15-12-21 22:34:50.352 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44=================== 15-12-21 22:34:50.353 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle=================== 15-12-21 22:34:50.354 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:50.354 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:50.355 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:50.355 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:50.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:34:50.456 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:34:50.456 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Selecting Reagent USB (5)=================== 15-12-21 22:34:50.457 -05 000000057 INF: Valve A2: Go to position 5 15-12-21 22:34:50.457 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:34:50.497 -05 000000068 INF: ===================WaitCommand=================== 15-12-21 22:34:50.498 -05 000000068 INF: WaitCommand(10000) end 15-12-21 22:34:50.498 -05 000000068 INF: ====================================== 15-12-21 22:34:50.514 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:34:50.515 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:34:50.516 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:34:50.516 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Chemistry CompleteCycle=================== 15-12-21 22:34:50.517 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40=================== 15-12-21 22:34:50.519 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 3\r 15-12-21 22:34:50.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:34:50.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:50.519 -05 000000057 INF: Valve A2: 207.369 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:34:50.519 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 3 to 5 15-12-21 22:34:50.519 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW5\r 15-12-21 22:34:50.520 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:34:50.520 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:34:50.594 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.596 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Waiting for imaging module...=================== 15-12-21 22:34:50.597 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.597 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Waiting for analysis...=================== 15-12-21 22:34:50.597 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.597 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Waiting for user to shut the door...=================== 15-12-21 22:34:50.597 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.597 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.598 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Waiting for imaging module...=================== 15-12-21 22:34:50.598 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.598 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Waiting for analysis...=================== 15-12-21 22:34:50.598 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.598 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Waiting for user to shut the door...=================== 15-12-21 22:34:50.611 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.612 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.613 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:34:50.623 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface=================== 15-12-21 22:34:50.624 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface=================== 15-12-21 22:34:50.624 -05 000000062 INF: Compensator: Moving IntoPath 15-12-21 22:34:50.624 -05 000000062 INF: FPGA: Xmit MIOCOMPF\n 15-12-21 22:34:50.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:34:50.724 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:50.724 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:50.861 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:34:50.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:50.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:50.987 -05 000000056 INF: FPGA: Recv MIOCOMPF 15-12-21 22:34:50.988 -05 000000062 INF: Compensator: Moved IntoPath in 363 ms 15-12-21 22:34:51.000 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface=================== 15-12-21 22:34:51.002 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface=================== 15-12-21 22:34:51.008 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Aligning=================== 15-12-21 22:34:51.009 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Aligning=================== 15-12-21 22:34:51.020 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Aligning=================== 15-12-21 22:34:51.021 -05 000000022 INF: ===================Move Tilt Motor 1=================== 15-12-21 22:34:51.021 -05 000000029 INF: ===================Move Tilt Motor 2=================== 15-12-21 22:34:51.021 -05 000000049 INF: ===================Move Tilt Motor 3=================== 15-12-21 22:34:51.021 -05 000000022 INF: Tilt Motor 1: Moving to 5.3599 mm, started at 5.5245 mm, delta = -0.1646 mm 15-12-21 22:34:51.021 -05 000000022 INF: FPGA: Xmit T1RD\n 15-12-21 22:34:51.021 -05 000000049 INF: Tilt Motor 3: Moving to 5.5758 mm, started at 5.4102 mm, delta = 0.1656 mm 15-12-21 22:34:51.022 -05 000000029 INF: Tilt Motor 2: Moving to 5.5090 mm, started at 5.3751 mm, delta = 0.1339 mm 15-12-21 22:34:51.072 -05 000000049 INF: FPGA: Xmit T3RD\n 15-12-21 22:34:51.074 -05 000000029 INF: FPGA: Xmit T2RD\n 15-12-21 22:34:51.076 -05 000000095 INF: FPGA: Recv T1RD 21750 15-12-21 22:34:51.076 -05 000000022 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 22:34:51.076 -05 000000022 INF: Tilt Motor 1: Moving to 21102 encoder counts 15-12-21 22:34:51.076 -05 000000022 INF: FPGA: Xmit T1MOVETO 21102\n 15-12-21 22:34:51.129 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 22:34:51.129 -05 000000085 INF: FPGA: Recv T3RD 21298 15-12-21 22:34:51.129 -05 000000085 INF: FPGA: Recv T2RD 21162 15-12-21 22:34:51.129 -05 000000049 INF: Tilt Motor 3: Encoder: at motor step 3549 + 4/6 15-12-21 22:34:51.129 -05 000000049 INF: Tilt Motor 3: Moving to 21952 encoder counts 15-12-21 22:34:51.129 -05 000000029 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 22:34:51.129 -05 000000029 INF: Tilt Motor 2: Moving to 21689 encoder counts 15-12-21 22:34:51.129 -05 000000049 INF: FPGA: Xmit T3MOVETO 21952\n 15-12-21 22:34:51.129 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:51.129 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:34:51.129 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:34:51.131 -05 000000029 INF: FPGA: Xmit T2MOVETO 21689\n 15-12-21 22:34:51.192 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:34:51.192 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:51.314 -05 000000085 INF: FPGA: Recv T1MOVETO 107 15-12-21 22:34:51.315 -05 000000022 INF: Tilt Motor 1: To move from 5.525 to 5.360 (-0.165 mm) should take 108 steps, but required 107 steps (0.163 mm). Slippage = -0.002 mm (0.01%) 15-12-21 22:34:51.315 -05 000000022 INF: FPGA: Xmit T1RD\n 15-12-21 22:34:51.339 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:34:51.377 -05 000000074 INF: FPGA: Recv T1RD 21108 15-12-21 22:34:51.377 -05 000000074 INF: FPGA: Recv T2MOVETO 87 15-12-21 22:34:51.377 -05 000000074 INF: FPGA: Recv T3MOVETO 108 15-12-21 22:34:51.377 -05 000000049 INF: Tilt Motor 3: To move from 5.410 to 5.576 (0.166 mm) should take 109 steps, but required 108 steps (0.165 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 22:34:51.377 -05 000000049 INF: FPGA: Xmit T3RD\n 15-12-21 22:34:51.377 -05 000000029 INF: Tilt Motor 2: To move from 5.375 to 5.509 (0.134 mm) should take 88 steps, but required 87 steps (0.133 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 22:34:51.378 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:34:51.378 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:51.378 -05 000000022 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 22:34:51.379 -05 000000022 INF: FPGA: Xmit T1RD\n 15-12-21 22:34:51.381 -05 000000029 INF: FPGA: Xmit T2RD\n 15-12-21 22:34:51.439 -05 000000055 INF: FPGA: Recv T3RD 21946 15-12-21 22:34:51.439 -05 000000055 INF: FPGA: Recv T1RD 21108 15-12-21 22:34:51.439 -05 000000055 INF: FPGA: Recv T2RD 21683 15-12-21 22:34:51.439 -05 000000022 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 22:34:51.439 -05 000000022 INF: FPGA: Xmit T1RD\n 15-12-21 22:34:51.439 -05 000000029 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 22:34:51.439 -05 000000049 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 22:34:51.441 -05 000000049 INF: FPGA: Xmit T3RD\n 15-12-21 22:34:51.466 -05 000000029 INF: FPGA: Xmit T2RD\n 15-12-21 22:34:51.503 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:34:51.506 -05 000000085 INF: FPGA: Recv T1RD 21108 15-12-21 22:34:51.506 -05 000000085 INF: FPGA: Recv T3RD 21946 15-12-21 22:34:51.506 -05 000000085 INF: FPGA: Recv T2RD 21683 15-12-21 22:34:51.506 -05 000000049 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 22:34:51.506 -05 000000049 INF: FPGA: Xmit T3RD\n 15-12-21 22:34:51.506 -05 000000022 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 22:34:51.506 -05 000000022 INF: Tilt Motor 1: After move to 5.3599, error = 0.0015, min/max error = -0.0015/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:34:51.506 -05 000000022 INF: Tilt Motor 1: Moved to 5.3614 after 484.6226 ms 15-12-21 22:34:51.506 -05 000000029 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 22:34:51.507 -05 000000022 INF: ====================================== 15-12-21 22:34:51.507 -05 000000029 INF: FPGA: Xmit T2RD\n 15-12-21 22:34:51.562 -05 000000074 INF: FPGA: Recv T3RD 21946 15-12-21 22:34:51.562 -05 000000074 INF: FPGA: Recv T2RD 21683 15-12-21 22:34:51.562 -05 000000029 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 22:34:51.562 -05 000000029 INF: Tilt Motor 2: After move to 5.5090, error = -0.0015, min/max error = -0.0015/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:34:51.563 -05 000000049 INF: Tilt Motor 3: Encoder: at motor step 3657 + 4/6 15-12-21 22:34:51.563 -05 000000049 INF: Tilt Motor 3: After move to 5.5758, error = -0.0015, min/max error = -0.0015/0.0009, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:34:51.563 -05 000000049 INF: Tilt Motor 3: Moved to 5.5743 after 541.2546 ms 15-12-21 22:34:51.563 -05 000000029 INF: Tilt Motor 2: Moved to 5.5075 after 541.0181 ms 15-12-21 22:34:51.564 -05 000000049 INF: ====================================== 15-12-21 22:34:51.564 -05 000000029 INF: ====================================== 15-12-21 22:34:51.566 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:34:51.566 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:51.613 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Aligning=================== 15-12-21 22:34:51.632 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Aligning=================== 15-12-21 22:34:51.680 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface=================== 15-12-21 22:34:51.680 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface=================== 15-12-21 22:34:51.768 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:34:51.769 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:34:51.777 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:34:51.782 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:34:51.783 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:34:51.784 -05 000000062 INF: Compensator: Remaining IntoPath 15-12-21 22:34:51.797 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:34:51.802 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:34:51.944 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:34:51.945 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:34:52.009 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:52.037 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 22:34:52.038 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:52.045 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:34:52.045 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:34:52.046 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:34:52.046 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -108.1 um, section = A_1 15-12-21 22:34:52.049 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:34:52.050 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:34:52.051 -05 000000022 INF: ===================MoveEmissionFilters=================== 15-12-21 22:34:52.051 -05 000000068 INF: ===================Move X,Y=================== 15-12-21 22:34:52.052 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:34:52.053 -05 000000056 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:34:52.053 -05 000000024 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:34:52.053 -05 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:34:52.053 -05 000000068 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:34:52.053 -05 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:34:52.053 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:34:52.053 -05 000000090 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:34:52.059 -05 000000090 INF: Z Motor: Moving to -0.1700 mm, started at -0.1081 mm 15-12-21 22:34:52.059 -05 000000090 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:34:52.063 -05 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:34:52.063 -05 000000095 INF: ===================Move X Motor without settling=================== 15-12-21 22:34:52.063 -05 000000056 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:34:52.063 -05 000000049 INF: ===================Move Y Motor without settling=================== 15-12-21 22:34:52.064 -05 000000024 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:34:52.064 -05 000000049 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:34:52.064 -05 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:34:52.064 -05 000000049 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:34:52.065 -05 000000063 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:34:52.065 -05 000000080 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:34:52.065 -05 000000049 INF: Y Motor: Xmit 1G\n 15-12-21 22:34:52.066 -05 000000055 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:34:52.066 -05 000000028 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:34:52.066 -05 000000063 INF: ====================================== 15-12-21 22:34:52.066 -05 000000029 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:34:52.066 -05 000000055 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:34:52.067 -05 000000095 INF: X Motor: Xmit PR VM\n 15-12-21 22:34:52.067 -05 000000029 INF: ====================================== 15-12-21 22:34:52.067 -05 000000055 INF: ====================================== 15-12-21 22:34:52.069 -05 000000028 INF: ====================================== 15-12-21 22:34:52.069 -05 000000080 INF: ====================================== 15-12-21 22:34:52.069 -05 000000063 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:34:52.075 -05 000000056 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:34:52.075 -05 000000063 INF: ====================================== 15-12-21 22:34:52.076 -05 000000029 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:34:52.076 -05 000000055 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:34:52.076 -05 000000024 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:34:52.077 -05 000000029 INF: ====================================== 15-12-21 22:34:52.077 -05 000000056 INF: ====================================== 15-12-21 22:34:52.077 -05 000000055 INF: ====================================== 15-12-21 22:34:52.078 -05 000000074 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:34:52.079 -05 000000024 INF: ====================================== 15-12-21 22:34:52.080 -05 000000074 INF: ====================================== 15-12-21 22:34:52.080 -05 000000085 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:34:52.114 -05 000000085 INF: ====================================== 15-12-21 22:34:52.128 -05 000000028 INF: FPGA: Recv ZTRG 15-12-21 22:34:52.128 -05 000000090 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:34:52.147 -05 000000049 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:34:52.147 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:34:52.147 -05 000000022 INF: ====================================== 15-12-21 22:34:52.148 -05 000000095 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:34:52.148 -05 000000095 INF: X Motor: Xmit PR VI\n 15-12-21 22:34:52.148 -05 000000049 INF: Y Motor: Recv 1G\r\n 15-12-21 22:34:52.149 -05 000000049 INF: Y Motor: Xmit 1D\n 15-12-21 22:34:52.206 -05 000000063 INF: FPGA: Recv ZYT 15-12-21 22:34:52.206 -05 000000090 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:34:52.206 -05 000000090 INF: FPGA: Xmit ZMV 44563\n 15-12-21 22:34:52.209 -05 000000049 INF: Y Motor: Recv 1D\r\n 15-12-21 22:34:52.210 -05 000000095 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:34:52.210 -05 000000095 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:34:52.210 -05 000000095 INF: X Motor: Moving to 75.9620 mm @15.000 mm/sec, started at 17.9380 mm 15-12-21 22:34:52.210 -05 000000049 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:34:52.213 -05 000000095 INF: X Motor: Xmit MA 6948\n 15-12-21 22:34:52.216 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:34:52.216 -05 000000049 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:34:52.247 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:34:52.269 -05 000000056 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 22:34:52.269 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 22:34:52.274 -05 000000095 INF: X Motor: Recv MA 6948\r\n> 15-12-21 22:34:52.277 -05 000000095 INF: X Motor: WaitUntilStopped 63868 15-12-21 22:34:52.319 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:34:52.329 -05 000000055 INF: FPGA: Recv ZMV 15-12-21 22:34:52.329 -05 000000090 INF: Z Motor: MoveAndTrigger 'ZMV' command took 123.4029 ms 15-12-21 22:34:52.329 -05 000000090 INF: FPGA: Xmit ZDACR\n 15-12-21 22:34:52.330 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:34:52.330 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 22:34:52.