12-21 22:06:46.007 -05 000000048 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:06:46.017 -05 000000024 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:06:46.023 -05 000000009 INF: ===================Camera TDI=================== 15-12-21 22:06:46.023 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:06:46.035 -05 000000036 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:06:46.035 -05 000000048 INF: Y Motor: Xmit 1G\n 15-12-21 22:06:46.111 -05 000000048 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:06:46.112 -05 000000048 INF: Y Motor: Recv 1G\r\n 15-12-21 22:06:46.113 -05 000000048 INF: Y Motor: Xmit 1D\n 15-12-21 22:06:46.199 -05 000000048 INF: Y Motor: Recv 1D\r\n 15-12-21 22:06:46.202 -05 000000048 INF: Y Motor: Recv *407662\r\n 15-12-21 22:06:46.203 -05 000000048 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:06:46.339 -05 000000023 INF: FPGA: Recv ZWAIT 15-12-21 22:06:46.340 -05 000000036 INF: ====================================== 15-12-21 22:06:46.477 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:46.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:46.546 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:46.571 -05 000000009 INF: ===================Frame #7=================== 15-12-21 22:06:46.572 -05 000000028 INF: ===================Frame #7=================== 15-12-21 22:06:46.681 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:46.691 -05 000000034 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106=================== 15-12-21 22:06:46.691 -05 000000044 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106=================== 15-12-21 22:06:46.706 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:46.706 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:06:46.722 -05 000000051 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109, Registering and Extracting C039 L001 T1110=================== 15-12-21 22:06:46.722 -05 000000027 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109, Registering and Extracting C039 L001 T1110=================== 15-12-21 22:06:46.722 -05 000000028 INF: ===================Frame #19=================== 15-12-21 22:06:46.722 -05 000000009 INF: ===================Frame #19=================== 15-12-21 22:06:46.745 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:46.745 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:46.796 -05 000000072 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109=================== 15-12-21 22:06:46.842 -05 000000040 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109, Registering and Extracting C039 L001 T1111=================== 15-12-21 22:06:46.870 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:46.872 -05 000000028 INF: ===================Frame #31=================== 15-12-21 22:06:46.873 -05 000000009 INF: ===================Frame #31=================== 15-12-21 22:06:46.932 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 18.063C:A1\r\n 15-12-21 22:06:46.932 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:47.014 -05 000000020 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109=================== 15-12-21 22:06:47.023 -05 000000009 INF: ===================Frame #43=================== 15-12-21 22:06:47.024 -05 000000028 INF: ===================Frame #43=================== 15-12-21 22:06:47.041 -05 000000077 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109, Registering and Extracting C039 L001 T1112=================== 15-12-21 22:06:47.049 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:47.059 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:47.059 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:47.174 -05 000000009 INF: ===================Frame #55=================== 15-12-21 22:06:47.174 -05 000000028 INF: ===================Frame #55=================== 15-12-21 22:06:47.246 -05 000000056 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109=================== 15-12-21 22:06:47.249 -05 000000038 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109, Registering and Extracting C039 L001 T1113=================== 15-12-21 22:06:47.326 -05 000000028 INF: ===================Frame #66=================== 15-12-21 22:06:47.326 -05 000000009 INF: ===================Frame #66=================== 15-12-21 22:06:47.343 -05 000000033 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109=================== 15-12-21 22:06:47.349 -05 000000066 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109, Registering and Extracting C039 L001 T1114=================== 15-12-21 22:06:47.405 -05 000000031 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109=================== 15-12-21 22:06:47.450 -05 000000011 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109, Registering and Extracting C039 L001 T1115=================== 15-12-21 22:06:47.485 -05 000000088 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109=================== 15-12-21 22:06:47.556 -05 000000060 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109, Registering and Extracting C039 L001 T1116=================== 15-12-21 22:06:47.713 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:47.713 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:06:48.191 -05 000000028 INF: ===================Frame #135=================== 15-12-21 22:06:48.191 -05 000000009 INF: ===================Frame #135=================== 15-12-21 22:06:48.343 -05 000000009 INF: ===================Frame #147=================== 15-12-21 22:06:48.343 -05 000000028 INF: ===================Frame #147=================== 15-12-21 22:06:48.364 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:48.431 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:06:48.431 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:48.494 -05 000000009 INF: ===================Frame #159=================== 15-12-21 22:06:48.494 -05 000000028 INF: ===================Frame #159=================== 15-12-21 22:06:48.530 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:48.568 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:48.568 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:48.694 -05 000000009 INF: ===================Frame #175=================== 15-12-21 22:06:48.694 -05 000000028 INF: ===================Frame #175=================== 15-12-21 22:06:48.707 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:48.707 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:48.707 -05 000000062 INF: WaitCommand(5000) end 15-12-21 22:06:48.708 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:48.709 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:48.710 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:06:48.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:48.746 -05 000000054 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:06:48.748 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:48.750 -05 000000092 INF: ===================WaitCommand=================== 15-12-21 22:06:48.751 -05 000000092 INF: WaitCommand(15000) start 15-12-21 22:06:48.754 -05 000000092 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:06:48.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:48.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:48.827 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:48.845 -05 000000009 INF: ===================Frame #187=================== 15-12-21 22:06:48.845 -05 000000028 INF: ===================Frame #187=================== 15-12-21 22:06:48.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:48.934 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:49.031 -05 000000028 INF: ===================Frame #201=================== 15-12-21 22:06:49.031 -05 000000009 INF: ===================Frame #201=================== 15-12-21 22:06:49.032 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:49.033 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:49.033 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:49.150 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:06:49.187 -05 000000028 INF: ===================Frame #213=================== 15-12-21 22:06:49.187 -05 000000009 INF: ===================Frame #213=================== 15-12-21 22:06:49.266 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 22:06:49.266 -05 000000054 INF: Current Position of Pump is: 4608 15-12-21 22:06:49.266 -05 000000054 INF: Dispense Steps 48000 is greater than steps to home syringe 4608, reducing number of steps to 4608 15-12-21 22:06:49.266 -05 000000054 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:06:49.337 -05 000000009 INF: ===================Frame #225=================== 15-12-21 22:06:49.337 -05 000000028 INF: ===================Frame #226=================== 15-12-21 22:06:49.366 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD4608R\r 15-12-21 22:06:49.443 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:49.488 -05 000000009 INF: ===================Frame #237=================== 15-12-21 22:06:49.543 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:49.588 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:49.639 -05 000000009 INF: ===================Frame #249=================== 15-12-21 22:06:49.757 -05 000000092 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:06:49.789 -05 000000009 INF: ===================Frame #261=================== 15-12-21 22:06:49.838 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:49.897 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:49.940 -05 000000009 INF: ===================Frame #273=================== 15-12-21 22:06:50.091 -05 000000009 INF: ===================Frame #285=================== 15-12-21 22:06:50.147 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:50.207 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:50.242 -05 000000009 INF: ===================Frame #297=================== 15-12-21 22:06:50.392 -05 000000009 INF: ===================Frame #309=================== 15-12-21 22:06:50.409 -05 000000028 INF: ===================Frame #310=================== 15-12-21 22:06:50.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:50.457 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:50.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:50.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:50.521 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:50.521 -05 000000054 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:06:50.522 -05 000000054 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:06:50.543 -05 000000009 INF: ===================Frame #321=================== 15-12-21 22:06:50.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:50.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:50.584 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:50.621 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:06:50.689 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:50.694 -05 000000009 INF: ===================Frame #333=================== 15-12-21 22:06:50.708 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:50.709 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:50.709 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:50.757 -05 000000092 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:06:50.757 -05 000000028 INF: ===================Frame #338=================== 15-12-21 22:06:50.810 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:50.844 -05 000000009 INF: ===================Frame #345=================== 15-12-21 22:06:50.893 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:06:50.983 -05 000000028 INF: ===================Frame #356=================== 15-12-21 22:06:50.996 -05 000000009 INF: ===================Frame #357=================== 15-12-21 22:06:51.111 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:51.155 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:06:51.156 -05 000000009 INF: ===================Frame #369=================== 15-12-21 22:06:51.157 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.131C:A1\r\n 15-12-21 22:06:51.157 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:51.189 -05 000000028 INF: ===================Frame #372=================== 15-12-21 22:06:51.206 -05 000000054 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:06:51.207 -05 000000054 INF: ====================================== 15-12-21 22:06:51.307 -05 000000009 INF: ===================Frame #381=================== 15-12-21 22:06:51.384 -05 000000028 INF: ===================Frame #387=================== 15-12-21 22:06:51.458 -05 000000009 INF: ===================Frame #393=================== 15-12-21 22:06:51.534 -05 000000028 INF: ===================Frame #399=================== 15-12-21 22:06:51.546 -05 000000040 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106, Registering and Extracting C039 L001 T1109=================== 15-12-21 22:06:51.609 -05 000000009 INF: ===================Frame #405=================== 15-12-21 22:06:51.686 -05 000000028 INF: ===================Frame #411=================== 15-12-21 22:06:51.758 -05 000000092 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:06:51.759 -05 000000027 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105, Registering and Extracting C039 L001 T1106=================== 15-12-21 22:06:51.760 -05 000000009 INF: ===================Frame #417=================== 15-12-21 22:06:51.838 -05 000000028 INF: ===================Frame #423=================== 15-12-21 22:06:51.911 -05 000000009 INF: ===================Frame #429=================== 15-12-21 22:06:51.932 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:51.958 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:51.958 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:51.989 -05 000000028 INF: ===================Frame #435=================== 15-12-21 22:06:52.028 -05 000000051 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104, Registering and Extracting C039 L001 T1105=================== 15-12-21 22:06:52.063 -05 000000009 INF: ===================Frame #441=================== 15-12-21 22:06:52.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:52.104 -05 000000077 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103, Registering and Extracting C039 L001 T1104=================== 15-12-21 22:06:52.140 -05 000000028 INF: ===================Frame #447=================== 15-12-21 22:06:52.144 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:52.144 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:52.214 -05 000000009 INF: ===================Frame #453=================== 15-12-21 22:06:52.249 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:52.268 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 16.940C:A1\r\n 15-12-21 22:06:52.268 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:52.291 -05 000000028 INF: ===================Frame #459=================== 15-12-21 22:06:52.316 -05 000000038 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102, Registering and Extracting C039 L001 T1103=================== 15-12-21 22:06:52.365 -05 000000009 INF: ===================Frame #465=================== 15-12-21 22:06:52.377 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:52.395 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:52.395 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:52.431 -05 000000066 INF: ===================Registering and Extracting C039 L001 T1101, Registering and Extracting C039 L001 T1102=================== 15-12-21 22:06:52.441 -05 000000028 INF: ===================Frame #471=================== 15-12-21 22:06:52.515 -05 000000009 INF: ===================Frame #477=================== 15-12-21 22:06:52.591 -05 000000028 INF: ===================Frame #483=================== 15-12-21 22:06:52.664 -05 000000060 INF: ===================Registering and Extracting C039 L001 T1101=================== 15-12-21 22:06:52.666 -05 000000009 INF: ===================Frame #489=================== 15-12-21 22:06:52.735 -05 000000011 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:06:52.741 -05 000000028 INF: ===================Frame #495=================== 15-12-21 22:06:52.759 -05 000000092 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:06:52.817 -05 000000009 INF: ===================Frame #501=================== 15-12-21 22:06:52.826 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:06:52.834 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:06:52.892 -05 000000028 INF: ===================Frame #506=================== 15-12-21 22:06:52.934 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:06:52.943 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:06:52.968 -05 000000009 INF: ===================Frame #512=================== 15-12-21 22:06:53.072 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:06:53.082 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:06:53.207 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:06:53.213 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:06:53.236 -05 000000028 INF: ===================Frame #534=================== 15-12-21 22:06:53.358 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:06:53.435 -05 000000028 INF: ===================Frame #549=================== 15-12-21 22:06:53.587 -05 000000028 INF: ===================Frame #561=================== 15-12-21 22:06:53.620 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:53.643 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:06:53.643 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:53.737 -05 000000028 INF: ===================Frame #573=================== 15-12-21 22:06:53.742 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:53.760 -05 000000092 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:06:53.767 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:53.767 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:53.828 -05 000000009 INF: ===================Frame #580=================== 15-12-21 22:06:53.870 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:53.887 -05 000000028 INF: ===================Frame #585=================== 15-12-21 22:06:53.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:53.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:53.997 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:54.037 -05 000000028 INF: ===================Frame #597=================== 15-12-21 22:06:54.076 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:54.076 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:54.122 -05 000000009 INF: ===================Frame #604=================== 15-12-21 22:06:54.189 -05 000000028 INF: ===================Frame #609=================== 15-12-21 22:06:54.321 -05 000000009 INF: ===================Frame #619=================== 15-12-21 22:06:54.339 -05 000000028 INF: ===================Frame #621=================== 15-12-21 22:06:54.471 -05 000000009 INF: ===================Frame #631=================== 15-12-21 22:06:54.489 -05 000000028 INF: ===================Frame #633=================== 15-12-21 22:06:54.597 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:06:54.623 -05 000000009 INF: ===================Frame #643=================== 15-12-21 22:06:54.639 -05 000000028 INF: ===================Frame #645=================== 15-12-21 22:06:54.761 -05 000000092 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:06:54.773 -05 000000009 INF: ===================Frame #655=================== 15-12-21 22:06:54.789 -05 000000028 INF: ===================Frame #656=================== 15-12-21 22:06:54.923 -05 000000009 INF: ===================Frame #667=================== 15-12-21 22:06:55.052 -05 000000028 INF: ===================Frame #677=================== 15-12-21 22:06:55.074 -05 000000009 INF: ===================Frame #679=================== 15-12-21 22:06:55.202 -05 000000028 INF: ===================Frame #689=================== 15-12-21 22:06:55.224 -05 000000009 INF: ===================Frame #691=================== 15-12-21 22:06:55.302 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:55.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:55.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:55.353 -05 000000028 INF: ===================Frame #701=================== 15-12-21 22:06:55.374 -05 000000009 INF: ===================Frame #703=================== 15-12-21 22:06:55.427 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:55.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:55.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:55.503 -05 000000028 INF: ===================Frame #713=================== 15-12-21 22:06:55.524 -05 000000009 INF: ===================Frame #715=================== 15-12-21 22:06:55.555 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:55.576 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:55.576 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:55.653 -05 000000028 INF: ===================Frame #725=================== 15-12-21 22:06:55.674 -05 000000009 INF: ===================Frame #726=================== 15-12-21 22:06:55.761 -05 000000092 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:06:55.803 -05 000000028 INF: ===================Frame #737=================== 15-12-21 22:06:55.945 -05 000000009 INF: ===================Frame #748=================== 15-12-21 22:06:55.954 -05 000000028 INF: ===================Frame #749=================== 15-12-21 22:06:56.104 -05 000000028 INF: ===================Frame #760=================== 15-12-21 22:06:56.119 -05 000000009 INF: ===================Frame #762=================== 15-12-21 22:06:56.266 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:06:56.290 -05 000000009 INF: ===================Frame #775=================== 15-12-21 22:06:56.325 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.838C:A1\r\n 15-12-21 22:06:56.325 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:56.389 -05 000000028 INF: ===================Frame #783=================== 15-12-21 22:06:56.440 -05 000000009 INF: ===================Frame #787=================== 15-12-21 22:06:56.539 -05 000000028 INF: ===================Frame #795=================== 15-12-21 22:06:56.591 -05 000000009 INF: ===================Frame #799=================== 15-12-21 22:06:56.690 -05 000000028 INF: ===================Frame #807=================== 15-12-21 22:06:56.742 -05 000000009 INF: ===================Frame #811=================== 15-12-21 22:06:56.764 -05 000000092 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:06:56.806 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:56.824 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:56.824 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:56.841 -05 000000028 INF: ===================Frame #819=================== 15-12-21 22:06:56.893 -05 000000009 INF: ===================Frame #823=================== 15-12-21 22:06:56.925 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:56.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:56.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:56.991 -05 000000028 INF: ===================Frame #831=================== 15-12-21 22:06:57.043 -05 000000009 INF: ===================Frame #835=================== 15-12-21 22:06:57.053 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:57.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:57.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:57.142 -05 000000028 INF: ===================Frame #842=================== 15-12-21 22:06:57.194 -05 000000009 INF: ===================Frame #847=================== 15-12-21 22:06:57.345 -05 000000009 INF: ===================Frame #858=================== 15-12-21 22:06:57.377 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:06:57.391 -05 000000028 INF: ===================Frame #862=================== 15-12-21 22:06:57.449 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.089C:A1\r\n 15-12-21 22:06:57.449 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:57.584 -05 000000028 INF: ===================Frame #877=================== 15-12-21 22:06:57.654 -05 000000009 INF: ===================Frame #883=================== 15-12-21 22:06:57.734 -05 000000028 INF: ===================Frame #889=================== 15-12-21 22:06:57.764 -05 000000092 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:06:57.804 -05 000000009 INF: ===================Frame #895=================== 15-12-21 22:06:57.885 -05 000000028 INF: ===================Frame #901=================== 15-12-21 22:06:57.954 -05 000000009 INF: ===================Frame #907=================== 15-12-21 22:06:58.035 -05 000000028 INF: ===================Frame #913=================== 15-12-21 22:06:58.105 -05 000000009 INF: ===================Frame #919=================== 15-12-21 22:06:58.185 -05 000000028 INF: ===================Frame #925=================== 15-12-21 22:06:58.255 -05 000000009 INF: ===================Frame #931=================== 15-12-21 22:06:58.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:58.322 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:58.322 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:58.335 -05 000000028 INF: ===================Frame #937=================== 15-12-21 22:06:58.407 -05 000000009 INF: ===================Frame #942=================== 15-12-21 22:06:58.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:58.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:58.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:58.486 -05 000000028 INF: ===================Frame #949=================== 15-12-21 22:06:58.549 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:06:58.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:58.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:58.636 -05 000000028 INF: ===================Frame #961=================== 15-12-21 22:06:58.656 -05 000000009 INF: ===================Frame #962=================== 15-12-21 22:06:58.742 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:06:58.757 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 22:06:58.757 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:58.764 -05 000000092 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:06:58.786 -05 000000028 INF: ===================Frame #972=================== 15-12-21 22:06:58.833 -05 000000009 INF: ===================Frame #976=================== 15-12-21 22:06:59.019 -05 000000009 INF: ===================Frame #991=================== 15-12-21 22:06:59.101 -05 000000028 INF: ===================Frame #997=================== 15-12-21 22:06:59.169 -05 000000009 INF: ===================Frame #1003=================== 15-12-21 22:06:59.252 -05 000000028 INF: ===================Frame #1009=================== 15-12-21 22:06:59.320 -05 000000009 INF: ===================Frame #1015=================== 15-12-21 22:06:59.403 -05 000000028 INF: ===================Frame #1021=================== 15-12-21 22:06:59.470 -05 000000009 INF: ===================Frame #1027=================== 15-12-21 22:06:59.554 -05 000000028 INF: ===================Frame #1033=================== 15-12-21 22:06:59.623 -05 000000009 INF: ===================Frame #1038=================== 15-12-21 22:06:59.704 -05 000000028 INF: ===================Frame #1045=================== 15-12-21 22:06:59.764 -05 000000092 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:06:59.793 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:06:59.821 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:06:59.821 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:06:59.855 -05 000000028 INF: ===================Frame #1057=================== 15-12-21 22:06:59.859 -05 000000009 INF: ===================Frame #1057=================== 15-12-21 22:06:59.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:06:59.945 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:06:59.945 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:00.005 -05 000000028 INF: ===================Frame #1069=================== 15-12-21 22:07:00.009 -05 000000009 INF: ===================Frame #1069=================== 15-12-21 22:07:00.048 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:00.069 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:00.069 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:00.158 -05 000000028 INF: ===================Frame #1081=================== 15-12-21 22:07:00.159 -05 000000009 INF: ===================Frame #1081=================== 15-12-21 22:07:00.308 -05 000000028 INF: ===================Frame #1093=================== 15-12-21 22:07:00.309 -05 000000009 INF: ===================Frame #1093=================== 15-12-21 22:07:00.458 -05 000000028 INF: ===================Frame #1105=================== 15-12-21 22:07:00.459 -05 000000009 INF: ===================Frame #1105=================== 15-12-21 22:07:00.608 -05 000000028 INF: ===================Frame #1117=================== 15-12-21 22:07:00.609 -05 000000009 INF: ===================Frame #1117=================== 15-12-21 22:07:00.758 -05 000000028 INF: ===================Frame #1128=================== 15-12-21 22:07:00.759 -05 000000009 INF: ===================Frame #1128=================== 15-12-21 22:07:00.764 -05 000000092 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:07:01.051 -05 000000009 INF: ===================Frame #1152=================== 15-12-21 22:07:01.127 -05 000000028 INF: ===================Frame #1158=================== 15-12-21 22:07:01.231 -05 000000009 INF: ===================Frame #1166=================== 15-12-21 22:07:01.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:01.309 -05 000000028 INF: ===================Frame #1172=================== 15-12-21 22:07:01.317 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:01.317 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:01.398 -05 000000009 INF: ===================Frame #1179=================== 15-12-21 22:07:01.417 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:01.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:01.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:01.477 -05 000000028 INF: ===================Frame #1185=================== 15-12-21 22:07:01.545 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:01.548 -05 000000009 INF: ===================Frame #1191=================== 15-12-21 22:07:01.565 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.331C:A1\r\n 15-12-21 22:07:01.565 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:01.627 -05 000000028 INF: ===================Frame #1197=================== 15-12-21 22:07:01.669 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:01.692 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:01.692 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:01.698 -05 000000009 INF: ===================Frame #1203=================== 15-12-21 22:07:01.765 -05 000000092 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:07:01.778 -05 000000028 INF: ===================Frame #1209=================== 15-12-21 22:07:01.849 -05 000000009 INF: ===================Frame #1215=================== 15-12-21 22:07:01.928 -05 000000028 INF: ===================Frame #1221=================== 15-12-21 22:07:01.999 -05 000000009 INF: ===================Frame #1226=================== 15-12-21 22:07:02.080 -05 000000028 INF: ===================Frame #1233=================== 15-12-21 22:07:02.220 -05 000000009 INF: ===================Frame #1244=================== 15-12-21 22:07:02.230 -05 000000028 INF: ===================Frame #1245=================== 15-12-21 22:07:02.315 -05 000000063 INF: FPGA: Recv TDIYWAIT 15-12-21 22:07:02.315 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:02.320 -05 000000025 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:07:02.321 -05 000000087 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:07:02.321 -05 000000087 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:07:02.321 -05 000000087 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:07:02.321 -05 000000087 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:07:02.321 -05 000000087 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:07:02.322 -05 000000079 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:07:02.322 -05 000000079 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:07:02.324 -05 000000079 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:07:02.324 -05 000000079 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:07:02.324 -05 000000079 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:07:02.380 -05 000000028 INF: ===================Frame #1250=================== 15-12-21 22:07:02.392 -05 000000009 INF: ===================Frame #1250=================== 15-12-21 22:07:02.403 -05 000000009 INF: Camera complete - got 1250 frames. 15-12-21 22:07:02.404 -05 000000009 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:07:02.484 -05 000000028 INF: Camera complete - got 1250 frames. 15-12-21 22:07:02.486 -05 000000028 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:07:02.501 -05 000000055 INF: FPGA: Recv EX1MV 15-12-21 22:07:02.501 -05 000000079 INF: Excitation Filter 1: Moved 36 steps in 177.029 ms 15-12-21 22:07:02.501 -05 000000079 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 177.2029 ms 15-12-21 22:07:02.501 -05 000000079 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 179.295 ms 15-12-21 22:07:02.502 -05 000000079 INF: ====================================== 15-12-21 22:07:02.529 -05 000000009 INF: ===================Camera TDI=================== 15-12-21 22:07:02.550 -05 000000009 INF: ====================================== 15-12-21 22:07:02.558 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:02.628 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.471C:A1\r\n 15-12-21 22:07:02.628 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:02.646 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:07:02.667 -05 000000028 INF: ====================================== 15-12-21 22:07:02.668 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:07:02.673 -05 000000024 INF: ====================================== 15-12-21 22:07:02.726 -05 000000058 INF: FPGA: Recv EX2MV 15-12-21 22:07:02.727 -05 000000087 INF: Excitation Filter 2: Moved 107 steps in 405.4664 ms 15-12-21 22:07:02.727 -05 000000087 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 405.569 ms 15-12-21 22:07:02.727 -05 000000087 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 405.6835 ms 15-12-21 22:07:02.747 -05 000000087 INF: ====================================== 15-12-21 22:07:02.762 -05 000000025 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:02.771 -05 000000092 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:07:02.784 -05 000000025 INF: ====================================== 15-12-21 22:07:03.257 -05 000000048 INF: Y Motor: Moved to 9.0765 after 17053 ms 15-12-21 22:07:03.272 -05 000000048 INF: ====================================== 15-12-21 22:07:03.280 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:03.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:03.289 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.290 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:07:03.309 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:03.359 -05 000000061 INF: FPGA: Recv TDICLINES 10442 15-12-21 22:07:03.359 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:07:03.420 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:03.420 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:03.458 -05 000000068 INF: FPGA: Recv TDIYERD 907654 15-12-21 22:07:03.458 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:07:03.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:03.527 -05 000000087 INF: FPGA: Recv ZADCR 37386 15-12-21 22:07:03.527 -05 000000057 INF: At scan end Y pos = 9.077 and Z pos = -0.142. Y moved -60.303 mm 15-12-21 22:07:03.527 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:07:03.578 -05 000000068 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:07:03.578 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:07:03.578 -05 000000057 INF: TDIScan finished after 22139.5353 ms 15-12-21 22:07:03.578 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:07:03.578 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:07:03.583 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:03.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:03.611 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.324 um 15-12-21 22:07:03.611 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.614 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.619 -05 000000054 INF: ===================Dither Clean Up Command=================== 15-12-21 22:07:03.619 -05 000000078 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:07:03.619 -05 000000023 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:07:03.619 -05 000000078 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:07:03.619 -05 000000055 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:07:03.619 -05 000000078 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:07:03.620 -05 000000023 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:07:03.620 -05 000000036 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:07:03.620 -05 000000024 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:03.625 -05 000000024 INF: ===================LFT:Extracting coords=================== 15-12-21 22:07:03.637 -05 000000036 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:07:03.641 -05 000000025 INF: FPGA: Recv ZSTEP 15-12-21 22:07:03.642 -05 000000078 INF: ====================================== 15-12-21 22:07:03.664 -05 000000024 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:03.669 -05 000000024 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:07:03.670 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:03.673 -05 000000061 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:03.679 -05 000000082 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:03.679 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:03.680 -05 000000061 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:03.680 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:03.682 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:03.682 -05 000000068 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:03.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:03.714 -05 000000049 INF: FPGA: Recv ZSEL 15-12-21 22:07:03.714 -05 000000036 INF: FPGA: Xmit ZDACW 42513\n 15-12-21 22:07:03.718 -05 000000023 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:07:03.719 -05 000000055 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:07:03.719 -05 000000023 INF: ====================================== 15-12-21 22:07:03.758 -05 000000092 INF: ===================WaitCommand=================== 15-12-21 22:07:03.758 -05 000000092 INF: WaitCommand(15000) end 15-12-21 22:07:03.759 -05 000000092 INF: ====================================== 15-12-21 22:07:03.763 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:07:03.763 -05 000000064 INF: FPGA: Recv ZDACW 15-12-21 22:07:03.763 -05 000000036 INF: ====================================== 15-12-21 22:07:03.764 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:07:03.765 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:07:03.765 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle=================== 15-12-21 22:07:03.772 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:03.772 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:03.773 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:03.773 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:03.781 -05 000000055 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:07:03.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:03.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:03.782 -05 000000055 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:07:03.783 -05 000000055 INF: ====================================== 15-12-21 22:07:03.843 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:03.843 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent CWM (8)=================== 15-12-21 22:07:03.843 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:03.843 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:07:03.861 -05 000000082 INF: LFT found best fwhm score 2.768923 in 140 ms 15-12-21 22:07:03.861 -05 000000082 INF: LFT found good score at index 3621 with fwhm value 2.768923. Next cycle, cycle 40 starting Z position for top surface is at -0.164 mm FC:A, C:39,L:1,T 15-12-21 22:07:03.862 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:03.862 -05 000000045 INF: LFT found best fwhm score 2.895261 in 138 ms 15-12-21 22:07:03.862 -05 000000045 INF: LFT found good score at index 6661 with fwhm value 2.895261. Next cycle, cycle 40 starting Z position for top surface is at -0.163 mm FC:A, C:39,L:1,T 15-12-21 22:07:03.862 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:03.862 -05 000000082 INF: ====================================== 15-12-21 22:07:03.862 -05 000000045 INF: ====================================== 15-12-21 22:07:03.865 -05 000000061 INF: LFT found best fwhm score 2.458746 in 142 ms 15-12-21 22:07:03.865 -05 000000061 INF: LFT found good score at index 2341 with fwhm value 2.458746. Next cycle, cycle 40 starting Z position for top surface is at -0.164 mm FC:A, C:39,L:1,T 15-12-21 22:07:03.865 -05 000000068 INF: LFT found best fwhm score 2.638466 in 140 ms 15-12-21 22:07:03.865 -05 000000068 INF: LFT found good score at index 3081 with fwhm value 2.638466. Next cycle, cycle 40 starting Z position for top surface is at -0.164 mm FC:A, C:39,L:1,T 15-12-21 22:07:03.865 -05 000000061 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:03.865 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:03.866 -05 000000061 INF: ====================================== 15-12-21 22:07:03.866 -05 000000068 INF: ====================================== 15-12-21 22:07:03.866 -05 000000024 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:03.869 -05 000000024 INF: LFT weighted average best Z for top surface is at -0.164mm FC:A, C:39,L:1,T 15-12-21 22:07:03.870 -05 000000024 INF: ====================================== 15-12-21 22:07:03.875 -05 000000054 INF: ====================================== 15-12-21 22:07:03.878 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:07:03.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:07:03.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:07:03.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:07:03.882 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:03.882 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:07:03.882 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:07:03.883 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:07:03.883 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:07:03.883 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve, Waiting for image analysis=================== 15-12-21 22:07:03.883 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:07:03.883 -05 000000057 INF: Waited 0 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 15-12-21 22:07:03.884 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:07:03.884 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:07:03.884 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:03.885 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:07:03.885 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 1=================== 15-12-21 22:07:03.887 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface=================== 15-12-21 22:07:03.893 -05 000000011 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204=================== 15-12-21 22:07:03.893 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:03.894 -05 000000077 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205=================== 15-12-21 22:07:03.894 -05 000000066 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204=================== 15-12-21 22:07:03.894 -05 000000051 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1207=================== 15-12-21 22:07:03.896 -05 000000040 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206=================== 15-12-21 22:07:03.896 -05 000000027 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1207, Registering and Extracting C039 L001 T1208=================== 15-12-21 22:07:03.898 -05 000000038 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204=================== 15-12-21 22:07:03.898 -05 000000060 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204=================== 15-12-21 22:07:03.908 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:07:03.910 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:03.969 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:03.970 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:03.971 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:03.979 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:03.981 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:03.982 -05 000000057 INF: Compensator: Remaining IntoPath 15-12-21 22:07:03.984 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:03.989 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:04.059 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:04.060 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:07:04.061 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:07:04.085 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:04.085 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:07:04.086 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:04.086 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -162.2 um, section = B_1 15-12-21 22:07:04.089 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:04.090 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:04.092 -05 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:04.092 -05 000000063 INF: ===================Move X,Y=================== 15-12-21 22:07:04.093 -05 000000036 INF: ===================MoveEmissionFilters=================== 15-12-21 22:07:04.093 -05 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:07:04.200 -05 000000037 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:07:04.200 -05 000000037 INF: Z Motor: Moving to -0.1627 mm, started at -0.1622 mm 15-12-21 22:07:04.200 -05 000000037 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:07:04.200 -05 000000063 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:07:04.201 -05 000000043 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:07:04.201 -05 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:07:04.201 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:07:04.201 -05 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:07:04.202 -05 000000082 INF: ===================Move Y Motor without settling=================== 15-12-21 22:07:04.202 -05 000000028 INF: ===================Move X Motor without settling=================== 15-12-21 22:07:04.202 -05 000000082 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:07:04.202 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:07:04.202 -05 000000043 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:07:04.202 -05 000000082 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:07:04.202 -05 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:07:04.203 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:07:04.203 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:04.203 -05 000000082 INF: Y Motor: Xmit 1G\n 15-12-21 22:07:04.203 -05 000000041 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:07:04.204 -05 000000025 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:07:04.204 -05 000000081 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:07:04.204 -05 000000079 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:07:04.204 -05 000000058 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:07:04.204 -05 000000025 INF: ====================================== 15-12-21 22:07:04.204 -05 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:07:04.205 -05 000000087 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:07:04.205 -05 000000058 INF: ====================================== 15-12-21 22:07:04.205 -05 000000079 INF: ====================================== 15-12-21 22:07:04.206 -05 000000041 INF: ====================================== 15-12-21 22:07:04.206 -05 000000028 INF: X Motor: Xmit PR VM\n 15-12-21 22:07:04.206 -05 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:07:04.206 -05 000000081 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:07:04.207 -05 000000081 INF: ====================================== 15-12-21 22:07:04.207 -05 000000029 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:07:04.207 -05 000000045 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:07:04.207 -05 000000087 INF: ====================================== 15-12-21 22:07:04.236 -05 000000045 INF: ====================================== 15-12-21 22:07:04.239 -05 000000029 INF: ====================================== 15-12-21 22:07:04.240 -05 000000043 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:07:04.243 -05 000000074 INF: ====================================== 15-12-21 22:07:04.248 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:07:04.250 -05 000000064 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:07:04.252 -05 000000043 INF: ====================================== 15-12-21 22:07:04.254 -05 000000068 INF: ====================================== 15-12-21 22:07:04.255 -05 000000064 INF: ====================================== 15-12-21 22:07:04.257 -05 000000036 INF: ====================================== 15-12-21 22:07:04.291 -05 000000009 INF: FPGA: Recv ZTRG 15-12-21 22:07:04.291 -05 000000037 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:07:04.292 -05 000000082 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:07:04.293 -05 000000028 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:07:04.293 -05 000000028 INF: X Motor: Xmit PR VI\n 15-12-21 22:07:04.293 -05 000000082 INF: Y Motor: Recv 1G\r\n 15-12-21 22:07:04.296 -05 000000082 INF: Y Motor: Xmit 1D\n 15-12-21 22:07:04.355 -05 000000029 INF: FPGA: Recv ZYT 15-12-21 22:07:04.355 -05 000000037 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:07:04.355 -05 000000037 INF: FPGA: Xmit ZMV 42654\n 15-12-21 22:07:04.356 -05 000000028 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:07:04.356 -05 000000028 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:07:04.356 -05 000000028 INF: X Motor: Moving to 17.1670 mm @15.000 mm/sec, started at 13.6436 mm 15-12-21 22:07:04.372 -05 000000028 INF: X Motor: Xmit MA -17135\n 15-12-21 22:07:04.373 -05 000000082 INF: Y Motor: Recv 1D\r\n 15-12-21 22:07:04.407 -05 000000082 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:07:04.407 -05 000000009 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 22:07:04.407 -05 000000009 INF: FPGA: Recv ZMV 15-12-21 22:07:04.407 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 22:07:04.408 -05 000000037 INF: Z Motor: MoveAndTrigger 'ZMV' command took 52.6872 ms 15-12-21 22:07:04.408 -05 000000037 INF: FPGA: Xmit ZDACR\n 15-12-21 22:07:04.411 -05 000000082 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:07:04.443 -05 000000028 INF: X Motor: Recv MA -17135\r\n> 15-12-21 22:07:04.443 -05 000000028 INF: X Motor: WaitUntilStopped 60235 15-12-21 22:07:04.468 -05 000000068 INF: FPGA: Recv ZDACR 42654 15-12-21 22:07:04.471 -05 000000037 INF: Z Motor: MoveAndTrigger took 271.284 ms w/comms 15-12-21 22:07:04.471 -05 000000037 INF: Z Motor: After move to -0.1627, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:07:04.471 -05 000000037 INF: Z Motor: MoveAbsStepped took 271.4153 ms 15-12-21 22:07:04.494 -05 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:04.530 -05 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:07:04.563 -05 000000047 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:04.563 -05 000000029 INF: ===================Camera Arm TDI=================== 15-12-21 22:07:04.573 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:04.580 -05 000000047 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:07:04.580 -05 000000047 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:07:04.583 -05 000000047 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:07:04.597 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:07:04.637 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:07:04.637 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:04.693 -05 000000043 INF: FPGA: Recv ZSEL 15-12-21 22:07:04.697 -05 000000047 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:07:04.700 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:04.713 -05 000000047 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:07:04.716 -05 000000047 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:07:04.716 -05 000000047 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:07:04.750 -05 000000084 INF: FPGA: Recv ZSTEP 15-12-21 22:07:04.752 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:04.756 -05 000000047 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:07:04.757 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:04.851 -05 000000047 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:07:04.852 -05 000000047 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:07:04.852 -05 000000047 INF: Z Motor: Arming to move to -0.1227 mm 15-12-21 22:07:04.852 -05 000000047 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:07:04.888 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:04.905 -05 000000092 INF: FPGA: Recv ZYT 15-12-21 22:07:04.905 -05 000000047 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1169248 enc / 11.692 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:07:04.905 -05 000000047 INF: FPGA: Xmit ZARM 32169\n 15-12-21 22:07:05.013 -05 000000061 INF: FPGA: Recv ZARM 15-12-21 22:07:05.013 -05 000000047 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 107.8024 ms 15-12-21 22:07:05.013 -05 000000047 INF: Z Motor: ArmAbsStepped took 161.2332 ms 15-12-21 22:07:05.014 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:05.017 -05 000000047 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:05.034 -05 000000047 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:07:05.035 -05 000000047 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:05.045 -05 000000047 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:07:05.046 -05 000000047 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:05.047 -05 000000047 INF: ====================================== 15-12-21 22:07:05.095 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:05.095 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:07:05.095 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:05.174 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:05.230 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:07:05.248 -05 000000028 INF: X Motor: Xmit PR ER\n 15-12-21 22:07:05.274 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:07:05.342 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:07:05.342 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 22:07:05.342 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:07:05.343 -05 000000028 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:07:05.343 -05 000000028 INF: X Motor: Moved to 17.1665 after 900 ms 15-12-21 22:07:05.343 -05 000000028 INF: ====================================== 15-12-21 22:07:05.371 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:05.