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:34:52.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:52.331 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:34:52.390 -05 000000085 INF: FPGA: Recv ZDACR 44563 15-12-21 22:34:52.391 -05 000000090 INF: Z Motor: MoveAndTrigger took 332.8082 ms w/comms 15-12-21 22:34:52.391 -05 000000090 INF: Z Motor: After move to -0.1700, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:34:52.391 -05 000000090 INF: Z Motor: MoveAbsStepped took 332.9198 ms 15-12-21 22:34:52.395 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:34:52.397 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:34:52.406 -05 000000074 INF: ===================Camera Arm TDI=================== 15-12-21 22:34:52.407 -05 000000055 INF: ===================TDI Scan Setup=================== 15-12-21 22:34:52.414 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:34:52.415 -05 000000055 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:34:52.416 -05 000000055 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:34:52.416 -05 000000055 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:34:52.430 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P7680R\r 15-12-21 22:34:52.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:34:52.454 -05 000000056 INF: FPGA: Recv ZSEL 15-12-21 22:34:52.455 -05 000000055 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:34:52.456 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:34:52.466 -05 000000055 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:34:52.466 -05 000000055 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:34:52.466 -05 000000055 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:34:52.517 -05 000000028 INF: FPGA: Recv ZSTEP 15-12-21 22:34:52.518 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:52.518 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:34:52.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:52.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:52.531 -05 000000055 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:34:52.532 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:34:52.536 -05 000000055 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:34:52.536 -05 000000055 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:34:52.536 -05 000000055 INF: Z Motor: Arming to move to -0.1300 mm 15-12-21 22:34:52.536 -05 000000055 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:34:52.577 -05 000000022 INF: FPGA: Recv ZYT 15-12-21 22:34:52.577 -05 000000055 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1005267 enc / 10.053 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:34:52.577 -05 000000055 INF: FPGA: Xmit ZARM 34078\n 15-12-21 22:34:52.618 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:52.625 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:34:52.639 -05 000000063 INF: FPGA: Recv ZARM 15-12-21 22:34:52.639 -05 000000055 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.1621 ms 15-12-21 22:34:52.640 -05 000000055 INF: Z Motor: ArmAbsStepped took 103.5679 ms 15-12-21 22:34:52.641 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 30.653C:A1\r\n 15-12-21 22:34:52.641 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:52.641 -05 000000055 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:34:52.647 -05 000000055 INF: ===================TDI Scan Setup=================== 15-12-21 22:34:52.650 -05 000000055 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:34:52.653 -05 000000055 INF: ===================TDI Scan Setup=================== 15-12-21 22:34:52.663 -05 000000055 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:34:52.664 -05 000000055 INF: ===================TDI Scan Setup=================== 15-12-21 22:34:52.667 -05 000000055 INF: ====================================== 15-12-21 22:34:52.705 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:52.748 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:34:52.771 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:52.771 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:52.955 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:53.015 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:53.189 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:34:53.264 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.977C:A1\r\n 15-12-21 22:34:53.264 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:53.298 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:53.370 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:53.620 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:53.669 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:53.775 -05 000000071 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:53.848 -05 000000011 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207, Registering and Extracting C043 L002 T2209=================== 15-12-21 22:34:53.872 -05 000000074 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:34:53.872 -05 000000074 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:34:53.873 -05 000000074 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:34:53.920 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:53.988 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:54.056 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:34:54.069 -05 000000058 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:54.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:34:54.078 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:54.166 -05 000000066 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207, Registering and Extracting C043 L002 T2210=================== 15-12-21 22:34:54.198 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:34:54.238 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:54.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:54.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:54.396 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:54.430 -05 000000094 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:54.469 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:34:54.504 -05 000000038 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207, Registering and Extracting C043 L002 T2211=================== 15-12-21 22:34:54.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:54.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:54.646 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:54.704 -05 000000075 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:54.704 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:34:54.704 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 22:34:54.804 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:34:54.804 -05 000000077 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207, Registering and Extracting C043 L002 T2212=================== 15-12-21 22:34:54.875 -05 000000065 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:54.886 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 22:34:54.886 -05 000000057 INF: Current Position of Pump is: 7680 15-12-21 22:34:54.886 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:34:54.904 -05 000000040 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207, Registering and Extracting C043 L002 T2213=================== 15-12-21 22:34:54.959 -05 000000060 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:54.986 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:34:55.049 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:55.051 -05 000000051 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207, Registering and Extracting C043 L002 T2214=================== 15-12-21 22:34:55.150 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:55.229 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:55.288 -05 000000009 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:55.299 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:34:55.351 -05 000000027 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207, Registering and Extracting C043 L002 T2215=================== 15-12-21 22:34:55.355 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:34:55.355 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:55.451 -05 000000074 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:34:55.451 -05 000000074 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:34:55.451 -05 000000074 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:34:55.453 -05 000000074 INF: ====================================== 15-12-21 22:34:55.455 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:34:55.503 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:55.524 -05 000000090 INF: ====================================== 15-12-21 22:34:55.570 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:34:55.571 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:55.572 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:34:55.574 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:34:55.654 -05 000000089 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:55.665 -05 000000048 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207, Registering and Extracting C043 L002 T2216=================== 15-12-21 22:34:55.725 -05 000000049 INF: Y Motor: Moved to 70.6885 after 3494 ms 15-12-21 22:34:55.789 -05 000000049 INF: ====================================== 15-12-21 22:34:56.081 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:34:56.091 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:34:56.091 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:56.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:34:56.291 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:34:56.291 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:56.395 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:34:56.419 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:34:56.419 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:56.560 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:34:56.562 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:56.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:56.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:56.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:34:56.567 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:34:56.567 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°, FC temperature to 60°=================== 15-12-21 22:34:56.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:56.671 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:56.790 -05 000000095 INF: X Motor: Xmit PR ER\n 15-12-21 22:34:56.810 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:60.00\r 15-12-21 22:34:56.871 -05 000000095 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:34:56.927 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:34:56.927 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:56.927 -05 000000095 INF: X Motor: Moved to 75.9653 after 4653 ms 15-12-21 22:34:56.929 -05 000000095 INF: ====================================== 15-12-21 22:34:56.933 -05 000000068 INF: ===================Move X,Y=================== 15-12-21 22:34:56.934 -05 000000068 INF: ====================================== 15-12-21 22:34:56.943 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:34:56.944 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:34:56.944 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:34:57.041 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:34:57.042 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:34:57.063 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:34:57.088 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:57.088 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:57.127 -05 000000024 INF: FPGA: Recv ZFREQCL 15-12-21 22:34:57.128 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:34:57.128 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:34:57.129 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:34:57.188 -05 000000049 INF: FPGA: Recv TDIYERD 7068852 15-12-21 22:34:57.188 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068852 counts (70.689 mm) 15-12-21 22:34:57.189 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:34:57.191 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:34:57.196 -05 000000068 INF: ===================TDI FPGA Arm=================== 15-12-21 22:34:57.197 -05 000000063 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:34:57.198 -05 000000063 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:34:57.203 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:34:57.207 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:0:1\r 15-12-21 22:34:57.219 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:34:57.220 -05 000000068 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:34:57.243 -05 000000095 INF: FPGA: Recv TDIYPOS 15-12-21 22:34:57.245 -05 000000063 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:34:57.245 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:34:57.246 -05 000000063 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:34:57.247 -05 000000063 INF: ====================================== 15-12-21 22:34:57.253 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:34:57.254 -05 000000068 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:34:57.359 -05 000000063 INF: FPGA: Recv TDIYARM3 15-12-21 22:34:57.360 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:34:57.361 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:34:57.361 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:57.364 -05 000000068 INF: ===================TDI FPGA Arm=================== 15-12-21 22:34:57.367 -05 000000068 INF: ====================================== 15-12-21 22:34:57.369 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:34:57.370 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:34:57.370 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:34:57.371 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:34:57.372 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:34:57.374 -05 000000056 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:34:57.374 -05 000000056 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:34:57.374 -05 000000056 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:34:57.374 -05 000000056 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:34:57.374 -05 000000056 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:34:57.375 -05 000000080 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:34:57.375 -05 000000080 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:34:57.375 -05 000000080 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:34:57.375 -05 000000080 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:34:57.397 -05 000000080 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:34:57.516 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:34:57.516 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:34:57.518 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:34:57.518 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:34:57.520 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:57.525 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:57.529 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:34:57.533 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:57.537 -05 000000049 INF: FPGA: Recv EX1MV 15-12-21 22:34:57.537 -05 000000056 INF: Excitation Filter 1: Moved -36 steps in 162.8524 ms 15-12-21 22:34:57.537 -05 000000056 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 162.9783 ms 15-12-21 22:34:57.537 -05 000000056 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 163.1423 ms 15-12-21 22:34:57.538 -05 000000056 INF: ====================================== 15-12-21 22:34:57.621 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:34:57.622 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Selecting Reagent CRM (7)=================== 15-12-21 22:34:57.622 -05 000000057 INF: Valve A2: Go to position 7 15-12-21 22:34:57.622 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:34:57.679 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 22:34:57.679 -05 000000057 INF: Valve A2: 7.160 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:34:57.679 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 5 to 7 15-12-21 22:34:57.679 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW7\r 15-12-21 22:34:57.680 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:34:57.680 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:34:57.749 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:34:57.803 -05 000000090 INF: FPGA: Recv EX2MV 15-12-21 22:34:57.803 -05 000000080 INF: Excitation Filter 2: Moved -107 steps in 427.5816 ms 15-12-21 22:34:57.803 -05 000000080 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 427.7057 ms 15-12-21 22:34:57.803 -05 000000080 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 427.7977 ms 15-12-21 22:34:57.804 -05 000000080 INF: ====================================== 15-12-21 22:34:57.805 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 27.942C:A1\r\n 15-12-21 22:34:57.805 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:57.806 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:34:57.851 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:34:57.856 -05 000000081 INF: ===================Camera TDI=================== 15-12-21 22:34:57.857 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:34:57.857 -05 000000056 INF: ===================FPGA Z Wait=================== 15-12-21 22:34:57.857 -05 000000055 INF: ===================Move Y Motor without settling=================== 15-12-21 22:34:57.857 -05 000000055 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:34:57.858 -05 000000056 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:34:57.858 -05 000000055 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:34:57.872 -05 000000081 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:34:57.878 -05 000000055 INF: Y Motor: Xmit 1G\n 15-12-21 22:34:57.880 -05 000000049 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:34:57.880 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:34:57.881 -05 000000049 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:34:57.881 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 22:34:57.938 -05 000000055 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:34:57.939 -05 000000055 INF: Y Motor: Recv 1G\r\n 15-12-21 22:34:57.940 -05 000000055 INF: Y Motor: Xmit 1D\n 15-12-21 22:34:58.011 -05 000000055 INF: Y Motor: Recv 1D\r\n 15-12-21 22:34:58.012 -05 000000055 INF: Y Motor: Recv *407662\r\n 15-12-21 22:34:58.013 -05 000000055 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:34:58.192 -05 000000028 INF: FPGA: Recv ZWAIT 15-12-21 22:34:58.193 -05 000000056 INF: ====================================== 15-12-21 22:34:58.255 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 7\r 15-12-21 22:34:58.255 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:58.255 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:34:58.333 -05 000000011 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206, Registering and Extracting C043 L002 T2207=================== 15-12-21 22:34:58.361 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:34:58.372 -05 000000080 INF: ===================Frame #4=================== 15-12-21 22:34:58.373 -05 000000090 INF: ===================Frame #4=================== 15-12-21 22:34:58.386 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:34:58.386 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:58.495 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:34:58.507 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:34:58.507 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:58.544 -05 000000080 INF: ===================Frame #18=================== 15-12-21 22:34:58.546 -05 000000090 INF: ===================Frame #18=================== 15-12-21 22:34:58.618 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:34:58.694 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 21.814C:A1\r\n 15-12-21 22:34:58.694 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:58.771 -05 000000080 INF: ===================Frame #35=================== 15-12-21 22:34:58.772 -05 000000090 INF: ===================Frame #36=================== 15-12-21 22:34:58.804 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:34:58.880 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:34:58.880 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:58.923 -05 000000080 INF: ===================Frame #47=================== 15-12-21 22:34:58.971 -05 000000090 INF: ===================Frame #51=================== 15-12-21 22:34:58.988 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:34:59.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:59.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:59.073 -05 000000080 INF: ===================Frame #59=================== 15-12-21 22:34:59.110 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:34:59.121 -05 000000090 INF: ===================Frame #63=================== 15-12-21 22:34:59.132 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:34:59.132 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:59.227 -05 000000080 INF: ===================Frame #71=================== 15-12-21 22:34:59.247 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:34:59.248 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:34:59.248 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 22:34:59.248 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:59.272 -05 000000090 INF: ===================Frame #75=================== 15-12-21 22:34:59.317 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:34:59.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:34:59.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:34:59.331 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 7, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:34:59.336 -05 000000066 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205, Registering and Extracting C043 L002 T2206=================== 15-12-21 22:34:59.377 -05 000000080 INF: ===================Frame #83=================== 15-12-21 22:34:59.417 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:34:59.423 -05 000000090 INF: ===================Frame #87=================== 15-12-21 22:34:59.503 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 22:34:59.503 -05 000000057 INF: Current Position of Pump is: 7680 15-12-21 22:34:59.503 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7), Aspirating port PortB=================== 15-12-21 22:34:59.528 -05 000000080 INF: ===================Frame #95=================== 15-12-21 22:34:59.573 -05 000000090 INF: ===================Frame #99=================== 15-12-21 22:34:59.603 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P21120R\r 15-12-21 22:34:59.679 -05 000000080 INF: ===================Frame #107=================== 15-12-21 22:34:59.708 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:59.725 -05 000000090 INF: ===================Frame #111=================== 15-12-21 22:34:59.761 -05 000000038 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204, Registering and Extracting C043 L002 T2205=================== 15-12-21 22:34:59.808 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:34:59.835 -05 000000080 INF: ===================Frame #119=================== 15-12-21 22:34:59.875 -05 000000090 INF: ===================Frame #123=================== 15-12-21 22:34:59.893 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:34:59.986 -05 000000080 INF: ===================Frame #131=================== 15-12-21 22:35:00.026 -05 000000090 INF: ===================Frame #135=================== 15-12-21 22:35:00.052 -05 000000051 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203, Registering and Extracting C043 L002 T2204=================== 15-12-21 22:35:00.072 -05 000000040 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202, Registering and Extracting C043 L002 T2203=================== 15-12-21 22:35:00.136 -05 000000080 INF: ===================Frame #143=================== 15-12-21 22:35:00.143 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:00.176 -05 000000090 INF: ===================Frame #147=================== 15-12-21 22:35:00.204 -05 000000077 INF: ===================Registering and Extracting C043 L002 T2201, Registering and Extracting C043 L002 T2202=================== 15-12-21 22:35:00.205 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:00.205 -05 000000027 INF: ===================Registering and Extracting C043 L002 T2201=================== 15-12-21 22:35:00.286 -05 000000080 INF: ===================Frame #155=================== 15-12-21 22:35:00.326 -05 000000090 INF: ===================Frame #158=================== 15-12-21 22:35:00.437 -05 000000080 INF: ===================Frame #167=================== 15-12-21 22:35:00.455 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:00.519 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:00.560 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:00.582 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:00.582 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:00.588 -05 000000080 INF: ===================Frame #179=================== 15-12-21 22:35:00.604 -05 000000090 INF: ===================Frame #180=================== 15-12-21 22:35:00.685 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:00.706 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:35:00.706 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:00.739 -05 000000080 INF: ===================Frame #191=================== 15-12-21 22:35:00.769 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:00.778 -05 000000090 INF: ===================Frame #194=================== 15-12-21 22:35:00.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:00.831 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:00.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:00.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:00.888 -05 000000048 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:35:00.889 -05 000000080 INF: ===================Frame #203=================== 15-12-21 22:35:00.938 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:00.946 -05 000000090 INF: ===================Frame #207=================== 15-12-21 22:35:00.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:00.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:00.980 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:35:00.986 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:35:01.039 -05 000000080 INF: ===================Frame #215=================== 15-12-21 22:35:01.081 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:01.096 -05 000000090 INF: ===================Frame #219=================== 15-12-21 22:35:01.123 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:35:01.128 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:35:01.143 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:01.190 -05 000000080 INF: ===================Frame #227=================== 15-12-21 22:35:01.247 -05 000000090 INF: ===================Frame #231=================== 15-12-21 22:35:01.253 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:35:01.258 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:35:01.340 -05 000000080 INF: ===================Frame #239=================== 15-12-21 22:35:01.363 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:35:01.371 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:35:01.393 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:01.398 -05 000000090 INF: ===================Frame #243=================== 15-12-21 22:35:01.453 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:01.466 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:35:01.494 -05 000000080 INF: ===================Frame #251=================== 15-12-21 22:35:01.549 -05 000000090 INF: ===================Frame #255=================== 15-12-21 22:35:01.644 -05 000000080 INF: ===================Frame #263=================== 15-12-21 22:35:01.699 -05 000000090 INF: ===================Frame #267=================== 15-12-21 22:35:01.705 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:01.765 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:01.795 -05 000000080 INF: ===================Frame #275=================== 15-12-21 22:35:01.850 -05 000000090 INF: ===================Frame #279=================== 15-12-21 22:35:01.946 -05 000000080 INF: ===================Frame #287=================== 15-12-21 22:35:02.002 -05 000000090 INF: ===================Frame #291=================== 15-12-21 22:35:02.015 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:02.077 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:02.096 -05 000000080 INF: ===================Frame #298=================== 15-12-21 22:35:02.153 -05 000000090 INF: ===================Frame #303=================== 15-12-21 22:35:02.182 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:02.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:02.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:02.304 -05 000000090 INF: ===================Frame #315=================== 15-12-21 22:35:02.310 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:02.327 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:02.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:02.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:02.389 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:02.442 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:02.455 -05 000000090 INF: ===================Frame #327=================== 15-12-21 22:35:02.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:02.