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:05.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:05.443 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P18240R\r 15-12-21 22:07:05.584 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:05.629 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:05.684 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:05.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:05.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:05.763 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:05.814 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:05.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:05.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:06.013 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:06.075 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:06.291 -05 000000029 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:07:06.291 -05 000000029 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:07:06.291 -05 000000029 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:07:06.325 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:06.387 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:06.637 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:06.703 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:06.704 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:06.806 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.993C:A1\r\n 15-12-21 22:07:06.806 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:06.954 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:07.064 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:07.188 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:07.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:07.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:07.314 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:07.357 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:07.369 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:07.432 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:07.432 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:07.541 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:07.558 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:07.558 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:07.619 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:07.681 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:07.823 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:07.871 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.944C:A1\r\n 15-12-21 22:07:07.871 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:07.883 -05 000000029 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:07:07.883 -05 000000029 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:07:07.883 -05 000000029 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:07:07.885 -05 000000029 INF: ====================================== 15-12-21 22:07:07.894 -05 000000037 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:07.897 -05 000000037 INF: ====================================== 15-12-21 22:07:07.931 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:08.000 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:08.183 -05 000000082 INF: Y Motor: Moved to 70.6885 after 3772 ms 15-12-21 22:07:08.184 -05 000000082 INF: ====================================== 15-12-21 22:07:08.187 -05 000000063 INF: ===================Move X,Y=================== 15-12-21 22:07:08.196 -05 000000063 INF: ====================================== 15-12-21 22:07:08.198 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:08.205 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:08.205 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:07:08.243 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:07:08.244 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:07:08.250 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:08.303 -05 000000078 INF: FPGA: Recv ZFREQCL 15-12-21 22:07:08.304 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:08.304 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:07:08.304 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:08.304 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:07:08.365 -05 000000065 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:07:08.365 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:07:08.366 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:08.367 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:08.369 -05 000000055 INF: ===================TDI FPGA Arm=================== 15-12-21 22:07:08.369 -05 000000082 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:07:08.369 -05 000000082 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:07:08.378 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:08.383 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:07:08.384 -05 000000055 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:07:08.430 -05 000000043 INF: FPGA: Recv TDIYPOS 15-12-21 22:07:08.431 -05 000000082 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:07:08.431 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:08.432 -05 000000082 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:07:08.432 -05 000000082 INF: ====================================== 15-12-21 22:07:08.441 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:07:08.441 -05 000000055 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:07:08.492 -05 000000022 INF: FPGA: Recv TDIYARM3 15-12-21 22:07:08.493 -05 000000055 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:08.494 -05 000000055 INF: ===================TDI FPGA Arm=================== 15-12-21 22:07:08.501 -05 000000055 INF: ====================================== 15-12-21 22:07:08.504 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:08.505 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:08.505 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:08.509 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:08.521 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:08.523 -05 000000041 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:07:08.523 -05 000000025 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:07:08.523 -05 000000041 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:07:08.523 -05 000000041 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:07:08.526 -05 000000041 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:07:08.527 -05 000000041 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:07:08.529 -05 000000025 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:07:08.529 -05 000000025 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:07:08.529 -05 000000025 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:07:08.530 -05 000000025 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:07:08.554 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:08.617 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:08.681 -05 000000024 INF: FPGA: Recv EX1MV 15-12-21 22:07:08.682 -05 000000025 INF: Excitation Filter 1: Moved -36 steps in 152.0772 ms 15-12-21 22:07:08.682 -05 000000025 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 152.2801 ms 15-12-21 22:07:08.682 -05 000000025 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 155.2528 ms 15-12-21 22:07:08.683 -05 000000025 INF: ====================================== 15-12-21 22:07:08.887 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:08.887 -05 000000058 INF: FPGA: Recv EX2MV 15-12-21 22:07:08.887 -05 000000041 INF: Excitation Filter 2: Moved -107 steps in 360.6072 ms 15-12-21 22:07:08.887 -05 000000041 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 363.8943 ms 15-12-21 22:07:08.887 -05 000000041 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 364.0031 ms 15-12-21 22:07:08.890 -05 000000041 INF: ====================================== 15-12-21 22:07:08.893 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:08.902 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:08.905 -05 000000045 INF: ===================FPGA Z Wait=================== 15-12-21 22:07:08.905 -05 000000045 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:07:08.905 -05 000000092 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:08.910 -05 000000025 INF: ===================Camera TDI=================== 15-12-21 22:07:08.910 -05 000000029 INF: ===================Move Y Motor without settling=================== 15-12-21 22:07:08.911 -05 000000029 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:07:08.911 -05 000000029 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:07:08.912 -05 000000029 INF: Y Motor: Xmit 1G\n 15-12-21 22:07:08.912 -05 000000025 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:07:08.913 -05 000000092 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:07:08.913 -05 000000092 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:07:08.915 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:07:08.915 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:07:08.947 -05 000000029 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:07:08.947 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:08.948 -05 000000029 INF: Y Motor: Recv 1G\r\n 15-12-21 22:07:08.949 -05 000000029 INF: Y Motor: Xmit 1D\n 15-12-21 22:07:08.971 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:09.007 -05 000000029 INF: Y Motor: Recv 1D\r\n 15-12-21 22:07:09.008 -05 000000029 INF: Y Motor: Recv *407662\r\n 15-12-21 22:07:09.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:09.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:09.009 -05 000000029 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:07:09.209 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:09.211 -05 000000041 INF: FPGA: Recv ZWAIT 15-12-21 22:07:09.246 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:09.246 -05 000000045 INF: ====================================== 15-12-21 22:07:09.278 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:09.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:09.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:09.417 -05 000000024 INF: ===================Frame #4=================== 15-12-21 22:07:09.417 -05 000000028 INF: ===================Frame #4=================== 15-12-21 22:07:09.460 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:09.500 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:09.501 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:09.549 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:09.623 -05 000000024 INF: ===================Frame #21=================== 15-12-21 22:07:09.623 -05 000000028 INF: ===================Frame #20=================== 15-12-21 22:07:09.680 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:09.703 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:09.742 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:07:09.742 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:09.773 -05 000000024 INF: ===================Frame #33=================== 15-12-21 22:07:09.880 -05 000000038 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1207=================== 15-12-21 22:07:09.900 -05 000000066 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206=================== 15-12-21 22:07:09.903 -05 000000028 INF: ===================Frame #43=================== 15-12-21 22:07:09.922 -05 000000088 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1209=================== 15-12-21 22:07:09.922 -05 000000031 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1209, Registering and Extracting C039 L001 T1210=================== 15-12-21 22:07:09.924 -05 000000024 INF: ===================Frame #44=================== 15-12-21 22:07:09.930 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:09.989 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:09.989 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:07:10.027 -05 000000011 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1209=================== 15-12-21 22:07:10.055 -05 000000028 INF: ===================Frame #55=================== 15-12-21 22:07:10.090 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:07:10.125 -05 000000072 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1209, Registering and Extracting C039 L001 T1211=================== 15-12-21 22:07:10.135 -05 000000040 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1209=================== 15-12-21 22:07:10.177 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 22:07:10.177 -05 000000062 INF: Current Position of Pump is: 18240 15-12-21 22:07:10.177 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:07:10.193 -05 000000077 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206=================== 15-12-21 22:07:10.200 -05 000000024 INF: ===================Frame #66=================== 15-12-21 22:07:10.205 -05 000000028 INF: ===================Frame #67=================== 15-12-21 22:07:10.225 -05 000000020 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212, Registering and Extracting C039 L001 T1213=================== 15-12-21 22:07:10.225 -05 000000044 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212, Registering and Extracting C039 L001 T1213=================== 15-12-21 22:07:10.277 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:07:10.296 -05 000000060 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212=================== 15-12-21 22:07:10.324 -05 000000034 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212, Registering and Extracting C039 L001 T1214=================== 15-12-21 22:07:10.356 -05 000000028 INF: ===================Frame #79=================== 15-12-21 22:07:10.365 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:10.379 -05 000000051 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212=================== 15-12-21 22:07:10.425 -05 000000033 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212, Registering and Extracting C039 L001 T1215=================== 15-12-21 22:07:10.429 -05 000000027 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212=================== 15-12-21 22:07:10.465 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:10.508 -05 000000028 INF: ===================Frame #91=================== 15-12-21 22:07:10.508 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:10.508 -05 000000024 INF: ===================Frame #91=================== 15-12-21 22:07:10.525 -05 000000056 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212, Registering and Extracting C039 L001 T1216=================== 15-12-21 22:07:10.659 -05 000000028 INF: ===================Frame #103=================== 15-12-21 22:07:10.659 -05 000000024 INF: ===================Frame #103=================== 15-12-21 22:07:10.758 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:10.796 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:10.796 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:10.797 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:07:10.809 -05 000000028 INF: ===================Frame #114=================== 15-12-21 22:07:10.809 -05 000000024 INF: ===================Frame #114=================== 15-12-21 22:07:10.940 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:11.005 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:07:11.005 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:11.149 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:11.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:11.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:11.307 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:07:11.341 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:07:11.341 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:11.427 -05 000000024 INF: ===================Frame #163=================== 15-12-21 22:07:11.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:11.534 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:11.534 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:11.577 -05 000000024 INF: ===================Frame #175=================== 15-12-21 22:07:11.665 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:11.730 -05 000000024 INF: ===================Frame #187=================== 15-12-21 22:07:11.740 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:07:11.740 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:11.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:11.864 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:11.864 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:11.865 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:11.872 -05 000000028 INF: ===================Frame #198=================== 15-12-21 22:07:11.880 -05 000000024 INF: ===================Frame #199=================== 15-12-21 22:07:11.925 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:11.925 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 125ms 15-12-21 22:07:11.991 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:12.028 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:12.030 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:12.030 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent USB (6)=================== 15-12-21 22:07:12.030 -05 000000024 INF: ===================Frame #211=================== 15-12-21 22:07:12.030 -05 000000062 INF: Valve B2: Go to position 6 15-12-21 22:07:12.030 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:07:12.057 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.530C:A1\r\n 15-12-21 22:07:12.057 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:12.091 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 8\r 15-12-21 22:07:12.091 -05 000000062 INF: Valve B2: 34.157 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:07:12.091 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 8 to 6 15-12-21 22:07:12.091 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC6\r 15-12-21 22:07:12.092 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:07:12.092 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:07:12.215 -05 000000024 INF: ===================Frame #225=================== 15-12-21 22:07:12.366 -05 000000024 INF: ===================Frame #237=================== 15-12-21 22:07:12.532 -05 000000024 INF: ===================Frame #250=================== 15-12-21 22:07:12.593 -05 000000028 INF: ===================Frame #255=================== 15-12-21 22:07:12.659 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 6\r 15-12-21 22:07:12.659 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:12.660 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:07:12.660 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:12.726 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:07:12.726 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:12.744 -05 000000028 INF: ===================Frame #267=================== 15-12-21 22:07:12.849 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:07:12.895 -05 000000028 INF: ===================Frame #279=================== 15-12-21 22:07:12.909 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:07:12.909 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:13.013 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:13.046 -05 000000028 INF: ===================Frame #291=================== 15-12-21 22:07:13.197 -05 000000028 INF: ===================Frame #303=================== 15-12-21 22:07:13.260 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:13.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 22:07:13.261 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:13.261 -05 000000024 INF: ===================Frame #308=================== 15-12-21 22:07:13.345 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:13.348 -05 000000028 INF: ===================Frame #315=================== 15-12-21 22:07:13.353 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 6, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 140, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:07:13.390 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:13.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:13.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:13.450 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:07:13.498 -05 000000028 INF: ===================Frame #327=================== 15-12-21 22:07:13.509 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:13.532 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 22:07:13.532 -05 000000062 INF: Current Position of Pump is: 18240 15-12-21 22:07:13.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:13.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:13.533 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6), Aspirating port PortB=================== 15-12-21 22:07:13.633 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P26880R\r 15-12-21 22:07:13.637 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:13.643 -05 000000024 INF: ===================Frame #338=================== 15-12-21 22:07:13.648 -05 000000028 INF: ===================Frame #339=================== 15-12-21 22:07:13.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:13.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:13.720 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:13.798 -05 000000028 INF: ===================Frame #351=================== 15-12-21 22:07:13.820 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:13.908 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:13.912 -05 000000024 INF: ===================Frame #360=================== 15-12-21 22:07:13.948 -05 000000028 INF: ===================Frame #363=================== 15-12-21 22:07:14.099 -05 000000028 INF: ===================Frame #374=================== 15-12-21 22:07:14.141 -05 000000024 INF: ===================Frame #378=================== 15-12-21 22:07:14.162 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:14.218 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:14.464 -05 000000024 INF: ===================Frame #403=================== 15-12-21 22:07:14.468 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:14.531 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:14.600 -05 000000088 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205, Registering and Extracting C039 L001 T1206, Registering and Extracting C039 L001 T1212=================== 15-12-21 22:07:14.615 -05 000000024 INF: ===================Frame #415=================== 15-12-21 22:07:14.767 -05 000000024 INF: ===================Frame #427=================== 15-12-21 22:07:14.781 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:14.841 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:14.921 -05 000000024 INF: ===================Frame #439=================== 15-12-21 22:07:14.930 -05 000000028 INF: ===================Frame #440=================== 15-12-21 22:07:14.969 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:15.034 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 22:07:15.034 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:15.071 -05 000000024 INF: ===================Frame #451=================== 15-12-21 22:07:15.091 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:15.138 -05 000000031 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205=================== 15-12-21 22:07:15.138 -05 000000072 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204, Registering and Extracting C039 L001 T1205=================== 15-12-21 22:07:15.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:15.155 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:15.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:15.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:15.223 -05 000000024 INF: ===================Frame #463=================== 15-12-21 22:07:15.257 -05 000000028 INF: ===================Frame #466=================== 15-12-21 22:07:15.268 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:15.286 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:15.286 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:15.373 -05 000000024 INF: ===================Frame #475=================== 15-12-21 22:07:15.379 -05 000000044 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203, Registering and Extracting C039 L001 T1204=================== 15-12-21 22:07:15.390 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:15.405 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:15.446 -05 000000034 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202, Registering and Extracting C039 L001 T1203=================== 15-12-21 22:07:15.461 -05 000000028 INF: ===================Frame #482=================== 15-12-21 22:07:15.467 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:15.468 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:15.468 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:15.523 -05 000000024 INF: ===================Frame #487=================== 15-12-21 22:07:15.630 -05 000000028 INF: ===================Frame #496=================== 15-12-21 22:07:15.673 -05 000000024 INF: ===================Frame #499=================== 15-12-21 22:07:15.694 -05 000000020 INF: ===================Registering and Extracting C039 L001 T1201, Registering and Extracting C039 L001 T1202=================== 15-12-21 22:07:15.717 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:15.739 -05 000000033 INF: ===================Registering and Extracting C039 L001 T1201=================== 15-12-21 22:07:15.777 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:15.803 -05 000000028 INF: ===================Frame #509=================== 15-12-21 22:07:15.804 -05 000000056 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:07:15.823 -05 000000024 INF: ===================Frame #511=================== 15-12-21 22:07:15.875 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:15.882 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:07:15.953 -05 000000028 INF: ===================Frame #521=================== 15-12-21 22:07:15.973 -05 000000024 INF: ===================Frame #523=================== 15-12-21 22:07:16.006 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:16.018 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:07:16.027 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:16.090 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:16.103 -05 000000028 INF: ===================Frame #533=================== 15-12-21 22:07:16.125 -05 000000024 INF: ===================Frame #535=================== 15-12-21 22:07:16.138 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:16.143 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:07:16.240 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:16.246 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:07:16.254 -05 000000028 INF: ===================Frame #545=================== 15-12-21 22:07:16.275 -05 000000024 INF: ===================Frame #547=================== 15-12-21 22:07:16.340 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:16.350 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:16.403 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:16.404 -05 000000028 INF: ===================Frame #557=================== 15-12-21 22:07:16.426 -05 000000024 INF: ===================Frame #558=================== 15-12-21 22:07:16.555 -05 000000028 INF: ===================Frame #569=================== 15-12-21 22:07:16.653 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:16.696 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:16.706 -05 000000028 INF: ===================Frame #581=================== 15-12-21 22:07:16.714 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:16.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:16.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:16.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:16.840 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:16.840 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:16.857 -05 000000028 INF: ===================Frame #593=================== 15-12-21 22:07:16.942 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:16.964 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:16.965 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:16.965 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:16.976 -05 000000024 INF: ===================Frame #602=================== 15-12-21 22:07:17.008 -05 000000028 INF: ===================Frame #604=================== 15-12-21 22:07:17.027 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:17.241 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:17.261 -05 000000024 INF: ===================Frame #624=================== 15-12-21 22:07:17.279 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.743C:A1\r\n 15-12-21 22:07:17.279 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:17.279 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:17.338 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:17.415 -05 000000028 INF: ===================Frame #637=================== 15-12-21 22:07:17.439 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:07:17.458 -05 000000024 INF: ===================Frame #640=================== 15-12-21 22:07:17.565 -05 000000028 INF: ===================Frame #649=================== 15-12-21 22:07:17.591 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:17.648 -05 000000024 INF: ===================Frame #655=================== 15-12-21 22:07:17.650 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:17.716 -05 000000028 INF: ===================Frame #660=================== 15-12-21 22:07:17.799 -05 000000024 INF: ===================Frame #667=================== 15-12-21 22:07:17.900 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:17.945 -05 000000028 INF: ===================Frame #679=================== 15-12-21 22:07:17.949 -05 000000024 INF: ===================Frame #679=================== 15-12-21 22:07:17.961 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:18.096 -05 000000028 INF: ===================Frame #690=================== 15-12-21 22:07:18.099 -05 000000024 INF: ===================Frame #691=================== 15-12-21 22:07:18.192 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:18.211 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:18.211 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.313C:A1\r\n 15-12-21 22:07:18.211 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:18.249 -05 000000024 INF: ===================Frame #703=================== 15-12-21 22:07:18.274 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:18.290 -05 000000028 INF: ===================Frame #706=================== 15-12-21 22:07:18.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:18.337 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:18.337 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:18.400 -05 000000024 INF: ===================Frame #715=================== 15-12-21 22:07:18.439 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:18.464 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:18.464 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:18.464 -05 000000028 INF: ===================Frame #720=================== 15-12-21 22:07:18.524 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:18.551 -05 000000024 INF: ===================Frame #726=================== 15-12-21 22:07:18.572 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:18.586 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:18.633 -05 000000028 INF: ===================Frame #733=================== 15-12-21 22:07:18.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:18.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:18.784 -05 000000028 INF: ===================Frame #745=================== 15-12-21 22:07:18.836 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:18.841 -05 000000024 INF: ===================Frame #749=================== 15-12-21 22:07:18.898 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:18.934 -05 000000028 INF: ===================Frame #757=================== 15-12-21 22:07:18.991 -05 000000024 INF: ===================Frame #761=================== 15-12-21 22:07:19.086 -05 000000028 INF: ===================Frame #769=================== 15-12-21 22:07:19.142 -05 000000024 INF: ===================Frame #773=================== 15-12-21 22:07:19.148 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:19.210 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:19.236 -05 000000028 INF: ===================Frame #781=================== 15-12-21 22:07:19.292 -05 000000024 INF: ===================Frame #785=================== 15-12-21 22:07:19.386 -05 000000028 INF: ===================Frame #792=================== 15-12-21 22:07:19.442 -05 000000024 INF: ===================Frame #797=================== 15-12-21 22:07:19.460 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:19.523 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:19.592 -05 000000024 INF: ===================Frame #809=================== 15-12-21 22:07:19.627 -05 000000028 INF: ===================Frame #812=================== 15-12-21 22:07:19.743 -05 000000024 INF: ===================Frame #821=================== 15-12-21 22:07:19.773 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:19.802 -05 000000028 INF: ===================Frame #825=================== 15-12-21 22:07:19.880 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:19.893 -05 000000024 INF: ===================Frame #833=================== 15-12-21 22:07:19.895 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:19.895 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 22:07:19.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:19.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:19.954 -05 000000028 INF: ===================Frame #837=================== 15-12-21 22:07:19.995 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:07:20.002 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:20.024 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:20.024 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:20.044 -05 000000024 INF: ===================Frame #845=================== 15-12-21 22:07:20.082 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 22:07:20.082 -05 000000062 INF: Current Position of Pump is: 45120 15-12-21 22:07:20.082 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:07:20.104 -05 000000028 INF: ===================Frame #849=================== 15-12-21 22:07:20.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:20.148 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:20.148 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:20.182 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:07:20.196 -05 000000024 INF: ===================Frame #856=================== 15-12-21 22:07:20.255 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:20.255 -05 000000028 INF: ===================Frame #861=================== 15-12-21 22:07:20.271 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:20.276 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:07:20.276 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:20.371 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:20.406 -05 000000028 INF: ===================Frame #873=================== 15-12-21 22:07:20.457 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:20.556 -05 000000028 INF: ===================Frame #885=================== 15-12-21 22:07:20.563 -05 000000024 INF: ===================Frame #886=================== 15-12-21 22:07:20.706 -05 000000028 INF: ===================Frame #897=================== 15-12-21 22:07:20.707 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:20.755 -05 000000024 INF: ===================Frame #901=================== 15-12-21 22:07:20.771 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:20.771 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:20.771 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:07:20.771 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:20.834 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:07:20.834 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:20.857 -05 000000028 INF: ===================Frame #909=================== 15-12-21 22:07:20.906 -05 000000024 INF: ===================Frame #913=================== 15-12-21 22:07:20.935 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:07:20.958 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:07:20.958 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:21.008 -05 000000028 INF: ===================Frame #921=================== 15-12-21 22:07:21.056 -05 000000024 INF: ===================Frame #925=================== 15-12-21 22:07:21.063 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:21.084 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:07:21.084 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:21.159 -05 000000028 INF: ===================Frame #933=================== 15-12-21 22:07:21.187 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:21.188 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:21.189 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:07:21.189 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle=================== 15-12-21 22:07:21.192 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:21.193 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:21.195 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:21.218 -05 000000024 INF: ===================Frame #937=================== 15-12-21 22:07:21.310 -05 000000028 INF: ===================Frame #945=================== 15-12-21 22:07:21.434 -05 000000024 INF: ===================Frame #950=================== 15-12-21 22:07:21.455 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:21.460 -05 000000028 INF: ===================Frame #956=================== 15-12-21 22:07:21.491 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:21.495 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 700ms 15-12-21 22:07:21.897 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:21.942 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:21.944 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Selecting Reagent IMT (1)=================== 15-12-21 22:07:21.949 -05 000000062 INF: Valve B2: Go to position 1 15-12-21 22:07:21.949 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:07:21.969 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:22.003 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 6\r 15-12-21 22:07:22.003 -05 000000062 INF: Valve B2: 9.911 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:07:22.003 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 6 to 1 15-12-21 22:07:22.003 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC1\r 15-12-21 22:07:22.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:22.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:22.004 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:07:22.004 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:07:22.157 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:22.207 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:22.207 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:22.295 -05 000000024 INF: ===================Frame #1022=================== 15-12-21 22:07:22.383 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:22.392 -05 000000028 INF: ===================Frame #1030=================== 15-12-21 22:07:22.455 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.709C:A1\r\n 15-12-21 22:07:22.455 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:22.538 -05 000000024 INF: ===================Frame #1041=================== 15-12-21 22:07:22.630 -05 000000028 INF: ===================Frame #1049=================== 15-12-21 22:07:22.689 -05 000000024 INF: ===================Frame #1054=================== 15-12-21 22:07:22.780 -05 000000028 INF: ===================Frame #1061=================== 15-12-21 22:07:22.877 -05 000000024 INF: ===================Frame #1068=================== 15-12-21 22:07:22.931 -05 000000028 INF: ===================Frame #1073=================== 15-12-21 22:07:23.044 -05 000000024 INF: ===================Frame #1082=================== 15-12-21 22:07:23.080 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 1\r 15-12-21 22:07:23.080 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:23.080 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:07:23.080 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:23.081 -05 000000028 INF: ===================Frame #1085=================== 15-12-21 22:07:23.144 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:07:23.144 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:23.213 -05 000000024 INF: ===================Frame #1095=================== 15-12-21 22:07:23.231 -05 000000028 INF: ===================Frame #1096=================== 15-12-21 22:07:23.244 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:07:23.267 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:07:23.267 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:23.363 -05 000000024 INF: ===================Frame #1107=================== 15-12-21 22:07:23.469 -05 000000028 INF: ===================Frame #1115=================== 15-12-21 22:07:23.493 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:23.513 -05 000000024 INF: ===================Frame #1119=================== 15-12-21 22:07:23.516 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.938C:A1\r\n 15-12-21 22:07:23.516 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:23.620 -05 000000028 INF: ===================Frame #1127=================== 15-12-21 22:07:23.623 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:23.642 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:07:23.642 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:23.663 -05 000000024 INF: ===================Frame #1131=================== 15-12-21 22:07:23.750 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:23.751 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:23.751 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:07:23.752 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:23.766 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:23.766 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:23.771 -05 000000028 INF: ===================Frame #1139=================== 15-12-21 22:07:23.811 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:23.813 -05 000000024 INF: ===================Frame #1142=================== 15-12-21 22:07:23.818 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 1, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:07:23.871 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:23.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:23.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:23.911 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:07:23.921 -05 000000028 INF: ===================Frame #1151=================== 15-12-21 22:07:24.002 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:24.007 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 22:07:24.007 -05 000000062 INF: Current Position of Pump is: 45120 15-12-21 22:07:24.007 -05 000000062 INF: Dispensing because using MultiAspirate and syringe is full 15-12-21 22:07:24.015 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:24.015 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:24.040 -05 000000024 INF: ===================Frame #1160=================== 15-12-21 22:07:24.071 -05 000000028 INF: ===================Frame #1163=================== 15-12-21 22:07:24.107 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r 15-12-21 22:07:24.186 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:24.211 -05 000000024 INF: ===================Frame #1174=================== 15-12-21 22:07:24.221 -05 000000028 INF: ===================Frame #1175=================== 15-12-21 22:07:24.286 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:24.371 -05 000000028 INF: ===================Frame #1187=================== 15-12-21 22:07:24.373 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:24.400 -05 000000024 INF: ===================Frame #1189=================== 15-12-21 22:07:24.521 -05 000000028 INF: ===================Frame #1198=================== 15-12-21 22:07:24.550 -05 000000024 INF: ===================Frame #1201=================== 15-12-21 22:07:24.623 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:24.685 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:24.700 -05 000000024 INF: ===================Frame #1213=================== 15-12-21 22:07:24.785 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r 15-12-21 22:07:24.796 -05 000000028 INF: ===================Frame #1220=================== 15-12-21 22:07:24.851 -05 000000024 INF: ===================Frame #1224=================== 15-12-21 22:07:24.873 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:24.971 -05 000000028 INF: ===================Frame #1234=================== 15-12-21 22:07:24.973 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:25.059 -05 000000024 INF: ===================Frame #1241=================== 15-12-21 22:07:25.061 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:25.138 -05 000000028 INF: ===================Frame #1247=================== 15-12-21 22:07:25.200 -05 000000086 INF: FPGA: Recv TDIYWAIT 15-12-21 22:07:25.201 -05 000000092 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:25.203 -05 000000092 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:07:25.208 -05 000000041 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:07:25.208 -05 000000041 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:07:25.208 -05 000000041 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:07:25.208 -05 000000041 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:07:25.208 -05 000000041 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:07:25.208 -05 000000022 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:07:25.209 -05 000000022 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:07:25.209 -05 000000022 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:07:25.209 -05 000000022 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:07:25.215 -05 000000022 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:07:25.216 -05 000000024 INF: ===================Frame #1250=================== 15-12-21 22:07:25.245 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:25.253 -05 000000024 INF: Camera complete - got 1250 frames. 15-12-21 22:07:25.254 -05 000000024 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:07:25.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:25.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:25.311 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:25.375 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:25.378 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:25.388 -05 000000033 INF: FPGA: Recv EX1MV 15-12-21 22:07:25.388 -05 000000041 INF: Excitation Filter 1: Moved 36 steps in 180.013 ms 15-12-21 22:07:25.388 -05 000000041 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 180.1063 ms 15-12-21 22:07:25.388 -05 000000041 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 180.1885 ms 15-12-21 22:07:25.389 -05 000000041 INF: ====================================== 15-12-21 22:07:25.390 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:25.390 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:25.505 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:25.570 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:07:25.570 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:25.630 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:25.642 -05 000000033 INF: FPGA: Recv EX2MV 15-12-21 22:07:25.642 -05 000000022 INF: Excitation Filter 2: Moved 107 steps in 433.2015 ms 15-12-21 22:07:25.642 -05 000000022 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 433.3024 ms 15-12-21 22:07:25.642 -05 000000022 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 433.3959 ms 15-12-21 22:07:25.647 -05 000000022 INF: ====================================== 15-12-21 22:07:25.650 -05 000000092 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:25.652 -05 000000092 INF: ====================================== 15-12-21 22:07:25.681 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:25.682 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:25.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:25.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:25.707 -05 000000029 INF: Y Motor: Moved to 9.0764 after 16697 ms 15-12-21 22:07:25.708 -05 000000029 INF: ====================================== 15-12-21 22:07:25.755 -05 000000028 INF: ===================Frame #1250=================== 15-12-21 22:07:25.755 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:07:25.781 -05 000000024 INF: ====================================== 15-12-21 22:07:25.790 -05 000000028 INF: Camera complete - got 1250 frames. 15-12-21 22:07:25.792 -05 000000028 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:07:25.914 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:07:25.932 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:25.937 -05 000000028 INF: ====================================== 15-12-21 22:07:25.939 -05 000000025 INF: ===================Camera TDI=================== 15-12-21 22:07:25.940 -05 000000025 INF: ====================================== 15-12-21 22:07:25.944 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:25.948 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:25.951 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:25.951 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:07:25.997 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:26.011 -05 000000022 INF: FPGA: Recv TDICLINES 9074 15-12-21 22:07:26.011 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:07:26.073 -05 000000082 INF: FPGA: Recv TDIYERD 907646 15-12-21 22:07:26.073 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:07:26.137 -05 000000022 INF: FPGA: Recv ZADCR 37577 15-12-21 22:07:26.137 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.143. Y moved -60.304 mm 15-12-21 22:07:26.137 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:07:26.197 -05 000000081 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:07:26.197 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:07:26.197 -05 000000057 INF: TDIScan finished after 22135.1048 ms 15-12-21 22:07:26.197 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:07:26.198 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:07:26.200 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.227 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.016 um 15-12-21 22:07:26.228 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.232 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.236 -05 000000043 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:07:26.236 -05 000000061 INF: ===================Dither Clean Up Command=================== 15-12-21 22:07:26.236 -05 000000036 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:07:26.240 -05 000000047 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:07:26.240 -05 000000036 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:07:26.240 -05 000000036 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:07:26.240 -05 000000043 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:07:26.246 -05 000000045 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:07:26.246 -05 000000087 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:26.246 -05 000000045 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:07:26.247 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:26.247 -05 000000087 INF: ===================LFT:Extracting coords=================== 15-12-21 22:07:26.262 -05 000000084 INF: FPGA: Recv ZSTEP 15-12-21 22:07:26.262 -05 000000084 INF: FPGA: Recv ZSEL 15-12-21 22:07:26.262 -05 000000045 INF: FPGA: Xmit ZDACW 42654\n 15-12-21 22:07:26.263 -05 000000043 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:07:26.263 -05 000000036 INF: ====================================== 15-12-21 22:07:26.264 -05 000000043 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:07:26.264 -05 000000047 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:07:26.264 -05 000000043 INF: ====================================== 15-12-21 22:07:26.281 -05 000000087 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:26.284 -05 000000087 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:07:26.288 -05 000000058 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:26.288 -05 000000025 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:26.288 -05 000000081 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:26.288 -05 000000058 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:26.291 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:26.291 -05 000000081 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:26.291 -05 000000025 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:26.291 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:26.312 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:26.324 -05 000000056 INF: FPGA: Recv ZDACW 15-12-21 22:07:26.325 -05 000000047 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:07:26.326 -05 000000047 INF: ====================================== 15-12-21 22:07:26.327 -05 000000045 INF: ====================================== 15-12-21 22:07:26.517 -05 000000058 INF: LFT found best fwhm score 2.832131 in 176 ms 15-12-21 22:07:26.517 -05 000000058 INF: LFT found good score at index 8901 with fwhm value 2.832131. Next cycle, cycle 40 starting Z position for top surface is at -0.164 mm FC:A, C:39,L:2,T 15-12-21 22:07:26.517 -05 000000081 INF: LFT found best fwhm score 2.927674 in 175 ms 15-12-21 22:07:26.517 -05 000000081 INF: LFT found good score at index 7381 with fwhm value 2.927674. Next cycle, cycle 40 starting Z position for top surface is at -0.164 mm FC:A, C:39,L:2,T 15-12-21 22:07:26.517 -05 000000037 INF: LFT found best fwhm score 3.059782 in 175 ms 15-12-21 22:07:26.517 -05 000000037 INF: LFT found good score at index 7721 with fwhm value 3.059782. Next cycle, cycle 40 starting Z position for top surface is at -0.164 mm FC:A, C:39,L:2,T 15-12-21 22:07:26.518 -05 000000025 INF: LFT found best fwhm score 2.886257 in 178 ms 15-12-21 22:07:26.518 -05 000000025 INF: LFT found good score at index 8237 with fwhm value 2.886257. Next cycle, cycle 40 starting Z position for top surface is at -0.164 mm FC:A, C:39,L:2,T 15-12-21 22:07:26.518 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:26.518 -05 000000058 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:26.518 -05 000000025 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:26.518 -05 000000037 INF: ====================================== 15-12-21 22:07:26.518 -05 000000081 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:26.518 -05 000000058 INF: ====================================== 15-12-21 22:07:26.518 -05 000000081 INF: ====================================== 15-12-21 22:07:26.519 -05 000000025 INF: ====================================== 15-12-21 22:07:26.524 -05 000000087 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:26.528 -05 000000087 INF: LFT weighted average best Z for top surface is at -0.164mm FC:A, C:39,L:2,T 15-12-21 22:07:26.529 -05 000000087 INF: ====================================== 15-12-21 22:07:26.530 -05 000000061 INF: ====================================== 15-12-21 22:07:26.534 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.535 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:07:26.535 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.535 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:07:26.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:07:26.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:07:26.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:07:26.537 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:07:26.537 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:07:26.538 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:07:26.539 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Waiting for image analysis=================== 15-12-21 22:07:26.539 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:07:26.539 -05 000000057 INF: Waited 2 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 2, buffer wait time 0 15-12-21 22:07:26.540 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:26.540 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:07:26.540 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:26.540 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:07:26.541 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:07:26.545 -05 000000072 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105=================== 15-12-21 22:07:26.545 -05 000000031 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105=================== 15-12-21 22:07:26.545 -05 000000027 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105, Registering and Extracting C039 L002 T1106=================== 15-12-21 22:07:26.545 -05 000000044 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105=================== 15-12-21 22:07:26.545 -05 000000020 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105=================== 15-12-21 22:07:26.546 -05 000000051 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105, Registering and Extracting C039 L002 T1106, Registering and Extracting C039 L002 T1107=================== 15-12-21 22:07:26.546 -05 000000088 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105, Registering and Extracting C039 L002 T1106=================== 15-12-21 22:07:26.550 -05 000000040 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105, Registering and Extracting C039 L002 T1106, Registering and Extracting C039 L002 T1107, Registering and Extracting C039 L002 T1108=================== 15-12-21 22:07:26.564 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:26.564 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:07:26.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:26.566 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -162.7 um, section = B_1 15-12-21 22:07:26.572 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:26.573 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:26.580 -05 000000028 INF: ===================Move X,Y=================== 15-12-21 22:07:26.580 -05 000000068 INF: ===================MoveEmissionFilters=================== 15-12-21 22:07:26.580 -05 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:26.581 -05 000000028 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:07:26.585 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:07:26.585 -05 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:07:26.585 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:07:26.585 -05 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:07:26.585 -05 000000058 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:07:26.585 -05 000000041 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:07:26.585 -05 000000024 INF: ===================Move X Motor without settling=================== 15-12-21 22:07:26.585 -05 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:26.586 -05 000000082 INF: ===================Move Y Motor without settling=================== 15-12-21 22:07:26.586 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:07:26.586 -05 000000082 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:07:26.586 -05 000000082 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:07:26.590 -05 000000082 INF: Y Motor: Xmit 1G\n 15-12-21 22:07:26.590 -05 000000024 INF: X Motor: Xmit PR VM\n 15-12-21 22:07:26.590 -05 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:07:26.594 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:07:26.594 -05 000000041 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:07:26.599 -05 000000047 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:07:26.600 -05 000000036 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:07:26.600 -05 000000036 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:07:26.604 -05 000000036 INF: ====================================== 15-12-21 22:07:26.604 -05 000000079 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:07:26.604 -05 000000047 INF: ====================================== 15-12-21 22:07:26.604 -05 000000029 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:07:26.604 -05 000000037 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:07:26.604 -05 000000033 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:07:26.605 -05 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:07:26.609 -05 000000079 INF: ====================================== 15-12-21 22:07:26.609 -05 000000009 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:07:26.610 -05 000000037 INF: ====================================== 15-12-21 22:07:26.610 -05 000000084 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:07:26.610 -05 000000084 INF: ====================================== 15-12-21 22:07:26.610 -05 000000009 INF: ====================================== 15-12-21 22:07:26.611 -05 000000033 INF: ====================================== 15-12-21 22:07:26.616 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:07:26.616 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:07:26.616 -05 000000041 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:07:26.620 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:26.623 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:26.623 -05 000000029 INF: ====================================== 15-12-21 22:07:26.623 -05 000000048 INF: ===================Camera Arm TDI=================== 15-12-21 22:07:26.623 -05 000000081 INF: ====================================== 15-12-21 22:07:26.623 -05 000000049 INF: ====================================== 15-12-21 22:07:26.624 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:26.624 -05 000000041 INF: ====================================== 15-12-21 22:07:26.628 -05 000000025 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:07:26.628 -05 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:07:26.631 -05 000000092 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:07:26.634 -05 000000092 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:07:26.635 -05 000000025 INF: ====================================== 15-12-21 22:07:26.645 -05 000000068 INF: ====================================== 15-12-21 22:07:26.652 -05 000000082 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:07:26.654 -05 000000082 INF: Y Motor: Recv 1G\r\n 15-12-21 22:07:26.655 -05 000000082 INF: Y Motor: Xmit 1D\n 15-12-21 22:07:26.686 -05 000000024 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:07:26.686 -05 000000024 INF: X Motor: Xmit PR VI\n 15-12-21 22:07:26.713 -05 000000025 INF: FPGA: Recv ZSEL 15-12-21 22:07:26.714 -05 000000082 INF: Y Motor: Recv 1D\r\n 15-12-21 22:07:26.714 -05 000000092 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:07:26.714 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:26.715 -05 000000082 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:07:26.716 -05 000000082 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:07:26.719 -05 000000092 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:07:26.719 -05 000000092 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:07:26.719 -05 000000092 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:07:26.746 -05 000000024 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:07:26.746 -05 000000024 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:07:26.746 -05 000000024 INF: X Motor: Moving to 17.9390 mm @15.000 mm/sec, started at 17.1665 mm 15-12-21 22:07:26.746 -05 000000024 INF: X Motor: Xmit MA -16819\n 15-12-21 22:07:26.774 -05 000000074 INF: FPGA: Recv ZSTEP 15-12-21 22:07:26.775 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:26.802 -05 000000092 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:07:26.806 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:26.810 -05 000000092 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:07:26.828 -05 000000024 INF: X Motor: Recv MA -16819\r\n> 15-12-21 22:07:26.829 -05 000000092 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:07:26.829 -05 000000092 INF: Z Motor: Arming to move to -0.1227 mm 15-12-21 22:07:26.829 -05 000000092 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:07:26.831 -05 000000024 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:07:26.875 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:26.911 -05 000000064 INF: FPGA: Recv ZYT 15-12-21 22:07:26.911 -05 000000092 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907643 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:07:26.911 -05 000000092 INF: FPGA: Xmit ZARM 32169\n 15-12-21 22:07:26.966 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:26.966 -05 000000023 INF: FPGA: Recv ZARM 15-12-21 22:07:26.966 -05 000000092 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 54.4511 ms 15-12-21 22:07:26.966 -05 000000092 INF: Z Motor: ArmAbsStepped took 137.1338 ms 15-12-21 22:07:26.967 -05 000000092 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:26.969 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:26.998 -05 000000092 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:07:27.009 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:27.017 -05 000000092 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:07:27.017 -05 000000092 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:27.020 -05 000000092 INF: ====================================== 15-12-21 22:07:27.135 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:27.198 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:27.198 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:27.248 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:27.322 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:27.323 -05 000000024 INF: X Motor: Xmit PR ER\n 15-12-21 22:07:27.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:27.387 -05 000000024 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:07:27.387 -05 000000024 INF: X Motor: Moved to 17.9380 after 556 ms 15-12-21 22:07:27.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:27.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:27.387 -05 000000024 INF: ====================================== 15-12-21 22:07:27.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:27.619 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:27.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:27.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:27.737 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:27.853 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:27.931 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.246C:A1\r\n 15-12-21 22:07:27.931 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:27.987 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:28.044 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:28.264 -05 000000048 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:07:28.264 -05 000000048 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:07:28.264 -05 000000048 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:07:28.294 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:28.351 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:28.601 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:28.664 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:28.679 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:28.752 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.764C:A1\r\n 15-12-21 22:07:28.752 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:28.929 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:29.007 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:29.060 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:29.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:29.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:29.169 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:29.197 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:29.197 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:29.259 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:29.300 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:29.320 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:29.321 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:29.321 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:29.570 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:29.632 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:29.632 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 22:07:29.733 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P21120R\r 15-12-21 22:07:29.778 -05 000000048 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:07:29.779 -05 000000048 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:07:29.779 -05 000000048 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:07:29.780 -05 000000048 INF: ====================================== 15-12-21 22:07:29.782 -05 000000058 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:29.789 -05 000000058 INF: ====================================== 15-12-21 22:07:29.818 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:29.918 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:30.005 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:30.255 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:30.316 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:30.551 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:30.566 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:30.570 -05 000000082 INF: Y Motor: Moved to 70.6885 after 3853 ms 15-12-21 22:07:30.571 -05 000000082 INF: ====================================== 15-12-21 22:07:30.572 -05 000000028 INF: ===================Move X,Y=================== 15-12-21 22:07:30.592 -05 000000028 INF: ====================================== 15-12-21 22:07:30.613 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:30.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:30.660 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:30.660 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:30.660 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:07:30.660 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:30.698 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:07:30.699 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:07:30.784 -05 000000078 INF: FPGA: Recv ZFREQCL 15-12-21 22:07:30.784 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:30.849 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:07:30.849 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:30.849 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:07:30.852 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.986C:A1\r\n 15-12-21 22:07:30.852 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:30.889 -05 000000041 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:07:30.889 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:07:30.894 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:30.900 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:30.914 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:30.923 -05 000000063 INF: ===================TDI FPGA Arm=================== 15-12-21 22:07:30.924 -05 000000081 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:07:30.925 -05 000000081 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:07:30.928 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:30.945 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:07:30.945 -05 000000063 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:07:30.984 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:30.986 -05 000000081 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:07:30.986 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:30.987 -05 000000081 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:07:30.987 -05 000000081 INF: ====================================== 15-12-21 22:07:31.002 -05 000000061 INF: FPGA: Recv TDIYPOS 15-12-21 22:07:31.002 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:31.004 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:07:31.004 -05 000000063 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:07:31.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:31.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:31.182 -05 000000023 INF: FPGA: Recv TDIYARM3 15-12-21 22:07:31.184 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:31.188 -05 000000063 INF: ===================TDI FPGA Arm=================== 15-12-21 22:07:31.189 -05 000000063 INF: ====================================== 15-12-21 22:07:31.191 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:31.199 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:31.199 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:31.200 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:31.201 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:31.202 -05 000000049 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:07:31.202 -05 000000034 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:07:31.203 -05 000000049 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:07:31.203 -05 000000049 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:07:31.203 -05 000000049 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:07:31.203 -05 000000049 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:07:31.203 -05 000000034 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:07:31.203 -05 000000034 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:07:31.203 -05 000000034 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:07:31.205 -05 000000034 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:07:31.237 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:31.274 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:31.296 -05 000000088 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105, Registering and Extracting C039 L002 T1106, Registering and Extracting C039 L002 T1107=================== 15-12-21 22:07:31.302 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:31.302 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:31.302 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:31.330 -05 000000031 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1105, Registering and Extracting C039 L002 T1106=================== 15-12-21 22:07:31.361 -05 000000092 INF: FPGA: Recv EX1MV 15-12-21 22:07:31.362 -05 000000034 INF: Excitation Filter 1: Moved -36 steps in 158.7093 ms 15-12-21 22:07:31.362 -05 000000034 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 158.9341 ms 15-12-21 22:07:31.362 -05 000000034 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 159.0114 ms 15-12-21 22:07:31.363 -05 000000034 INF: ====================================== 15-12-21 22:07:31.383 -05 000000072 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104=================== 15-12-21 22:07:31.383 -05 000000027 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104=================== 15-12-21 22:07:31.384 -05 000000077 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109=================== 15-12-21 22:07:31.384 -05 000000038 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110=================== 15-12-21 22:07:31.385 -05 000000066 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111=================== 15-12-21 22:07:31.427 -05 000000011 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111, Registering and Extracting C039 L002 T1112=================== 15-12-21 22:07:31.505 -05 000000020 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111=================== 15-12-21 22:07:31.580 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:31.582 -05 000000061 INF: FPGA: Recv EX2MV 15-12-21 22:07:31.582 -05 000000049 INF: Excitation Filter 2: Moved -107 steps in 379.2382 ms 15-12-21 22:07:31.582 -05 000000049 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 379.3938 ms 15-12-21 22:07:31.582 -05 000000049 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 379.4901 ms 15-12-21 22:07:31.584 -05 000000049 INF: ====================================== 15-12-21 22:07:31.586 -05 000000060 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111, Registering and Extracting C039 L002 T1113=================== 15-12-21 22:07:31.586 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:31.588 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:31.591 -05 000000047 INF: ===================Camera TDI=================== 15-12-21 22:07:31.591 -05 000000028 INF: ===================Move Y Motor without settling=================== 15-12-21 22:07:31.591 -05 000000064 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:31.591 -05 000000025 INF: ===================FPGA Z Wait=================== 15-12-21 22:07:31.592 -05 000000025 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:07:31.592 -05 000000028 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:07:31.592 -05 000000028 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:07:31.592 -05 000000064 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:07:31.593 -05 000000047 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:07:31.594 -05 000000064 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:07:31.595 -05 000000028 INF: Y Motor: Xmit 1G\n 15-12-21 22:07:31.595 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 22:07:31.595 -05 000000055 INF: ===================Camera TDI=================== 15-12-21 22:07:31.653 -05 000000028 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:07:31.653 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:31.654 -05 000000028 INF: Y Motor: Recv 1G\r\n 15-12-21 22:07:31.655 -05 000000028 INF: Y Motor: Xmit 1D\n 15-12-21 22:07:31.707 -05 000000028 INF: Y Motor: Recv 1D\r\n 15-12-21 22:07:31.708 -05 000000028 INF: Y Motor: Recv *407662\r\n 15-12-21 22:07:31.709 -05 000000028 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:07:31.765 -05 000000044 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111=================== 15-12-21 22:07:31.788 -05 000000089 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111, Registering and Extracting C039 L002 T1114=================== 15-12-21 22:07:31.915 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:31.917 -05 000000029 INF: FPGA: Recv ZWAIT 15-12-21 22:07:31.918 -05 000000025 INF: ====================================== 15-12-21 22:07:31.979 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:32.066 -05 000000084 INF: ===================Frame #2=================== 15-12-21 22:07:32.066 -05 000000055 INF: ===================Frame #2=================== 15-12-21 22:07:32.117 -05 000000051 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111=================== 15-12-21 22:07:32.217 -05 000000075 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111, Registering and Extracting C039 L002 T1115=================== 15-12-21 22:07:32.218 -05 000000040 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111=================== 15-12-21 22:07:32.229 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:32.236 -05 000000055 INF: ===================Frame #15=================== 15-12-21 22:07:32.240 -05 000000084 INF: ===================Frame #15=================== 15-12-21 22:07:32.283 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:32.318 -05 000000076 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111, Registering and Extracting C039 L002 T1116=================== 15-12-21 22:07:32.388 -05 000000055 INF: ===================Frame #27=================== 15-12-21 22:07:32.390 -05 000000084 INF: ===================Frame #27=================== 15-12-21 22:07:32.533 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:32.539 -05 000000055 INF: ===================Frame #39=================== 15-12-21 22:07:32.540 -05 000000084 INF: ===================Frame #39=================== 15-12-21 22:07:32.610 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:32.612 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:32.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:32.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:32.690 -05 000000055 INF: ===================Frame #51=================== 15-12-21 22:07:32.690 -05 000000084 INF: ===================Frame #51=================== 15-12-21 22:07:32.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:32.848 -05 000000055 INF: ===================Frame #63=================== 15-12-21 22:07:32.848 -05 000000084 INF: ===================Frame #63=================== 15-12-21 22:07:32.862 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:32.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:32.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:32.942 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:32.990 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:32.999 -05 000000055 INF: ===================Frame #75=================== 15-12-21 22:07:32.999 -05 000000084 INF: ===================Frame #75=================== 15-12-21 22:07:33.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:33.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:33.150 -05 000000055 INF: ===================Frame #87=================== 15-12-21 22:07:33.150 -05 000000084 INF: ===================Frame #87=================== 15-12-21 22:07:33.209 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:33.209 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:33.312 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:33.312 -05 000000055 INF: ===================Frame #100=================== 15-12-21 22:07:33.312 -05 000000084 INF: ===================Frame #100=================== 15-12-21 22:07:33.314 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.386C:A1\r\n 15-12-21 22:07:33.314 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:33.562 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:33.635 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:33.885 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:33.915 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:33.979 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:33.980 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.772C:A1\r\n 15-12-21 22:07:33.980 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:34.229 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:34.251 -05 000000055 INF: ===================Frame #174=================== 15-12-21 22:07:34.255 -05 000000084 INF: ===================Frame #175=================== 15-12-21 22:07:34.335 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:34.343 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:34.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:34.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:34.406 -05 000000084 INF: ===================Frame #187=================== 15-12-21 22:07:34.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:34.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:34.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:34.556 -05 000000084 INF: ===================Frame #199=================== 15-12-21 22:07:34.592 -05 000000055 INF: ===================Frame #201=================== 15-12-21 22:07:34.593 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:34.635 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:34.654 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:34.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:34.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:34.707 -05 000000084 INF: ===================Frame #210=================== 15-12-21 22:07:34.743 -05 000000055 INF: ===================Frame #213=================== 15-12-21 22:07:34.894 -05 000000055 INF: ===================Frame #225=================== 15-12-21 22:07:34.904 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:34.967 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:35.045 -05 000000055 INF: ===================Frame #237=================== 15-12-21 22:07:35.133 -05 000000084 INF: ===================Frame #244=================== 15-12-21 22:07:35.196 -05 000000055 INF: ===================Frame #249=================== 15-12-21 22:07:35.217 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:35.280 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:35.347 -05 000000055 INF: ===================Frame #261=================== 15-12-21 22:07:35.370 -05 000000084 INF: ===================Frame #263=================== 15-12-21 22:07:35.499 -05 000000055 INF: ===================Frame #273=================== 15-12-21 22:07:35.520 -05 000000084 INF: ===================Frame #275=================== 15-12-21 22:07:35.530 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:35.590 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:35.607 -05 000000077 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110, Registering and Extracting C039 L002 T1111=================== 15-12-21 22:07:35.650 -05 000000055 INF: ===================Frame #285=================== 15-12-21 22:07:35.671 -05 000000084 INF: ===================Frame #287=================== 15-12-21 22:07:35.801 -05 000000055 INF: ===================Frame #297=================== 15-12-21 22:07:35.821 -05 000000084 INF: ===================Frame #299=================== 15-12-21 22:07:35.840 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:35.892 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:35.905 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:35.907 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:35.907 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:35.916 -05 000000066 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109, Registering and Extracting C039 L002 T1110=================== 15-12-21 22:07:35.952 -05 000000055 INF: ===================Frame #309=================== 15-12-21 22:07:35.971 -05 000000084 INF: ===================Frame #310=================== 15-12-21 22:07:36.014 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:36.028 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:07:36.028 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:36.102 -05 000000055 INF: ===================Frame #321=================== 15-12-21 22:07:36.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:36.154 -05 000000011 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104, Registering and Extracting C039 L002 T1109=================== 15-12-21 22:07:36.155 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:36.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:36.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:36.214 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:36.216 -05 000000084 INF: ===================Frame #330=================== 15-12-21 22:07:36.253 -05 000000055 INF: ===================Frame #333=================== 15-12-21 22:07:36.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:36.270 -05 000000038 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103, Registering and Extracting C039 L002 T1104=================== 15-12-21 22:07:36.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:36.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:36.391 -05 000000084 INF: ===================Frame #344=================== 15-12-21 22:07:36.404 -05 000000055 INF: ===================Frame #345=================== 15-12-21 22:07:36.466 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:36.527 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:36.554 -05 000000055 INF: ===================Frame #356=================== 15-12-21 22:07:36.557 -05 000000084 INF: ===================Frame #357=================== 15-12-21 22:07:36.634 -05 000000060 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102, Registering and Extracting C039 L002 T1103=================== 15-12-21 22:07:36.707 -05 000000084 INF: ===================Frame #369=================== 15-12-21 22:07:36.777 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:36.838 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:36.858 -05 000000084 INF: ===================Frame #381=================== 15-12-21 22:07:36.908 -05 000000055 INF: ===================Frame #384=================== 15-12-21 22:07:37.009 -05 000000084 INF: ===================Frame #392=================== 15-12-21 22:07:37.068 -05 000000089 INF: ===================Registering and Extracting C039 L002 T1101, Registering and Extracting C039 L002 T1102=================== 15-12-21 22:07:37.088 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:37.092 -05 000000055 INF: ===================Frame #399=================== 15-12-21 22:07:37.112 -05 000000075 INF: ===================Registering and Extracting C039 L002 T1101=================== 15-12-21 22:07:37.151 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:37.151 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:07:37.205 -05 000000084 INF: ===================Frame #408=================== 15-12-21 22:07:37.243 -05 000000055 INF: ===================Frame #411=================== 15-12-21 22:07:37.252 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:07:37.333 -05 000000076 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:07:37.338 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:37.340 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 22:07:37.340 -05 000000062 INF: Current Position of Pump is: 21120 15-12-21 22:07:37.340 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:07:37.346 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:07:37.374 -05 000000084 INF: ===================Frame #421=================== 15-12-21 22:07:37.393 -05 000000055 INF: ===================Frame #423=================== 15-12-21 22:07:37.441 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:07:37.455 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:37.463 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:07:37.503 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:37.524 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:37.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:37.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:37.525 -05 000000084 INF: ===================Frame #433=================== 15-12-21 22:07:37.543 -05 000000055 INF: ===================Frame #435=================== 15-12-21 22:07:37.565 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:37.570 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:07:37.624 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:37.626 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:37.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:37.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:37.675 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:37.676 -05 000000084 INF: ===================Frame #445=================== 15-12-21 22:07:37.682 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:07:37.693 -05 000000055 INF: ===================Frame #447=================== 15-12-21 22:07:37.712 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:07:37.756 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:37.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:37.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:37.786 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:37.829 -05 000000084 INF: ===================Frame #457=================== 15-12-21 22:07:37.843 -05 000000055 INF: ===================Frame #458=================== 15-12-21 22:07:37.964 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:07:37.979 -05 000000084 INF: ===================Frame #469=================== 15-12-21 22:07:38.027 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:07:38.027 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:38.028 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:07:38.028 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:38.089 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:07:38.089 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:38.131 -05 000000084 INF: ===================Frame #481=================== 15-12-21 22:07:38.159 -05 000000055 INF: ===================Frame #483=================== 15-12-21 22:07:38.197 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:07:38.275 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:07:38.275 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:38.281 -05 000000084 INF: ===================Frame #493=================== 15-12-21 22:07:38.310 -05 000000055 INF: ===================Frame #495=================== 15-12-21 22:07:38.386 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:07:38.400 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:07:38.400 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:38.432 -05 000000084 INF: ===================Frame #505=================== 15-12-21 22:07:38.460 -05 000000055 INF: ===================Frame #507=================== 15-12-21 22:07:38.505 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:38.506 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:38.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:38.512 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:38.512 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:07:38.514 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:07:38.514 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°, FC temperature to 65°=================== 15-12-21 22:07:38.528 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.868C:A1\r\n 15-12-21 22:07:38.528 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:38.586 -05 000000084 INF: ===================Frame #517=================== 15-12-21 22:07:38.610 -05 000000055 INF: ===================Frame #519=================== 15-12-21 22:07:38.654 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:65.00\r 15-12-21 22:07:38.767 -05 000000055 INF: ===================Frame #531=================== 15-12-21 22:07:38.767 -05 000000084 INF: ===================Frame #531=================== 15-12-21 22:07:38.768 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:07:38.768 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:38.968 -05 000000055 INF: ===================Frame #543=================== 15-12-21 22:07:39.000 -05 000000084 INF: ===================Frame #543=================== 15-12-21 22:07:39.184 -05 000000084 INF: ===================Frame #564=================== 15-12-21 22:07:39.204 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:07:39.211 -05 000000055 INF: ===================Frame #567=================== 15-12-21 22:07:39.329 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:39.351 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.891C:A1\r\n 15-12-21 22:07:39.351 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:39.362 -05 000000055 INF: ===================Frame #578=================== 15-12-21 22:07:39.454 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 22:07:39.476 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:07:39.476 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:39.560 -05 000000084 INF: ===================Frame #594=================== 15-12-21 22:07:39.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:39.579 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:07:39.579 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:07:39.581 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:07:39.582 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:07:39.582 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:39.583 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:39.584 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:39.587 -05 000000062 INF: WaitCommand(25000) start 15-12-21 22:07:39.587 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 25 of 25 seconds left=================== 15-12-21 22:07:39.606 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:39.606 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:39.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:39.755 -05 000000055 INF: ===================Frame #610=================== 15-12-21 22:07:39.791 -05 000000084 INF: ===================Frame #612=================== 15-12-21 22:07:39.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:39.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:39.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:39.929 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:39.929 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:39.989 -05 000000084 INF: ===================Frame #628=================== 15-12-21 22:07:40.006 -05 000000055 INF: ===================Frame #629=================== 15-12-21 22:07:40.157 -05 000000055 INF: ===================Frame #641=================== 15-12-21 22:07:40.163 -05 000000084 INF: ===================Frame #642=================== 15-12-21 22:07:40.307 -05 000000055 INF: ===================Frame #653=================== 15-12-21 22:07:40.334 -05 000000084 INF: ===================Frame #655=================== 15-12-21 22:07:40.457 -05 000000055 INF: ===================Frame #665=================== 15-12-21 22:07:40.484 -05 000000084 INF: ===================Frame #667=================== 15-12-21 22:07:40.588 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:40.588 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 24 of 25 seconds left=================== 15-12-21 22:07:40.608 -05 000000055 INF: ===================Frame #677=================== 15-12-21 22:07:40.634 -05 000000084 INF: ===================Frame #679=================== 15-12-21 22:07:40.758 -05 000000055 INF: ===================Frame #689=================== 15-12-21 22:07:40.784 -05 000000084 INF: ===================Frame #691=================== 15-12-21 22:07:40.908 -05 000000055 INF: ===================Frame #701=================== 15-12-21 22:07:40.934 -05 000000084 INF: ===================Frame #703=================== 15-12-21 22:07:41.059 -05 000000055 INF: ===================Frame #713=================== 15-12-21 22:07:41.084 -05 000000084 INF: ===================Frame #715=================== 15-12-21 22:07:41.154 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:41.177 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:07:41.177 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:41.209 -05 000000055 INF: ===================Frame #724=================== 15-12-21 22:07:41.234 -05 000000084 INF: ===================Frame #726=================== 15-12-21 22:07:41.277 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:41.301 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:41.301 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:41.402 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:41.427 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:41.427 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:41.526 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:41.553 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:41.553 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:41.567 -05 000000084 INF: ===================Frame #753=================== 15-12-21 22:07:41.586 -05 000000055 INF: ===================Frame #754=================== 15-12-21 22:07:41.589 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:41.589 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 23 of 25 seconds left=================== 15-12-21 22:07:41.717 -05 000000084 INF: ===================Frame #765=================== 15-12-21 22:07:41.769 -05 000000055 INF: ===================Frame #769=================== 15-12-21 22:07:41.868 -05 000000084 INF: ===================Frame #777=================== 15-12-21 22:07:41.919 -05 000000055 INF: ===================Frame #781=================== 15-12-21 22:07:42.018 -05 000000084 INF: ===================Frame #788=================== 15-12-21 22:07:42.069 -05 000000055 INF: ===================Frame #792=================== 15-12-21 22:07:42.266 -05 000000084 INF: ===================Frame #808=================== 15-12-21 22:07:42.290 -05 000000055 INF: ===================Frame #810=================== 15-12-21 22:07:42.452 -05 000000084 INF: ===================Frame #823=================== 15-12-21 22:07:42.468 -05 000000055 INF: ===================Frame #824=================== 15-12-21 22:07:42.590 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:42.590 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 22 of 25 seconds left=================== 15-12-21 22:07:42.602 -05 000000084 INF: ===================Frame #835=================== 15-12-21 22:07:42.635 -05 000000055 INF: ===================Frame #837=================== 15-12-21 22:07:42.752 -05 000000084 INF: ===================Frame #846=================== 15-12-21 22:07:42.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:42.785 -05 000000055 INF: ===================Frame #849=================== 15-12-21 22:07:42.800 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:42.800 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:42.905 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:42.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:42.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:42.935 -05 000000055 INF: ===================Frame #861=================== 15-12-21 22:07:42.944 -05 000000084 INF: ===================Frame #862=================== 15-12-21 22:07:43.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:43.085 -05 000000055 INF: ===================Frame #873=================== 15-12-21 22:07:43.111 -05 000000084 INF: ===================Frame #875=================== 15-12-21 22:07:43.114 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:43.114 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:43.236 -05 000000055 INF: ===================Frame #885=================== 15-12-21 22:07:43.263 -05 000000084 INF: ===================Frame #887=================== 15-12-21 22:07:43.386 -05 000000055 INF: ===================Frame #897=================== 15-12-21 22:07:43.413 -05 000000084 INF: ===================Frame #899=================== 15-12-21 22:07:43.537 -05 000000055 INF: ===================Frame #908=================== 15-12-21 22:07:43.563 -05 000000084 INF: ===================Frame #911=================== 15-12-21 22:07:43.590 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:43.590 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 21 of 25 seconds left=================== 15-12-21 22:07:43.656 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:43.673 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 63.018C:A1\r\n 15-12-21 22:07:43.673 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:43.713 -05 000000084 INF: ===================Frame #922=================== 15-12-21 22:07:43.773 -05 000000055 INF: ===================Frame #927=================== 15-12-21 22:07:43.924 -05 000000055 INF: ===================Frame #939=================== 15-12-21 22:07:43.925 -05 000000084 INF: ===================Frame #939=================== 15-12-21 22:07:44.075 -05 000000084 INF: ===================Frame #951=================== 15-12-21 22:07:44.075 -05 000000055 INF: ===================Frame #951=================== 15-12-21 22:07:44.226 -05 000000055 INF: ===================Frame #963=================== 15-12-21 22:07:44.226 -05 000000084 INF: ===================Frame #963=================== 15-12-21 22:07:44.342 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:44.377 -05 000000084 INF: ===================Frame #975=================== 15-12-21 22:07:44.377 -05 000000055 INF: ===================Frame #975=================== 15-12-21 22:07:44.421 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:44.421 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:44.527 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:44.528 -05 000000055 INF: ===================Frame #987=================== 15-12-21 22:07:44.528 -05 000000084 INF: ===================Frame #987=================== 15-12-21 22:07:44.548 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.966C:A1\r\n 15-12-21 22:07:44.548 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:44.590 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:44.590 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 20 of 25 seconds left=================== 15-12-21 22:07:44.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:44.673 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:44.673 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:44.679 -05 000000055 INF: ===================Frame #999=================== 15-12-21 22:07:44.679 -05 000000084 INF: ===================Frame #999=================== 15-12-21 22:07:44.774 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:44.797 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:44.797 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:44.830 -05 000000084 INF: ===================Frame #1011=================== 15-12-21 22:07:44.830 -05 000000055 INF: ===================Frame #1011=================== 15-12-21 22:07:44.981 -05 000000084 INF: ===================Frame #1023=================== 15-12-21 22:07:44.981 -05 000000055 INF: ===================Frame #1023=================== 15-12-21 22:07:45.131 -05 000000084 INF: ===================Frame #1035=================== 15-12-21 22:07:45.132 -05 000000055 INF: ===================Frame #1035=================== 15-12-21 22:07:45.281 -05 000000084 INF: ===================Frame #1046=================== 15-12-21 22:07:45.282 -05 000000055 INF: ===================Frame #1046=================== 15-12-21 22:07:45.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:45.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 19 of 25 seconds left=================== 15-12-21 22:07:45.659 -05 000000084 INF: ===================Frame #1076=================== 15-12-21 22:07:45.677 -05 000000055 INF: ===================Frame #1078=================== 15-12-21 22:07:45.850 -05 000000084 INF: ===================Frame #1091=================== 15-12-21 22:07:45.870 -05 000000055 INF: ===================Frame #1093=================== 15-12-21 22:07:46.000 -05 000000084 INF: ===================Frame #1103=================== 15-12-21 22:07:46.020 -05 000000055 INF: ===================Frame #1105=================== 15-12-21 22:07:46.021 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:46.043 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:46.043 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:46.144 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:46.150 -05 000000084 INF: ===================Frame #1115=================== 15-12-21 22:07:46.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:46.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:46.170 -05 000000055 INF: ===================Frame #1117=================== 15-12-21 22:07:46.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:46.300 -05 000000084 INF: ===================Frame #1127=================== 15-12-21 22:07:46.320 -05 000000055 INF: ===================Frame #1129=================== 15-12-21 22:07:46.356 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:46.356 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:46.450 -05 000000084 INF: ===================Frame #1139=================== 15-12-21 22:07:46.459 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:46.470 -05 000000055 INF: ===================Frame #1140=================== 15-12-21 22:07:46.480 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:07:46.480 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:46.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:46.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 18 of 25 seconds left=================== 15-12-21 22:07:46.600 -05 000000084 INF: ===================Frame #1151=================== 15-12-21 22:07:46.683 -05 000000055 INF: ===================Frame #1157=================== 15-12-21 22:07:46.750 -05 000000084 INF: ===================Frame #1163=================== 15-12-21 22:07:46.833 -05 000000055 INF: ===================Frame #1169=================== 15-12-21 22:07:46.900 -05 000000084 INF: ===================Frame #1174=================== 15-12-21 22:07:46.983 -05 000000055 INF: ===================Frame #1181=================== 15-12-21 22:07:47.134 -05 000000055 INF: ===================Frame #1193=================== 15-12-21 22:07:47.146 -05 000000084 INF: ===================Frame #1194=================== 15-12-21 22:07:47.284 -05 000000055 INF: ===================Frame #1205=================== 15-12-21 22:07:47.315 -05 000000084 INF: ===================Frame #1207=================== 15-12-21 22:07:47.434 -05 000000055 INF: ===================Frame #1217=================== 15-12-21 22:07:47.465 -05 000000084 INF: ===================Frame #1219=================== 15-12-21 22:07:47.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:47.585 -05 000000055 INF: ===================Frame #1229=================== 15-12-21 22:07:47.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:47.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 17 of 25 seconds left=================== 15-12-21 22:07:47.605 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:47.605 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:47.615 -05 000000084 INF: ===================Frame #1231=================== 15-12-21 22:07:47.713 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:47.729 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:47.729 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:47.735 -05 000000055 INF: ===================Frame #1240=================== 15-12-21 22:07:47.765 -05 000000084 INF: ===================Frame #1243=================== 15-12-21 22:07:47.