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:02.606 -05 000000090 INF: ===================Frame #339=================== 15-12-21 22:35:02.639 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:02.701 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:02.743 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:35:02.756 -05 000000090 INF: ===================Frame #351=================== 15-12-21 22:35:02.856 -05 000000080 INF: ===================Frame #358=================== 15-12-21 22:35:02.907 -05 000000090 INF: ===================Frame #362=================== 15-12-21 22:35:02.951 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:03.009 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:03.014 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:03.077 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 25.355C:A1\r\n 15-12-21 22:35:03.077 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:03.118 -05 000000080 INF: ===================Frame #379=================== 15-12-21 22:35:03.264 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:03.268 -05 000000080 INF: ===================Frame #391=================== 15-12-21 22:35:03.325 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:03.346 -05 000000090 INF: ===================Frame #397=================== 15-12-21 22:35:03.419 -05 000000080 INF: ===================Frame #403=================== 15-12-21 22:35:03.496 -05 000000090 INF: ===================Frame #409=================== 15-12-21 22:35:03.569 -05 000000080 INF: ===================Frame #415=================== 15-12-21 22:35:03.577 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:03.638 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:03.646 -05 000000090 INF: ===================Frame #421=================== 15-12-21 22:35:03.720 -05 000000080 INF: ===================Frame #427=================== 15-12-21 22:35:03.798 -05 000000090 INF: ===================Frame #433=================== 15-12-21 22:35:03.810 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:03.827 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:03.827 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:03.870 -05 000000080 INF: ===================Frame #439=================== 15-12-21 22:35:03.888 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:03.933 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:03.949 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:03.951 -05 000000090 INF: ===================Frame #445=================== 15-12-21 22:35:03.952 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 30.201C:A1\r\n 15-12-21 22:35:03.952 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:04.021 -05 000000080 INF: ===================Frame #451=================== 15-12-21 22:35:04.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:04.076 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:04.076 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:04.104 -05 000000090 INF: ===================Frame #457=================== 15-12-21 22:35:04.171 -05 000000080 INF: ===================Frame #462=================== 15-12-21 22:35:04.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:04.201 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:04.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:04.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:04.256 -05 000000090 INF: ===================Frame #469=================== 15-12-21 22:35:04.261 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:04.408 -05 000000090 INF: ===================Frame #481=================== 15-12-21 22:35:04.430 -05 000000080 INF: ===================Frame #483=================== 15-12-21 22:35:04.511 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:04.559 -05 000000090 INF: ===================Frame #493=================== 15-12-21 22:35:04.573 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:04.580 -05 000000080 INF: ===================Frame #495=================== 15-12-21 22:35:04.710 -05 000000090 INF: ===================Frame #505=================== 15-12-21 22:35:04.730 -05 000000080 INF: ===================Frame #507=================== 15-12-21 22:35:04.823 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:04.860 -05 000000090 INF: ===================Frame #517=================== 15-12-21 22:35:04.880 -05 000000080 INF: ===================Frame #518=================== 15-12-21 22:35:04.889 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:05.010 -05 000000090 INF: ===================Frame #529=================== 15-12-21 22:35:05.129 -05 000000080 INF: ===================Frame #538=================== 15-12-21 22:35:05.140 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:05.160 -05 000000090 INF: ===================Frame #541=================== 15-12-21 22:35:05.198 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:05.311 -05 000000090 INF: ===================Frame #553=================== 15-12-21 22:35:05.314 -05 000000080 INF: ===================Frame #553=================== 15-12-21 22:35:05.431 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:05.448 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:05.448 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:05.448 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:05.462 -05 000000090 INF: ===================Frame #564=================== 15-12-21 22:35:05.464 -05 000000080 INF: ===================Frame #565=================== 15-12-21 22:35:05.509 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:05.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:05.615 -05 000000080 INF: ===================Frame #576=================== 15-12-21 22:35:05.636 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:05.636 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:05.735 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:05.759 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:05.761 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:05.761 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:05.822 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:05.848 -05 000000080 INF: ===================Frame #595=================== 15-12-21 22:35:05.863 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:05.874 -05 000000090 INF: ===================Frame #597=================== 15-12-21 22:35:05.884 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:35:05.884 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:05.999 -05 000000080 INF: ===================Frame #607=================== 15-12-21 22:35:06.024 -05 000000090 INF: ===================Frame #609=================== 15-12-21 22:35:06.074 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:06.133 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:06.150 -05 000000080 INF: ===================Frame #619=================== 15-12-21 22:35:06.174 -05 000000090 INF: ===================Frame #621=================== 15-12-21 22:35:06.301 -05 000000080 INF: ===================Frame #631=================== 15-12-21 22:35:06.324 -05 000000090 INF: ===================Frame #633=================== 15-12-21 22:35:06.383 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:06.448 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:06.452 -05 000000080 INF: ===================Frame #643=================== 15-12-21 22:35:06.474 -05 000000090 INF: ===================Frame #645=================== 15-12-21 22:35:06.602 -05 000000080 INF: ===================Frame #655=================== 15-12-21 22:35:06.624 -05 000000090 INF: ===================Frame #656=================== 15-12-21 22:35:06.698 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:06.752 -05 000000080 INF: ===================Frame #666=================== 15-12-21 22:35:06.759 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:06.871 -05 000000090 INF: ===================Frame #676=================== 15-12-21 22:35:06.990 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:06.993 -05 000000080 INF: ===================Frame #686=================== 15-12-21 22:35:07.009 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:07.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:07.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:07.044 -05 000000090 INF: ===================Frame #690=================== 15-12-21 22:35:07.070 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:07.071 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 22:35:07.116 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:07.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:07.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:07.167 -05 000000080 INF: ===================Frame #699=================== 15-12-21 22:35:07.170 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:35:07.210 -05 000000090 INF: ===================Frame #703=================== 15-12-21 22:35:07.235 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:07.256 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 22:35:07.256 -05 000000057 INF: Current Position of Pump is: 28800 15-12-21 22:35:07.256 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:35:07.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:07.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:07.317 -05 000000080 INF: ===================Frame #711=================== 15-12-21 22:35:07.356 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:35:07.360 -05 000000090 INF: ===================Frame #715=================== 15-12-21 22:35:07.443 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:07.468 -05 000000080 INF: ===================Frame #723=================== 15-12-21 22:35:07.510 -05 000000090 INF: ===================Frame #726=================== 15-12-21 22:35:07.543 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:07.570 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:07.618 -05 000000080 INF: ===================Frame #735=================== 15-12-21 22:35:07.696 -05 000000090 INF: ===================Frame #741=================== 15-12-21 22:35:07.769 -05 000000080 INF: ===================Frame #747=================== 15-12-21 22:35:07.820 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:07.846 -05 000000090 INF: ===================Frame #753=================== 15-12-21 22:35:07.880 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:07.880 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:07.881 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:35:07.881 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:35:07.919 -05 000000080 INF: ===================Frame #759=================== 15-12-21 22:35:07.944 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:35:07.944 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:07.997 -05 000000090 INF: ===================Frame #765=================== 15-12-21 22:35:08.051 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:35:08.071 -05 000000080 INF: ===================Frame #771=================== 15-12-21 22:35:08.133 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:35:08.133 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:08.148 -05 000000090 INF: ===================Frame #777=================== 15-12-21 22:35:08.221 -05 000000080 INF: ===================Frame #783=================== 15-12-21 22:35:08.237 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:08.257 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 22.966C:A1\r\n 15-12-21 22:35:08.257 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:08.298 -05 000000090 INF: ===================Frame #789=================== 15-12-21 22:35:08.371 -05 000000080 INF: ===================Frame #794=================== 15-12-21 22:35:08.449 -05 000000090 INF: ===================Frame #801=================== 15-12-21 22:35:08.485 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:08.485 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:08.487 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:08.489 -05 000000057 INF: WaitCommand(5000) start 15-12-21 22:35:08.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 22:35:08.600 -05 000000090 INF: ===================Frame #813=================== 15-12-21 22:35:08.631 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:08.709 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:08.709 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:08.744 -05 000000080 INF: ===================Frame #823=================== 15-12-21 22:35:08.768 -05 000000090 INF: ===================Frame #826=================== 15-12-21 22:35:08.946 -05 000000080 INF: ===================Frame #836=================== 15-12-21 22:35:08.968 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:08.991 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:08.991 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:09.091 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:09.115 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 37.305C:A1\r\n 15-12-21 22:35:09.115 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:09.196 -05 000000080 INF: ===================Frame #860=================== 15-12-21 22:35:09.218 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:09.239 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:09.239 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:09.298 -05 000000090 INF: ===================Frame #868=================== 15-12-21 22:35:09.392 -05 000000080 INF: ===================Frame #875=================== 15-12-21 22:35:09.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:09.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 22:35:09.502 -05 000000090 INF: ===================Frame #884=================== 15-12-21 22:35:09.543 -05 000000080 INF: ===================Frame #887=================== 15-12-21 22:35:09.671 -05 000000090 INF: ===================Frame #897=================== 15-12-21 22:35:09.693 -05 000000080 INF: ===================Frame #899=================== 15-12-21 22:35:09.822 -05 000000090 INF: ===================Frame #909=================== 15-12-21 22:35:09.843 -05 000000080 INF: ===================Frame #911=================== 15-12-21 22:35:09.973 -05 000000090 INF: ===================Frame #921=================== 15-12-21 22:35:09.993 -05 000000080 INF: ===================Frame #923=================== 15-12-21 22:35:10.124 -05 000000090 INF: ===================Frame #933=================== 15-12-21 22:35:10.143 -05 000000080 INF: ===================Frame #935=================== 15-12-21 22:35:10.275 -05 000000090 INF: ===================Frame #945=================== 15-12-21 22:35:10.293 -05 000000080 INF: ===================Frame #946=================== 15-12-21 22:35:10.425 -05 000000090 INF: ===================Frame #957=================== 15-12-21 22:35:10.466 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:10.486 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:10.486 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:10.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:10.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 22:35:10.534 -05 000000080 INF: ===================Frame #965=================== 15-12-21 22:35:10.576 -05 000000090 INF: ===================Frame #969=================== 15-12-21 22:35:10.587 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:10.613 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:10.613 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:10.684 -05 000000080 INF: ===================Frame #977=================== 15-12-21 22:35:10.716 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:10.727 -05 000000090 INF: ===================Frame #981=================== 15-12-21 22:35:10.737 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:10.737 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:10.834 -05 000000080 INF: ===================Frame #989=================== 15-12-21 22:35:10.878 -05 000000090 INF: ===================Frame #993=================== 15-12-21 22:35:10.985 -05 000000080 INF: ===================Frame #1001=================== 15-12-21 22:35:10.989 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:11.028 -05 000000090 INF: ===================Frame #1005=================== 15-12-21 22:35:11.048 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:35:11.048 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:11.135 -05 000000080 INF: ===================Frame #1013=================== 15-12-21 22:35:11.179 -05 000000090 INF: ===================Frame #1016=================== 15-12-21 22:35:11.285 -05 000000080 INF: ===================Frame #1025=================== 15-12-21 22:35:11.435 -05 000000080 INF: ===================Frame #1037=================== 15-12-21 22:35:11.455 -05 000000090 INF: ===================Frame #1038=================== 15-12-21 22:35:11.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:11.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:35:11.585 -05 000000080 INF: ===================Frame #1049=================== 15-12-21 22:35:11.626 -05 000000090 INF: ===================Frame #1052=================== 15-12-21 22:35:11.736 -05 000000080 INF: ===================Frame #1061=================== 15-12-21 22:35:11.789 -05 000000090 INF: ===================Frame #1065=================== 15-12-21 22:35:11.886 -05 000000080 INF: ===================Frame #1072=================== 15-12-21 22:35:11.940 -05 000000090 INF: ===================Frame #1077=================== 15-12-21 22:35:11.