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:47.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:47.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:47.913 -05 000000023 INF: FPGA: Recv TDIYWAIT 15-12-21 22:07:47.914 -05 000000064 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:47.915 -05 000000084 INF: ===================Frame #1250=================== 15-12-21 22:07:47.919 -05 000000064 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:07:47.923 -05 000000063 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:07:47.925 -05 000000063 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:07:47.925 -05 000000063 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:07:47.925 -05 000000063 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:07:47.925 -05 000000063 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:07:47.926 -05 000000037 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:07:47.928 -05 000000037 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:07:47.928 -05 000000037 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:07:47.928 -05 000000037 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:07:47.929 -05 000000037 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:07:47.983 -05 000000084 INF: Camera complete - got 1250 frames. 15-12-21 22:07:47.984 -05 000000084 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:07:48.102 -05 000000056 INF: FPGA: Recv EX1MV 15-12-21 22:07:48.102 -05 000000063 INF: Excitation Filter 1: Moved 36 steps in 177.0674 ms 15-12-21 22:07:48.102 -05 000000063 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 177.1618 ms 15-12-21 22:07:48.102 -05 000000063 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 177.2379 ms 15-12-21 22:07:48.103 -05 000000063 INF: ====================================== 15-12-21 22:07:48.323 -05 000000084 INF: ===================Camera TDI=================== 15-12-21 22:07:48.323 -05 000000055 INF: ===================Frame #1250=================== 15-12-21 22:07:48.335 -05 000000055 INF: Camera complete - got 1250 frames. 15-12-21 22:07:48.336 -05 000000055 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:07:48.350 -05 000000092 INF: FPGA: Recv EX2MV 15-12-21 22:07:48.350 -05 000000037 INF: Excitation Filter 2: Moved 107 steps in 422.1362 ms 15-12-21 22:07:48.350 -05 000000037 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 422.2349 ms 15-12-21 22:07:48.350 -05 000000037 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 422.3283 ms 15-12-21 22:07:48.351 -05 000000037 INF: ====================================== 15-12-21 22:07:48.353 -05 000000064 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:48.354 -05 000000064 INF: ====================================== 15-12-21 22:07:48.360 -05 000000084 INF: ====================================== 15-12-21 22:07:48.463 -05 000000055 INF: ===================Camera TDI=================== 15-12-21 22:07:48.482 -05 000000055 INF: ====================================== 15-12-21 22:07:48.484 -05 000000047 INF: ===================Camera TDI=================== 15-12-21 22:07:48.490 -05 000000047 INF: ====================================== 15-12-21 22:07:48.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:48.593 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 16 of 25 seconds left=================== 15-12-21 22:07:48.668 -05 000000028 INF: Y Motor: Moved to 9.0764 after 16957 ms 15-12-21 22:07:48.668 -05 000000028 INF: ====================================== 15-12-21 22:07:48.670 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:48.673 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:48.674 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:48.675 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:07:48.726 -05 000000009 INF: FPGA: Recv TDICLINES 10267 15-12-21 22:07:48.726 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:07:48.772 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:48.788 -05 000000028 INF: FPGA: Recv TDIYERD 907645 15-12-21 22:07:48.788 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:07:48.850 -05 000000041 INF: FPGA: Recv ZADCR 37908 15-12-21 22:07:48.851 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.144. Y moved -60.304 mm 15-12-21 22:07:48.851 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:07:48.852 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.280C:A1\r\n 15-12-21 22:07:48.852 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:48.913 -05 000000022 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:07:48.913 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:07:48.913 -05 000000057 INF: TDIScan finished after 22371.5624 ms 15-12-21 22:07:48.913 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:07:48.913 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:07:48.915 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:48.943 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.872 um 15-12-21 22:07:48.943 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:48.945 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:48.949 -05 000000043 INF: ===================Dither Clean Up Command=================== 15-12-21 22:07:48.949 -05 000000056 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:07:48.949 -05 000000009 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:07:48.949 -05 000000056 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:07:48.951 -05 000000029 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:07:48.952 -05 000000029 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:07:48.952 -05 000000029 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:07:48.952 -05 000000034 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:07:48.952 -05 000000068 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:48.959 -05 000000068 INF: ===================LFT:Extracting coords=================== 15-12-21 22:07:48.964 -05 000000034 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:07:48.994 -05 000000068 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:48.995 -05 000000068 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:07:48.999 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:48.999 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:48.999 -05 000000048 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:48.999 -05 000000028 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:48.999 -05 000000022 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:49.000 -05 000000048 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:49.000 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:49.000 -05 000000086 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:07:49.036 -05 000000037 INF: FPGA: Recv ZSTEP 15-12-21 22:07:49.037 -05 000000037 INF: FPGA: Recv ZSEL 15-12-21 22:07:49.037 -05 000000056 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:07:49.037 -05 000000034 INF: FPGA: Xmit ZDACW 42654\n 15-12-21 22:07:49.037 -05 000000029 INF: ====================================== 15-12-21 22:07:49.038 -05 000000056 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:07:49.038 -05 000000009 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:07:49.038 -05 000000056 INF: ====================================== 15-12-21 22:07:49.101 -05 000000047 INF: FPGA: Recv ZDACW 15-12-21 22:07:49.102 -05 000000009 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:07:49.102 -05 000000034 INF: ====================================== 15-12-21 22:07:49.103 -05 000000009 INF: ====================================== 15-12-21 22:07:49.148 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:49.165 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:49.165 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:49.178 -05 000000048 INF: LFT found best fwhm score 3.052289 in 127 ms 15-12-21 22:07:49.178 -05 000000048 INF: LFT found good score at index 3929 with fwhm value 3.052289. Next cycle, cycle 40 starting Z position for top surface is at -0.165 mm FC:A, C:39,L:2,T 15-12-21 22:07:49.179 -05 000000028 INF: LFT found best fwhm score 2.915774 in 127 ms 15-12-21 22:07:49.179 -05 000000028 INF: LFT found good score at index 3265 with fwhm value 2.915774. Next cycle, cycle 40 starting Z position for top surface is at -0.165 mm FC:A, C:39,L:2,T 15-12-21 22:07:49.179 -05 000000048 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:49.179 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:49.179 -05 000000048 INF: ====================================== 15-12-21 22:07:49.179 -05 000000028 INF: ====================================== 15-12-21 22:07:49.179 -05 000000022 INF: LFT found best fwhm score 2.816149 in 127 ms 15-12-21 22:07:49.179 -05 000000022 INF: LFT found good score at index 8717 with fwhm value 2.816149. Next cycle, cycle 40 starting Z position for top surface is at -0.164 mm FC:A, C:39,L:2,T 15-12-21 22:07:49.180 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:49.180 -05 000000022 INF: ====================================== 15-12-21 22:07:49.188 -05 000000086 INF: LFT found best fwhm score 2.854959 in 135 ms 15-12-21 22:07:49.188 -05 000000086 INF: LFT found good score at index 1985 with fwhm value 2.854959. Next cycle, cycle 40 starting Z position for top surface is at -0.165 mm FC:A, C:39,L:2,T 15-12-21 22:07:49.188 -05 000000086 INF: ===================LookupFocusTracking=================== 15-12-21 22:07:49.189 -05 000000086 INF: ====================================== 15-12-21 22:07:49.191 -05 000000068 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:07:49.192 -05 000000068 INF: LFT weighted average best Z for top surface is at -0.165mm FC:A, C:39,L:2,T 15-12-21 22:07:49.192 -05 000000068 INF: ====================================== 15-12-21 22:07:49.195 -05 000000043 INF: ====================================== 15-12-21 22:07:49.198 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:49.199 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:07:49.202 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:49.202 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:07:49.202 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:49.202 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:07:49.202 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:49.203 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:07:49.203 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:49.203 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:07:49.203 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:07:49.204 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:07:49.204 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:07:49.204 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 16 of 25 seconds left, Waiting for image analysis=================== 15-12-21 22:07:49.205 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 16 of 25 seconds left=================== 15-12-21 22:07:49.205 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:07:49.207 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:49.208 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:49.208 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:49.209 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:07:49.210 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface, Lane 2=================== 15-12-21 22:07:49.210 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Top Surface=================== 15-12-21 22:07:49.210 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:07:49.211 -05 000000076 INF: ===================Registering and Extracting C039 L002 T1201=================== 15-12-21 22:07:49.211 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface=================== 15-12-21 22:07:49.211 -05 000000075 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202=================== 15-12-21 22:07:49.212 -05 000000089 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203=================== 15-12-21 22:07:49.213 -05 000000060 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204=================== 15-12-21 22:07:49.213 -05 000000011 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205=================== 15-12-21 22:07:49.214 -05 000000066 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206=================== 15-12-21 22:07:49.214 -05 000000038 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207=================== 15-12-21 22:07:49.215 -05 000000077 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207, Registering and Extracting C039 L002 T1208=================== 15-12-21 22:07:49.220 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface=================== 15-12-21 22:07:49.226 -05 000000057 INF: Compensator: Moving OutOfPath 15-12-21 22:07:49.226 -05 000000057 INF: FPGA: Xmit MIOCOMPR\n 15-12-21 22:07:49.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:49.290 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:49.290 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:49.482 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:49.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:49.538 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:49.583 -05 000000063 INF: FPGA: Recv MIOCOMPR 15-12-21 22:07:49.583 -05 000000057 INF: Compensator: Moved OutOfPath in 357 ms 15-12-21 22:07:49.585 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface=================== 15-12-21 22:07:49.593 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:49.594 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 15 of 25 seconds left=================== 15-12-21 22:07:49.612 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:07:49.613 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:07:49.614 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:07:49.620 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:07:49.622 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:07:49.622 -05 000000057 INF: Compensator: Remaining OutOfPath 15-12-21 22:07:49.622 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:07:49.624 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:07:49.684 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:49.705 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:07:49.722 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:07:49.738 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:49.738 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:07:49.739 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:49.739 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -162.7 um, section = A_1 15-12-21 22:07:49.742 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.998C:A1\r\n 15-12-21 22:07:49.742 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:49.754 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:49.755 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:49.812 -05 000000049 INF: ===================MoveEmissionFilters=================== 15-12-21 22:07:49.821 -05 000000033 INF: ===================Move X,Y=================== 15-12-21 22:07:49.821 -05 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:07:49.821 -05 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:07:49.822 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:07:49.827 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:07:49.827 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:49.830 -05 000000033 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:07:49.830 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:07:49.830 -05 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:07:49.831 -05 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:07:49.831 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:07:49.831 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:07:49.836 -05 000000045 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:07:49.836 -05 000000045 INF: Z Motor: Moving to -0.1111 mm, started at -0.1627 mm 15-12-21 22:07:49.836 -05 000000045 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:07:49.840 -05 000000028 INF: ===================Move Y Motor without settling=================== 15-12-21 22:07:49.840 -05 000000087 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:07:49.840 -05 000000041 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:07:49.840 -05 000000055 INF: ===================Move X Motor without settling=================== 15-12-21 22:07:49.840 -05 000000054 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:07:49.840 -05 000000028 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:07:49.840 -05 000000043 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:07:49.841 -05 000000055 INF: X Motor: Xmit PR VM\n 15-12-21 22:07:49.841 -05 000000025 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:07:49.841 -05 000000079 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:07:49.841 -05 000000028 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:07:49.841 -05 000000023 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:07:49.841 -05 000000037 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:07:49.841 -05 000000043 INF: ====================================== 15-12-21 22:07:49.842 -05 000000079 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:07:49.842 -05 000000037 INF: ====================================== 15-12-21 22:07:49.846 -05 000000023 INF: ====================================== 15-12-21 22:07:49.847 -05 000000087 INF: ====================================== 15-12-21 22:07:49.847 -05 000000028 INF: Y Motor: Xmit 1G\n 15-12-21 22:07:49.850 -05 000000025 INF: ====================================== 15-12-21 22:07:49.851 -05 000000041 INF: ====================================== 15-12-21 22:07:49.851 -05 000000054 INF: ====================================== 15-12-21 22:07:49.851 -05 000000034 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:07:49.852 -05 000000068 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:07:49.892 -05 000000029 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:07:49.917 -05 000000078 INF: FPGA: Recv ZTRG 15-12-21 22:07:49.917 -05 000000045 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:07:49.917 -05 000000079 INF: ====================================== 15-12-21 22:07:49.918 -05 000000055 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:07:49.918 -05 000000055 INF: X Motor: Xmit PR VI\n 15-12-21 22:07:49.918 -05 000000028 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:07:49.921 -05 000000028 INF: Y Motor: Recv 1G\r\n 15-12-21 22:07:49.922 -05 000000034 INF: ====================================== 15-12-21 22:07:49.922 -05 000000068 INF: ====================================== 15-12-21 22:07:49.922 -05 000000061 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:07:49.923 -05 000000029 INF: ====================================== 15-12-21 22:07:49.923 -05 000000028 INF: Y Motor: Xmit 1D\n 15-12-21 22:07:49.924 -05 000000061 INF: ====================================== 15-12-21 22:07:49.960 -05 000000049 INF: ====================================== 15-12-21 22:07:49.990 -05 000000084 INF: FPGA: Recv ZYT 15-12-21 22:07:49.990 -05 000000045 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:07:49.990 -05 000000045 INF: FPGA: Xmit ZMV 29127\n 15-12-21 22:07:49.991 -05 000000028 INF: Y Motor: Recv 1D\r\n 15-12-21 22:07:49.994 -05 000000055 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:07:49.994 -05 000000055 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:07:49.994 -05 000000028 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:07:49.994 -05 000000055 INF: X Motor: Moving to 12.8720 mm @15.000 mm/sec, started at 17.9380 mm 15-12-21 22:07:49.995 -05 000000055 INF: X Motor: Xmit MA -18894\n 15-12-21 22:07:49.996 -05 000000028 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:07:50.067 -05 000000064 INF: FPGA: Recv ZMV 15-12-21 22:07:50.067 -05 000000045 INF: Z Motor: MoveAndTrigger 'ZMV' command took 76.8603 ms 15-12-21 22:07:50.067 -05 000000045 INF: FPGA: Xmit ZDACR\n 15-12-21 22:07:50.069 -05 000000055 INF: X Motor: Recv MA -18894\r\n> 15-12-21 22:07:50.072 -05 000000055 INF: X Motor: WaitUntilStopped 60338 15-12-21 22:07:50.142 -05 000000043 INF: FPGA: Recv ZDACR 29127 15-12-21 22:07:50.142 -05 000000045 INF: Z Motor: MoveAndTrigger took 306.0542 ms w/comms 15-12-21 22:07:50.142 -05 000000045 INF: Z Motor: After move to -0.1111, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:07:50.142 -05 000000045 INF: Z Motor: MoveAbsStepped took 306.1746 ms 15-12-21 22:07:50.178 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:50.266 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:07:50.320 -05 000000009 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:50.320 -05 000000047 INF: ===================Camera Arm TDI=================== 15-12-21 22:07:50.346 -05 000000009 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:50.351 -05 000000009 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:07:50.354 -05 000000009 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:07:50.354 -05 000000009 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:07:50.369 -05 000000084 INF: FPGA: Recv ZSEL 15-12-21 22:07:50.371 -05 000000009 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:07:50.371 -05 000000009 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:50.375 -05 000000009 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:07:50.375 -05 000000009 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:07:50.375 -05 000000009 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:07:50.426 -05 000000037 INF: FPGA: Recv ZSTEP 15-12-21 22:07:50.427 -05 000000009 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:50.469 -05 000000009 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:07:50.470 -05 000000009 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:50.509 -05 000000009 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:07:50.510 -05 000000009 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:07:50.510 -05 000000009 INF: Z Motor: Arming to move to -0.0711 mm 15-12-21 22:07:50.510 -05 000000009 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:07:50.565 -05 000000054 INF: FPGA: Recv ZYT 15-12-21 22:07:50.565 -05 000000009 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1075156 enc / 10.752 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:07:50.565 -05 000000009 INF: FPGA: Xmit ZARM 18641\n 15-12-21 22:07:50.602 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:50.602 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 14 of 25 seconds left=================== 15-12-21 22:07:50.627 -05 000000074 INF: FPGA: Recv ZARM 15-12-21 22:07:50.627 -05 000000009 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.9447 ms 15-12-21 22:07:50.627 -05 000000009 INF: Z Motor: ArmAbsStepped took 117.6146 ms 15-12-21 22:07:50.628 -05 000000009 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:07:50.645 -05 000000009 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:50.653 -05 000000009 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:07:50.666 -05 000000009 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:50.684 -05 000000009 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:07:50.685 -05 000000009 INF: ===================TDI Scan Setup=================== 15-12-21 22:07:50.701 -05 000000009 INF: ====================================== 15-12-21 22:07:50.916 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:50.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:50.975 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:51.047 -05 000000055 INF: X Motor: Xmit PR ER\n 15-12-21 22:07:51.099 -05 000000055 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:07:51.099 -05 000000055 INF: X Motor: Moved to 12.8696 after 1027 ms 15-12-21 22:07:51.101 -05 000000055 INF: ====================================== 15-12-21 22:07:51.217 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:51.241 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:51.241 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:51.436 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:51.489 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:51.489 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:51.602 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:51.602 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 13 of 25 seconds left=================== 15-12-21 22:07:51.607 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:51.675 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:07:51.675 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:52.140 -05 000000047 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:07:52.141 -05 000000047 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:07:52.141 -05 000000047 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:07:52.603 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:52.603 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 12 of 25 seconds left=================== 15-12-21 22:07:52.787 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:52.864 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:52.864 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:52.976 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:52.988 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:52.988 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:53.099 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:53.112 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:53.112 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:53.604 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:53.605 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 11 of 25 seconds left=================== 15-12-21 22:07:53.672 -05 000000047 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:07:53.672 -05 000000047 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:07:53.672 -05 000000047 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:07:53.674 -05 000000047 INF: ====================================== 15-12-21 22:07:53.677 -05 000000045 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:07:53.682 -05 000000045 INF: ====================================== 15-12-21 22:07:53.738 -05 000000028 INF: Y Motor: Moved to 70.6885 after 3740 ms 15-12-21 22:07:53.739 -05 000000028 INF: ====================================== 15-12-21 22:07:53.740 -05 000000033 INF: ===================Move X,Y=================== 15-12-21 22:07:53.745 -05 000000033 INF: ====================================== 15-12-21 22:07:53.747 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:07:53.753 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:53.765 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:07:53.797 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:07:53.798 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:07:53.837 -05 000000089 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207=================== 15-12-21 22:07:53.861 -05 000000092 INF: FPGA: Recv ZFREQCL 15-12-21 22:07:53.862 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:07:53.862 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:53.863 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:07:53.923 -05 000000029 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:07:53.923 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:07:53.924 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:53.925 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:53.930 -05 000000036 INF: ===================TDI FPGA Arm=================== 15-12-21 22:07:53.930 -05 000000037 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:07:53.930 -05 000000037 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:07:53.934 -05 000000036 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:53.937 -05 000000036 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:07:53.938 -05 000000036 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:07:53.939 -05 000000040 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207, Registering and Extracting C039 L002 T1209=================== 15-12-21 22:07:53.965 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:53.985 -05 000000041 INF: FPGA: Recv TDIYPOS 15-12-21 22:07:53.986 -05 000000036 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:53.987 -05 000000037 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:07:53.988 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.916C:A1\r\n 15-12-21 22:07:53.988 -05 000000037 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:07:53.988 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:53.988 -05 000000037 INF: ====================================== 15-12-21 22:07:53.991 -05 000000036 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:07:53.992 -05 000000036 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:07:54.049 -05 000000034 INF: FPGA: Recv TDIYARM3 15-12-21 22:07:54.050 -05 000000036 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:07:54.052 -05 000000036 INF: ===================TDI FPGA Arm=================== 15-12-21 22:07:54.054 -05 000000036 INF: ====================================== 15-12-21 22:07:54.056 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:07:54.058 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:07:54.058 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:54.059 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:54.060 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:54.061 -05 000000028 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:07:54.061 -05 000000028 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:07:54.062 -05 000000028 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:07:54.062 -05 000000028 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:07:54.062 -05 000000028 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:07:54.063 -05 000000082 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:07:54.063 -05 000000082 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:07:54.063 -05 000000082 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:07:54.063 -05 000000082 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:07:54.064 -05 000000082 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:07:54.072 -05 000000011 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207=================== 15-12-21 22:07:54.220 -05 000000064 INF: FPGA: Recv EX1MV 15-12-21 22:07:54.221 -05 000000028 INF: Excitation Filter 1: Moved -36 steps in 159.6193 ms 15-12-21 22:07:54.221 -05 000000028 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 159.8316 ms 15-12-21 22:07:54.221 -05 000000028 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 160.0248 ms 15-12-21 22:07:54.222 -05 000000051 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207, Registering and Extracting C039 L002 T1210=================== 15-12-21 22:07:54.223 -05 000000028 INF: ====================================== 15-12-21 22:07:54.293 -05 000000066 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207=================== 15-12-21 22:07:54.322 -05 000000027 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207, Registering and Extracting C039 L002 T1211=================== 15-12-21 22:07:54.389 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:54.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:54.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:54.467 -05 000000090 INF: FPGA: Recv EX2MV 15-12-21 22:07:54.467 -05 000000082 INF: Excitation Filter 2: Moved -107 steps in 403.9413 ms 15-12-21 22:07:54.467 -05 000000082 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 404.0692 ms 15-12-21 22:07:54.467 -05 000000082 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 404.1703 ms 15-12-21 22:07:54.468 -05 000000082 INF: ====================================== 15-12-21 22:07:54.471 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:54.517 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:07:54.521 -05 000000041 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:07:54.521 -05 000000064 INF: ===================Camera TDI=================== 15-12-21 22:07:54.522 -05 000000055 INF: ===================Move Y Motor without settling=================== 15-12-21 22:07:54.522 -05 000000037 INF: ===================FPGA Z Wait=================== 15-12-21 22:07:54.525 -05 000000055 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:07:54.526 -05 000000037 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:07:54.526 -05 000000055 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:07:54.527 -05 000000041 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:07:54.527 -05 000000064 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:07:54.531 -05 000000041 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:07:54.537 -05 000000055 INF: Y Motor: Xmit 1G\n 15-12-21 22:07:54.538 -05 000000036 INF: ===================Camera TDI=================== 15-12-21 22:07:54.538 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 22:07:54.569 -05 000000076 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207=================== 15-12-21 22:07:54.583 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:54.592 -05 000000055 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:07:54.593 -05 000000055 INF: Y Motor: Recv 1G\r\n 15-12-21 22:07:54.594 -05 000000055 INF: Y Motor: Xmit 1D\n 15-12-21 22:07:54.605 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:54.605 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 10 of 25 seconds left=================== 15-12-21 22:07:54.633 -05 000000088 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207, Registering and Extracting C039 L002 T1212=================== 15-12-21 22:07:54.656 -05 000000055 INF: Y Motor: Recv 1D\r\n 15-12-21 22:07:54.657 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:54.657 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:54.657 -05 000000055 INF: Y Motor: Recv *407662\r\n 15-12-21 22:07:54.658 -05 000000055 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:07:54.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:54.847 -05 000000033 INF: FPGA: Recv ZWAIT 15-12-21 22:07:54.848 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:54.848 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:54.848 -05 000000037 INF: ====================================== 15-12-21 22:07:54.937 -05 000000075 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1207=================== 15-12-21 22:07:55.012 -05 000000060 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206=================== 15-12-21 22:07:55.013 -05 000000023 INF: ===================Frame #3=================== 15-12-21 22:07:55.013 -05 000000036 INF: ===================Frame #3=================== 15-12-21 22:07:55.036 -05 000000031 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1213, Registering and Extracting C039 L002 T1214=================== 15-12-21 22:07:55.036 -05 000000072 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1213, Registering and Extracting C039 L002 T1214=================== 15-12-21 22:07:55.073 -05 000000038 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1213=================== 15-12-21 22:07:55.137 -05 000000044 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1213, Registering and Extracting C039 L002 T1215=================== 15-12-21 22:07:55.163 -05 000000077 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1213=================== 15-12-21 22:07:55.165 -05 000000036 INF: ===================Frame #14=================== 15-12-21 22:07:55.165 -05 000000023 INF: ===================Frame #14=================== 15-12-21 22:07:55.237 -05 000000020 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1213, Registering and Extracting C039 L002 T1216=================== 15-12-21 22:07:55.252 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:07:55.280 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.022C:A1\r\n 15-12-21 22:07:55.280 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:55.482 -05 000000023 INF: ===================Frame #40=================== 15-12-21 22:07:55.485 -05 000000036 INF: ===================Frame #40=================== 15-12-21 22:07:55.606 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:55.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 9 of 25 seconds left=================== 15-12-21 22:07:55.922 -05 000000023 INF: ===================Frame #74=================== 15-12-21 22:07:55.923 -05 000000036 INF: ===================Frame #74=================== 15-12-21 22:07:56.228 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:56.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:56.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:56.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:56.498 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:56.498 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:56.538 -05 000000036 INF: ===================Frame #123=================== 15-12-21 22:07:56.576 -05 000000023 INF: ===================Frame #126=================== 15-12-21 22:07:56.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:56.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 8 of 25 seconds left=================== 15-12-21 22:07:56.627 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:56.689 -05 000000036 INF: ===================Frame #135=================== 15-12-21 22:07:56.700 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:56.700 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:56.840 -05 000000036 INF: ===================Frame #147=================== 15-12-21 22:07:56.844 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:07:56.856 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 22:07:56.882 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:56.996 -05 000000036 INF: ===================Frame #159=================== 15-12-21 22:07:57.150 -05 000000036 INF: ===================Frame #171=================== 15-12-21 22:07:57.302 -05 000000036 INF: ===================Frame #183=================== 15-12-21 22:07:57.364 -05 000000023 INF: ===================Frame #188=================== 15-12-21 22:07:57.452 -05 000000036 INF: ===================Frame #195=================== 15-12-21 22:07:57.604 -05 000000036 INF: ===================Frame #207=================== 15-12-21 22:07:57.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:57.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 7 of 25 seconds left=================== 15-12-21 22:07:57.640 -05 000000023 INF: ===================Frame #210=================== 15-12-21 22:07:57.755 -05 000000036 INF: ===================Frame #219=================== 15-12-21 22:07:57.840 -05 000000023 INF: ===================Frame #226=================== 15-12-21 22:07:57.906 -05 000000036 INF: ===================Frame #231=================== 15-12-21 22:07:57.908 -05 000000040 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206, Registering and Extracting C039 L002 T1213=================== 15-12-21 22:07:57.984 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:57.995 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:57.995 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:58.048 -05 000000023 INF: ===================Frame #242=================== 15-12-21 22:07:58.056 -05 000000036 INF: ===================Frame #243=================== 15-12-21 22:07:58.107 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:58.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:58.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:58.206 -05 000000036 INF: ===================Frame #255=================== 15-12-21 22:07:58.221 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:58.239 -05 000000023 INF: ===================Frame #258=================== 15-12-21 22:07:58.243 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:58.243 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:58.357 -05 000000036 INF: ===================Frame #267=================== 15-12-21 22:07:58.419 -05 000000023 INF: ===================Frame #272=================== 15-12-21 22:07:58.508 -05 000000036 INF: ===================Frame #279=================== 15-12-21 22:07:58.572 -05 000000027 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205, Registering and Extracting C039 L002 T1206=================== 15-12-21 22:07:58.596 -05 000000023 INF: ===================Frame #286=================== 15-12-21 22:07:58.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:58.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 6 of 25 seconds left=================== 15-12-21 22:07:58.659 -05 000000036 INF: ===================Frame #291=================== 15-12-21 22:07:58.770 -05 000000023 INF: ===================Frame #299=================== 15-12-21 22:07:58.810 -05 000000036 INF: ===================Frame #303=================== 15-12-21 22:07:58.883 -05 000000051 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204, Registering and Extracting C039 L002 T1205=================== 15-12-21 22:07:58.921 -05 000000023 INF: ===================Frame #311=================== 15-12-21 22:07:58.926 -05 000000088 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203, Registering and Extracting C039 L002 T1204=================== 15-12-21 22:07:58.961 -05 000000036 INF: ===================Frame #315=================== 15-12-21 22:07:59.071 -05 000000023 INF: ===================Frame #323=================== 15-12-21 22:07:59.107 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:07:59.111 -05 000000036 INF: ===================Frame #327=================== 15-12-21 22:07:59.181 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.683C:A1\r\n 15-12-21 22:07:59.181 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:59.222 -05 000000023 INF: ===================Frame #335=================== 15-12-21 22:07:59.261 -05 000000036 INF: ===================Frame #338=================== 15-12-21 22:07:59.373 -05 000000023 INF: ===================Frame #347=================== 15-12-21 22:07:59.468 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:07:59.491 -05 000000072 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202, Registering and Extracting C039 L002 T1203=================== 15-12-21 22:07:59.491 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:07:59.491 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:59.524 -05 000000023 INF: ===================Frame #359=================== 15-12-21 22:07:59.530 -05 000000031 INF: ===================Registering and Extracting C039 L002 T1201, Registering and Extracting C039 L002 T1202=================== 15-12-21 22:07:59.550 -05 000000044 INF: ===================Registering and Extracting C039 L002 T1201=================== 15-12-21 22:07:59.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:07:59.608 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:07:59.608 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 5 of 25 seconds left=================== 15-12-21 22:07:59.609 -05 000000020 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:07:59.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:59.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:59.675 -05 000000023 INF: ===================Frame #371=================== 15-12-21 22:07:59.712 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:59.717 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:07:59.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:07:59.742 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:07:59.742 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:07:59.756 -05 000000036 INF: ===================Frame #378=================== 15-12-21 22:07:59.820 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:07:59.826 -05 000000023 INF: ===================Frame #383=================== 15-12-21 22:07:59.828 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:07:59.953 -05 000000036 INF: ===================Frame #393=================== 15-12-21 22:07:59.976 -05 000000023 INF: ===================Frame #395=================== 15-12-21 22:08:00.016 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:00.024 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:08:00.105 -05 000000036 INF: ===================Frame #405=================== 15-12-21 22:08:00.126 -05 000000023 INF: ===================Frame #407=================== 15-12-21 22:08:00.136 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:00.141 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:08:00.256 -05 000000036 INF: ===================Frame #417=================== 15-12-21 22:08:00.276 -05 000000023 INF: ===================Frame #419=================== 15-12-21 22:08:00.314 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:00.391 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:00.407 -05 000000036 INF: ===================Frame #429=================== 15-12-21 22:08:00.426 -05 000000023 INF: ===================Frame #431=================== 15-12-21 22:08:00.429 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.048C:A1\r\n 15-12-21 22:08:00.429 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:00.557 -05 000000036 INF: ===================Frame #441=================== 15-12-21 22:08:00.576 -05 000000023 INF: ===================Frame #442=================== 15-12-21 22:08:00.609 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:00.610 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 4 of 25 seconds left=================== 15-12-21 22:08:00.708 -05 000000036 INF: ===================Frame #453=================== 15-12-21 22:08:00.860 -05 000000036 INF: ===================Frame #465=================== 15-12-21 22:08:00.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:00.989 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:00.989 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:01.011 -05 000000036 INF: ===================Frame #477=================== 15-12-21 22:08:01.031 -05 000000023 INF: ===================Frame #478=================== 15-12-21 22:08:01.092 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:01.113 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:01.113 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:01.162 -05 000000036 INF: ===================Frame #489=================== 15-12-21 22:08:01.214 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:01.238 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:01.238 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:01.254 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:08:01.291 -05 000000023 INF: ===================Frame #499=================== 15-12-21 22:08:01.312 -05 000000036 INF: ===================Frame #501=================== 15-12-21 22:08:01.443 -05 000000023 INF: ===================Frame #511=================== 15-12-21 22:08:01.462 -05 000000036 INF: ===================Frame #512=================== 15-12-21 22:08:01.594 -05 000000023 INF: ===================Frame #523=================== 15-12-21 22:08:01.610 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:01.610 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 3 of 25 seconds left=================== 15-12-21 22:08:01.746 -05 000000023 INF: ===================Frame #535=================== 15-12-21 22:08:01.853 -05 000000036 INF: ===================Frame #543=================== 15-12-21 22:08:01.896 -05 000000023 INF: ===================Frame #547=================== 15-12-21 22:08:02.004 -05 000000036 INF: ===================Frame #555=================== 15-12-21 22:08:02.025 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:02.047 -05 000000023 INF: ===================Frame #559=================== 15-12-21 22:08:02.052 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:08:02.052 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:02.154 -05 000000036 INF: ===================Frame #567=================== 15-12-21 22:08:02.198 -05 000000023 INF: ===================Frame #570=================== 15-12-21 22:08:02.305 -05 000000036 INF: ===================Frame #579=================== 15-12-21 22:08:02.456 -05 000000036 INF: ===================Frame #591=================== 15-12-21 22:08:02.465 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:02.487 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:02.487 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:02.487 -05 000000023 INF: ===================Frame #593=================== 15-12-21 22:08:02.593 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:02.607 -05 000000036 INF: ===================Frame #603=================== 15-12-21 22:08:02.612 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:02.612 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 2 of 25 seconds left=================== 15-12-21 22:08:02.614 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:02.614 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:02.637 -05 000000023 INF: ===================Frame #605=================== 15-12-21 22:08:02.712 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:02.736 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:02.736 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:02.757 -05 000000036 INF: ===================Frame #615=================== 15-12-21 22:08:02.787 -05 000000023 INF: ===================Frame #617=================== 15-12-21 22:08:02.908 -05 000000036 INF: ===================Frame #627=================== 15-12-21 22:08:02.937 -05 000000023 INF: ===================Frame #629=================== 15-12-21 22:08:03.059 -05 000000036 INF: ===================Frame #639=================== 15-12-21 22:08:03.087 -05 000000023 INF: ===================Frame #641=================== 15-12-21 22:08:03.210 -05 000000036 INF: ===================Frame #651=================== 15-12-21 22:08:03.237 -05 000000023 INF: ===================Frame #653=================== 15-12-21 22:08:03.361 -05 000000036 INF: ===================Frame #662=================== 15-12-21 22:08:03.388 -05 000000023 INF: ===================Frame #665=================== 15-12-21 22:08:03.539 -05 000000023 INF: ===================Frame #676=================== 15-12-21 22:08:03.612 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:03.613 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 1 of 25 seconds left=================== 15-12-21 22:08:03.718 -05 000000036 INF: ===================Frame #691=================== 15-12-21 22:08:03.844 -05 000000023 INF: ===================Frame #701=================== 15-12-21 22:08:03.869 -05 000000036 INF: ===================Frame #703=================== 15-12-21 22:08:03.995 -05 000000023 INF: ===================Frame #713=================== 15-12-21 22:08:04.019 -05 000000036 INF: ===================Frame #714=================== 15-12-21 22:08:04.029 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:04.047 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:04.047 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:04.145 -05 000000023 INF: ===================Frame #724=================== 15-12-21 22:08:04.153 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:04.174 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:04.174 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:04.231 -05 000000036 INF: ===================Frame #731=================== 15-12-21 22:08:04.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:04.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:04.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:04.361 -05 000000023 INF: ===================Frame #741=================== 15-12-21 22:08:04.381 -05 000000036 INF: ===================Frame #743=================== 15-12-21 22:08:04.403 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:04.423 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.263C:A1\r\n 15-12-21 22:08:04.423 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:04.512 -05 000000023 INF: ===================Frame #753=================== 15-12-21 22:08:04.531 -05 000000036 INF: ===================Frame #755=================== 15-12-21 22:08:04.590 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:04.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:04.591 -05 000000062 INF: WaitCommand(25000) end 15-12-21 22:08:04.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:04.593 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:08:04.594 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:04.635 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:04.640 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 22:08:04.643 -05 000000062 INF: Valve B2: Go to position 5 15-12-21 22:08:04.644 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:08:04.663 -05 000000023 INF: ===================Frame #765=================== 15-12-21 22:08:04.682 -05 000000036 INF: ===================Frame #767=================== 15-12-21 22:08:04.686 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 1\r 15-12-21 22:08:04.688 -05 000000062 INF: Valve B2: 42.682 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:08:04.688 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 1 to 5 15-12-21 22:08:04.688 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW5\r 15-12-21 22:08:04.689 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:08:04.689 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:08:04.832 -05 000000023 INF: ===================Frame #779=================== 15-12-21 22:08:04.835 -05 000000036 INF: ===================Frame #779=================== 15-12-21 22:08:05.018 -05 000000023 INF: ===================Frame #791=================== 15-12-21 22:08:05.018 -05 000000036 INF: ===================Frame #791=================== 15-12-21 22:08:05.171 -05 000000023 INF: ===================Frame #806=================== 15-12-21 22:08:05.177 -05 000000036 INF: ===================Frame #806=================== 15-12-21 22:08:05.505 -05 000000023 INF: ===================Frame #832=================== 15-12-21 22:08:05.523 -05 000000036 INF: ===================Frame #833=================== 15-12-21 22:08:05.553 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:05.576 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.014C:A1\r\n 15-12-21 22:08:05.576 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:05.637 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 22:08:05.637 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:05.637 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:08:05.673 -05 000000036 INF: ===================Frame #845=================== 15-12-21 22:08:05.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:05.691 -05 000000023 INF: ===================Frame #847=================== 15-12-21 22:08:05.