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:11.984 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:11.984 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:12.090 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:12.091 -05 000000090 INF: ===================Frame #1089=================== 15-12-21 22:35:12.111 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:12.111 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:12.159 -05 000000080 INF: ===================Frame #1094=================== 15-12-21 22:35:12.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:12.235 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:12.235 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:12.241 -05 000000090 INF: ===================Frame #1100=================== 15-12-21 22:35:12.331 -05 000000080 INF: ===================Frame #1108=================== 15-12-21 22:35:12.442 -05 000000090 INF: ===================Frame #1116=================== 15-12-21 22:35:12.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:12.489 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:35:12.496 -05 000000080 INF: ===================Frame #1121=================== 15-12-21 22:35:12.606 -05 000000090 INF: ===================Frame #1129=================== 15-12-21 22:35:12.646 -05 000000080 INF: ===================Frame #1132=================== 15-12-21 22:35:12.757 -05 000000090 INF: ===================Frame #1141=================== 15-12-21 22:35:12.818 -05 000000080 INF: ===================Frame #1146=================== 15-12-21 22:35:12.908 -05 000000090 INF: ===================Frame #1153=================== 15-12-21 22:35:12.983 -05 000000080 INF: ===================Frame #1159=================== 15-12-21 22:35:13.059 -05 000000090 INF: ===================Frame #1165=================== 15-12-21 22:35:13.133 -05 000000080 INF: ===================Frame #1171=================== 15-12-21 22:35:13.210 -05 000000090 INF: ===================Frame #1177=================== 15-12-21 22:35:13.283 -05 000000080 INF: ===================Frame #1183=================== 15-12-21 22:35:13.361 -05 000000090 INF: ===================Frame #1189=================== 15-12-21 22:35:13.434 -05 000000080 INF: ===================Frame #1195=================== 15-12-21 22:35:13.457 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:13.483 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.724C:A1\r\n 15-12-21 22:35:13.483 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:13.490 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:13.491 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:13.491 -05 000000057 INF: WaitCommand(5000) end 15-12-21 22:35:13.491 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:13.492 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:13.496 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:13.498 -05 000000079 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:35:13.498 -05 000000022 INF: ===================WaitCommand=================== 15-12-21 22:35:13.498 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:13.498 -05 000000022 INF: WaitCommand(15000) start 15-12-21 22:35:13.499 -05 000000022 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:35:13.514 -05 000000090 INF: ===================Frame #1201=================== 15-12-21 22:35:13.586 -05 000000080 INF: ===================Frame #1207=================== 15-12-21 22:35:13.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:13.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:13.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:13.651 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:13.666 -05 000000090 INF: ===================Frame #1213=================== 15-12-21 22:35:13.736 -05 000000080 INF: ===================Frame #1219=================== 15-12-21 22:35:13.751 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:13.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:13.810 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:13.811 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:13.811 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:13.817 -05 000000090 INF: ===================Frame #1225=================== 15-12-21 22:35:13.886 -05 000000080 INF: ===================Frame #1231=================== 15-12-21 22:35:13.910 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:35:13.916 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:13.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:13.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:13.967 -05 000000090 INF: ===================Frame #1237=================== 15-12-21 22:35:13.997 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 22:35:13.997 -05 000000079 INF: Current Position of Pump is: 28800 15-12-21 22:35:13.997 -05 000000079 INF: Dispense Steps 48000 is greater than steps to home syringe 28800, reducing number of steps to 28800 15-12-21 22:35:13.997 -05 000000079 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:35:14.036 -05 000000080 INF: ===================Frame #1242=================== 15-12-21 22:35:14.097 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD28800R\r 15-12-21 22:35:14.118 -05 000000090 INF: ===================Frame #1249=================== 15-12-21 22:35:14.182 -05 000000095 INF: FPGA: Recv TDIYWAIT 15-12-21 22:35:14.183 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:14.183 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:35:14.188 -05 000000049 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:35:14.193 -05 000000063 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:35:14.193 -05 000000028 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:35:14.193 -05 000000063 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:35:14.195 -05 000000063 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:35:14.195 -05 000000063 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:35:14.195 -05 000000063 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:35:14.195 -05 000000028 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:35:14.195 -05 000000028 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:35:14.195 -05 000000028 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:35:14.197 -05 000000028 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:35:14.218 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:14.246 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 43.617C:A1\r\n 15-12-21 22:35:14.246 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:14.269 -05 000000090 INF: ===================Frame #1250=================== 15-12-21 22:35:14.288 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:14.325 -05 000000074 INF: FPGA: Recv EX1MV 15-12-21 22:35:14.325 -05 000000080 INF: ===================Frame #1250=================== 15-12-21 22:35:14.325 -05 000000063 INF: Excitation Filter 1: Moved 36 steps in 130.4348 ms 15-12-21 22:35:14.325 -05 000000063 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 132.0856 ms 15-12-21 22:35:14.325 -05 000000063 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 132.1791 ms 15-12-21 22:35:14.326 -05 000000063 INF: ====================================== 15-12-21 22:35:14.369 -05 000000080 INF: Camera complete - got 1250 frames. 15-12-21 22:35:14.373 -05 000000080 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:35:14.387 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:14.499 -05 000000022 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:35:14.525 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:35:14.547 -05 000000090 INF: Camera complete - got 1250 frames. 15-12-21 22:35:14.549 -05 000000090 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:35:14.551 -05 000000080 INF: ====================================== 15-12-21 22:35:14.572 -05 000000080 INF: FPGA: Recv EX2MV 15-12-21 22:35:14.572 -05 000000028 INF: Excitation Filter 2: Moved 107 steps in 376.8049 ms 15-12-21 22:35:14.572 -05 000000028 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 376.8931 ms 15-12-21 22:35:14.572 -05 000000028 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 378.6254 ms 15-12-21 22:35:14.572 -05 000000028 INF: ====================================== 15-12-21 22:35:14.574 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:35:14.581 -05 000000049 INF: ====================================== 15-12-21 22:35:14.637 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:14.679 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 22:35:14.697 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:14.699 -05 000000090 INF: ====================================== 15-12-21 22:35:14.701 -05 000000081 INF: ===================Camera TDI=================== 15-12-21 22:35:14.706 -05 000000081 INF: ====================================== 15-12-21 22:35:14.947 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:14.952 -05 000000055 INF: Y Motor: Moved to 9.0764 after 16939 ms 15-12-21 22:35:14.952 -05 000000055 INF: ====================================== 15-12-21 22:35:14.955 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:14.956 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:14.960 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:14.961 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:35:15.010 -05 000000028 INF: FPGA: Recv TDICLINES 10555 15-12-21 22:35:15.011 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:15.011 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:35:15.072 -05 000000078 INF: FPGA: Recv TDIYERD 907645 15-12-21 22:35:15.072 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:35:15.134 -05 000000049 INF: FPGA: Recv ZADCR 38482 15-12-21 22:35:15.135 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.147. Y moved -60.304 mm 15-12-21 22:35:15.135 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:35:15.175 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:15.196 -05 000000063 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:35:15.196 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:35:15.196 -05 000000062 INF: TDIScan finished after 23252.5772 ms 15-12-21 22:35:15.197 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:35:15.197 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:35:15.198 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:15.198 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:15.199 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.227 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.024 um 15-12-21 22:35:15.227 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.232 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.237 -05 000000049 INF: ===================Dither Clean Up Command=================== 15-12-21 22:35:15.237 -05 000000095 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:35:15.237 -05 000000090 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:35:15.237 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:35:15.239 -05 000000090 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:35:15.239 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:35:15.239 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:35:15.244 -05 000000063 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:35:15.246 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:35:15.246 -05 000000063 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:35:15.246 -05 000000080 INF: ===================LFT:Extracting coords=================== 15-12-21 22:35:15.258 -05 000000081 INF: FPGA: Recv ZSTEP 15-12-21 22:35:15.258 -05 000000081 INF: FPGA: Recv ZSEL 15-12-21 22:35:15.258 -05 000000063 INF: FPGA: Xmit ZDACW 44563\n 15-12-21 22:35:15.258 -05 000000055 INF: ====================================== 15-12-21 22:35:15.259 -05 000000090 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:35:15.260 -05 000000095 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:35:15.260 -05 000000090 INF: ====================================== 15-12-21 22:35:15.261 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:15.287 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:35:15.289 -05 000000080 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:35:15.292 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:15.292 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:15.293 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:15.293 -05 000000028 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:35:15.296 -05 000000024 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:35:15.296 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:35:15.296 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:15.299 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:35:15.326 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:15.328 -05 000000095 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:35:15.328 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:15.328 -05 000000090 INF: FPGA: Recv ZDACW 15-12-21 22:35:15.329 -05 000000095 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:35:15.329 -05 000000063 INF: ====================================== 15-12-21 22:35:15.329 -05 000000095 INF: ====================================== 15-12-21 22:35:15.384 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:15.384 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:15.470 -05 000000028 INF: LFT found best fwhm score 2.348278 in 125 ms 15-12-21 22:35:15.470 -05 000000028 INF: LFT found good score at index 8029 with fwhm value 2.348278. Next cycle, cycle 41 starting Z position for top surface is at -0.176 mm FC:B, C:40,L:1,T 15-12-21 22:35:15.470 -05 000000056 INF: LFT found best fwhm score 2.666937 in 125 ms 15-12-21 22:35:15.470 -05 000000056 INF: LFT found good score at index 8185 with fwhm value 2.666937. Next cycle, cycle 41 starting Z position for top surface is at -0.176 mm FC:B, C:40,L:1,T 15-12-21 22:35:15.471 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:15.471 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:15.471 -05 000000056 INF: ====================================== 15-12-21 22:35:15.471 -05 000000028 INF: ====================================== 15-12-21 22:35:15.471 -05 000000024 INF: LFT found best fwhm score 2.522469 in 125 ms 15-12-21 22:35:15.471 -05 000000024 INF: LFT found good score at index 2137 with fwhm value 2.522469. Next cycle, cycle 41 starting Z position for top surface is at -0.177 mm FC:B, C:40,L:1,T 15-12-21 22:35:15.471 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:15.472 -05 000000024 INF: ====================================== 15-12-21 22:35:15.483 -05 000000055 INF: LFT found best fwhm score 2.598894 in 136 ms 15-12-21 22:35:15.483 -05 000000055 INF: LFT found good score at index 7261 with fwhm value 2.598894. Next cycle, cycle 41 starting Z position for top surface is at -0.176 mm FC:B, C:40,L:1,T 15-12-21 22:35:15.483 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:15.484 -05 000000055 INF: ====================================== 15-12-21 22:35:15.486 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:15.486 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:35:15.487 -05 000000080 INF: LFT weighted average best Z for top surface is at -0.176mm FC:B, C:40,L:1,T 15-12-21 22:35:15.487 -05 000000080 INF: ====================================== 15-12-21 22:35:15.490 -05 000000049 INF: ====================================== 15-12-21 22:35:15.495 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.497 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:35:15.497 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.497 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:35:15.497 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.497 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:35:15.498 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.498 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:35:15.498 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.498 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:35:15.499 -05 000000022 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:35:15.499 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:35:15.504 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Waiting for image analysis, Dispensing port PortC, Delay 13 of 15 seconds left=================== 15-12-21 22:35:15.504 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Dispensing port PortC, Delay 13 of 15 seconds left=================== 15-12-21 22:35:15.504 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:35:15.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:35:15.505 -05 000000062 INF: Waited 4 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 4, buffer wait time 0 15-12-21 22:35:15.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:35:15.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:35:15.505 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:15.506 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:35:15.506 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:35:15.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:15.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:15.518 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.518 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:35:15.518 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:15.518 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -170.0 um, section = A_1 15-12-21 22:35:15.523 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:35:15.525 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:35:15.526 -05 000000080 INF: ===================MoveEmissionFilters=================== 15-12-21 22:35:15.526 -05 000000049 INF: ===================Move X,Y=================== 15-12-21 22:35:15.526 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:35:15.533 -05 000000049 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:35:15.533 -05 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:35:15.533 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:35:15.537 -05 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:35:15.540 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:35:15.540 -05 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:35:15.540 -05 000000056 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:35:15.540 -05 000000090 INF: ===================Move Y Motor without settling=================== 15-12-21 22:35:15.540 -05 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:35:15.540 -05 000000023 INF: ===================Move X Motor without settling=================== 15-12-21 22:35:15.540 -05 000000090 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:35:15.540 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:35:15.540 -05 000000023 INF: X Motor: Xmit PR VM\n 15-12-21 22:35:15.541 -05 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:35:15.541 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:35:15.545 -05 000000090 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:35:15.550 -05 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:35:15.551 -05 000000024 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:35:15.551 -05 000000081 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:35:15.553 -05 000000063 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:35:15.553 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:35:15.553 -05 000000024 INF: ====================================== 15-12-21 22:35:15.557 -05 000000090 INF: Y Motor: Xmit 1G\n 15-12-21 22:35:15.559 -05 000000063 INF: ====================================== 15-12-21 22:35:15.562 -05 000000081 INF: ====================================== 15-12-21 22:35:15.567 -05 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:35:15.572 -05 000000024 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:35:15.572 -05 000000063 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:35:15.573 -05 000000024 INF: ====================================== 15-12-21 22:35:15.573 -05 000000063 INF: ====================================== 15-12-21 22:35:15.573 -05 000000081 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:35:15.573 -05 000000078 INF: ====================================== 15-12-21 22:35:15.578 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:15.578 -05 000000081 INF: ====================================== 15-12-21 22:35:15.587 -05 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:35:15.587 -05 000000078 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:35:15.587 -05 000000078 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:35:15.588 -05 000000090 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:35:15.588 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:35:15.588 -05 000000078 INF: ====================================== 15-12-21 22:35:15.589 -05 000000023 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:35:15.589 -05 000000090 INF: Y Motor: Recv 1G\r\n 15-12-21 22:35:15.589 -05 000000023 INF: X Motor: Xmit PR VI\n 15-12-21 22:35:15.589 -05 000000024 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:35:15.589 -05 000000081 INF: ===================Camera Arm TDI=================== 15-12-21 22:35:15.590 -05 000000090 INF: Y Motor: Xmit 1D\n 15-12-21 22:35:15.590 -05 000000024 INF: ====================================== 15-12-21 22:35:15.591 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:15.592 -05 000000095 INF: ====================================== 15-12-21 22:35:15.594 -05 000000055 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:35:15.596 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:35:15.601 -05 000000063 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:35:15.601 -05 000000063 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:35:15.602 -05 000000063 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:35:15.602 -05 000000055 INF: ====================================== 15-12-21 22:35:15.604 -05 000000028 INF: ====================================== 15-12-21 22:35:15.606 -05 000000080 INF: ====================================== 15-12-21 22:35:15.649 -05 000000028 INF: FPGA: Recv ZSEL 15-12-21 22:35:15.650 -05 000000063 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:35:15.650 -05 000000090 INF: Y Motor: Recv 1D\r\n 15-12-21 22:35:15.650 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:15.650 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:15.650 -05 000000051 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104=================== 15-12-21 22:35:15.650 -05 000000048 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104=================== 15-12-21 22:35:15.650 -05 000000040 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105=================== 15-12-21 22:35:15.650 -05 000000027 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106=================== 15-12-21 22:35:15.651 -05 000000077 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106=================== 15-12-21 22:35:15.651 -05 000000090 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:35:15.651 -05 000000023 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:35:15.651 -05 000000023 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:35:15.651 -05 000000023 INF: X Motor: Moving to 76.7340 mm @15.000 mm/sec, started at 75.9653 mm 15-12-21 22:35:15.651 -05 000000023 INF: X Motor: Xmit MA 7264\n 15-12-21 22:35:15.657 -05 000000087 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104=================== 15-12-21 22:35:15.658 -05 000000090 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:35:15.658 -05 000000038 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1108, Registering and Extracting C040 L001 T1107=================== 15-12-21 22:35:15.658 -05 000000066 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1108, Registering and Extracting C040 L001 T1107=================== 15-12-21 22:35:15.661 -05 000000063 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:35:15.662 -05 000000063 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:35:15.662 -05 000000063 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:35:15.717 -05 000000078 INF: FPGA: Recv ZSTEP 15-12-21 22:35:15.718 -05 000000023 INF: X Motor: Recv MA 7264\r\n> 15-12-21 22:35:15.718 -05 000000023 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:35:15.718 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:15.723 -05 000000063 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:35:15.723 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:15.767 -05 000000063 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:35:15.767 -05 000000063 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:35:15.767 -05 000000063 INF: Z Motor: Arming to move to -0.1300 mm 15-12-21 22:35:15.767 -05 000000063 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:35:15.878 -05 000000028 INF: FPGA: Recv ZYT 15-12-21 22:35:15.878 -05 000000063 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907642 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:35:15.878 -05 000000063 INF: FPGA: Xmit ZARM 34078\n 15-12-21 22:35:15.907 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:15.928 -05 000000055 INF: FPGA: Recv ZARM 15-12-21 22:35:15.928 -05 000000063 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 49.6695 ms 15-12-21 22:35:15.928 -05 000000063 INF: Z Motor: ArmAbsStepped took 160.8156 ms 15-12-21 22:35:15.929 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:15.932 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:35:15.959 -05 000000063 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:35:15.975 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:35:16.011 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:16.011 -05 000000063 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:35:16.023 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:35:16.040 -05 000000063 INF: ====================================== 15-12-21 22:35:16.152 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:16.247 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:35:16.247 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:16.247 -05 000000023 INF: X Motor: Xmit PR ER\n 15-12-21 22:35:16.261 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:16.316 -05 000000023 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:35:16.316 -05 000000023 INF: X Motor: Moved to 76.7344 after 598 ms 15-12-21 22:35:16.318 -05 000000023 INF: ====================================== 15-12-21 22:35:16.367 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:16.499 -05 000000022 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:35:16.617 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:16.698 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:16.804 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:16.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:16.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:16.948 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:17.011 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:17.046 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:17.069 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:17.069 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:17.169 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:17.185 -05 000000081 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:35:17.185 -05 000000081 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:35:17.186 -05 000000081 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:35:17.196 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:17.196 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:17.274 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:17.338 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:17.501 -05 000000022 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:35:17.588 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:17.689 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:17.939 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:17.986 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:18.236 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:18.287 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:18.288 -05 000000079 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:35:18.288 -05 000000079 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:35:18.388 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:35:18.478 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:18.501 -05 000000022 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:35:18.578 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:18.581 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:18.600 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:18.600 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:18.661 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:18.704 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:18.725 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 18.647C:A1\r\n 15-12-21 22:35:18.725 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:18.817 -05 000000081 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:35:18.817 -05 000000081 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:35:18.817 -05 000000081 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:35:18.819 -05 000000081 INF: ====================================== 15-12-21 22:35:18.829 -05 000000056 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:35:18.831 -05 000000056 INF: ====================================== 15-12-21 22:35:18.835 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:18.910 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:18.910 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:18.911 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:18.971 -05 000000079 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:18.972 -05 000000079 INF: ====================================== 15-12-21 22:35:19.021 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:19.037 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:19.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:19.225 -05 000000090 INF: Y Motor: Moved to 70.6886 after 3568 ms 15-12-21 22:35:19.226 -05 000000090 INF: ====================================== 15-12-21 22:35:19.235 -05 000000049 INF: ===================Move X,Y=================== 15-12-21 22:35:19.237 -05 000000049 INF: ====================================== 15-12-21 22:35:19.239 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:35:19.246 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:19.246 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:35:19.285 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:35:19.286 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:35:19.346 -05 000000063 INF: FPGA: Recv ZFREQCL 15-12-21 22:35:19.347 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:35:19.347 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:19.347 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:35:19.375 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:19.408 -05 000000056 INF: FPGA: Recv TDIYERD 7068852 15-12-21 22:35:19.408 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068852 counts (70.689 mm) 15-12-21 22:35:19.409 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:35:19.413 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 49.403C:A1\r\n 15-12-21 22:35:19.413 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:19.414 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:35:19.416 -05 000000078 INF: ===================TDI FPGA Arm=================== 15-12-21 22:35:19.416 -05 000000090 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:35:19.420 -05 000000090 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:35:19.429 -05 000000078 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:35:19.431 -05 000000078 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:35:19.438 -05 000000078 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:35:19.471 -05 000000090 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:35:19.472 -05 000000090 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:35:19.472 -05 000000090 INF: ====================================== 15-12-21 22:35:19.502 -05 000000022 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:35:19.532 -05 000000024 INF: FPGA: Recv TDIYPOS 15-12-21 22:35:19.533 -05 000000078 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:35:19.541 -05 000000078 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:35:19.542 -05 000000078 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:35:19.594 -05 000000023 INF: FPGA: Recv