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:05.702 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:05.811 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:05.823 -05 000000036 INF: ===================Frame #857=================== 15-12-21 22:08:05.842 -05 000000023 INF: ===================Frame #859=================== 15-12-21 22:08:05.890 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:08:05.890 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:05.973 -05 000000036 INF: ===================Frame #869=================== 15-12-21 22:08:05.992 -05 000000023 INF: ===================Frame #870=================== 15-12-21 22:08:05.995 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:06.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:06.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:06.116 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:08:06.123 -05 000000036 INF: ===================Frame #881=================== 15-12-21 22:08:06.137 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:08:06.137 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:06.190 -05 000000023 INF: ===================Frame #886=================== 15-12-21 22:08:06.240 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:06.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:06.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:06.273 -05 000000036 INF: ===================Frame #893=================== 15-12-21 22:08:06.359 -05 000000023 INF: ===================Frame #899=================== 15-12-21 22:08:06.368 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:06.423 -05 000000036 INF: ===================Frame #905=================== 15-12-21 22:08:06.449 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:08:06.449 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:06.509 -05 000000023 INF: ===================Frame #911=================== 15-12-21 22:08:06.550 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:06.551 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:08:06.551 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:06.573 -05 000000036 INF: ===================Frame #916=================== 15-12-21 22:08:06.636 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:06.645 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:08:06.659 -05 000000023 INF: ===================Frame #923=================== 15-12-21 22:08:06.736 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:08:06.809 -05 000000023 INF: ===================Frame #935=================== 15-12-21 22:08:06.824 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 22:08:06.824 -05 000000062 INF: Current Position of Pump is: 21120 15-12-21 22:08:06.824 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:08:06.846 -05 000000036 INF: ===================Frame #938=================== 15-12-21 22:08:06.924 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P4608R\r 15-12-21 22:08:06.959 -05 000000023 INF: ===================Frame #947=================== 15-12-21 22:08:07.010 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:07.025 -05 000000036 INF: ===================Frame #952=================== 15-12-21 22:08:07.109 -05 000000023 INF: ===================Frame #959=================== 15-12-21 22:08:07.110 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:07.155 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:07.191 -05 000000036 INF: ===================Frame #965=================== 15-12-21 22:08:07.198 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:07.199 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:08:07.199 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:07.259 -05 000000023 INF: ===================Frame #971=================== 15-12-21 22:08:07.341 -05 000000036 INF: ===================Frame #977=================== 15-12-21 22:08:07.409 -05 000000023 INF: ===================Frame #983=================== 15-12-21 22:08:07.448 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:07.490 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:07.491 -05 000000036 INF: ===================Frame #989=================== 15-12-21 22:08:07.511 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:07.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:07.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:07.559 -05 000000023 INF: ===================Frame #994=================== 15-12-21 22:08:07.618 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:07.637 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:07.637 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:07.641 -05 000000036 INF: ===================Frame #1001=================== 15-12-21 22:08:07.740 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:07.760 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:07.760 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:07.761 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:07.791 -05 000000036 INF: ===================Frame #1013=================== 15-12-21 22:08:07.821 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:07.822 -05 000000023 INF: ===================Frame #1015=================== 15-12-21 22:08:07.941 -05 000000036 INF: ===================Frame #1025=================== 15-12-21 22:08:07.972 -05 000000023 INF: ===================Frame #1027=================== 15-12-21 22:08:08.071 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:08.091 -05 000000036 INF: ===================Frame #1036=================== 15-12-21 22:08:08.122 -05 000000023 INF: ===================Frame #1039=================== 15-12-21 22:08:08.135 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:08.273 -05 000000023 INF: ===================Frame #1051=================== 15-12-21 22:08:08.332 -05 000000036 INF: ===================Frame #1055=================== 15-12-21 22:08:08.387 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:08.423 -05 000000023 INF: ===================Frame #1063=================== 15-12-21 22:08:08.445 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:08.482 -05 000000036 INF: ===================Frame #1067=================== 15-12-21 22:08:08.573 -05 000000023 INF: ===================Frame #1075=================== 15-12-21 22:08:08.632 -05 000000036 INF: ===================Frame #1079=================== 15-12-21 22:08:08.695 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:08.723 -05 000000023 INF: ===================Frame #1086=================== 15-12-21 22:08:08.764 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:08.782 -05 000000036 INF: ===================Frame #1091=================== 15-12-21 22:08:08.932 -05 000000036 INF: ===================Frame #1103=================== 15-12-21 22:08:08.967 -05 000000023 INF: ===================Frame #1106=================== 15-12-21 22:08:08.990 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:09.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:09.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:09.014 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:09.082 -05 000000036 INF: ===================Frame #1115=================== 15-12-21 22:08:09.117 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:09.132 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:09.132 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:08:09.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:09.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:09.137 -05 000000023 INF: ===================Frame #1119=================== 15-12-21 22:08:09.232 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:08:09.232 -05 000000036 INF: ===================Frame #1127=================== 15-12-21 22:08:09.236 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:09.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:09.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:09.287 -05 000000023 INF: ===================Frame #1131=================== 15-12-21 22:08:09.318 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 22:08:09.318 -05 000000062 INF: Current Position of Pump is: 25728 15-12-21 22:08:09.318 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:08:09.382 -05 000000036 INF: ===================Frame #1138=================== 15-12-21 22:08:09.418 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:08:09.437 -05 000000023 INF: ===================Frame #1143=================== 15-12-21 22:08:09.506 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:09.526 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:09.570 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.969C:A1\r\n 15-12-21 22:08:09.570 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:09.587 -05 000000023 INF: ===================Frame #1155=================== 15-12-21 22:08:09.606 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:09.643 -05 000000036 INF: ===================Frame #1159=================== 15-12-21 22:08:09.694 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:09.737 -05 000000023 INF: ===================Frame #1167=================== 15-12-21 22:08:09.793 -05 000000036 INF: ===================Frame #1171=================== 15-12-21 22:08:09.887 -05 000000023 INF: ===================Frame #1178=================== 15-12-21 22:08:09.943 -05 000000036 INF: ===================Frame #1183=================== 15-12-21 22:08:09.944 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:10.006 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:10.006 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:10.006 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:08:10.006 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:10.070 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:08:10.070 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:10.093 -05 000000036 INF: ===================Frame #1195=================== 15-12-21 22:08:10.107 -05 000000023 INF: ===================Frame #1196=================== 15-12-21 22:08:10.173 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:08:10.195 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:08:10.195 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:10.243 -05 000000036 INF: ===================Frame #1207=================== 15-12-21 22:08:10.277 -05 000000023 INF: ===================Frame #1209=================== 15-12-21 22:08:10.295 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:10.323 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:08:10.323 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:10.393 -05 000000036 INF: ===================Frame #1218=================== 15-12-21 22:08:10.419 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:10.419 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:10.420 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:10.421 -05 000000062 INF: WaitCommand(5000) start 15-12-21 22:08:10.421 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 22:08:10.427 -05 000000023 INF: ===================Frame #1221=================== 15-12-21 22:08:10.545 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:10.569 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:10.569 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:10.577 -05 000000023 INF: ===================Frame #1233=================== 15-12-21 22:08:10.636 -05 000000036 INF: ===================Frame #1238=================== 15-12-21 22:08:10.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:10.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:10.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:10.727 -05 000000023 INF: ===================Frame #1245=================== 15-12-21 22:08:10.792 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:10.808 -05 000000036 INF: ===================Frame #1250=================== 15-12-21 22:08:10.815 -05 000000034 INF: FPGA: Recv TDIYWAIT 15-12-21 22:08:10.815 -05 000000041 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:08:10.817 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.992C:A1\r\n 15-12-21 22:08:10.817 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:10.822 -05 000000041 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:08:10.831 -05 000000028 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:08:10.831 -05 000000045 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:08:10.832 -05 000000036 INF: Camera complete - got 1250 frames. 15-12-21 22:08:10.832 -05 000000028 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:08:10.832 -05 000000028 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:08:10.832 -05 000000028 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:08:10.832 -05 000000028 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:08:10.833 -05 000000045 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:08:10.834 -05 000000045 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:08:10.834 -05 000000045 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:08:10.837 -05 000000045 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:08:10.837 -05 000000036 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:08:10.929 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:10.991 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:10.991 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:11.048 -05 000000033 INF: FPGA: Recv EX1MV 15-12-21 22:08:11.056 -05 000000045 INF: Excitation Filter 1: Moved 36 steps in 222.3666 ms 15-12-21 22:08:11.056 -05 000000045 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 222.5979 ms 15-12-21 22:08:11.065 -05 000000045 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 222.7994 ms 15-12-21 22:08:11.084 -05 000000045 INF: ====================================== 15-12-21 22:08:11.194 -05 000000045 INF: FPGA: Recv EX2MV 15-12-21 22:08:11.230 -05 000000028 INF: Excitation Filter 2: Moved 107 steps in 398.1419 ms 15-12-21 22:08:11.231 -05 000000028 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 398.4505 ms 15-12-21 22:08:11.231 -05 000000028 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 398.537 ms 15-12-21 22:08:11.232 -05 000000028 INF: ====================================== 15-12-21 22:08:11.234 -05 000000041 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:08:11.235 -05 000000041 INF: ====================================== 15-12-21 22:08:11.288 -05 000000055 INF: Y Motor: Moved to 9.0764 after 16630 ms 15-12-21 22:08:11.289 -05 000000055 INF: ====================================== 15-12-21 22:08:11.397 -05 000000023 INF: ===================Frame #1250=================== 15-12-21 22:08:11.397 -05 000000036 INF: ===================Camera TDI=================== 15-12-21 22:08:11.421 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:11.421 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:08:11.422 -05 000000036 INF: ====================================== 15-12-21 22:08:11.466 -05 000000023 INF: Camera complete - got 1250 frames. 15-12-21 22:08:11.468 -05 000000023 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:08:11.577 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 22:08:11.602 -05 000000023 INF: ====================================== 15-12-21 22:08:11.603 -05 000000064 INF: ===================Camera TDI=================== 15-12-21 22:08:11.605 -05 000000064 INF: ====================================== 15-12-21 22:08:11.610 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:11.611 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:11.612 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:11.614 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:08:11.642 -05 000000049 INF: FPGA: Recv TDICLINES 9462 15-12-21 22:08:11.643 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:08:11.704 -05 000000029 INF: FPGA: Recv TDIYERD 907646 15-12-21 22:08:11.704 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:08:11.769 -05 000000022 INF: FPGA: Recv ZADCR 24139 15-12-21 22:08:11.769 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.092. Y moved -60.304 mm 15-12-21 22:08:11.769 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:08:11.830 -05 000000041 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:08:11.830 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:08:11.830 -05 000000057 INF: TDIScan finished after 22103.4943 ms 15-12-21 22:08:11.831 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:08:11.831 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:08:11.837 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:11.863 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.187 um 15-12-21 22:08:11.864 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:11.866 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:11.869 -05 000000090 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:08:11.869 -05 000000064 INF: ===================Dither Clean Up Command=================== 15-12-21 22:08:11.869 -05 000000049 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:08:11.869 -05 000000090 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:08:11.873 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:08:11.873 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:08:11.873 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:08:11.873 -05 000000081 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:08:11.873 -05 000000036 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:11.877 -05 000000081 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:08:11.877 -05 000000036 INF: ===================LFT:Extracting coords=================== 15-12-21 22:08:11.892 -05 000000092 INF: FPGA: Recv ZSTEP 15-12-21 22:08:11.892 -05 000000055 INF: ====================================== 15-12-21 22:08:11.910 -05 000000036 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:11.911 -05 000000090 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:08:11.913 -05 000000090 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:08:11.913 -05 000000049 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:08:11.913 -05 000000036 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:08:11.913 -05 000000090 INF: ====================================== 15-12-21 22:08:11.916 -05 000000043 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:11.920 -05 000000043 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:11.921 -05 000000058 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:11.921 -05 000000009 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:11.921 -05 000000033 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:11.921 -05 000000058 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:11.921 -05 000000009 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:11.924 -05 000000033 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:11.957 -05 000000048 INF: FPGA: Recv ZSEL 15-12-21 22:08:11.957 -05 000000081 INF: FPGA: Xmit ZDACW 29127\n 15-12-21 22:08:11.972 -05 000000049 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:08:11.975 -05 000000049 INF: ====================================== 15-12-21 22:08:12.067 -05 000000025 INF: FPGA: Recv ZDACW 15-12-21 22:08:12.069 -05 000000081 INF: ====================================== 15-12-21 22:08:12.147 -05 000000058 INF: LFT found best fwhm score 2.427779 in 179 ms 15-12-21 22:08:12.147 -05 000000058 INF: LFT found good score at index 2613 with fwhm value 2.427779. Next cycle, cycle 40 starting Z position for bottom surface is at -0.092 mm FC:A, C:39,L:1,B 15-12-21 22:08:12.147 -05 000000058 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:12.148 -05 000000058 INF: ====================================== 15-12-21 22:08:12.161 -05 000000043 INF: LFT found best fwhm score 2.610579 in 191 ms 15-12-21 22:08:12.161 -05 000000043 INF: LFT found good score at index 4233 with fwhm value 2.610579. Next cycle, cycle 40 starting Z position for bottom surface is at -0.091 mm FC:A, C:39,L:1,B 15-12-21 22:08:12.161 -05 000000043 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:12.162 -05 000000043 INF: ====================================== 15-12-21 22:08:12.196 -05 000000009 INF: LFT found best fwhm score 2.539407 in 228 ms 15-12-21 22:08:12.196 -05 000000009 INF: LFT found good score at index 5333 with fwhm value 2.539407. Next cycle, cycle 40 starting Z position for bottom surface is at -0.091 mm FC:A, C:39,L:1,B 15-12-21 22:08:12.197 -05 000000009 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:12.197 -05 000000009 INF: ====================================== 15-12-21 22:08:12.203 -05 000000033 INF: LFT found best fwhm score 2.726455 in 234 ms 15-12-21 22:08:12.203 -05 000000033 INF: LFT found good score at index 1989 with fwhm value 2.726455. Next cycle, cycle 40 starting Z position for bottom surface is at -0.092 mm FC:A, C:39,L:1,B 15-12-21 22:08:12.204 -05 000000033 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:12.204 -05 000000033 INF: ====================================== 15-12-21 22:08:12.206 -05 000000036 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:12.207 -05 000000036 INF: LFT weighted average best Z for bottom surface is at -0.092mm FC:A, C:39,L:1,B 15-12-21 22:08:12.208 -05 000000036 INF: ====================================== 15-12-21 22:08:12.215 -05 000000064 INF: ====================================== 15-12-21 22:08:12.216 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:12.219 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:08:12.221 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:12.221 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:08:12.221 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:12.222 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:08:12.222 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:12.222 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:08:12.222 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:12.222 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:08:12.223 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:08:12.224 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:08:12.224 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:08:12.224 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left, Waiting for image analysis=================== 15-12-21 22:08:12.224 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:08:12.226 -05 000000057 INF: Waited 2 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 15-12-21 22:08:12.226 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:08:12.226 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:12.227 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:08:12.227 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:08:12.227 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:08:12.230 -05 000000020 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104=================== 15-12-21 22:08:12.230 -05 000000072 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104=================== 15-12-21 22:08:12.230 -05 000000044 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104=================== 15-12-21 22:08:12.230 -05 000000088 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105=================== 15-12-21 22:08:12.230 -05 000000031 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104=================== 15-12-21 22:08:12.231 -05 000000027 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106=================== 15-12-21 22:08:12.238 -05 000000051 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2107=================== 15-12-21 22:08:12.238 -05 000000040 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2107, Registering and Extracting C039 L001 T2108=================== 15-12-21 22:08:12.252 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:12.252 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:08:12.252 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:12.252 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -111.1 um, section = A_1 15-12-21 22:08:12.259 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:08:12.260 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:08:12.268 -05 000000074 INF: ===================MoveEmissionFilters=================== 15-12-21 22:08:12.270 -05 000000081 INF: ===================Move X,Y=================== 15-12-21 22:08:12.271 -05 000000022 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:08:12.272 -05 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:08:12.272 -05 000000048 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:08:12.274 -05 000000081 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:08:12.275 -05 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:08:12.275 -05 000000022 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:08:12.275 -05 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:08:12.277 -05 000000022 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:08:12.278 -05 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:08:12.278 -05 000000048 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:08:12.282 -05 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:08:12.282 -05 000000036 INF: ===================Move X Motor without settling=================== 15-12-21 22:08:12.285 -05 000000022 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:08:12.285 -05 000000036 INF: X Motor: Xmit PR VM\n 15-12-21 22:08:12.285 -05 000000049 INF: ===================Move Y Motor without settling=================== 15-12-21 22:08:12.285 -05 000000084 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:08:12.285 -05 000000049 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:08:12.285 -05 000000086 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:08:12.285 -05 000000023 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:08:12.298 -05 000000023 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:08:12.298 -05 000000086 INF: ====================================== 15-12-21 22:08:12.298 -05 000000054 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:08:12.298 -05 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:08:12.298 -05 000000084 INF: ====================================== 15-12-21 22:08:12.298 -05 000000029 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:08:12.298 -05 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:08:12.298 -05 000000023 INF: ====================================== 15-12-21 22:08:12.298 -05 000000054 INF: ====================================== 15-12-21 22:08:12.303 -05 000000029 INF: ====================================== 15-12-21 22:08:12.303 -05 000000022 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:08:12.303 -05 000000078 INF: ====================================== 15-12-21 22:08:12.303 -05 000000063 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:08:12.304 -05 000000024 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:08:12.308 -05 000000063 INF: ====================================== 15-12-21 22:08:12.308 -05 000000024 INF: ====================================== 15-12-21 22:08:12.308 -05 000000034 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:12.308 -05 000000082 INF: ===================Camera Arm TDI=================== 15-12-21 22:08:12.308 -05 000000048 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:08:12.313 -05 000000049 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:08:12.313 -05 000000034 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:12.313 -05 000000047 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:08:12.313 -05 000000056 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:08:12.314 -05 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:08:12.314 -05 000000048 INF: ====================================== 15-12-21 22:08:12.315 -05 000000034 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:08:12.315 -05 000000034 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:08:12.315 -05 000000034 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:08:12.315 -05 000000056 INF: ====================================== 15-12-21 22:08:12.316 -05 000000047 INF: ====================================== 15-12-21 22:08:12.317 -05 000000049 INF: Y Motor: Xmit 1G\n 15-12-21 22:08:12.317 -05 000000033 INF: ====================================== 15-12-21 22:08:12.323 -05 000000074 INF: ====================================== 15-12-21 22:08:12.329 -05 000000036 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:08:12.329 -05 000000036 INF: X Motor: Xmit PR VI\n 15-12-21 22:08:12.339 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:12.344 -05 000000049 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:08:12.347 -05 000000049 INF: Y Motor: Recv 1G\r\n 15-12-21 22:08:12.349 -05 000000049 INF: Y Motor: Xmit 1D\n 15-12-21 22:08:12.377 -05 000000043 INF: FPGA: Recv ZSEL 15-12-21 22:08:12.380 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:08:12.380 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:12.380 -05 000000034 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:08:12.380 -05 000000034 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:12.381 -05 000000036 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:08:12.381 -05 000000036 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:08:12.381 -05 000000036 INF: X Motor: Moving to 13.6440 mm @15.000 mm/sec, started at 12.8696 mm 15-12-21 22:08:12.381 -05 000000036 INF: X Motor: Xmit MA -18578\n 15-12-21 22:08:12.394 -05 000000034 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:08:12.394 -05 000000034 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:08:12.394 -05 000000034 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:08:12.418 -05 000000049 INF: Y Motor: Recv 1D\r\n 15-12-21 22:08:12.419 -05 000000049 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:08:12.420 -05 000000049 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:08:12.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:12.424 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 22:08:12.440 -05 000000092 INF: FPGA: Recv ZSTEP 15-12-21 22:08:12.441 -05 000000034 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:12.442 -05 000000036 INF: X Motor: Recv MA -18578\r\n> 15-12-21 22:08:12.442 -05 000000036 INF: X Motor: WaitUntilStopped 60052 15-12-21 22:08:12.448 -05 000000034 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:08:12.448 -05 000000034 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:12.457 -05 000000034 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:08:12.457 -05 000000034 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:08:12.457 -05 000000034 INF: Z Motor: Arming to move to -0.0711 mm 15-12-21 22:08:12.457 -05 000000034 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:08:12.487 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:12.514 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:12.514 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:12.515 -05 000000054 INF: FPGA: Recv ZYT 15-12-21 22:08:12.515 -05 000000034 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907644 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:08:12.515 -05 000000034 INF: FPGA: Xmit ZARM 18641\n 15-12-21 22:08:12.587 -05 000000037 INF: FPGA: Recv ZARM 15-12-21 22:08:12.588 -05 000000034 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 72.8074 ms 15-12-21 22:08:12.588 -05 000000034 INF: Z Motor: ArmAbsStepped took 130.3129 ms 15-12-21 22:08:12.589 -05 000000034 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:12.592 -05 000000034 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:12.622 -05 000000034 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:08:12.637 -05 000000034 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:12.663 -05 000000034 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:08:12.664 -05 000000034 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:12.666 -05 000000034 INF: ====================================== 15-12-21 22:08:12.731 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:12.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:12.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:12.894 -05 000000036 INF: X Motor: Xmit PR ER\n 15-12-21 22:08:12.988 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:12.993 -05 000000036 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:08:12.993 -05 000000036 INF: X Motor: Moved to 13.6436 after 551 ms 15-12-21 22:08:12.994 -05 000000036 INF: ====================================== 15-12-21 22:08:13.051 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:13.051 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:13.474 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:13.474 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 22:08:13.910 -05 000000082 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:08:13.910 -05 000000082 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:08:13.910 -05 000000082 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:08:14.410 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:14.468 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:14.468 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:14.475 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:14.475 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 22:08:14.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:14.622 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:14.622 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:14.816 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:14.842 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.793C:A1\r\n 15-12-21 22:08:14.842 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:14.941 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:14.984 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:14.984 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:15.422 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:15.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:15.423 -05 000000062 INF: WaitCommand(5000) end 15-12-21 22:08:15.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:15.425 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:15.446 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:15.451 -05 000000078 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:08:15.451 -05 000000056 INF: ===================WaitCommand=================== 15-12-21 22:08:15.452 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:15.452 -05 000000056 INF: WaitCommand(15000) start 15-12-21 22:08:15.452 -05 000000056 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:08:15.537 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:15.556 -05 000000082 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:08:15.557 -05 000000082 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:08:15.557 -05 000000082 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:08:15.559 -05 000000082 INF: ====================================== 15-12-21 22:08:15.564 -05 000000022 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:08:15.567 -05 000000022 INF: ====================================== 15-12-21 22:08:15.646 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:15.793 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:15.893 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:08:15.930 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:15.982 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 22:08:15.982 -05 000000078 INF: Current Position of Pump is: 25728 15-12-21 22:08:15.982 -05 000000078 INF: Dispense Steps 48000 is greater than steps to home syringe 25728, reducing number of steps to 25728 15-12-21 22:08:15.983 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.979C:A1\r\n 15-12-21 22:08:15.983 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:15.983 -05 000000078 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:08:16.046 -05 000000049 INF: Y Motor: Moved to 70.6886 after 3626 ms 15-12-21 22:08:16.047 -05 000000049 INF: ====================================== 15-12-21 22:08:16.050 -05 000000081 INF: ===================Move X,Y=================== 15-12-21 22:08:16.051 -05 000000081 INF: ====================================== 15-12-21 22:08:16.057 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:08:16.069 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:16.069 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:08:16.082 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD25728R\r 15-12-21 22:08:16.105 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:08:16.106 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:08:16.166 -05 000000064 INF: FPGA: Recv ZFREQCL 15-12-21 22:08:16.167 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:16.167 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:08:16.167 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:16.168 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:08:16.231 -05 000000063 INF: FPGA: Recv TDIYERD 7068851 15-12-21 22:08:16.231 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068851 counts (70.689 mm) 15-12-21 22:08:16.232 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:08:16.233 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:08:16.238 -05 000000041 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:08:16.238 -05 000000023 INF: ===================TDI FPGA Arm=================== 15-12-21 22:08:16.241 -05 000000041 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:08:16.245 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:08:16.247 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:08:16.247 -05 000000023 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:08:16.267 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:16.276 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:16.292 -05 000000045 INF: FPGA: Recv TDIYPOS 15-12-21 22:08:16.293 -05 000000041 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:08:16.293 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:08:16.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:16.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:16.294 -05 000000041 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:08:16.294 -05 000000041 INF: ====================================== 15-12-21 22:08:16.299 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:08:16.301 -05 000000023 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:08:16.355 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:16.395 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:16.422 -05 000000036 INF: FPGA: Recv TDIYARM3 15-12-21 22:08:16.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:16.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:16.423 -05 000000023 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:08:16.428 -05 000000023 INF: ===================TDI FPGA Arm=================== 15-12-21 22:08:16.431 -05 000000023 INF: ====================================== 15-12-21 22:08:16.432 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:08:16.439 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:16.439 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:16.440 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:16.449 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:16.452 -05 000000056 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:08:16.453 -05 000000074 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:08:16.453 -05 000000084 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:08:16.454 -05 000000074 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:08:16.454 -05 000000074 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:08:16.454 -05 000000074 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:08:16.454 -05 000000074 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:08:16.454 -05 000000084 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:08:16.454 -05 000000084 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:08:16.454 -05 000000084 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:08:16.462 -05 000000084 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:08:16.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:16.605 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:16.607 -05 000000058 INF: FPGA: Recv EX1MV 15-12-21 22:08:16.607 -05 000000074 INF: Excitation Filter 1: Moved -36 steps in 153.585 ms 15-12-21 22:08:16.607 -05 000000074 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 153.7148 ms 15-12-21 22:08:16.607 -05 000000074 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 153.8013 ms 15-12-21 22:08:16.609 -05 000000074 INF: ====================================== 15-12-21 22:08:16.609 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:16.609 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:16.670 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:16.826 -05 000000029 INF: FPGA: Recv EX2MV 15-12-21 22:08:16.826 -05 000000084 INF: Excitation Filter 2: Moved -107 steps in 372.2726 ms 15-12-21 22:08:16.826 -05 000000084 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 372.4194 ms 15-12-21 22:08:16.826 -05 000000084 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 372.5197 ms 15-12-21 22:08:16.828 -05 000000084 INF: ====================================== 15-12-21 22:08:16.831 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:16.834 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:16.836 -05 000000024 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:08:16.836 -05 000000055 INF: ===================FPGA Z Wait=================== 15-12-21 22:08:16.836 -05 000000092 INF: ===================Move Y Motor without settling=================== 15-12-21 22:08:16.836 -05 000000055 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:08:16.837 -05 000000092 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:08:16.837 -05 000000092 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:08:16.837 -05 000000079 INF: ===================Camera TDI=================== 15-12-21 22:08:16.837 -05 000000024 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:08:16.838 -05 000000024 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:08:16.838 -05 000000092 INF: Y Motor: Xmit 1G\n 15-12-21 22:08:16.840 -05 000000079 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:08:16.842 -05 000000058 INF: ===================Camera TDI=================== 15-12-21 22:08:16.843 -05 000000074 INF: ===================Camera TDI=================== 15-12-21 22:08:16.887 -05 000000092 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:08:16.888 -05 000000092 INF: Y Motor: Recv 1G\r\n 15-12-21 22:08:16.889 -05 000000092 INF: Y Motor: Xmit 1D\n 15-12-21 22:08:16.920 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:16.947 -05 000000092 INF: Y Motor: Recv 1D\r\n 15-12-21 22:08:16.948 -05 000000092 INF: Y Motor: Recv *407662\r\n 15-12-21 22:08:16.949 -05 000000092 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:08:17.016 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:17.149 -05 000000022 INF: FPGA: Recv ZWAIT 15-12-21 22:08:17.150 -05 000000055 INF: ====================================== 15-12-21 22:08:17.202 -05 000000088 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2107=================== 15-12-21 22:08:17.227 -05 000000077 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2107, Registering and Extracting C039 L001 T2109=================== 15-12-21 22:08:17.266 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:17.300 -05 000000058 INF: ===================Frame #1=================== 15-12-21 22:08:17.300 -05 000000074 INF: ===================Frame #1=================== 15-12-21 22:08:17.322 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:17.386 -05 000000072 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2107=================== 15-12-21 22:08:17.402 -05 000000031 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106=================== 15-12-21 22:08:17.426 -05 000000038 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110=================== 15-12-21 22:08:17.426 -05 000000066 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110, Registering and Extracting C039 L001 T2111=================== 15-12-21 22:08:17.460 -05 000000056 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:08:17.460 -05 000000074 INF: ===================Frame #14=================== 15-12-21 22:08:17.460 -05 000000058 INF: ===================Frame #14=================== 15-12-21 22:08:17.487 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:17.526 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 22:08:17.526 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:17.572 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:17.634 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:17.683 -05 000000058 INF: ===================Frame #31=================== 15-12-21 22:08:17.685 -05 000000074 INF: ===================Frame #31=================== 15-12-21 22:08:17.713 -05 000000027 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110=================== 15-12-21 22:08:17.726 -05 000000011 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110, Registering and Extracting C039 L001 T2112=================== 15-12-21 22:08:17.834 -05 000000058 INF: ===================Frame #43=================== 15-12-21 22:08:17.835 -05 000000074 INF: ===================Frame #43=================== 15-12-21 22:08:17.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:17.896 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:17.948 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:17.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:17.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:17.964 -05 000000020 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110=================== 15-12-21 22:08:17.985 -05 000000074 INF: ===================Frame #55=================== 15-12-21 22:08:17.986 -05 000000058 INF: ===================Frame #55=================== 15-12-21 22:08:18.051 -05 000000060 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110, Registering and Extracting C039 L001 T2113=================== 15-12-21 22:08:18.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:18.135 -05 000000044 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110=================== 15-12-21 22:08:18.137 -05 000000058 INF: ===================Frame #67=================== 15-12-21 22:08:18.137 -05 000000074 INF: ===================Frame #67=================== 15-12-21 22:08:18.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:18.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:18.198 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:18.259 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:18.259 -05 000000089 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110, Registering and Extracting C039 L001 T2114=================== 15-12-21 22:08:18.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:18.288 -05 000000074 INF: ===================Frame #79=================== 15-12-21 22:08:18.288 -05 000000058 INF: ===================Frame #79=================== 15-12-21 22:08:18.298 -05 000000040 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2110=================== 15-12-21 22:08:18.339 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:18.339 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:18.341 -05 000000051 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106=================== 15-12-21 22:08:18.358 -05 000000075 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2115=================== 15-12-21 22:08:18.358 -05 000000076 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2115, Registering and Extracting C039 L001 T2116=================== 15-12-21 22:08:18.451 -05 000000074 INF: ===================Frame #91=================== 15-12-21 22:08:18.451 -05 000000058 INF: ===================Frame #91=================== 15-12-21 22:08:18.460 -05 000000056 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:08:18.509 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:18.555 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:18.603 -05 000000074 INF: ===================Frame #104=================== 15-12-21 22:08:18.603 -05 000000058 INF: ===================Frame #104=================== 15-12-21 22:08:18.805 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:18.885 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:19.135 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:19.228 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:19.460 -05 000000056 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:08:19.478 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:19.594 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:19.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:19.701 -05 000000074 INF: ===================Frame #191=================== 15-12-21 22:08:19.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:19.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:19.799 -05 000000058 INF: ===================Frame #198=================== 15-12-21 22:08:19.835 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:19.844 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:19.850 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:19.850 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:19.851 -05 000000074 INF: ===================Frame #203=================== 15-12-21 22:08:19.955 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:19.956 -05 000000078 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:08:19.957 -05 000000078 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:08:19.999 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:20.001 -05 000000074 INF: ===================Frame #215=================== 15-12-21 22:08:20.100 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:08:20.104 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.924C:A1\r\n 15-12-21 22:08:20.104 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:20.161 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:20.161 -05 000000074 INF: ===================Frame #227=================== 15-12-21 22:08:20.221 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:20.262 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:20.289 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:20.289 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:20.358 -05 000000074 INF: ===================Frame #243=================== 15-12-21 22:08:20.373 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:20.461 -05 000000056 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:08:20.509 -05 000000074 INF: ===================Frame #255=================== 15-12-21 22:08:20.623 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:20.665 -05 000000074 INF: ===================Frame #267=================== 15-12-21 22:08:20.676 -05 000000078 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:20.677 -05 000000078 INF: ====================================== 15-12-21 22:08:20.816 -05 000000074 INF: ===================Frame #279=================== 15-12-21 22:08:20.967 -05 000000074 INF: ===================Frame #291=================== 15-12-21 22:08:21.090 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:21.118 -05 000000074 INF: ===================Frame #303=================== 15-12-21 22:08:21.137 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.000C:A1\r\n 15-12-21 22:08:21.137 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:21.137 -05 000000058 INF: ===================Frame #304=================== 15-12-21 22:08:21.268 -05 000000074 INF: ===================Frame #315=================== 15-12-21 22:08:21.420 -05 000000074 INF: ===================Frame #327=================== 15-12-21 22:08:21.461 -05 000000056 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:08:21.566 -05 000000058 INF: ===================Frame #338=================== 15-12-21 22:08:21.570 -05 000000074 INF: ===================Frame #339=================== 15-12-21 22:08:21.603 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:21.628 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:21.628 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:21.721 -05 000000074 INF: ===================Frame #350=================== 15-12-21 22:08:21.731 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:21.758 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:21.758 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:21.831 -05 000000058 INF: ===================Frame #359=================== 15-12-21 22:08:21.860 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:21.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:21.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:21.981 -05 000000058 INF: ===================Frame #371=================== 15-12-21 22:08:22.066 -05 000000077 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106, Registering and Extracting C039 L001 T2115=================== 15-12-21 22:08:22.133 -05 000000058 INF: ===================Frame #383=================== 15-12-21 22:08:22.283 -05 000000058 INF: ===================Frame #395=================== 15-12-21 22:08:22.331 -05 000000066 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105, Registering and Extracting C039 L001 T2106=================== 15-12-21 22:08:22.435 -05 000000058 INF: ===================Frame #407=================== 15-12-21 22:08:22.463 -05 000000056 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:08:22.524 -05 000000074 INF: ===================Frame #414=================== 15-12-21 22:08:22.586 -05 000000058 INF: ===================Frame #419=================== 15-12-21 22:08:22.633 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:22.691 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 22:08:22.691 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:22.736 -05 000000058 INF: ===================Frame #431=================== 15-12-21 22:08:22.853 -05 000000074 INF: ===================Frame #440=================== 15-12-21 22:08:22.886 -05 000000058 INF: ===================Frame #443=================== 15-12-21 22:08:22.933 -05 000000038 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104, Registering and Extracting C039 L001 T2105=================== 15-12-21 22:08:23.036 -05 000000058 INF: ===================Frame #454=================== 15-12-21 22:08:23.075 -05 000000074 INF: ===================Frame #457=================== 15-12-21 22:08:23.110 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:23.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:23.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:23.148 -05 000000011 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103, Registering and Extracting C039 L001 T2104=================== 15-12-21 22:08:23.226 -05 000000074 INF: ===================Frame #469=================== 15-12-21 22:08:23.247 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:23.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:23.