TDIYARM3 15-12-21 22:35:19.595 -05 000000078 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:35:19.596 -05 000000078 INF: ===================TDI FPGA Arm=================== 15-12-21 22:35:19.598 -05 000000078 INF: ====================================== 15-12-21 22:35:19.606 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:35:19.610 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:19.611 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:19.626 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:19.638 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:19.647 -05 000000049 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:35:19.650 -05 000000055 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:35:19.650 -05 000000049 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:35:19.650 -05 000000049 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:35:19.650 -05 000000049 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:35:19.650 -05 000000049 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:35:19.650 -05 000000055 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:35:19.650 -05 000000055 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:35:19.650 -05 000000055 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:35:19.653 -05 000000055 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:35:19.877 -05 000000081 INF: FPGA: Recv EX1MV 15-12-21 22:35:19.877 -05 000000055 INF: Excitation Filter 1: Moved -36 steps in 227.0795 ms 15-12-21 22:35:19.878 -05 000000055 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 227.2308 ms 15-12-21 22:35:19.878 -05 000000055 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 227.4514 ms 15-12-21 22:35:19.879 -05 000000055 INF: ====================================== 15-12-21 22:35:20.063 -05 000000024 INF: FPGA: Recv EX2MV 15-12-21 22:35:20.063 -05 000000049 INF: Excitation Filter 2: Moved -107 steps in 413.2126 ms 15-12-21 22:35:20.063 -05 000000049 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 413.3619 ms 15-12-21 22:35:20.064 -05 000000049 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 413.5132 ms 15-12-21 22:35:20.065 -05 000000049 INF: ====================================== 15-12-21 22:35:20.068 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:20.074 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:20.099 -05 000000055 INF: ===================Move Y Motor without settling=================== 15-12-21 22:35:20.099 -05 000000056 INF: ===================FPGA Z Wait=================== 15-12-21 22:35:20.099 -05 000000024 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:35:20.099 -05 000000082 INF: ===================Camera TDI=================== 15-12-21 22:35:20.099 -05 000000055 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:35:20.099 -05 000000056 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:35:20.104 -05 000000055 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:35:20.104 -05 000000024 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:35:20.104 -05 000000082 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:35:20.138 -05 000000055 INF: Y Motor: Xmit 1G\n 15-12-21 22:35:20.138 -05 000000024 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:35:20.140 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 22:35:20.140 -05 000000095 INF: ===================Camera TDI=================== 15-12-21 22:35:20.181 -05 000000055 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:35:20.184 -05 000000055 INF: Y Motor: Recv 1G\r\n 15-12-21 22:35:20.188 -05 000000055 INF: Y Motor: Xmit 1D\n 15-12-21 22:35:20.236 -05 000000055 INF: Y Motor: Recv 1D\r\n 15-12-21 22:35:20.237 -05 000000055 INF: Y Motor: Recv *407662\r\n 15-12-21 22:35:20.238 -05 000000055 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:35:20.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:20.363 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:20.363 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:20.473 -05 000000027 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1108=================== 15-12-21 22:35:20.478 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:20.479 -05 000000063 INF: FPGA: Recv ZWAIT 15-12-21 22:35:20.479 -05 000000056 INF: ====================================== 15-12-21 22:35:20.489 -05 000000011 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1108, Registering and Extracting C040 L001 T1109=================== 15-12-21 22:35:20.502 -05 000000022 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:35:20.555 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:20.555 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:20.633 -05 000000090 INF: ===================Frame #4=================== 15-12-21 22:35:20.638 -05 000000095 INF: ===================Frame #5=================== 15-12-21 22:35:20.678 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:20.736 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:20.736 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:20.788 -05 000000095 INF: ===================Frame #17=================== 15-12-21 22:35:20.793 -05 000000090 INF: ===================Frame #17=================== 15-12-21 22:35:20.881 -05 000000077 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1108=================== 15-12-21 22:35:20.889 -05 000000060 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1108, Registering and Extracting C040 L001 T1110=================== 15-12-21 22:35:20.940 -05 000000095 INF: ===================Frame #29=================== 15-12-21 22:35:20.948 -05 000000090 INF: ===================Frame #29=================== 15-12-21 22:35:20.950 -05 000000040 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1108=================== 15-12-21 22:35:20.987 -05 000000051 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106=================== 15-12-21 22:35:20.990 -05 000000089 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111=================== 15-12-21 22:35:20.990 -05 000000075 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111, Registering and Extracting C040 L001 T1112=================== 15-12-21 22:35:21.064 -05 000000087 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111=================== 15-12-21 22:35:21.090 -05 000000071 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111, Registering and Extracting C040 L001 T1113=================== 15-12-21 22:35:21.091 -05 000000095 INF: ===================Frame #40=================== 15-12-21 22:35:21.098 -05 000000090 INF: ===================Frame #41=================== 15-12-21 22:35:21.157 -05 000000048 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111=================== 15-12-21 22:35:21.190 -05 000000094 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111, Registering and Extracting C040 L001 T1114=================== 15-12-21 22:35:21.248 -05 000000090 INF: ===================Frame #53=================== 15-12-21 22:35:21.354 -05 000000038 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111=================== 15-12-21 22:35:21.390 -05 000000065 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111, Registering and Extracting C040 L001 T1115=================== 15-12-21 22:35:21.400 -05 000000090 INF: ===================Frame #65=================== 15-12-21 22:35:21.426 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:21.429 -05 000000095 INF: ===================Frame #67=================== 15-12-21 22:35:21.434 -05 000000066 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111=================== 15-12-21 22:35:21.486 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:35:21.486 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:21.490 -05 000000009 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111, Registering and Extracting C040 L001 T1116=================== 15-12-21 22:35:21.502 -05 000000022 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:35:21.550 -05 000000090 INF: ===================Frame #77=================== 15-12-21 22:35:21.579 -05 000000095 INF: ===================Frame #79=================== 15-12-21 22:35:21.718 -05 000000090 INF: ===================Frame #90=================== 15-12-21 22:35:21.753 -05 000000095 INF: ===================Frame #93=================== 15-12-21 22:35:21.904 -05 000000095 INF: ===================Frame #105=================== 15-12-21 22:35:21.967 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:22.053 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:22.053 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:22.055 -05 000000095 INF: ===================Frame #117=================== 15-12-21 22:35:22.153 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:22.179 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:22.179 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:22.206 -05 000000095 INF: ===================Frame #129=================== 15-12-21 22:35:22.306 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:22.360 -05 000000095 INF: ===================Frame #141=================== 15-12-21 22:35:22.375 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:22.375 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:22.503 -05 000000022 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:35:22.510 -05 000000095 INF: ===================Frame #153=================== 15-12-21 22:35:22.559 -05 000000090 INF: ===================Frame #157=================== 15-12-21 22:35:22.662 -05 000000095 INF: ===================Frame #165=================== 15-12-21 22:35:22.754 -05 000000090 INF: ===================Frame #172=================== 15-12-21 22:35:22.812 -05 000000095 INF: ===================Frame #177=================== 15-12-21 22:35:22.962 -05 000000095 INF: ===================Frame #188=================== 15-12-21 22:35:23.504 -05 000000022 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:35:23.655 -05 000000090 INF: ===================Frame #243=================== 15-12-21 22:35:23.670 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:23.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:23.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:23.787 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:23.807 -05 000000090 INF: ===================Frame #255=================== 15-12-21 22:35:23.808 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:23.808 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:23.942 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:23.958 -05 000000090 INF: ===================Frame #267=================== 15-12-21 22:35:23.996 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.267C:A1\r\n 15-12-21 22:35:23.996 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:24.061 -05 000000095 INF: ===================Frame #275=================== 15-12-21 22:35:24.098 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:24.108 -05 000000090 INF: ===================Frame #279=================== 15-12-21 22:35:24.120 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:24.120 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:24.211 -05 000000095 INF: ===================Frame #287=================== 15-12-21 22:35:24.259 -05 000000090 INF: ===================Frame #291=================== 15-12-21 22:35:24.363 -05 000000095 INF: ===================Frame #299=================== 15-12-21 22:35:24.410 -05 000000090 INF: ===================Frame #303=================== 15-12-21 22:35:24.505 -05 000000022 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:35:24.513 -05 000000095 INF: ===================Frame #311=================== 15-12-21 22:35:24.525 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:24.540 -05 000000011 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106, Registering and Extracting C040 L001 T1111=================== 15-12-21 22:35:24.558 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 54.653C:A1\r\n 15-12-21 22:35:24.558 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:24.561 -05 000000090 INF: ===================Frame #315=================== 15-12-21 22:35:24.675 -05 000000095 INF: ===================Frame #324=================== 15-12-21 22:35:24.715 -05 000000090 INF: ===================Frame #327=================== 15-12-21 22:35:24.879 -05 000000090 INF: ===================Frame #340=================== 15-12-21 22:35:25.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:25.463 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:25.463 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:25.507 -05 000000022 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:35:25.606 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:25.672 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:25.672 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:25.802 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:25.845 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:25.845 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:26.038 -05 000000060 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104, Registering and Extracting C040 L001 T1105, Registering and Extracting C040 L001 T1106=================== 15-12-21 22:35:26.082 -05 000000095 INF: ===================Frame #435=================== 15-12-21 22:35:26.234 -05 000000095 INF: ===================Frame #447=================== 15-12-21 22:35:26.284 -05 000000090 INF: ===================Frame #451=================== 15-12-21 22:35:26.384 -05 000000095 INF: ===================Frame #459=================== 15-12-21 22:35:26.428 -05 000000089 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104=================== 15-12-21 22:35:26.428 -05 000000075 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103, Registering and Extracting C040 L001 T1104=================== 15-12-21 22:35:26.435 -05 000000090 INF: ===================Frame #463=================== 15-12-21 22:35:26.507 -05 000000022 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:35:26.534 -05 000000095 INF: ===================Frame #471=================== 15-12-21 22:35:26.585 -05 000000090 INF: ===================Frame #475=================== 15-12-21 22:35:26.603 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:26.637 -05 000000094 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102, Registering and Extracting C040 L001 T1103=================== 15-12-21 22:35:26.647 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:35:26.647 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:26.685 -05 000000095 INF: ===================Frame #483=================== 15-12-21 22:35:26.735 -05 000000090 INF: ===================Frame #487=================== 15-12-21 22:35:26.810 -05 000000065 INF: ===================Registering and Extracting C040 L001 T1101, Registering and Extracting C040 L001 T1102=================== 15-12-21 22:35:26.835 -05 000000095 INF: ===================Frame #495=================== 15-12-21 22:35:26.885 -05 000000090 INF: ===================Frame #499=================== 15-12-21 22:35:26.964 -05 000000071 INF: ===================Registering and Extracting C040 L001 T1101=================== 15-12-21 22:35:26.985 -05 000000095 INF: ===================Frame #507=================== 15-12-21 22:35:27.032 -05 000000009 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:35:27.036 -05 000000090 INF: ===================Frame #511=================== 15-12-21 22:35:27.061 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:27.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:27.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:27.107 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:27.113 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:35:27.136 -05 000000095 INF: ===================Frame #519=================== 15-12-21 22:35:27.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:27.187 -05 000000090 INF: ===================Frame #523=================== 15-12-21 22:35:27.209 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:27.209 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:27.223 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:27.231 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:35:27.287 -05 000000095 INF: ===================Frame #530=================== 15-12-21 22:35:27.308 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:27.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:27.