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:23.377 -05 000000074 INF: ===================Frame #481=================== 15-12-21 22:08:23.416 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:23.439 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:23.439 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:23.463 -05 000000056 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:08:23.484 -05 000000058 INF: ===================Frame #490=================== 15-12-21 22:08:23.528 -05 000000074 INF: ===================Frame #493=================== 15-12-21 22:08:23.679 -05 000000074 INF: ===================Frame #505=================== 15-12-21 22:08:23.687 -05 000000060 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102, Registering and Extracting C039 L001 T2103=================== 15-12-21 22:08:23.704 -05 000000058 INF: ===================Frame #507=================== 15-12-21 22:08:23.830 -05 000000074 INF: ===================Frame #517=================== 15-12-21 22:08:23.855 -05 000000058 INF: ===================Frame #519=================== 15-12-21 22:08:23.981 -05 000000074 INF: ===================Frame #529=================== 15-12-21 22:08:24.005 -05 000000058 INF: ===================Frame #531=================== 15-12-21 22:08:24.015 -05 000000075 INF: ===================Registering and Extracting C039 L001 T2101, Registering and Extracting C039 L001 T2102=================== 15-12-21 22:08:24.049 -05 000000076 INF: ===================Registering and Extracting C039 L001 T2101=================== 15-12-21 22:08:24.108 -05 000000089 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:08:24.131 -05 000000074 INF: ===================Frame #541=================== 15-12-21 22:08:24.157 -05 000000058 INF: ===================Frame #543=================== 15-12-21 22:08:24.204 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:24.209 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:08:24.282 -05 000000074 INF: ===================Frame #553=================== 15-12-21 22:08:24.307 -05 000000058 INF: ===================Frame #555=================== 15-12-21 22:08:24.341 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:24.346 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:08:24.432 -05 000000074 INF: ===================Frame #565=================== 15-12-21 22:08:24.451 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:24.456 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:08:24.457 -05 000000058 INF: ===================Frame #567=================== 15-12-21 22:08:24.463 -05 000000056 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:08:24.543 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:24.551 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:08:24.582 -05 000000074 INF: ===================Frame #577=================== 15-12-21 22:08:24.607 -05 000000058 INF: ===================Frame #579=================== 15-12-21 22:08:24.659 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:24.664 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:24.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:24.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:24.733 -05 000000074 INF: ===================Frame #589=================== 15-12-21 22:08:24.757 -05 000000058 INF: ===================Frame #590=================== 15-12-21 22:08:24.796 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:24.812 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:24.812 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:24.886 -05 000000074 INF: ===================Frame #600=================== 15-12-21 22:08:24.919 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:24.936 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:24.936 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:25.122 -05 000000058 INF: ===================Frame #619=================== 15-12-21 22:08:25.222 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:25.248 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.019C:A1\r\n 15-12-21 22:08:25.248 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:25.273 -05 000000058 INF: ===================Frame #631=================== 15-12-21 22:08:25.401 -05 000000074 INF: ===================Frame #641=================== 15-12-21 22:08:25.423 -05 000000058 INF: ===================Frame #643=================== 15-12-21 22:08:25.463 -05 000000056 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:08:25.551 -05 000000074 INF: ===================Frame #653=================== 15-12-21 22:08:25.573 -05 000000058 INF: ===================Frame #655=================== 15-12-21 22:08:25.639 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:08:25.701 -05 000000074 INF: ===================Frame #665=================== 15-12-21 22:08:25.723 -05 000000058 INF: ===================Frame #667=================== 15-12-21 22:08:25.851 -05 000000074 INF: ===================Frame #677=================== 15-12-21 22:08:25.873 -05 000000058 INF: ===================Frame #679=================== 15-12-21 22:08:26.001 -05 000000074 INF: ===================Frame #689=================== 15-12-21 22:08:26.023 -05 000000058 INF: ===================Frame #691=================== 15-12-21 22:08:26.151 -05 000000074 INF: ===================Frame #701=================== 15-12-21 22:08:26.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:26.173 -05 000000058 INF: ===================Frame #702=================== 15-12-21 22:08:26.190 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:26.190 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:26.291 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:26.301 -05 000000074 INF: ===================Frame #713=================== 15-12-21 22:08:26.311 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.009C:A1\r\n 15-12-21 22:08:26.311 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:26.415 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:26.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:26.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:26.451 -05 000000074 INF: ===================Frame #724=================== 15-12-21 22:08:26.463 -05 000000056 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:08:26.489 -05 000000058 INF: ===================Frame #727=================== 15-12-21 22:08:26.536 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:26.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:26.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:26.639 -05 000000058 INF: ===================Frame #739=================== 15-12-21 22:08:26.747 -05 000000074 INF: ===================Frame #748=================== 15-12-21 22:08:26.789 -05 000000058 INF: ===================Frame #751=================== 15-12-21 22:08:26.939 -05 000000058 INF: ===================Frame #763=================== 15-12-21 22:08:26.949 -05 000000074 INF: ===================Frame #764=================== 15-12-21 22:08:27.089 -05 000000058 INF: ===================Frame #775=================== 15-12-21 22:08:27.120 -05 000000074 INF: ===================Frame #777=================== 15-12-21 22:08:27.239 -05 000000058 INF: ===================Frame #787=================== 15-12-21 22:08:27.270 -05 000000074 INF: ===================Frame #789=================== 15-12-21 22:08:27.389 -05 000000058 INF: ===================Frame #799=================== 15-12-21 22:08:27.420 -05 000000074 INF: ===================Frame #801=================== 15-12-21 22:08:27.464 -05 000000056 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:08:27.539 -05 000000058 INF: ===================Frame #810=================== 15-12-21 22:08:27.570 -05 000000074 INF: ===================Frame #813=================== 15-12-21 22:08:27.720 -05 000000074 INF: ===================Frame #825=================== 15-12-21 22:08:27.790 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:27.841 -05 000000058 INF: ===================Frame #834=================== 15-12-21 22:08:27.870 -05 000000074 INF: ===================Frame #837=================== 15-12-21 22:08:27.871 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:27.871 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:27.979 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:27.995 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 22:08:27.995 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:28.020 -05 000000074 INF: ===================Frame #848=================== 15-12-21 22:08:28.024 -05 000000058 INF: ===================Frame #849=================== 15-12-21 22:08:28.100 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:28.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:28.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:28.174 -05 000000058 INF: ===================Frame #861=================== 15-12-21 22:08:28.231 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:28.244 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:28.244 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:28.316 -05 000000074 INF: ===================Frame #872=================== 15-12-21 22:08:28.324 -05 000000058 INF: ===================Frame #872=================== 15-12-21 22:08:28.464 -05 000000056 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:08:28.525 -05 000000074 INF: ===================Frame #888=================== 15-12-21 22:08:28.552 -05 000000058 INF: ===================Frame #890=================== 15-12-21 22:08:28.699 -05 000000074 INF: ===================Frame #902=================== 15-12-21 22:08:28.727 -05 000000058 INF: ===================Frame #904=================== 15-12-21 22:08:28.870 -05 000000074 INF: ===================Frame #916=================== 15-12-21 22:08:28.896 -05 000000058 INF: ===================Frame #918=================== 15-12-21 22:08:29.038 -05 000000074 INF: ===================Frame #929=================== 15-12-21 22:08:29.069 -05 000000058 INF: ===================Frame #931=================== 15-12-21 22:08:29.189 -05 000000074 INF: ===================Frame #941=================== 15-12-21 22:08:29.219 -05 000000058 INF: ===================Frame #943=================== 15-12-21 22:08:29.342 -05 000000074 INF: ===================Frame #953=================== 15-12-21 22:08:29.369 -05 000000058 INF: ===================Frame #955=================== 15-12-21 22:08:29.464 -05 000000056 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:08:29.474 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:29.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:29.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:29.492 -05 000000074 INF: ===================Frame #965=================== 15-12-21 22:08:29.519 -05 000000058 INF: ===================Frame #967=================== 15-12-21 22:08:29.598 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:29.616 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:29.616 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:29.642 -05 000000074 INF: ===================Frame #977=================== 15-12-21 22:08:29.669 -05 000000058 INF: ===================Frame #979=================== 15-12-21 22:08:29.726 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:29.792 -05 000000074 INF: ===================Frame #989=================== 15-12-21 22:08:29.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:29.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:29.819 -05 000000058 INF: ===================Frame #991=================== 15-12-21 22:08:29.943 -05 000000074 INF: ===================Frame #1000=================== 15-12-21 22:08:29.969 -05 000000058 INF: ===================Frame #1003=================== 15-12-21 22:08:30.119 -05 000000058 INF: ===================Frame #1014=================== 15-12-21 22:08:30.228 -05 000000074 INF: ===================Frame #1023=================== 15-12-21 22:08:30.351 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:30.380 -05 000000074 INF: ===================Frame #1035=================== 15-12-21 22:08:30.407 -05 000000058 INF: ===================Frame #1037=================== 15-12-21 22:08:30.429 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.003C:A1\r\n 15-12-21 22:08:30.429 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:30.453 -05 000000056 INF: ===================WaitCommand=================== 15-12-21 22:08:30.453 -05 000000056 INF: WaitCommand(15000) end 15-12-21 22:08:30.453 -05 000000056 INF: ====================================== 15-12-21 22:08:30.454 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:30.455 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:30.456 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:30.456 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:30.530 -05 000000074 INF: ===================Frame #1047=================== 15-12-21 22:08:30.552 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:30.552 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 22:08:30.552 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:30.552 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:08:30.552 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:30.557 -05 000000058 INF: ===================Frame #1049=================== 15-12-21 22:08:30.615 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:08:30.615 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:30.681 -05 000000074 INF: ===================Frame #1059=================== 15-12-21 22:08:30.707 -05 000000058 INF: ===================Frame #1061=================== 15-12-21 22:08:30.724 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:08:30.740 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:08:30.740 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:30.832 -05 000000074 INF: ===================Frame #1071=================== 15-12-21 22:08:30.850 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:30.857 -05 000000058 INF: ===================Frame #1073=================== 15-12-21 22:08:30.866 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:08:30.866 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:30.967 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:30.967 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:08:30.967 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:30.982 -05 000000074 INF: ===================Frame #1083=================== 15-12-21 22:08:31.007 -05 000000058 INF: ===================Frame #1085=================== 15-12-21 22:08:31.051 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:31.059 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 120, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:08:31.093 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:31.114 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:31.114 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:31.133 -05 000000074 INF: ===================Frame #1094=================== 15-12-21 22:08:31.151 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:08:31.158 -05 000000058 INF: ===================Frame #1097=================== 15-12-21 22:08:31.220 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:31.237 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:08:31.237 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 22:08:31.238 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:31.238 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:31.238 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:08:31.308 -05 000000058 INF: ===================Frame #1108=================== 15-12-21 22:08:31.337 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P23040R\r 15-12-21 22:08:31.344 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:31.365 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:31.365 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:31.426 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:31.433 -05 000000074 INF: ===================Frame #1118=================== 15-12-21 22:08:31.468 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:31.490 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.983C:A1\r\n 15-12-21 22:08:31.490 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:31.526 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:31.601 -05 000000058 INF: ===================Frame #1132=================== 15-12-21 22:08:31.614 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:31.623 -05 000000074 INF: ===================Frame #1133=================== 15-12-21 22:08:31.825 -05 000000058 INF: ===================Frame #1146=================== 15-12-21 22:08:31.865 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:31.926 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:31.976 -05 000000074 INF: ===================Frame #1161=================== 15-12-21 22:08:31.993 -05 000000058 INF: ===================Frame #1162=================== 15-12-21 22:08:32.126 -05 000000074 INF: ===================Frame #1173=================== 15-12-21 22:08:32.163 -05 000000058 INF: ===================Frame #1176=================== 15-12-21 22:08:32.176 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:32.237 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:32.277 -05 000000074 INF: ===================Frame #1185=================== 15-12-21 22:08:32.331 -05 000000058 INF: ===================Frame #1189=================== 15-12-21 22:08:32.428 -05 000000074 INF: ===================Frame #1197=================== 15-12-21 22:08:32.481 -05 000000058 INF: ===================Frame #1201=================== 15-12-21 22:08:32.487 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:32.550 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:32.579 -05 000000074 INF: ===================Frame #1209=================== 15-12-21 22:08:32.593 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:32.613 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:32.613 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:32.632 -05 000000058 INF: ===================Frame #1213=================== 15-12-21 22:08:32.723 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:32.729 -05 000000074 INF: ===================Frame #1221=================== 15-12-21 22:08:32.737 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:32.737 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:32.783 -05 000000058 INF: ===================Frame #1225=================== 15-12-21 22:08:32.800 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:32.841 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:32.863 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:32.864 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:32.864 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:32.881 -05 000000074 INF: ===================Frame #1233=================== 15-12-21 22:08:32.933 -05 000000058 INF: ===================Frame #1237=================== 15-12-21 22:08:33.031 -05 000000074 INF: ===================Frame #1245=================== 15-12-21 22:08:33.083 -05 000000058 INF: ===================Frame #1249=================== 15-12-21 22:08:33.101 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:33.110 -05 000000068 INF: FPGA: Recv TDIYWAIT 15-12-21 22:08:33.110 -05 000000024 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:08:33.114 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:33.115 -05 000000024 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:08:33.116 -05 000000063 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:08:33.117 -05 000000063 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:08:33.117 -05 000000063 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:08:33.119 -05 000000063 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:08:33.119 -05 000000063 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:08:33.119 -05 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:08:33.119 -05 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:08:33.119 -05 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:08:33.119 -05 000000078 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:08:33.120 -05 000000078 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:08:33.174 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:33.175 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:08:33.175 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:33.181 -05 000000074 INF: ===================Frame #1250=================== 15-12-21 22:08:33.233 -05 000000058 INF: ===================Frame #1250=================== 15-12-21 22:08:33.297 -05 000000022 INF: FPGA: Recv EX1MV 15-12-21 22:08:33.297 -05 000000063 INF: Excitation Filter 1: Moved 36 steps in 178.0383 ms 15-12-21 22:08:33.297 -05 000000063 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 180.194 ms 15-12-21 22:08:33.297 -05 000000063 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 180.2743 ms 15-12-21 22:08:33.298 -05 000000063 INF: ====================================== 15-12-21 22:08:33.362 -05 000000058 INF: Camera complete - got 1250 frames. 15-12-21 22:08:33.363 -05 000000074 INF: Camera complete - got 1250 frames. 15-12-21 22:08:33.364 -05 000000058 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:08:33.364 -05 000000074 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:08:33.424 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:33.485 -05 000000009 INF: FPGA: Recv EX2MV 15-12-21 22:08:33.486 -05 000000078 INF: Excitation Filter 2: Moved 107 steps in 366.324 ms 15-12-21 22:08:33.486 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:33.486 -05 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 366.4106 ms 15-12-21 22:08:33.486 -05 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 366.5326 ms 15-12-21 22:08:33.486 -05 000000078 INF: ====================================== 15-12-21 22:08:33.488 -05 000000024 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:08:33.489 -05 000000024 INF: ====================================== 15-12-21 22:08:33.693 -05 000000058 INF: ===================Camera TDI=================== 15-12-21 22:08:33.713 -05 000000058 INF: ====================================== 15-12-21 22:08:33.736 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:33.798 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:33.799 -05 000000074 INF: ===================Camera TDI=================== 15-12-21 22:08:33.821 -05 000000074 INF: ====================================== 15-12-21 22:08:33.826 -05 000000079 INF: ===================Camera TDI=================== 15-12-21 22:08:33.828 -05 000000079 INF: ====================================== 15-12-21 22:08:33.985 -05 000000092 INF: Y Motor: Moved to 9.0765 after 17035 ms 15-12-21 22:08:33.985 -05 000000092 INF: ====================================== 15-12-21 22:08:33.987 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:33.988 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:33.993 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:33.993 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:08:34.100 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:34.100 -05 000000063 INF: FPGA: Recv TDICLINES 9462 15-12-21 22:08:34.100 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:08:34.182 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:34.189 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:34.190 -05 000000092 INF: FPGA: Recv TDIYERD 907647 15-12-21 22:08:34.198 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:08:34.275 -05 000000028 INF: FPGA: Recv ZADCR 24104 15-12-21 22:08:34.293 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.092. Y moved -60.304 mm 15-12-21 22:08:34.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:34.403 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:08:34.403 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:34.432 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:34.465 -05 000000074 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:08:34.465 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:08:34.491 -05 000000057 INF: TDIScan finished after 22262.9408 ms 15-12-21 22:08:34.500 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:08:34.500 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:08:34.518 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:34.579 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:34.611 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.187 um 15-12-21 22:08:34.612 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:34.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:34.799 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:34.801 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:34.805 -05 000000049 INF: ===================Dither Clean Up Command=================== 15-12-21 22:08:34.805 -05 000000022 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:08:34.805 -05 000000009 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:08:34.805 -05 000000087 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:08:34.805 -05 000000009 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:08:34.806 -05 000000087 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:08:34.806 -05 000000087 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:08:34.806 -05 000000037 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:08:34.808 -05 000000037 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:08:34.808 -05 000000086 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:34.809 -05 000000086 INF: ===================LFT:Extracting coords=================== 15-12-21 22:08:34.827 -05 000000079 INF: FPGA: Recv ZSTEP 15-12-21 22:08:34.827 -05 000000079 INF: FPGA: Recv ZSEL 15-12-21 22:08:34.827 -05 000000037 INF: FPGA: Xmit ZDACW 29127\n 15-12-21 22:08:34.828 -05 000000087 INF: ====================================== 15-12-21 22:08:34.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:34.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:34.830 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:34.863 -05 000000086 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:34.865 -05 000000086 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:08:34.866 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:34.866 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:34.866 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:34.866 -05 000000028 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:34.867 -05 000000009 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:08:34.867 -05 000000029 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:34.867 -05 000000082 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:34.868 -05 000000022 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:08:34.868 -05 000000009 INF: ====================================== 15-12-21 22:08:34.868 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:34.869 -05 000000041 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:34.889 -05 000000064 INF: FPGA: Recv ZDACW 15-12-21 22:08:34.889 -05 000000037 INF: ====================================== 15-12-21 22:08:34.969 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:34.970 -05 000000022 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:08:34.971 -05 000000022 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:08:34.973 -05 000000022 INF: ====================================== 15-12-21 22:08:35.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:35.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:35.071 -05 000000041 INF: LFT found best fwhm score 2.64862 in 159 ms 15-12-21 22:08:35.071 -05 000000029 INF: LFT found best fwhm score 2.766505 in 160 ms 15-12-21 22:08:35.071 -05 000000029 INF: LFT found good score at index 5581 with fwhm value 2.766505. Next cycle, cycle 40 starting Z position for bottom surface is at -0.092 mm FC:A, C:39,L:1,B 15-12-21 22:08:35.071 -05 000000041 INF: LFT found good score at index 5221 with fwhm value 2.64862. Next cycle, cycle 40 starting Z position for bottom surface is at -0.092 mm FC:A, C:39,L:1,B 15-12-21 22:08:35.071 -05 000000041 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:35.072 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:35.072 -05 000000041 INF: ====================================== 15-12-21 22:08:35.072 -05 000000029 INF: ====================================== 15-12-21 22:08:35.076 -05 000000028 INF: LFT found best fwhm score 2.599284 in 167 ms 15-12-21 22:08:35.076 -05 000000028 INF: LFT found good score at index 4001 with fwhm value 2.599284. Next cycle, cycle 40 starting Z position for bottom surface is at -0.092 mm FC:A, C:39,L:1,B 15-12-21 22:08:35.077 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:35.077 -05 000000028 INF: ====================================== 15-12-21 22:08:35.080 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:35.087 -05 000000082 INF: LFT found best fwhm score 2.502023 in 176 ms 15-12-21 22:08:35.087 -05 000000082 INF: LFT found good score at index 3957 with fwhm value 2.502023. Next cycle, cycle 40 starting Z position for bottom surface is at -0.092 mm FC:A, C:39,L:1,B 15-12-21 22:08:35.087 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:35.094 -05 000000082 INF: ====================================== 15-12-21 22:08:35.098 -05 000000086 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:35.101 -05 000000086 INF: LFT weighted average best Z for bottom surface is at -0.092mm FC:A, C:39,L:1,B 15-12-21 22:08:35.101 -05 000000086 INF: ====================================== 15-12-21 22:08:35.104 -05 000000049 INF: ====================================== 15-12-21 22:08:35.106 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:35.108 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:08:35.108 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:35.108 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:08:35.108 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:35.108 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:08:35.109 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:35.109 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:08:35.109 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:35.110 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:08:35.110 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:08:35.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:08:35.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:08:35.112 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 22:08:35.112 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:08:35.113 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:08:35.113 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:08:35.113 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:35.114 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:08:35.114 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:08:35.115 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:08:35.116 -05 000000076 INF: ===================Registering and Extracting C039 L001 T2201=================== 15-12-21 22:08:35.116 -05 000000075 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202=================== 15-12-21 22:08:35.116 -05 000000089 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203=================== 15-12-21 22:08:35.116 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface=================== 15-12-21 22:08:35.116 -05 000000060 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204=================== 15-12-21 22:08:35.117 -05 000000011 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205=================== 15-12-21 22:08:35.117 -05 000000066 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206=================== 15-12-21 22:08:35.127 -05 000000077 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2207, Registering and Extracting C039 L001 T2208=================== 15-12-21 22:08:35.128 -05 000000038 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2207, Registering and Extracting C039 L001 T2208=================== 15-12-21 22:08:35.158 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:35.165 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:08:35.165 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:08:35.166 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:08:35.173 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:08:35.174 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:08:35.174 -05 000000057 INF: Compensator: Remaining OutOfPath 15-12-21 22:08:35.175 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:08:35.176 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:08:35.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:08:35.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:08:35.266 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:35.267 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:08:35.267 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:35.267 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -111.1 um, section = B_1 15-12-21 22:08:35.271 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:08:35.272 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:08:35.273 -05 000000043 INF: ===================Move X,Y=================== 15-12-21 22:08:35.273 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:08:35.275 -05 000000043 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:08:35.275 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:08:35.275 -05 000000036 INF: ===================MoveEmissionFilters=================== 15-12-21 22:08:35.275 -05 000000029 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:08:35.275 -05 000000029 INF: Z Motor: Moving to -0.1078 mm, started at -0.1111 mm 15-12-21 22:08:35.275 -05 000000029 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:08:35.276 -05 000000084 INF: ===================Move X Motor without settling=================== 15-12-21 22:08:35.276 -05 000000084 INF: X Motor: Xmit PR VM\n 15-12-21 22:08:35.277 -05 000000022 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:08:35.277 -05 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:08:35.277 -05 000000074 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:08:35.277 -05 000000079 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:08:35.278 -05 000000034 INF: ===================Move Y Motor without settling=================== 15-12-21 22:08:35.278 -05 000000034 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:08:35.278 -05 000000079 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:08:35.279 -05 000000034 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:08:35.279 -05 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:08:35.279 -05 000000034 INF: Y Motor: Xmit 1G\n 15-12-21 22:08:35.281 -05 000000022 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:08:35.281 -05 000000024 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:08:35.281 -05 000000047 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:08:35.281 -05 000000074 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:08:35.281 -05 000000086 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:08:35.282 -05 000000086 INF: ====================================== 15-12-21 22:08:35.282 -05 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:08:35.282 -05 000000078 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:08:35.283 -05 000000082 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:08:35.284 -05 000000024 INF: ====================================== 15-12-21 22:08:35.290 -05 000000047 INF: ====================================== 15-12-21 22:08:35.290 -05 000000078 INF: ====================================== 15-12-21 22:08:35.291 -05 000000086 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:08:35.292 -05 000000028 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:08:35.292 -05 000000082 INF: ====================================== 15-12-21 22:08:35.294 -05 000000028 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:08:35.294 -05 000000090 INF: ====================================== 15-12-21 22:08:35.294 -05 000000022 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:08:35.295 -05 000000028 INF: ====================================== 15-12-21 22:08:35.296 -05 000000079 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:08:35.296 -05 000000064 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:08:35.296 -05 000000086 INF: ====================================== 15-12-21 22:08:35.297 -05 000000022 INF: ====================================== 15-12-21 22:08:35.297 -05 000000079 INF: ====================================== 15-12-21 22:08:35.298 -05 000000064 INF: ====================================== 15-12-21 22:08:35.299 -05 000000074 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:08:35.307 -05 000000074 INF: ====================================== 15-12-21 22:08:35.468 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:35.472 -05 000000037 INF: FPGA: Recv ZTRG 15-12-21 22:08:35.472 -05 000000029 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:08:35.473 -05 000000034 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:08:35.474 -05 000000084 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:08:35.474 -05 000000084 INF: X Motor: Xmit PR VI\n 15-12-21 22:08:35.474 -05 000000034 INF: Y Motor: Recv 1G\r\n 15-12-21 22:08:35.474 -05 000000036 INF: ====================================== 15-12-21 22:08:35.475 -05 000000034 INF: Y Motor: Xmit 1D\n 15-12-21 22:08:35.534 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:35.536 -05 000000049 INF: FPGA: Recv ZYT 15-12-21 22:08:35.539 -05 000000029 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:08:35.539 -05 000000029 INF: FPGA: Xmit ZMV 28255\n 15-12-21 22:08:35.553 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:35.554 -05 000000084 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:08:35.554 -05 000000084 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:08:35.554 -05 000000084 INF: X Motor: Moving to 17.1670 mm @15.000 mm/sec, started at 13.6436 mm 15-12-21 22:08:35.554 -05 000000084 INF: X Motor: Xmit MA -17135\n 15-12-21 22:08:35.555 -05 000000034 INF: Y Motor: Recv 1D\r\n 15-12-21 22:08:35.556 -05 000000034 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:08:35.559 -05 000000034 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:08:35.620 -05 000000024 INF: FPGA: Recv ZMV 15-12-21 22:08:35.620 -05 000000029 INF: Z Motor: MoveAndTrigger 'ZMV' command took 81.009 ms 15-12-21 22:08:35.620 -05 000000029 INF: FPGA: Xmit ZDACR\n 15-12-21 22:08:35.636 -05 000000084 INF: X Motor: Recv MA -17135\r\n> 15-12-21 22:08:35.660 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.858C:A1\r\n 15-12-21 22:08:35.660 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:35.660 -05 000000084 INF: X Motor: WaitUntilStopped 60235 15-12-21 22:08:35.738 -05 000000065 INF: FPGA: Recv ZDACR 28255 15-12-21 22:08:35.744 -05 000000029 INF: Z Motor: MoveAndTrigger took 468.9993 ms w/comms 15-12-21 22:08:35.744 -05 000000029 INF: Z Motor: After move to -0.1078, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:08:35.744 -05 000000029 INF: Z Motor: MoveAbsStepped took 469.0844 ms 15-12-21 22:08:35.747 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:08:35.813 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:35.830 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:08:35.865 -05 000000048 INF: ===================Camera Arm TDI=================== 15-12-21 22:08:35.865 -05 000000047 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:35.879 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:35.879 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:35.886 -05 000000047 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:08:35.901 -05 000000047 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:08:35.902 -05 000000047 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:08:35.946 -05 000000079 INF: FPGA: Recv ZSEL 15-12-21 22:08:35.950 -05 000000047 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:08:35.954 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:35.993 -05 000000047 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:08:35.996 -05 000000047 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:08:35.997 -05 000000047 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:08:36.058 -05 000000058 INF: FPGA: Recv ZSTEP 15-12-21 22:08:36.064 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:36.146 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:36.154 -05 000000047 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:08:36.154 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:36.157 -05 000000047 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:08:36.157 -05 000000047 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:08:36.158 -05 000000047 INF: Z Motor: Arming to move to -0.0678 mm 15-12-21 22:08:36.158 -05 000000047 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:08:36.213 -05 000000033 INF: FPGA: Recv ZYT 15-12-21 22:08:36.213 -05 000000047 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1379241 enc / 13.792 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:08:36.213 -05 000000047 INF: FPGA: Xmit ZARM 17769\n 15-12-21 22:08:36.214 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:36.276 -05 000000079 INF: FPGA: Recv ZARM 15-12-21 22:08:36.276 -05 000000047 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.0732 ms 15-12-21 22:08:36.276 -05 000000047 INF: Z Motor: ArmAbsStepped took 118.7729 ms 15-12-21 22:08:36.277 -05 000000047 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:36.279 -05 000000047 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:36.286 -05 000000047 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:08:36.292 -05 000000047 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:36.297 -05 000000047 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:08:36.301 -05 000000047 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:36.303 -05 000000047 INF: ====================================== 15-12-21 22:08:36.337 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:36.343 -05 000000084 INF: X Motor: Xmit PR ER\n 15-12-21 22:08:36.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:36.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:36.408 -05 000000084 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:08:36.408 -05 000000084 INF: X Motor: Moved to 17.1665 after 748 ms 15-12-21 22:08:36.410 -05 000000084 INF: ====================================== 15-12-21 22:08:36.582 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:36.696 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:36.719 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:36.748 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.985C:A1\r\n 15-12-21 22:08:36.748 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:36.900 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:36.946 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:36.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:36.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:37.053 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:37.053 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:08:37.140 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:37.154 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:08:37.199 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:37.199 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:37.264 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 22:08:37.264 -05 000000062 INF: Current Position of Pump is: 23040 15-12-21 22:08:37.264 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:08:37.364 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:08:37.426 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:37.566 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:37.640 -05 000000048 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:08:37.640 -05 000000048 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:08:37.640 -05 000000048 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:08:37.641 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:37.891 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:37.948 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:37.948 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:37.949 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:08:37.949 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:38.108 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:08:38.108 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:38.236 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:08:38.293 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:08:38.293 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:38.788 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:38.811 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:08:38.811 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:38.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:38.922 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:38.923 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:38.925 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:38.925 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:38.933 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:38.933 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°=================== 15-12-21 22:08:38.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:38.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:39.039 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:20.00\r 15-12-21 22:08:39.055 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:08:39.055 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:39.057 -05 000000034 INF: Y Motor: Moved to 70.6885 after 3497 ms 15-12-21 22:08:39.058 -05 000000034 INF: ====================================== 15-12-21 22:08:39.061 -05 000000043 INF: ===================Move X,Y=================== 15-12-21 22:08:39.063 -05 000000043 INF: ====================================== 15-12-21 22:08:39.159 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:39.166 -05 000000048 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:08:39.166 -05 000000048 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:08:39.166 -05 000000048 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:08:39.167 -05 000000048 INF: ====================================== 15-12-21 22:08:39.172 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:08:39.175 -05 000000029 INF: ====================================== 15-12-21 22:08:39.181 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:39.181 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:39.181 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:08:39.186 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:39.186 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:08:39.243 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:08:39.244 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:08:39.281 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 22:08:39.302 -05 000000024 INF: FPGA: Recv ZFREQCL 15-12-21 22:08:39.303 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:08:39.304 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:39.304 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:08:39.304 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:39.304 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:08:39.364 -05 000000048 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:08:39.364 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:08:39.365 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:08:39.366 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:08:39.367 -05 000000041 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:08:39.367 -05 000000037 INF: ===================TDI FPGA Arm=================== 15-12-21 22:08:39.368 -05 000000041 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:08:39.380 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:08:39.385 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:08:39.385 -05 000000037 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:08:39.420 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:39.420 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:39.421 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:39.422 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:39.422 -05 000000062 INF: WaitCommand(15000) start 15-12-21 22:08:39.423 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 15 of 15 seconds left=================== 15-12-21 22:08:39.430 -05 000000047 INF: FPGA: Recv TDIYPOS 15-12-21 22:08:39.431 -05 000000041 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:08:39.431 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:08:39.432 -05 000000041 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:08:39.432 -05 000000041 INF: ====================================== 15-12-21 22:08:39.434 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:08:39.436 -05 000000037 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:08:39.492 -05 000000036 INF: FPGA: Recv TDIYARM3 15-12-21 22:08:39.492 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:08:39.493 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:39.493 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:39.499 -05 000000037 INF: ===================TDI FPGA Arm=================== 15-12-21 22:08:39.504 -05 000000037 INF: ====================================== 15-12-21 22:08:39.506 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:08:39.507 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:39.508 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:39.515 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:39.517 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:39.525 -05 000000029 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:08:39.525 -05 000000074 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:08:39.525 -05 000000029 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:08:39.525 -05 000000029 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:08:39.525 -05 000000029 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:08:39.525 -05 000000029 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:08:39.525 -05 000000074 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:08:39.525 -05 000000074 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:08:39.525 -05 000000074 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:08:39.533 -05 000000074 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:08:39.677 -05 000000033 INF: FPGA: Recv EX1MV 15-12-21 22:08:39.677 -05 000000074 INF: Excitation Filter 1: Moved -36 steps in 151.7498 ms 15-12-21 22:08:39.677 -05 000000074 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 151.9459 ms 15-12-21 22:08:39.677 -05 000000074 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 152.0426 ms 15-12-21 22:08:39.678 -05 000000074 INF: ====================================== 15-12-21 22:08:39.928 -05 000000090 INF: FPGA: Recv EX2MV 15-12-21 22:08:39.928 -05 000000029 INF: Excitation Filter 2: Moved -107 steps in 402.9009 ms 15-12-21 22:08:39.928 -05 000000029 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 403.0234 ms 15-12-21 22:08:39.928 -05 000000029 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 403.1155 ms 15-12-21 22:08:39.929 -05 000000029 INF: ====================================== 15-12-21 22:08:39.931 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:39.937 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:39.942 -05 000000054 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:08:39.942 -05 000000036 INF: ===================Camera TDI=================== 15-12-21 22:08:39.942 -05 000000041 INF: ===================Move Y Motor without settling=================== 15-12-21 22:08:39.943 -05 000000041 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:08:39.943 -05 000000041 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:08:39.943 -05 000000074 INF: ===================FPGA Z Wait=================== 15-12-21 22:08:39.943 -05 000000074 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:08:39.947 -05 000000041 INF: Y Motor: Xmit 1G\n 15-12-21 22:08:39.955 -05 000000054 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:08:39.956 -05 000000054 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:08:39.956 -05 000000036 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:08:39.962 -05 000000065 INF: ===================Camera TDI=================== 15-12-21 22:08:39.963 -05 000000049 INF: ===================Camera TDI=================== 15-12-21 22:08:39.991 -05 000000041 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:08:39.992 -05 000000041 INF: Y Motor: Recv 1G\r\n 15-12-21 22:08:39.993 -05 000000041 INF: Y Motor: Xmit 1D\n 15-12-21 22:08:40.055 -05 000000041 INF: Y Motor: Recv 1D\r\n 15-12-21 22:08:40.056 -05 000000041 INF: Y Motor: Recv *407662\r\n 15-12-21 22:08:40.057 -05 000000041 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:08:40.238 -05 000000084 INF: FPGA: Recv ZWAIT 15-12-21 22:08:40.239 -05 000000074 INF: ====================================== 15-12-21 22:08:40.415 -05 000000049 INF: ===================Frame #2=================== 15-12-21 22:08:40.431 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:40.432 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 14 of 15 seconds left=================== 15-12-21 22:08:40.432 -05 000000065 INF: ===================Frame #3=================== 15-12-21 22:08:40.578 -05 000000049 INF: ===================Frame #14=================== 15-12-21 22:08:40.582 -05 000000065 INF: ===================Frame #15=================== 15-12-21 22:08:40.739 -05 000000065 INF: ===================Frame #27=================== 15-12-21 22:08:40.805 -05 000000049 INF: ===================Frame #33=================== 15-12-21 22:08:40.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:40.891 -05 000000065 INF: ===================Frame #39=================== 15-12-21 22:08:40.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:40.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:40.917 -05 000000066 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206=================== 15-12-21 22:08:40.917 -05 000000011 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206=================== 15-12-21 22:08:40.924 -05 000000040 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2209, Registering and Extracting C039 L001 T2210=================== 15-12-21 22:08:40.924 -05 000000051 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2209, Registering and Extracting C039 L001 T2210=================== 15-12-21 22:08:40.957 -05 000000049 INF: ===================Frame #44=================== 15-12-21 22:08:41.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:41.057 -05 000000065 INF: ===================Frame #52=================== 15-12-21 22:08:41.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:41.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:41.166 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:41.241 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 62.330C:A1\r\n 15-12-21 22:08:41.241 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:41.244 -05 000000049 INF: ===================Frame #67=================== 15-12-21 22:08:41.345 -05 000000065 INF: ===================Frame #75=================== 15-12-21 22:08:41.362 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:41.389 -05 000000060 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2209=================== 15-12-21 22:08:41.395 -05 000000049 INF: ===================Frame #79=================== 15-12-21 22:08:41.427 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:41.427 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:41.434 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:41.434 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 13 of 15 seconds left=================== 15-12-21 22:08:41.456 -05 000000027 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2209, Registering and Extracting C039 L001 T2211=================== 15-12-21 22:08:41.495 -05 000000065 INF: ===================Frame #87=================== 15-12-21 22:08:41.511 -05 000000089 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2209=================== 15-12-21 22:08:41.545 -05 000000049 INF: ===================Frame #91=================== 15-12-21 22:08:41.557 -05 000000088 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2209, Registering and Extracting C039 L001 T2212=================== 15-12-21 22:08:41.582 -05 000000076 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2209=================== 15-12-21 22:08:41.646 -05 000000075 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206=================== 15-12-21 22:08:41.646 -05 000000065 INF: ===================Frame #99=================== 15-12-21 22:08:41.658 -05 000000031 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2213=================== 15-12-21 22:08:41.658 -05 000000072 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2213, Registering and Extracting C039 L001 T2214=================== 15-12-21 22:08:41.692 -05 000000038 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2213=================== 15-12-21 22:08:41.696 -05 000000049 INF: ===================Frame #103=================== 15-12-21 22:08:41.706 -05 000000077 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206=================== 15-12-21 22:08:41.759 -05 000000044 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2215=================== 15-12-21 22:08:41.760 -05 000000020 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2215, Registering and Extracting C039 L001 T2216=================== 15-12-21 22:08:41.799 -05 000000065 INF: ===================Frame #111=================== 15-12-21 22:08:41.869 -05 000000049 INF: ===================Frame #117=================== 15-12-21 22:08:41.900 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:41.943 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.986C:A1\r\n 15-12-21 22:08:41.943 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:41.950 -05 000000065 INF: ===================Frame #123=================== 15-12-21 22:08:42.037 -05 000000049 INF: ===================Frame #130=================== 15-12-21 22:08:42.100 -05 000000065 INF: ===================Frame #135=================== 15-12-21 22:08:42.250 -05 000000065 INF: ===================Frame #147=================== 15-12-21 22:08:42.436 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:42.436 -05 000000065 INF: ===================Frame #161=================== 15-12-21 22:08:42.436 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 12 of 15 seconds left=================== 15-12-21 22:08:42.588 -05 000000065 INF: ===================Frame #173=================== 15-12-21 22:08:42.700 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:42.778 -05 000000065 INF: ===================Frame #188=================== 15-12-21 22:08:42.779 -05 000000049 INF: ===================Frame #188=================== 15-12-21 22:08:42.780 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:42.780 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:42.931 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:42.957 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:42.957 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:43.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:43.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:43.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:43.399 -05 000000049 INF: ===================Frame #238=================== 15-12-21 22:08:43.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:43.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 11 of 15 seconds left=================== 15-12-21 22:08:43.659 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:43.698 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:08:43.698 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:43.950 -05 000000049 INF: ===================Frame #281=================== 15-12-21 22:08:43.999 -05 000000065 INF: ===================Frame #285=================== 15-12-21 22:08:44.101 -05 000000049 INF: ===================Frame #293=================== 15-12-21 22:08:44.150 -05 000000065 INF: ===================Frame #297=================== 15-12-21 22:08:44.257 -05 000000049 INF: ===================Frame #305=================== 15-12-21 22:08:44.301 -05 000000065 INF: ===================Frame #309=================== 15-12-21 22:08:44.409 -05 000000049 INF: ===================Frame #317=================== 15-12-21 22:08:44.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:44.440 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:44.440 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:44.452 -05 000000065 INF: ===================Frame #321=================== 15-12-21 22:08:44.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:44.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 10 of 15 seconds left=================== 15-12-21 22:08:44.541 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:44.560 -05 000000049 INF: ===================Frame #329=================== 15-12-21 22:08:44.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:44.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:44.602 -05 000000065 INF: ===================Frame #333=================== 15-12-21 22:08:44.670 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:44.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:44.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:44.711 -05 000000049 INF: ===================Frame #341=================== 15-12-21 22:08:44.752 -05 000000065 INF: ===================Frame #345=================== 15-12-21 22:08:44.862 -05 000000049 INF: ===================Frame #353=================== 15-12-21 22:08:44.868 -05 000000040 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206, Registering and Extracting C039 L001 T2215=================== 15-12-21 22:08:44.902 -05 000000065 INF: ===================Frame #356=================== 15-12-21 22:08:44.947 -05 000000051 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205, Registering and Extracting C039 L001 T2206=================== 15-12-21 22:08:45.012 -05 000000049 INF: ===================Frame #365=================== 15-12-21 22:08:45.164 -05 000000049 INF: ===================Frame #377=================== 15-12-21 22:08:45.314 -05 000000049 INF: ===================Frame #389=================== 15-12-21 22:08:45.441 -05 000000065 INF: ===================Frame #399=================== 15-12-21 22:08:45.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:45.464 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 9 of 15 seconds left=================== 15-12-21 22:08:45.464 -05 000000049 INF: ===================Frame #401=================== 15-12-21 22:08:45.593 -05 000000065 INF: ===================Frame #411=================== 15-12-21 22:08:45.616 -05 000000049 INF: ===================Frame #413=================== 15-12-21 22:08:45.744 -05 000000065 INF: ===================Frame #423=================== 15-12-21 22:08:45.767 -05 000000049 INF: ===================Frame #425=================== 15-12-21 22:08:45.820 -05 000000027 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204, Registering and Extracting C039 L001 T2205=================== 15-12-21 22:08:45.895 -05 000000065 INF: ===================Frame #435=================== 15-12-21 22:08:45.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:45.921 -05 000000049 INF: ===================Frame #437=================== 15-12-21 22:08:45.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:45.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:46.045 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:46.046 -05 000000065 INF: ===================Frame #447=================== 15-12-21 22:08:46.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:46.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:46.072 -05 000000049 INF: ===================Frame #449=================== 15-12-21 22:08:46.166 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:46.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:46.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:46.197 -05 000000065 INF: ===================Frame #459=================== 15-12-21 22:08:46.222 -05 000000049 INF: ===================Frame #461=================== 15-12-21 22:08:46.348 -05 000000065 INF: ===================Frame #471=================== 15-12-21 22:08:46.363 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:46.372 -05 000000049 INF: ===================Frame #473=================== 15-12-21 22:08:46.436 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 56.668C:A1\r\n 15-12-21 22:08:46.436 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:46.465 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:46.466 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 8 of 15 seconds left=================== 15-12-21 22:08:46.498 -05 000000065 INF: ===================Frame #483=================== 15-12-21 22:08:46.522 -05 000000049 INF: ===================Frame #484=================== 15-12-21 22:08:46.648 -05 000000065 INF: ===================Frame #494=================== 15-12-21 22:08:46.787 -05 000000088 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203, Registering and Extracting C039 L001 T2204=================== 15-12-21 22:08:47.069 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:47.104 -05 000000065 INF: ===================Frame #530=================== 15-12-21 22:08:47.118 -05 000000049 INF: ===================Frame #532=================== 15-12-21 22:08:47.121 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.029C:A1\r\n 15-12-21 22:08:47.121 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:47.145 -05 000000031 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202, Registering and Extracting C039 L001 T2203=================== 15-12-21 22:08:47.182 -05 000000072 INF: ===================Registering and Extracting C039 L001 T2201, Registering and Extracting C039 L001 T2202=================== 15-12-21 22:08:47.271 -05 000000044 INF: ===================Registering and Extracting C039 L001 T2201=================== 15-12-21 22:08:47.277 -05 000000020 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:08:47.332 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:47.339 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:08:47.351 -05 000000065 INF: ===================Frame #550=================== 15-12-21 22:08:47.381 -05 000000049 INF: ===================Frame #552=================== 15-12-21 22:08:47.412 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:47.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:47.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:47.456 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:47.462 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:08:47.466 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:47.466 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 7 of 15 seconds left=================== 15-12-21 22:08:47.532 -05 000000065 INF: ===================Frame #564=================== 15-12-21 22:08:47.542 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:47.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:47.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:47.560 -05 000000049 INF: ===================Frame #567=================== 15-12-21 22:08:47.563 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:47.575 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:08:47.665 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:47.683 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:47.683 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:47.706 -05 000000065 INF: ===================Frame #578=================== 15-12-21 22:08:47.710 -05 000000049 INF: ===================Frame #578=================== 15-12-21 22:08:47.745 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:47.755 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:08:47.842 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:47.893 -05 000000065 INF: ===================Frame #593=================== 15-12-21 22:08:47.920 -05 000000049 INF: ===================Frame #595=================== 15-12-21 22:08:48.044 -05 000000065 INF: ===================Frame #605=================== 15-12-21 22:08:48.071 -05 000000049 INF: ===================Frame #607=================== 15-12-21 22:08:48.195 -05 000000065 INF: ===================Frame #617=================== 15-12-21 22:08:48.221 -05 000000049 INF: ===================Frame #619=================== 15-12-21 22:08:48.345 -05 000000065 INF: ===================Frame #629=================== 15-12-21 22:08:48.372 -05 000000049 INF: ===================Frame #631=================== 15-12-21 22:08:48.468 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:48.468 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 6 of 15 seconds left=================== 15-12-21 22:08:48.495 -05 000000065 INF: ===================Frame #640=================== 15-12-21 22:08:48.522 -05 000000049 INF: ===================Frame #643=================== 15-12-21 22:08:48.599 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:08:48.673 -05 000000049 INF: ===================Frame #654=================== 15-12-21 22:08:48.737 -05 000000065 INF: ===================Frame #660=================== 15-12-21 22:08:48.949 -05 000000065 INF: ===================Frame #676=================== 15-12-21 22:08:48.966 -05 000000049 INF: ===================Frame #678=================== 15-12-21 22:08:48.973 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:48.992 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:08:48.992 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:49.094 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:49.124 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:49.124 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:49.129 -05 000000065 INF: ===================Frame #691=================== 15-12-21 22:08:49.155 -05 000000049 INF: ===================Frame #693=================== 15-12-21 22:08:49.227 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:49.279 -05 000000065 INF: ===================Frame #702=================== 15-12-21 22:08:49.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:49.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:49.306 -05 000000049 INF: ===================Frame #705=================== 15-12-21 22:08:49.414 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:49.430 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:49.430 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:49.458 -05 000000049 INF: ===================Frame #716=================== 15-12-21 22:08:49.464 -05 000000065 INF: ===================Frame #717=================== 15-12-21 22:08:49.469 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:49.469 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 5 of 15 seconds left=================== 15-12-21 22:08:49.615 -05 000000065 INF: ===================Frame #729=================== 15-12-21 22:08:49.657 -05 000000049 INF: ===================Frame #732=================== 15-12-21 22:08:49.765 -05 000000065 INF: ===================Frame #741=================== 15-12-21 22:08:49.830 -05 000000049 INF: ===================Frame #746=================== 15-12-21 22:08:49.915 -05 000000065 INF: ===================Frame #753=================== 15-12-21 22:08:49.997 -05 000000049 INF: ===================Frame #759=================== 15-12-21 22:08:50.066 -05 000000065 INF: ===================Frame #765=================== 15-12-21 22:08:50.149 -05 000000049 INF: ===================Frame #771=================== 15-12-21 22:08:50.217 -05 000000065 INF: ===================Frame #777=================== 15-12-21 22:08:50.300 -05 000000049 INF: ===================Frame #783=================== 15-12-21 22:08:50.374 -05 000000065 INF: ===================Frame #789=================== 15-12-21 22:08:50.450 -05 000000049 INF: ===================Frame #795=================== 15-12-21 22:08:50.469 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:50.469 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 4 of 15 seconds left=================== 15-12-21 22:08:50.526 -05 000000065 INF: ===================Frame #801=================== 15-12-21 22:08:50.600 -05 000000049 INF: ===================Frame #807=================== 15-12-21 22:08:50.652 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:50.676 -05 000000065 INF: ===================Frame #813=================== 15-12-21 22:08:50.679 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:50.679 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:50.752 -05 000000049 INF: ===================Frame #819=================== 15-12-21 22:08:50.780 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:50.803 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:50.803 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:50.826 -05 000000065 INF: ===================Frame #825=================== 15-12-21 22:08:50.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:50.902 -05 000000049 INF: ===================Frame #831=================== 15-12-21 22:08:50.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:50.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:50.977 -05 000000065 INF: ===================Frame #837=================== 15-12-21 22:08:51.053 -05 000000049 INF: ===================Frame #843=================== 15-12-21 22:08:51.127 -05 000000065 INF: ===================Frame #849=================== 15-12-21 22:08:51.204 -05 000000049 INF: ===================Frame #855=================== 15-12-21 22:08:51.277 -05 000000065 INF: ===================Frame #860=================== 15-12-21 22:08:51.355 -05 000000049 INF: ===================Frame #866=================== 15-12-21 22:08:51.474 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:51.475 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 3 of 15 seconds left=================== 15-12-21 22:08:51.541 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:51.551 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 51.975C:A1\r\n 15-12-21 22:08:51.551 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:51.741 -05 000000065 INF: ===================Frame #897=================== 15-12-21 22:08:51.786 -05 000000049 INF: ===================Frame #901=================== 15-12-21 22:08:51.891 -05 000000065 INF: ===================Frame #909=================== 15-12-21 22:08:51.936 -05 000000049 INF: ===================Frame #912=================== 15-12-21 22:08:52.044 -05 000000065 INF: ===================Frame #921=================== 15-12-21 22:08:52.156 -05 000000049 INF: ===================Frame #930=================== 15-12-21 22:08:52.159 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:52.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:52.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:52.195 -05 000000065 INF: ===================Frame #933=================== 15-12-21 22:08:52.280 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:52.345 -05 000000065 INF: ===================Frame #945=================== 15-12-21 22:08:52.346 -05 000000049 INF: ===================Frame #945=================== 15-12-21 22:08:52.367 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.065C:A1\r\n 15-12-21 22:08:52.367 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:52.470 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:52.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:52.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 2 of 15 seconds left=================== 15-12-21 22:08:52.488 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:52.488 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:52.496 -05 000000065 INF: ===================Frame #957=================== 15-12-21 22:08:52.496 -05 000000049 INF: ===================Frame #957=================== 15-12-21 22:08:52.588 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:52.612 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:52.612 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:52.647 -05 000000065 INF: ===================Frame #969=================== 15-12-21 22:08:52.647 -05 000000049 INF: ===================Frame #969=================== 15-12-21 22:08:52.798 -05 000000065 INF: ===================Frame #981=================== 15-12-21 22:08:52.798 -05 000000049 INF: ===================Frame #981=================== 15-12-21 22:08:52.949 -05 000000049 INF: ===================Frame #992=================== 15-12-21 22:08:52.949 -05 000000065 INF: ===================Frame #992=================== 15-12-21 22:08:53.261 -05 000000049 INF: ===================Frame #1017=================== 15-12-21 22:08:53.355 -05 000000065 INF: ===================Frame #1025=================== 15-12-21 22:08:53.411 -05 000000049 INF: ===================Frame #1029=================== 15-12-21 22:08:53.477 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:53.477 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 1 of 15 seconds left=================== 15-12-21 22:08:53.506 -05 000000065 INF: ===================Frame #1036=================== 15-12-21 22:08:53.561 -05 000000049 INF: ===================Frame #1041=================== 15-12-21 22:08:53.710 -05 000000065 INF: ===================Frame #1052=================== 15-12-21 22:08:53.711 -05 000000049 INF: ===================Frame #1053=================== 15-12-21 22:08:53.839 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:53.865 -05 000000049 INF: ===================Frame #1065=================== 15-12-21 22:08:53.865 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:53.865 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:53.880 -05 000000065 INF: ===================Frame #1066=================== 15-12-21 22:08:53.971 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:53.986 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:53.986 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:54.016 -05 000000049 INF: ===================Frame #1077=================== 15-12-21 22:08:54.050 -05 000000065 INF: ===================Frame #1080=================== 15-12-21 22:08:54.092 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:54.110 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:54.110 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:54.166 -05 000000049 INF: ===================Frame #1089=================== 15-12-21 22:08:54.214 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:54.221 -05 000000065 INF: ===================Frame #1093=================== 15-12-21 22:08:54.234 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 22:08:54.234 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:54.316 -05 000000049 INF: ===================Frame #1101=================== 15-12-21 22:08:54.371 -05 000000065 INF: ===================Frame #1105=================== 15-12-21 22:08:54.425 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:54.425 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:54.425 -05 000000062 INF: WaitCommand(15000) end 15-12-21 22:08:54.425 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:08:54.426 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:54.426 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:54.427 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:08:54.428 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:54.486 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:54.487 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Selecting Reagent USM (3)=================== 15-12-21 22:08:54.488 -05 000000049 INF: ===================Frame #1114=================== 15-12-21 22:08:54.489 -05 000000062 INF: Valve B2: Go to position 3 15-12-21 22:08:54.489 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:08:54.526 -05 000000065 INF: ===================Frame #1117=================== 15-12-21 22:08:54.547 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 22:08:54.547 -05 000000062 INF: Valve B2: 49.856 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:08:54.547 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 5 to 3 15-12-21 22:08:54.547 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC3\r 15-12-21 22:08:54.548 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:08:54.548 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:08:54.706 -05 000000065 INF: ===================Frame #1131=================== 15-12-21 22:08:55.130 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 3\r 15-12-21 22:08:55.130 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:55.130 -05 000000065 INF: ===================Frame #1164=================== 15-12-21 22:08:55.130 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:08:55.130 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:55.192 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:08:55.192 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:55.419 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:08:55.437 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:08:55.437 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:55.472 -05 000000049 INF: ===================Frame #1192=================== 15-12-21 22:08:55.500 -05 000000065 INF: ===================Frame #1194=================== 15-12-21 22:08:55.544 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:55.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:55.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:55.718 -05 000000065 INF: ===================Frame #1211=================== 15-12-21 22:08:55.724 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:08:55.747 -05 000000049 INF: ===================Frame #1214=================== 15-12-21 22:08:55.750 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:08:55.750 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:55.855 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:55.856 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:08:55.856 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:08:55.856 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:55.868 -05 000000065 INF: ===================Frame #1223=================== 15-12-21 22:08:55.874 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:55.874 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:55.924 -05 000000049 INF: ===================Frame #1228=================== 15-12-21 22:08:55.934 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:08:55.944 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 3, aspirate port PortB, aspiration rate 750, dispense rate 2500, volume 75, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:08:55.976 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:56.002 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:56.002 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:56.018 -05 000000065 INF: ===================Frame #1235=================== 15-12-21 22:08:56.034 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:08:56.097 -05 000000049 INF: ===================Frame #1241=================== 15-12-21 22:08:56.121 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 22:08:56.121 -05 000000062 INF: Current Position of Pump is: 23040 15-12-21 22:08:56.121 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB=================== 15-12-21 22:08:56.171 -05 000000065 INF: ===================Frame #1247=================== 15-12-21 22:08:56.222 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V2400s231P14400R\r 15-12-21 22:08:56.229 -05 000000078 INF: FPGA: Recv TDIYWAIT 15-12-21 22:08:56.229 -05 000000054 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:08:56.234 -05 000000054 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:08:56.246 -05 000000063 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:08:56.246 -05 000000061 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:08:56.246 -05 000000063 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:08:56.246 -05 000000063 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:08:56.246 -05 000000063 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:08:56.246 -05 000000061 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:08:56.246 -05 000000063 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:08:56.246 -05 000000061 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:08:56.246 -05 000000061 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:08:56.248 -05 000000061 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:08:56.249 -05 000000049 INF: ===================Frame #1250=================== 15-12-21 22:08:56.300 -05 000000049 INF: Camera complete - got 1250 frames. 15-12-21 22:08:56.301 -05 000000049 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:08:56.312 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:56.421 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:56.433 -05 000000084 INF: FPGA: Recv EX1MV 15-12-21 22:08:56.434 -05 000000063 INF: Excitation Filter 1: Moved 36 steps in 187.4572 ms 15-12-21 22:08:56.434 -05 000000063 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 187.5922 ms 15-12-21 22:08:56.434 -05 000000063 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 187.6594 ms 15-12-21 22:08:56.435 -05 000000063 INF: ====================================== 15-12-21 22:08:56.511 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:56.527 -05 000000065 INF: ===================Frame #1250=================== 15-12-21 22:08:56.527 -05 000000049 INF: ===================Camera TDI=================== 15-12-21 22:08:56.581 -05 000000049 INF: ====================================== 15-12-21 22:08:56.637 -05 000000092 INF: FPGA: Recv EX2MV 15-12-21 22:08:56.637 -05 000000061 INF: Excitation Filter 2: Moved 107 steps in 390.8695 ms 15-12-21 22:08:56.637 -05 000000061 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 391.0236 ms 15-12-21 22:08:56.637 -05 000000061 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 391.1074 ms 15-12-21 22:08:56.638 -05 000000061 INF: ====================================== 15-12-21 22:08:56.640 -05 000000054 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:08:56.642 -05 000000054 INF: ====================================== 15-12-21 22:08:56.658 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:08:56.716 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 47.738C:A1\r\n 15-12-21 22:08:56.716 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:56.734 -05 000000065 INF: Camera complete - got 1250 frames. 15-12-21 22:08:56.738 -05 000000065 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:08:56.774 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:56.864 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:56.912 -05 000000065 INF: ===================Camera TDI=================== 15-12-21 22:08:56.936 -05 000000065 INF: ====================================== 15-12-21 22:08:56.938 -05 000000036 INF: ===================Camera TDI=================== 15-12-21 22:08:56.941 -05 000000036 INF: ====================================== 15-12-21 22:08:57.045 -05 000000041 INF: Y Motor: Moved to 9.0765 after 16987 ms 15-12-21 22:08:57.046 -05 000000041 INF: ====================================== 15-12-21 22:08:57.049 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:57.052 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:08:57.057 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.059 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:08:57.104 -05 000000047 INF: FPGA: Recv TDICLINES 9437 15-12-21 22:08:57.104 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:08:57.114 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:57.167 -05 000000061 INF: FPGA: Recv TDIYERD 907648 15-12-21 22:08:57.167 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:08:57.168 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:57.229 -05 000000086 INF: FPGA: Recv ZADCR 23414 15-12-21 22:08:57.229 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.089. Y moved -60.304 mm 15-12-21 22:08:57.229 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:08:57.271 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:57.291 -05 000000054 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:08:57.291 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:08:57.291 -05 000000057 INF: TDIScan finished after 22100.0162 ms 15-12-21 22:08:57.292 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:08:57.292 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:08:57.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:57.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:57.295 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.323 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.043 um 15-12-21 22:08:57.324 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.332 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.338 -05 000000074 INF: ===================Dither Clean Up Command=================== 15-12-21 22:08:57.340 -05 000000023 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:08:57.342 -05 000000084 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:08:57.342 -05 000000023 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:08:57.342 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:08:57.342 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:08:57.342 -05 000000086 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:08:57.342 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:08:57.351 -05 000000086 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:08:57.351 -05 000000033 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:57.352 -05 000000033 INF: ===================LFT:Extracting coords=================== 15-12-21 22:08:57.403 -05 000000033 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:57.405 -05 000000033 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:08:57.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:57.414 -05 000000047 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:57.414 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:57.414 -05 000000065 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:57.418 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:57.418 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:57.423 -05 000000043 INF: FPGA: Recv ZSTEP 15-12-21 22:08:57.423 -05 000000043 INF: FPGA: Recv ZSEL 15-12-21 22:08:57.423 -05 000000086 INF: FPGA: Xmit ZDACW 28255\n 15-12-21 22:08:57.423 -05 000000047 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:57.423 -05 000000045 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:57.423 -05 000000055 INF: ====================================== 15-12-21 22:08:57.423 -05 000000065 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:57.424 -05 000000023 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:08:57.424 -05 000000024 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:08:57.426 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:57.426 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:57.427 -05 000000084 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:08:57.427 -05 000000023 INF: ====================================== 15-12-21 22:08:57.479 -05 000000022 INF: FPGA: Recv ZDACW 15-12-21 22:08:57.480 -05 000000084 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:08:57.480 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:57.480 -05 000000086 INF: ====================================== 15-12-21 22:08:57.481 -05 000000084 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:08:57.481 -05 000000084 INF: ====================================== 15-12-21 22:08:57.538 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:08:57.598 -05 000000024 INF: LFT found best fwhm score 2.920001 in 127 ms 15-12-21 22:08:57.598 -05 000000024 INF: LFT found good score at index 5149 with fwhm value 2.920001. Next cycle, cycle 40 starting Z position for bottom surface is at -0.092 mm FC:A, C:39,L:2,B 15-12-21 22:08:57.599 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:57.599 -05 000000024 INF: ====================================== 15-12-21 22:08:57.608 -05 000000047 INF: LFT found best fwhm score 2.772877 in 138 ms 15-12-21 22:08:57.608 -05 000000047 INF: LFT found good score at index 6561 with fwhm value 2.772877. Next cycle, cycle 40 starting Z position for bottom surface is at -0.091 mm FC:A, C:39,L:2,B 15-12-21 22:08:57.608 -05 000000047 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:57.609 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.067C:A1\r\n 15-12-21 22:08:57.609 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:57.609 -05 000000047 INF: ====================================== 15-12-21 22:08:57.667 -05 000000045 INF: LFT found best fwhm score 2.749971 in 198 ms 15-12-21 22:08:57.667 -05 000000045 INF: LFT found good score at index 6549 with fwhm value 2.749971. Next cycle, cycle 40 starting Z position for bottom surface is at -0.091 mm FC:A, C:39,L:2,B 15-12-21 22:08:57.667 -05 000000065 INF: LFT found best fwhm score 2.785071 in 198 ms 15-12-21 22:08:57.667 -05 000000065 INF: LFT found good score at index 5041 with fwhm value 2.785071. Next cycle, cycle 40 starting Z position for bottom surface is at -0.092 mm FC:A, C:39,L:2,B 15-12-21 22:08:57.668 -05 000000045 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:57.668 -05 000000065 INF: ===================LookupFocusTracking=================== 15-12-21 22:08:57.668 -05 000000045 INF: ====================================== 15-12-21 22:08:57.669 -05 000000065 INF: ====================================== 15-12-21 22:08:57.678 -05 000000033 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:08:57.679 -05 000000033 INF: LFT weighted average best Z for bottom surface is at -0.091mm FC:A, C:39,L:2,B 15-12-21 22:08:57.679 -05 000000033 INF: ====================================== 15-12-21 22:08:57.680 -05 000000074 INF: ====================================== 15-12-21 22:08:57.689 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.690 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:08:57.690 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.691 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:08:57.692 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.695 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:08:57.695 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.695 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:08:57.695 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.695 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:08:57.696 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:08:57.696 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:08:57.697 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:08:57.697 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 22:08:57.697 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB=================== 15-12-21 22:08:57.697 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:08:57.699 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:08:57.701 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:08:57.701 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:08:57.702 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:08:57.702 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:08:57.706 -05 000000020 INF: ===================Registering and Extracting C039 L002 T2101=================== 15-12-21 22:08:57.706 -05 000000044 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102=================== 15-12-21 22:08:57.707 -05 000000072 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103=================== 15-12-21 22:08:57.707 -05 000000031 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105=================== 15-12-21 22:08:57.707 -05 000000088 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105=================== 15-12-21 22:08:57.708 -05 000000027 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2106=================== 15-12-21 22:08:57.709 -05 000000051 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2106, Registering and Extracting C039 L002 T2107=================== 15-12-21 22:08:57.710 -05 000000040 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2106, Registering and Extracting C039 L002 T2107, Registering and Extracting C039 L002 T2108=================== 15-12-21 22:08:57.718 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.718 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:08:57.718 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:08:57.719 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -107.8 um, section = B_1 15-12-21 22:08:57.723 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:08:57.724 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:57.724 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:08:57.731 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:57.731 -05 000000087 INF: ===================MoveEmissionFilters=================== 15-12-21 22:08:57.731 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:08:57.731 -05 000000049 INF: ===================Move X,Y=================== 15-12-21 22:08:57.732 -05 000000065 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:08:57.733 -05 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:08:57.733 -05 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:08:57.733 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:08:57.733 -05 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:08:57.733 -05 000000056 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:08:57.733 -05 000000049 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:08:57.737 -05 000000065 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:08:57.737 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:08:57.738 -05 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:08:57.738 -05 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:08:57.739 -05 000000074 INF: ===================Move X Motor without settling=================== 15-12-21 22:08:57.739 -05 000000047 INF: ===================Move Y Motor without settling=================== 15-12-21 22:08:57.739 -05 000000074 INF: X Motor: Xmit PR VM\n 15-12-21 22:08:57.739 -05 000000064 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:08:57.739 -05 000000047 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:08:57.739 -05 000000029 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:08:57.739 -05 000000064 INF: ====================================== 15-12-21 22:08:57.745 -05 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:08:57.745 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:08:57.745 -05 000000063 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:08:57.745 -05 000000078 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:08:57.745 -05 000000029 INF: ====================================== 15-12-21 22:08:57.745 -05 000000082 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:08:57.750 -05 000000081 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:08:57.750 -05 000000082 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:08:57.751 -05 000000082 INF: ====================================== 15-12-21 22:08:57.751 -05 000000081 INF: ====================================== 15-12-21 22:08:57.751 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:57.758 -05 000000041 INF: ===================Camera Arm TDI=================== 15-12-21 22:08:57.758 -05 000000037 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:08:57.758 -05 000000061 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:08:57.763 -05 000000078 INF: ====================================== 15-12-21 22:08:57.764 -05 000000037 INF: ====================================== 15-12-21 22:08:57.764 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:57.764 -05 000000047 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:08:57.767 -05 000000065 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:08:57.767 -05 000000047 INF: Y Motor: Xmit 1G\n 15-12-21 22:08:57.767 -05 000000063 INF: ====================================== 15-12-21 22:08:57.768 -05 000000090 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:08:57.768 -05 000000079 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:08:57.768 -05 000000079 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:08:57.772 -05 000000079 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:08:57.772 -05 000000061 INF: ====================================== 15-12-21 22:08:57.772 -05 000000033 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:08:57.776 -05 000000065 INF: ====================================== 15-12-21 22:08:57.776 -05 000000090 INF: ====================================== 15-12-21 22:08:57.777 -05 000000033 INF: ====================================== 15-12-21 22:08:57.780 -05 000000086 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:08:57.788 -05 000000086 INF: ====================================== 15-12-21 22:08:57.791 -05 000000055 INF: FPGA: Recv ZSEL 15-12-21 22:08:57.791 -05 000000079 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:08:57.795 -05 000000047 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:08:57.797 -05 000000074 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:08:57.797 -05 000000074 INF: X Motor: Xmit PR VI\n 15-12-21 22:08:57.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:57.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:57.798 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:57.798 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:57.798 -05 000000087 INF: ====================================== 15-12-21 22:08:57.808 -05 000000079 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:08:57.808 -05 000000079 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:08:57.808 -05 000000079 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:08:57.857 -05 000000009 INF: FPGA: Recv ZSTEP 15-12-21 22:08:57.858 -05 000000047 INF: Y Motor: Recv 1G\r\n 15-12-21 22:08:57.860 -05 000000074 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:08:57.860 -05 000000074 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:08:57.860 -05 000000047 INF: Y Motor: Xmit 1D\n 15-12-21 22:08:57.861 -05 000000074 INF: X Motor: Moving to 17.9390 mm @15.000 mm/sec, started at 17.1665 mm 15-12-21 22:08:57.861 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:57.861 -05 000000074 INF: X Motor: Xmit MA -16819\n 15-12-21 22:08:57.874 -05 000000079 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:08:57.875 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:57.883 -05 000000079 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:08:57.883 -05 000000079 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:08:57.883 -05 000000079 INF: Z Motor: Arming to move to -0.0678 mm 15-12-21 22:08:57.883 -05 000000079 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:08:57.924 -05 000000068 INF: FPGA: Recv ZYT 15-12-21 22:08:57.924 -05 000000079 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907647 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:08:57.924 -05 000000079 INF: FPGA: Xmit ZARM 17769\n 15-12-21 22:08:57.925 -05 000000047 INF: Y Motor: Recv 1D\r\n 15-12-21 22:08:57.926 -05 000000047 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:08:57.927 -05 000000047 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:08:57.929 -05 000000074 INF: X Motor: Recv MA -16819\r\n> 15-12-21 22:08:57.929 -05 000000074 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:08:57.980 -05 000000034 INF: FPGA: Recv ZARM 15-12-21 22:08:57.990 -05 000000079 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 65.6602 ms 15-12-21 22:08:57.990 -05 000000079 INF: Z Motor: ArmAbsStepped took 106.7555 ms 15-12-21 22:08:58.057 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:58.082 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:08:58.083 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:58.086 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:58.091 -05 000000079 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:08:58.092 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:58.094 -05 000000079 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:08:58.097 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:08:58.099 -05 000000079 INF: ====================================== 15-12-21 22:08:58.335 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:58.486 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:58.487 -05 000000074 INF: X Motor: Xmit PR ER\n 15-12-21 22:08:58.542 -05 000000074 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:08:58.542 -05 000000074 INF: X Motor: Moved to 17.9380 after 613 ms 15-12-21 22:08:58.543 -05 000000074 INF: ====================================== 15-12-21 22:08:58.783 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:58.887 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:59.162 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:59.183 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:08:59.242 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:08:59.242 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:59.242 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:59.343 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:08:59.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:59.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:59.396 -05 000000041 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:08:59.396 -05 000000041 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:08:59.396 -05 000000041 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:08:59.492 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:59.501 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:08:59.606 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:08:59.607 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:08:59.607 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:59.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:08:59.802 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:08:59.802 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:08:59.856 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:08:59.933 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:00.183 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:00.261 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:00.511 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:00.580 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:00.831 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:00.879 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:00.917 -05 000000041 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:09:00.917 -05 000000041 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:09:00.917 -05 000000041 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:09:00.918 -05 000000041 INF: ====================================== 15-12-21 22:09:00.924 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:09:00.933 -05 000000056 INF: ====================================== 15-12-21 22:09:01.046 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:01.069 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:01.069 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:01.131 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:01.176 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:01.192 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:01.254 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:01.254 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:01.357 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:01.380 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:01.380 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:01.442 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:01.505 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:01.507 -05 000000047 INF: Y Motor: Moved to 70.6885 after 3580 ms 15-12-21 22:09:01.508 -05 000000047 INF: ====================================== 15-12-21 22:09:01.510 -05 000000049 INF: ===================Move X,Y=================== 15-12-21 22:09:01.518 -05 000000049 INF: ====================================== 15-12-21 22:09:01.520 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:09:01.525 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:01.525 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:09:01.570 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:09:01.571 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:09:01.626 -05 000000023 INF: FPGA: Recv ZFREQCL 15-12-21 22:09:01.627 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:09:01.627 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:01.627 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:09:01.693 -05 000000054 INF: FPGA: Recv TDIYERD 7068852 15-12-21 22:09:01.693 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068852 counts (70.689 mm) 15-12-21 22:09:01.694 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:09:01.696 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:09:01.700 -05 000000074 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:09:01.700 -05 000000061 INF: ===================TDI FPGA Arm=================== 15-12-21 22:09:01.700 -05 000000074 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:09:01.706 -05 000000061 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:09:01.734 -05 000000061 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:09:01.741 -05 000000061 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:09:01.758 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:01.764 -05 000000068 INF: FPGA: Recv TDIYPOS 15-12-21 22:09:01.770 -05 000000074 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:09:01.770 -05 000000061 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:09:01.777 -05 000000074 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:09:01.778 -05 000000074 INF: ====================================== 15-12-21 22:09:01.779 -05 000000061 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:09:01.779 -05 000000061 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:09:01.815 -05 000000064 INF: FPGA: Recv TDIYARM3 15-12-21 22:09:01.816 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:01.817 -05 000000061 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:09:01.826 -05 000000061 INF: ===================TDI FPGA Arm=================== 15-12-21 22:09:01.828 -05 000000061 INF: ====================================== 15-12-21 22:09:01.831 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:09:01.837 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:01.838 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:09:01.839 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:09:01.840 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:09:01.842 -05 000000056 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:09:01.842 -05 000000056 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:09:01.842 -05 000000056 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:09:01.842 -05 000000056 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:09:01.842 -05 000000056 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:09:01.849 -05 000000022 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:09:01.850 -05 000000022 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:09:01.850 -05 000000022 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:09:01.850 -05 000000022 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:09:01.850 -05 000000022 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:09:01.863 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:09:01.966 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 43.664C:A1\r\n 15-12-21 22:09:01.966 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:02.017 -05 000000084 INF: FPGA: Recv EX1MV 15-12-21 22:09:02.017 -05 000000022 INF: Excitation Filter 1: Moved -36 steps in 167.5188 ms 15-12-21 22:09:02.017 -05 000000022 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 167.7269 ms 15-12-21 22:09:02.018 -05 000000022 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 167.8049 ms 15-12-21 22:09:02.019 -05 000000022 INF: ====================================== 15-12-21 22:09:02.066 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:02.143 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:02.207 -05 000000041 INF: FPGA: Recv EX2MV 15-12-21 22:09:02.207 -05 000000056 INF: Excitation Filter 2: Moved -107 steps in 365.1893 ms 15-12-21 22:09:02.207 -05 000000056 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 365.3836 ms 15-12-21 22:09:02.207 -05 000000056 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 365.4905 ms 15-12-21 22:09:02.209 -05 000000056 INF: ====================================== 15-12-21 22:09:02.211 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:09:02.231 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:09:02.233 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 22:09:02.236 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:09:02.236 -05 000000045 INF: ===================Move Y Motor without settling=================== 15-12-21 22:09:02.236 -05 000000048 INF: ===================FPGA Z Wait=================== 15-12-21 22:09:02.236 -05 000000048 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:09:02.239 -05 000000045 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:09:02.240 -05 000000045 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:09:02.240 -05 000000090 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:09:02.240 -05 000000028 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:09:02.240 -05 000000028 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:09:02.241 -05 000000045 INF: Y Motor: Xmit 1G\n 15-12-21 22:09:02.247 -05 000000068 INF: ===================Camera TDI=================== 15-12-21 22:09:02.247 -05 000000009 INF: ===================Camera TDI=================== 15-12-21 22:09:02.265 -05 000000072 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2106, Registering and Extracting C039 L002 T2107=================== 15-12-21 22:09:02.270 -05 000000045 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:09:02.271 -05 000000045 INF: Y Motor: Recv 1G\r\n 15-12-21 22:09:02.272 -05 000000045 INF: Y Motor: Xmit 1D\n 15-12-21 22:09:02.279 -05 000000077 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2106, Registering and Extracting C039 L002 T2107, Registering and Extracting C039 L002 T2109=================== 15-12-21 22:09:02.332 -05 000000045 INF: Y Motor: Recv 1D\r\n 15-12-21 22:09:02.333 -05 000000045 INF: Y Motor: Recv *407662\r\n 15-12-21 22:09:02.334 -05 000000045 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:09:02.402 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:02.458 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:02.579 -05 000000037 INF: FPGA: Recv ZWAIT 15-12-21 22:09:02.593 -05 000000048 INF: ====================================== 15-12-21 22:09:02.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:02.703 -05 000000068 INF: ===================Frame #1=================== 15-12-21 22:09:02.704 -05 000000009 INF: ===================Frame #1=================== 15-12-21 22:09:02.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:02.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:02.708 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:02.793 -05 000000027 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2106=================== 15-12-21 22:09:02.793 -05 000000031 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2106=================== 15-12-21 22:09:02.794 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:02.826 -05 000000088 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105=================== 15-12-21 22:09:02.851 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:09:02.869 -05 000000068 INF: ===================Frame #14=================== 15-12-21 22:09:02.869 -05 000000009 INF: ===================Frame #14=================== 15-12-21 22:09:02.896 -05 000000066 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111, Registering and Extracting C039 L002 T2112=================== 15-12-21 22:09:02.896 -05 000000038 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111, Registering and Extracting C039 L002 T2112=================== 15-12-21 22:09:02.896 -05 000000011 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111, Registering and Extracting C039 L002 T2112=================== 15-12-21 22:09:02.910 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.059C:A1\r\n 15-12-21 22:09:02.910 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:03.016 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:03.034 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:03.034 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:03.044 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:03.141 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:03.143 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:09:03.143 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:09:03.143 -05 000000009 INF: ===================Frame #36=================== 15-12-21 22:09:03.144 -05 000000068 INF: ===================Frame #36=================== 15-12-21 22:09:03.159 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:03.159 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:03.186 -05 000000020 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111=================== 15-12-21 22:09:03.196 -05 000000060 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111, Registering and Extracting C039 L002 T2113=================== 15-12-21 22:09:03.215 -05 000000044 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111=================== 15-12-21 22:09:03.243 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:09:03.303 -05 000000089 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111, Registering and Extracting C039 L002 T2114=================== 15-12-21 22:09:03.331 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 22:09:03.331 -05 000000062 INF: Current Position of Pump is: 37440 15-12-21 22:09:03.331 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:09:03.395 -05 000000051 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111=================== 15-12-21 22:09:03.402 -05 000000075 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111, Registering and Extracting C039 L002 T2115=================== 15-12-21 22:09:03.431 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:09:03.431 -05 000000068 INF: ===================Frame #59=================== 15-12-21 22:09:03.454 -05 000000009 INF: ===================Frame #60=================== 15-12-21 22:09:03.455 -05 000000040 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111=================== 15-12-21 22:09:03.514 -05 000000076 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111, Registering and Extracting C039 L002 T2116=================== 15-12-21 22:09:03.516 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:03.582 -05 000000068 INF: ===================Frame #70=================== 15-12-21 22:09:03.635 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:03.704 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:03.847 -05 000000009 INF: ===================Frame #91=================== 15-12-21 22:09:03.954 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:04.007 -05 000000009 INF: ===================Frame #104=================== 15-12-21 22:09:04.007 -05 000000068 INF: ===================Frame #104=================== 15-12-21 22:09:04.032 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:09:04.032 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:04.032 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:09:04.035 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:09:04.096 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:09:04.096 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:04.212 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:09:04.219 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:09:04.219 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:04.452 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:09:04.470 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:09:04.470 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:04.511 -05 000000068 INF: ===================Frame #144=================== 15-12-21 22:09:04.626 -05 000000009 INF: ===================Frame #153=================== 15-12-21 22:09:04.644 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:04.644 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:04.644 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:04.647 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:04.660 -05 000000062 INF: WaitCommand(5000) start 15-12-21 22:09:04.660 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 22:09:04.688 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:04.688 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:04.787 -05 000000009 INF: ===================Frame #166=================== 15-12-21 22:09:04.853 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:09:04.907 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:09:04.907 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:05.017 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:05.083 -05 000000068 INF: ===================Frame #189=================== 15-12-21 22:09:05.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:05.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:05.197 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:05.219 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:05.219 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:05.235 -05 000000068 INF: ===================Frame #201=================== 15-12-21 22:09:05.277 -05 000000009 INF: ===================Frame #205=================== 15-12-21 22:09:05.386 -05 000000068 INF: ===================Frame #213=================== 15-12-21 22:09:05.427 -05 000000009 INF: ===================Frame #216=================== 15-12-21 22:09:05.536 -05 000000068 INF: ===================Frame #225=================== 15-12-21 22:09:05.664 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:05.664 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:09:05.687 -05 000000068 INF: ===================Frame #237=================== 15-12-21 22:09:05.728 -05 000000009 INF: ===================Frame #240=================== 15-12-21 22:09:05.838 -05 000000068 INF: ===================Frame #249=================== 15-12-21 22:09:05.933 -05 000000009 INF: ===================Frame #256=================== 15-12-21 22:09:05.988 -05 000000068 INF: ===================Frame #261=================== 15-12-21 22:09:06.126 -05 000000009 INF: ===================Frame #272=================== 15-12-21 22:09:06.138 -05 000000068 INF: ===================Frame #273=================== 15-12-21 22:09:06.231 -05 000000077 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110, Registering and Extracting C039 L002 T2111=================== 15-12-21 22:09:06.289 -05 000000068 INF: ===================Frame #284=================== 15-12-21 22:09:06.320 -05 000000009 INF: ===================Frame #287=================== 15-12-21 22:09:06.447 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:06.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:06.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:06.471 -05 000000009 INF: ===================Frame #299=================== 15-12-21 22:09:06.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:06.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:06.591 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:06.622 -05 000000009 INF: ===================Frame #311=================== 15-12-21 22:09:06.665 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:06.665 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 22:09:06.696 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:06.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:06.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:06.778 -05 000000009 INF: ===================Frame #323=================== 15-12-21 22:09:06.842 -05 000000068 INF: ===================Frame #328=================== 15-12-21 22:09:06.921 -05 000000066 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105, Registering and Extracting C039 L002 T2110=================== 15-12-21 22:09:06.928 -05 000000009 INF: ===================Frame #335=================== 15-12-21 22:09:07.079 -05 000000009 INF: ===================Frame #347=================== 15-12-21 22:09:07.102 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:09:07.107 -05 000000068 INF: ===================Frame #349=================== 15-12-21 22:09:07.152 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 39.763C:A1\r\n 15-12-21 22:09:07.152 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:07.230 -05 000000009 INF: ===================Frame #359=================== 15-12-21 22:09:07.258 -05 000000068 INF: ===================Frame #361=================== 15-12-21 22:09:07.382 -05 000000009 INF: ===================Frame #371=================== 15-12-21 22:09:07.408 -05 000000068 INF: ===================Frame #373=================== 15-12-21 22:09:07.533 -05 000000009 INF: ===================Frame #383=================== 15-12-21 22:09:07.558 -05 000000068 INF: ===================Frame #385=================== 15-12-21 22:09:07.559 -05 000000038 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104, Registering and Extracting C039 L002 T2105=================== 15-12-21 22:09:07.665 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:07.665 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 22:09:07.683 -05 000000009 INF: ===================Frame #395=================== 15-12-21 22:09:07.708 -05 000000068 INF: ===================Frame #397=================== 15-12-21 22:09:07.834 -05 000000009 INF: ===================Frame #407=================== 15-12-21 22:09:07.858 -05 000000068 INF: ===================Frame #409=================== 15-12-21 22:09:07.985 -05 000000009 INF: ===================Frame #419=================== 15-12-21 22:09:08.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:08.008 -05 000000068 INF: ===================Frame #420=================== 15-12-21 22:09:08.026 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:08.026 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:08.126 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:09:08.139 -05 000000009 INF: ===================Frame #431=================== 15-12-21 22:09:08.150 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.052C:A1\r\n 15-12-21 22:09:08.150 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:08.253 -05 000000068 INF: ===================Frame #440=================== 15-12-21 22:09:08.254 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:08.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:08.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:08.290 -05 000000009 INF: ===================Frame #443=================== 15-12-21 22:09:08.379 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:08.402 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:08.402 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:08.423 -05 000000068 INF: ===================Frame #453=================== 15-12-21 22:09:08.440 -05 000000009 INF: ===================Frame #455=================== 15-12-21 22:09:08.476 -05 000000011 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103, Registering and Extracting C039 L002 T2104=================== 15-12-21 22:09:08.574 -05 000000068 INF: ===================Frame #465=================== 15-12-21 22:09:08.590 -05 000000009 INF: ===================Frame #466=================== 15-12-21 22:09:08.603 -05 000000060 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102, Registering and Extracting C039 L002 T2103=================== 15-12-21 22:09:08.665 -05 000000089 INF: ===================Registering and Extracting C039 L002 T2101, Registering and Extracting C039 L002 T2102=================== 15-12-21 22:09:08.665 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:08.665 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 22:09:08.669 -05 000000075 INF: ===================Registering and Extracting C039 L002 T2101=================== 15-12-21 22:09:08.698 -05 000000076 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:09:08.725 -05 000000068 INF: ===================Frame #477=================== 15-12-21 22:09:08.789 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:09:08.795 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:09:08.876 -05 000000068 INF: ===================Frame #489=================== 15-12-21 22:09:08.910 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:09:08.916 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:09:09.022 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:09:09.025 -05 000000009 INF: ===================Frame #501=================== 15-12-21 22:09:09.026 -05 000000068 INF: ===================Frame #501=================== 15-12-21 22:09:09.030 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:09:09.135 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:09:09.140 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:09:09.175 -05 000000009 INF: ===================Frame #513=================== 15-12-21 22:09:09.176 -05 000000068 INF: ===================Frame #513=================== 15-12-21 22:09:09.239 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:09:09.330 -05 000000068 INF: ===================Frame #525=================== 15-12-21 22:09:09.330 -05 000000009 INF: ===================Frame #525=================== 15-12-21 22:09:09.480 -05 000000068 INF: ===================Frame #537=================== 15-12-21 22:09:09.480 -05 000000009 INF: ===================Frame #537=================== 15-12-21 22:09:09.624 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:09.630 -05 000000009 INF: ===================Frame #549=================== 15-12-21 22:09:09.630 -05 000000068 INF: ===================Frame #549=================== 15-12-21 22:09:09.648 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:09.648 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:09.661 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:09.661 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:09.661 -05 000000062 INF: WaitCommand(5000) end 15-12-21 22:09:09.662 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:09.669 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:09.672 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:09.690 -05 000000054 INF: ===================WaitCommand=================== 15-12-21 22:09:09.702 -05 000000054 INF: WaitCommand(10000) start 15-12-21 22:09:09.702 -05 000000023 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:09:09.702 -05 000000054 INF: ===================Delay 10 of 10 seconds left=================== 15-12-21 22:09:09.711 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:09.771 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:09:09.782 -05 000000068 INF: ===================Frame #561=================== 15-12-21 22:09:09.783 -05 000000009 INF: ===================Frame #561=================== 15-12-21 22:09:09.822 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:09.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:09.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:09.871 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:09.897 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:09:09.949 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:09.999 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:09:09.999 -05 000000068 INF: ===================Frame #574=================== 15-12-21 22:09:10.001 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:10.001 -05 000000009 INF: ===================Frame #573=================== 15-12-21 22:09:10.001 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:10.058 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 22:09:10.058 -05 000000023 INF: Current Position of Pump is: 37440 15-12-21 22:09:10.058 -05 000000023 INF: Dispense Steps 48000 is greater than steps to home syringe 37440, reducing number of steps to 37440 15-12-21 22:09:10.058 -05 000000023 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:09:10.133 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:09:10.154 -05 000000009 INF: ===================Frame #590=================== 15-12-21 22:09:10.172 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD37440R\r 15-12-21 22:09:10.186 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:09:10.186 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:10.332 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:10.432 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:10.491 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:10.711 -05 000000054 INF: ===================Delay 9 of 10 seconds left=================== 15-12-21 22:09:10.741 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:10.802 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:10.945 -05 000000068 INF: ===================Frame #653=================== 15-12-21 22:09:10.949 -05 000000009 INF: ===================Frame #653=================== 15-12-21 22:09:10.985 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:09:11.052 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:11.095 -05 000000068 INF: ===================Frame #665=================== 15-12-21 22:09:11.099 -05 000000009 INF: ===================Frame #665=================== 15-12-21 22:09:11.115 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:11.246 -05 000000068 INF: ===================Frame #676=================== 15-12-21 22:09:11.248 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:11.249 -05 000000009 INF: ===================Frame #677=================== 15-12-21 22:09:11.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:11.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:11.372 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:11.374 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:11.395 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:11.395 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:11.399 -05 000000009 INF: ===================Frame #689=================== 15-12-21 22:09:11.434 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:11.500 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:11.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:11.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:11.549 -05 000000009 INF: ===================Frame #700=================== 15-12-21 22:09:11.568 -05 000000068 INF: ===================Frame #702=================== 15-12-21 22:09:11.684 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:11.711 -05 000000054 INF: ===================Delay 8 of 10 seconds left=================== 15-12-21 22:09:11.753 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:11.773 -05 000000068 INF: ===================Frame #718=================== 15-12-21 22:09:11.852 -05 000000009 INF: ===================Frame #724=================== 15-12-21 22:09:11.943 -05 000000068 INF: ===================Frame #731=================== 15-12-21 22:09:12.003 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:12.028 -05 000000009 INF: ===================Frame #738=================== 15-12-21 22:09:12.065 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:12.093 -05 000000068 INF: ===================Frame #743=================== 15-12-21 22:09:12.194 -05 000000009 INF: ===================Frame #751=================== 15-12-21 22:09:12.243 -05 000000068 INF: ===================Frame #755=================== 15-12-21 22:09:12.263 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:09:12.315 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:12.332 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 36.371C:A1\r\n 15-12-21 22:09:12.335 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:12.344 -05 000000009 INF: ===================Frame #763=================== 15-12-21 22:09:12.377 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:12.393 -05 000000068 INF: ===================Frame #767=================== 15-12-21 22:09:12.494 -05 000000009 INF: ===================Frame #775=================== 15-12-21 22:09:12.543 -05 000000068 INF: ===================Frame #779=================== 15-12-21 22:09:12.627 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:12.644 -05 000000009 INF: ===================Frame #787=================== 15-12-21 22:09:12.689 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:12.693 -05 000000068 INF: ===================Frame #791=================== 15-12-21 22:09:12.712 -05 000000054 INF: ===================Delay 7 of 10 seconds left=================== 15-12-21 22:09:12.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:12.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:12.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:12.794 -05 000000009 INF: ===================Frame #799=================== 15-12-21 22:09:12.843 -05 000000068 INF: ===================Frame #803=================== 15-12-21 22:09:12.868 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:12.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:12.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:12.939 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:12.944 -05 000000009 INF: ===================Frame #811=================== 15-12-21 22:09:12.993 -05 000000068 INF: ===================Frame #814=================== 15-12-21 22:09:12.994 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:13.002 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:13.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:13.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:13.094 -05 000000009 INF: ===================Frame #822=================== 15-12-21 22:09:13.252 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:13.256 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:09:13.270 -05 000000068 INF: ===================Frame #836=================== 15-12-21 22:09:13.314 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:13.330 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.013C:A1\r\n 15-12-21 22:09:13.330 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:13.341 -05 000000009 INF: ===================Frame #842=================== 15-12-21 22:09:13.447 -05 000000068 INF: ===================Frame #850=================== 15-12-21 22:09:13.519 -05 000000009 INF: ===================Frame #856=================== 15-12-21 22:09:13.564 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:13.614 -05 000000068 INF: ===================Frame #864=================== 15-12-21 22:09:13.626 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:13.685 -05 000000009 INF: ===================Frame #869=================== 15-12-21 22:09:13.712 -05 000000054 INF: ===================Delay 6 of 10 seconds left=================== 15-12-21 22:09:13.778 -05 000000068 INF: ===================Frame #877=================== 15-12-21 22:09:13.835 -05 000000009 INF: ===================Frame #881=================== 15-12-21 22:09:13.876 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:13.928 -05 000000068 INF: ===================Frame #888=================== 15-12-21 22:09:13.938 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:13.985 -05 000000009 INF: ===================Frame #893=================== 15-12-21 22:09:14.100 -05 000000068 INF: ===================Frame #902=================== 15-12-21 22:09:14.135 -05 000000009 INF: ===================Frame #905=================== 15-12-21 22:09:14.188 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:14.240 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:14.250 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:14.268 -05 000000068 INF: ===================Frame #915=================== 15-12-21 22:09:14.269 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:14.269 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:14.285 -05 000000009 INF: ===================Frame #917=================== 15-12-21 22:09:14.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:14.391 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:14.391 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:14.418 -05 000000068 INF: ===================Frame #927=================== 15-12-21 22:09:14.435 -05 000000009 INF: ===================Frame #929=================== 15-12-21 22:09:14.494 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:14.500 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:14.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:14.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:14.562 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:14.568 -05 000000068 INF: ===================Frame #939=================== 15-12-21 22:09:14.585 -05 000000009 INF: ===================Frame #940=================== 15-12-21 22:09:14.712 -05 000000054 INF: ===================Delay 5 of 10 seconds left=================== 15-12-21 22:09:14.718 -05 000000068 INF: ===================Frame #951=================== 15-12-21 22:09:14.812 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:14.826 -05 000000009 INF: ===================Frame #959=================== 15-12-21 22:09:14.868 -05 000000068 INF: ===================Frame #963=================== 15-12-21 22:09:14.875 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:14.976 -05 000000009 INF: ===================Frame #971=================== 15-12-21 22:09:15.018 -05 000000068 INF: ===================Frame #975=================== 15-12-21 22:09:15.125 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:15.127 -05 000000009 INF: ===================Frame #983=================== 15-12-21 22:09:15.168 -05 000000068 INF: ===================Frame #986=================== 15-12-21 22:09:15.187 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:15.277 -05 000000009 INF: ===================Frame #995=================== 15-12-21 22:09:15.394 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:09:15.406 -05 000000068 INF: ===================Frame #1005=================== 15-12-21 22:09:15.427 -05 000000009 INF: ===================Frame #1007=================== 15-12-21 22:09:15.437 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:15.458 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 22:09:15.458 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:15.499 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:09:15.499 -05 000000023 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:09:15.499 -05 000000023 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:09:15.556 -05 000000068 INF: ===================Frame #1017=================== 15-12-21 22:09:15.577 -05 000000009 INF: ===================Frame #1019=================== 15-12-21 22:09:15.599 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:09:15.687 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:15.706 -05 000000068 INF: ===================Frame #1029=================== 15-12-21 22:09:15.712 -05 000000054 INF: ===================Delay 4 of 10 seconds left=================== 15-12-21 22:09:15.727 -05 000000009 INF: ===================Frame #1031=================== 15-12-21 22:09:15.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:15.787 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:15.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:15.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:15.856 -05 000000068 INF: ===================Frame #1041=================== 15-12-21 22:09:15.878 -05 000000009 INF: ===================Frame #1043=================== 15-12-21 22:09:15.879 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:09:15.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:15.953 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:15.953 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:16.006 -05 000000068 INF: ===================Frame #1053=================== 15-12-21 22:09:16.028 -05 000000009 INF: ===================Frame #1054=================== 15-12-21 22:09:16.060 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:16.077 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:16.077 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:16.129 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:09:16.156 -05 000000068 INF: ===================Frame #1065=================== 15-12-21 22:09:16.186 -05 000000023 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:09:16.186 -05 000000023 INF: ====================================== 15-12-21 22:09:16.297 -05 000000009 INF: ===================Frame #1076=================== 15-12-21 22:09:16.359 -05 000000068 INF: ===================Frame #1081=================== 15-12-21 22:09:16.509 -05 000000068 INF: ===================Frame #1092=================== 15-12-21 22:09:16.631 -05 000000009 INF: ===================Frame #1102=================== 15-12-21 22:09:16.712 -05 000000054 INF: ===================Delay 3 of 10 seconds left=================== 15-12-21 22:09:16.776 -05 000000068 INF: ===================Frame #1114=================== 15-12-21 22:09:16.808 -05 000000009 INF: ===================Frame #1116=================== 15-12-21 22:09:16.950 -05 000000068 INF: ===================Frame #1127=================== 15-12-21 22:09:16.971 -05 000000009 INF: ===================Frame #1129=================== 15-12-21 22:09:17.100 -05 000000068 INF: ===================Frame #1139=================== 15-12-21 22:09:17.121 -05 000000009 INF: ===================Frame #1141=================== 15-12-21 22:09:17.250 -05 000000068 INF: ===================Frame #1151=================== 15-12-21 22:09:17.271 -05 000000009 INF: ===================Frame #1153=================== 15-12-21 22:09:17.337 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:17.356 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:17.356 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:17.400 -05 000000068 INF: ===================Frame #1163=================== 15-12-21 22:09:17.421 -05 000000009 INF: ===================Frame #1165=================== 15-12-21 22:09:17.468 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:09:17.481 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 33.203C:A1\r\n 15-12-21 22:09:17.481 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:17.550 -05 000000068 INF: ===================Frame #1175=================== 15-12-21 22:09:17.571 -05 000000009 INF: ===================Frame #1176=================== 15-12-21 22:09:17.588 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:17.668 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:17.668 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:17.701 -05 000000068 INF: ===================Frame #1187=================== 15-12-21 22:09:17.712 -05 000000054 INF: ===================Delay 2 of 10 seconds left=================== 15-12-21 22:09:17.773 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:17.781 -05 000000009 INF: ===================Frame #1193=================== 15-12-21 22:09:17.792 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:17.792 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:17.852 -05 000000068 INF: ===================Frame #1199=================== 15-12-21 22:09:17.931 -05 000000009 INF: ===================Frame #1205=================== 15-12-21 22:09:18.002 -05 000000068 INF: ===================Frame #1211=================== 15-12-21 22:09:18.081 -05 000000009 INF: ===================Frame #1217=================== 15-12-21 22:09:18.153 -05 000000068 INF: ===================Frame #1222=================== 15-12-21 22:09:18.231 -05 000000009 INF: ===================Frame #1229=================== 15-12-21 22:09:18.382 -05 000000009 INF: ===================Frame #1241=================== 15-12-21 22:09:18.410 -05 000000068 INF: ===================Frame #1243=================== 15-12-21 22:09:18.433 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:09:18.480 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.986C:A1\r\n 15-12-21 22:09:18.480 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:18.533 -05 000000009 INF: ===================Frame #1250=================== 15-12-21 22:09:18.540 -05 000000056 INF: FPGA: Recv TDIYWAIT 15-12-21 22:09:18.541 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:09:18.547 -05 000000028 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:09:18.551 -05 000000025 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:09:18.551 -05 000000025 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:09:18.554 -05 000000025 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:09:18.554 -05 000000025 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:09:18.554 -05 000000025 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:09:18.554 -05 000000074 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:09:18.557 -05 000000074 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:09:18.557 -05 000000074 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:09:18.557 -05 000000074 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:09:18.559 -05 000000074 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:09:18.560 -05 000000068 INF: ===================Frame #1250=================== 15-12-21 22:09:18.613 -05 000000068 INF: Camera complete - got 1250 frames. 15-12-21 22:09:18.615 -05 000000068 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:09:18.647 -05 000000009 INF: Camera complete - got 1250 frames. 15-12-21 22:09:18.649 -05 000000009 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:09:18.712 -05 000000054 INF: ===================Delay 1 of 10 seconds left=================== 15-12-21 22:09:18.728 -05 000000087 INF: FPGA: Recv EX1MV 15-12-21 22:09:18.728 -05 000000025 INF: Excitation Filter 1: Moved 36 steps in 174.3414 ms 15-12-21 22:09:18.728 -05 000000025 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 174.4639 ms 15-12-21 22:09:18.728 -05 000000025 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 177.0062 ms 15-12-21 22:09:18.729 -05 000000025 INF: ====================================== 15-12-21 22:09:18.739 -05 000000068 INF: ===================Camera TDI=================== 15-12-21 22:09:18.763 -05 000000068 INF: ====================================== 15-12-21 22:09:18.854 -05 000000009 INF: ===================Camera TDI=================== 15-12-21 22:09:18.876 -05 000000009 INF: ====================================== 15-12-21 22:09:18.880 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 22:09:18.881 -05 000000090 INF: ====================================== 15-12-21 22:09:18.975 -05 000000033 INF: FPGA: Recv EX2MV 15-12-21 22:09:18.975 -05 000000074 INF: Excitation Filter 2: Moved 107 steps in 418.3902 ms 15-12-21 22:09:18.975 -05 000000074 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 418.4855 ms 15-12-21 22:09:18.975 -05 000000074 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 418.5873 ms 15-12-21 22:09:18.976 -05 000000074 INF: ====================================== 15-12-21 22:09:18.980 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:09:18.981 -05 000000028 INF: ====================================== 15-12-21 22:09:19.043 -05 000000045 INF: Y Motor: Moved to 9.0764 after 16709 ms 15-12-21 22:09:19.043 -05 000000045 INF: ====================================== 15-12-21 22:09:19.045 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:09:19.048 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:09:19.052 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.052 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:09:19.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:09:19.101 -05 000000056 INF: FPGA: Recv TDICLINES 8977 15-12-21 22:09:19.101 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:09:19.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:09:19.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:19.163 -05 000000090 INF: FPGA: Recv TDIYERD 907644 15-12-21 22:09:19.163 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:09:19.208 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:09:19.224 -05 000000028 INF: FPGA: Recv ZADCR 22367 15-12-21 22:09:19.224 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.085. Y moved -60.304 mm 15-12-21 22:09:19.224 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:09:19.226 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:19.226 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:19.289 -05 000000049 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:09:19.289 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:09:19.289 -05 000000057 INF: TDIScan finished after 21586.8112 ms 15-12-21 22:09:19.290 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:09:19.290 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:09:19.292 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.320 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.028 um 15-12-21 22:09:19.321 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.327 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.328 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:09:19.336 -05 000000025 INF: ===================Dither Clean Up Command=================== 15-12-21 22:09:19.338 -05 000000078 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:09:19.338 -05 000000009 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:09:19.341 -05 000000041 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:09:19.343 -05 000000078 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:09:19.343 -05 000000078 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:09:19.343 -05 000000009 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:09:19.343 -05 000000033 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:09:19.345 -05 000000055 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:09:19.345 -05 000000033 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:09:19.346 -05 000000055 INF: ===================LFT:Extracting coords=================== 15-12-21 22:09:19.353 -05 000000024 INF: FPGA: Recv ZSTEP 15-12-21 22:09:19.353 -05 000000024 INF: FPGA: Recv ZSEL 15-12-21 22:09:19.353 -05 000000033 INF: FPGA: Xmit ZDACW 28255\n 15-12-21 22:09:19.353 -05 000000078 INF: ====================================== 15-12-21 22:09:19.355 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:09:19.355 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:09:19.402 -05 000000055 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:09:19.403 -05 000000055 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:09:19.407 -05 000000065 INF: ===================LookupFocusTracking=================== 15-12-21 22:09:19.407 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:09:19.407 -05 000000043 INF: ===================LookupFocusTracking=================== 15-12-21 22:09:19.407 -05 000000065 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:09:19.408 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:09:19.408 -05 000000074 INF: ===================LookupFocusTracking=================== 15-12-21 22:09:19.408 -05 000000043 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:09:19.408 -05 000000074 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:09:19.413 -05 000000087 INF: FPGA: Recv ZDACW 15-12-21 22:09:19.413 -05 000000033 INF: ====================================== 15-12-21 22:09:19.414 -05 000000009 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:09:19.417 -05 000000041 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:09:19.417 -05 000000009 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:09:19.417 -05 000000009 INF: ====================================== 15-12-21 22:09:19.507 -05 000000041 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:09:19.508 -05 000000041 INF: ====================================== 15-12-21 22:09:19.608 -05 000000056 INF: LFT found best fwhm score 2.765932 in 157 ms 15-12-21 22:09:19.608 -05 000000056 INF: LFT found good score at index 8597 with fwhm value 2.765932. Next cycle, cycle 40 starting Z position for bottom surface is at -0.087 mm FC:A, C:39,L:2,B 15-12-21 22:09:19.608 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:09:19.609 -05 000000056 INF: ====================================== 15-12-21 22:09:19.614 -05 000000043 INF: LFT found best fwhm score 2.740025 in 160 ms 15-12-21 22:09:19.614 -05 000000043 INF: LFT found good score at index 7033 with fwhm value 2.740025. Next cycle, cycle 40 starting Z position for bottom surface is at -0.088 mm FC:A, C:39,L:2,B 15-12-21 22:09:19.615 -05 000000043 INF: ===================LookupFocusTracking=================== 15-12-21 22:09:19.615 -05 000000043 INF: ====================================== 15-12-21 22:09:19.644 -05 000000065 INF: LFT found best fwhm score 2.894257 in 190 ms 15-12-21 22:09:19.645 -05 000000065 INF: LFT found good score at index 1473 with fwhm value 2.894257. Next cycle, cycle 40 starting Z position for bottom surface is at -0.089 mm FC:A, C:39,L:2,B 15-12-21 22:09:19.645 -05 000000065 INF: ===================LookupFocusTracking=================== 15-12-21 22:09:19.646 -05 000000065 INF: ====================================== 15-12-21 22:09:19.649 -05 000000074 INF: LFT found best fwhm score 2.721774 in 197 ms 15-12-21 22:09:19.649 -05 000000074 INF: LFT found good score at index 6909 with fwhm value 2.721774. Next cycle, cycle 40 starting Z position for bottom surface is at -0.088 mm FC:A, C:39,L:2,B 15-12-21 22:09:19.649 -05 000000074 INF: ===================LookupFocusTracking=================== 15-12-21 22:09:19.650 -05 000000074 INF: ====================================== 15-12-21 22:09:19.654 -05 000000055 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:09:19.657 -05 000000055 INF: LFT weighted average best Z for bottom surface is at -0.088mm FC:A, C:39,L:2,B 15-12-21 22:09:19.658 -05 000000055 INF: ====================================== 15-12-21 22:09:19.662 -05 000000025 INF: ====================================== 15-12-21 22:09:19.665 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.668 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:09:19.668 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.669 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:09:19.669 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.669 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:09:19.669 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.669 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:09:19.669 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:09:19.669 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:09:19.670 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:09:19.671 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:09:19.673 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:09:19.673 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Waiting for image analysis, Delay 1 of 10 seconds left=================== 15-12-21 22:09:19.673 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation, Delay 1 of 10 seconds left=================== 15-12-21 22:09:19.674 -05 000000057 INF: Waited 3 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 3, buffer wait time 0 15-12-21 22:09:19.674 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:09:19.674 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:09:19.674 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:09:19.675 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:09:19.675 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:09:19.679 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging, Bottom Surface=================== 15-12-21 22:09:19.679 -05 000000076 INF: ===================Registering and Extracting C039 L002 T2201, Registering and Extracting C039 L002 T2202, Registering and Extracting C039 L002 T2203, Registering and Extracting C039 L002 T2204=================== 15-12-21 22:09:19.679 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:09:19.679 -05 000000089 INF: ===================Registering and Extracting C039 L002 T2201, Registering and Extracting C039 L002 T2202, Registering and Extracting C039 L002 T2203, Registering and Extracting C039 L002 T2204=================== 15-12-21 22:09:19.679 -05 000000075 INF: ===================Registering and Extracting C039 L002 T2201, Registering and Extracting C039 L002 T2202, Registering and Extracting C039 L002 T2203, Registering and Extracting C039 L002 T2204=================== 15-12-21 22:09:19.679 -05 000000011 INF: ===================Registering and Extracting C039 L002 T2201, Registering and Extracting C039 L002 T2202, Registering and Extracting C039 L002 T2203, Registering and Extracting C039 L002 T2204, Registering and Extracting C039 L002 T2205=================== 15-12-21 22:09:19.679 -05 000000060 INF: ===================Registering and Extracting C039 L002 T2201, Registering and Extracting C039 L002 T2202, Registering and Extracting C039 L002 T2203, Registering and Extracting C039 L002 T2204=================== 15-12-21 22:09:19.685 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:09:19.685 -05 000000038 INF: ===================Registering and Extracting C039 L002 T2201, Registering and Extracting C039 L002 T2202, Registering and Extracting C039 L002 T2203, Registering and Extracting C039 L002 T2204, Registering and Extracting C039 L002 T2205, Registering and Extracting C039 L002 T2206, Registering and Extracting C039 L002 T2207=================== 15-12-21 22:09:19.685 -05 000000066 INF: ===================Registering and Extracting C039 L002 T2201, Registering and Extracting C039 L002 T2202, Registering and Extracting C039 L002 T2203, Registering and Extracting C039 L002 T2204, Registering and Extracting C039 L002 T2205, Registering and Extracting C039 L002 T2206, Registering and Extracting C039 L002 T2207=================== 15-12-21 22:09:19.686 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:09:19.705 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39, Imaging=================== 15-12-21 22:09:19.707 -05 000000054 INF: ===================WaitCommand=================== 15-12-21 22:09:19.707 -05 000000054 INF: WaitCommand(10000) end 15-12-21 22:09:19.707 -05 000000077 INF: ===================Registering and Extracting C039 L002 T2201, Registering and Extracting C039 L002 T2202, Registering and Extracting C039 L002 T2203, Registering and Extracting C039 L002 T2204, Registering and Extracting C039 L002 T2205, Registering and Extracting C039 L002 T2206, Registering and Extracting C039 L002 T2207, Registering and Extracting C039 L002 T2208=================== 15-12-21 22:09:19.709 -05 000000054 INF: ====================================== 15-12-21 22:09:19.710 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:19.710 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #39=================== 15-12-21 22:09:19.711 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:19.712 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:09:19.712 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX)=================== 15-12-21 22:09:19.716 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Chemistry CompleteCycle=================== 15-12-21 22:09:19.716 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36=================== 15-12-21 22:09:19.941 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.942 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging, Waiting for imaging module...=================== 15-12-21 22:09:19.942 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.942 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging, Waiting for analysis...=================== 15-12-21 22:09:19.942 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.942 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging, Waiting for user to shut the door...=================== 15-12-21 22:09:19.942 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.943 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.943 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging, Waiting for imaging module...=================== 15-12-21 22:09:19.943 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.959 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging, Waiting for analysis...=================== 15-12-21 22:09:19.959 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.959 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging, Waiting for user to shut the door...=================== 15-12-21 22:09:19.960 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.960 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.961 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging=================== 15-12-21 22:09:19.961 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging, Top Surface=================== 15-12-21 22:09:19.962 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #36, Imaging, Top Surface=================== 15-12-21 22:09:19.962 -05 000000062 INF: Compensator: Moving IntoPath 15-12-21 22:09:19.962 -05 000000062 INF: FPGA: Xmit MIOCOMPF\n