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:27.336 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:27.339 -05 000000090 INF: ===================Frame #535=================== 15-12-21 22:35:27.344 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:35:27.462 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:27.473 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:35:27.490 -05 000000090 INF: ===================Frame #546=================== 15-12-21 22:35:27.507 -05 000000022 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:35:27.602 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:27.775 -05 000000095 INF: ===================Frame #569=================== 15-12-21 22:35:27.926 -05 000000095 INF: ===================Frame #581=================== 15-12-21 22:35:28.015 -05 000000090 INF: ===================Frame #588=================== 15-12-21 22:35:28.078 -05 000000095 INF: ===================Frame #593=================== 15-12-21 22:35:28.228 -05 000000095 INF: ===================Frame #605=================== 15-12-21 22:35:28.249 -05 000000090 INF: ===================Frame #606=================== 15-12-21 22:35:28.379 -05 000000095 INF: ===================Frame #617=================== 15-12-21 22:35:28.432 -05 000000090 INF: ===================Frame #621=================== 15-12-21 22:35:28.499 -05 000000022 INF: ===================WaitCommand=================== 15-12-21 22:35:28.500 -05 000000022 INF: WaitCommand(15000) end 15-12-21 22:35:28.500 -05 000000022 INF: ====================================== 15-12-21 22:35:28.502 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:28.506 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:28.510 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:28.510 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:28.536 -05 000000095 INF: ===================Frame #629=================== 15-12-21 22:35:28.584 -05 000000090 INF: ===================Frame #633=================== 15-12-21 22:35:28.586 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:28.588 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:28.588 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Selecting Reagent CWM (8)=================== 15-12-21 22:35:28.588 -05 000000057 INF: Valve A2: Go to position 8 15-12-21 22:35:28.588 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:35:28.645 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 7\r 15-12-21 22:35:28.645 -05 000000057 INF: Valve A2: 30.967 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:35:28.645 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 7 to 8 15-12-21 22:35:28.645 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW8\r 15-12-21 22:35:28.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:28.686 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:35:28.711 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:35:28.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:28.712 -05 000000095 INF: ===================Frame #643=================== 15-12-21 22:35:28.737 -05 000000090 INF: ===================Frame #645=================== 15-12-21 22:35:28.921 -05 000000090 INF: ===================Frame #657=================== 15-12-21 22:35:28.923 -05 000000095 INF: ===================Frame #656=================== 15-12-21 22:35:28.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:29.019 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:29.019 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:29.058 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 8\r 15-12-21 22:35:29.059 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:29.059 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:35:29.071 -05 000000090 INF: ===================Frame #671=================== 15-12-21 22:35:29.127 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:35:29.143 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:35:29.143 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:29.221 -05 000000090 INF: ===================Frame #683=================== 15-12-21 22:35:29.249 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:29.270 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.055C:A1\r\n 15-12-21 22:35:29.270 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:29.301 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:35:29.372 -05 000000090 INF: ===================Frame #695=================== 15-12-21 22:35:29.377 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:29.393 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:29.393 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:29.419 -05 000000095 INF: ===================Frame #699=================== 15-12-21 22:35:29.498 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:35:29.520 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:35:29.520 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:29.523 -05 000000090 INF: ===================Frame #707=================== 15-12-21 22:35:29.569 -05 000000095 INF: ===================Frame #711=================== 15-12-21 22:35:29.621 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:35:29.643 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:35:29.643 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:29.673 -05 000000090 INF: ===================Frame #719=================== 15-12-21 22:35:29.719 -05 000000095 INF: ===================Frame #723=================== 15-12-21 22:35:29.745 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:29.746 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:29.746 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 22:35:29.746 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:29.767 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 58.958C:A1\r\n 15-12-21 22:35:29.767 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:29.815 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:29.824 -05 000000090 INF: ===================Frame #731=================== 15-12-21 22:35:29.826 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:35:29.870 -05 000000095 INF: ===================Frame #735=================== 15-12-21 22:35:29.915 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:35:29.975 -05 000000090 INF: ===================Frame #743=================== 15-12-21 22:35:30.000 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:35:30.000 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 22:35:30.003 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:35:30.021 -05 000000095 INF: ===================Frame #747=================== 15-12-21 22:35:30.100 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P4608R\r 15-12-21 22:35:30.125 -05 000000090 INF: ===================Frame #755=================== 15-12-21 22:35:30.171 -05 000000095 INF: ===================Frame #758=================== 15-12-21 22:35:30.189 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:30.277 -05 000000090 INF: ===================Frame #767=================== 15-12-21 22:35:30.289 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:30.313 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:30.427 -05 000000095 INF: ===================Frame #779=================== 15-12-21 22:35:30.427 -05 000000090 INF: ===================Frame #779=================== 15-12-21 22:35:30.563 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:30.578 -05 000000095 INF: ===================Frame #791=================== 15-12-21 22:35:30.578 -05 000000090 INF: ===================Frame #791=================== 15-12-21 22:35:30.621 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:30.624 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:30.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:30.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:30.728 -05 000000095 INF: ===================Frame #802=================== 15-12-21 22:35:30.728 -05 000000090 INF: ===================Frame #802=================== 15-12-21 22:35:30.742 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:30.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:30.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:30.868 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:30.874 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:30.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:30.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:30.936 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:30.963 -05 000000095 INF: ===================Frame #821=================== 15-12-21 22:35:31.114 -05 000000095 INF: ===================Frame #833=================== 15-12-21 22:35:31.157 -05 000000090 INF: ===================Frame #836=================== 15-12-21 22:35:31.186 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:31.248 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:31.264 -05 000000095 INF: ===================Frame #845=================== 15-12-21 22:35:31.346 -05 000000090 INF: ===================Frame #851=================== 15-12-21 22:35:31.414 -05 000000095 INF: ===================Frame #857=================== 15-12-21 22:35:31.497 -05 000000090 INF: ===================Frame #863=================== 15-12-21 22:35:31.498 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:31.562 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:31.564 -05 000000095 INF: ===================Frame #869=================== 15-12-21 22:35:31.647 -05 000000090 INF: ===================Frame #875=================== 15-12-21 22:35:31.714 -05 000000095 INF: ===================Frame #880=================== 15-12-21 22:35:31.750 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:31.766 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:35:31.766 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:31.798 -05 000000090 INF: ===================Frame #887=================== 15-12-21 22:35:31.812 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:31.874 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:31.949 -05 000000090 INF: ===================Frame #899=================== 15-12-21 22:35:31.957 -05 000000095 INF: ===================Frame #900=================== 15-12-21 22:35:32.100 -05 000000090 INF: ===================Frame #911=================== 15-12-21 22:35:32.119 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:32.124 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:32.128 -05 000000095 INF: ===================Frame #913=================== 15-12-21 22:35:32.140 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:32.140 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:32.185 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:32.185 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 22:35:32.244 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:32.251 -05 000000090 INF: ===================Frame #923=================== 15-12-21 22:35:32.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:32.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:32.278 -05 000000095 INF: ===================Frame #925=================== 15-12-21 22:35:32.285 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:35:32.372 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:32.375 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 22:35:32.375 -05 000000057 INF: Current Position of Pump is: 4608 15-12-21 22:35:32.375 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:35:32.389 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:32.389 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:32.401 -05 000000090 INF: ===================Frame #935=================== 15-12-21 22:35:32.428 -05 000000095 INF: ===================Frame #937=================== 15-12-21 22:35:32.475 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:35:32.552 -05 000000090 INF: ===================Frame #947=================== 15-12-21 22:35:32.558 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:32.578 -05 000000095 INF: ===================Frame #949=================== 15-12-21 22:35:32.658 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:32.684 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:32.703 -05 000000090 INF: ===================Frame #959=================== 15-12-21 22:35:32.728 -05 000000095 INF: ===================Frame #961=================== 15-12-21 22:35:32.853 -05 000000090 INF: ===================Frame #970=================== 15-12-21 22:35:32.878 -05 000000095 INF: ===================Frame #972=================== 15-12-21 22:35:32.934 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:32.995 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:32.996 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:32.996 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:35:32.996 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:35:33.011 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:35:33.011 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:33.119 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:35:33.137 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:35:33.137 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:33.170 -05 000000095 INF: ===================Frame #996=================== 15-12-21 22:35:33.208 -05 000000090 INF: ===================Frame #999=================== 15-12-21 22:35:33.247 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:35:33.326 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:35:33.326 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:33.346 -05 000000095 INF: ===================Frame #1009=================== 15-12-21 22:35:33.359 -05 000000090 INF: ===================Frame #1010=================== 15-12-21 22:35:33.432 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:33.433 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:33.437 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:33.437 -05 000000057 INF: WaitCommand(5000) start 15-12-21 22:35:33.437 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 22:35:33.496 -05 000000095 INF: ===================Frame #1021=================== 15-12-21 22:35:33.555 -05 000000090 INF: ===================Frame #1026=================== 15-12-21 22:35:33.646 -05 000000095 INF: ===================Frame #1033=================== 15-12-21 22:35:33.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:33.699 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:33.699 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:33.720 -05 000000090 INF: ===================Frame #1039=================== 15-12-21 22:35:33.796 -05 000000095 INF: ===================Frame #1045=================== 15-12-21 22:35:33.807 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:33.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:33.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:33.871 -05 000000090 INF: ===================Frame #1051=================== 15-12-21 22:35:33.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:33.947 -05 000000095 INF: ===================Frame #1057=================== 15-12-21 22:35:34.010 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:34.010 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:34.022 -05 000000090 INF: ===================Frame #1063=================== 15-12-21 22:35:34.097 -05 000000095 INF: ===================Frame #1069=================== 15-12-21 22:35:34.172 -05 000000090 INF: ===================Frame #1075=================== 15-12-21 22:35:34.247 -05 000000095 INF: ===================Frame #1081=================== 15-12-21 22:35:34.323 -05 000000090 INF: ===================Frame #1087=================== 15-12-21 22:35:34.377 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:34.385 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 18.458C:A1\r\n 15-12-21 22:35:34.385 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:34.397 -05 000000095 INF: ===================Frame #1093=================== 15-12-21 22:35:34.438 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:34.438 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 22:35:34.473 -05 000000090 INF: ===================Frame #1099=================== 15-12-21 22:35:34.547 -05 000000095 INF: ===================Frame #1104=================== 15-12-21 22:35:34.624 -05 000000090 INF: ===================Frame #1111=================== 15-12-21 22:35:34.774 -05 000000090 INF: ===================Frame #1122=================== 15-12-21 22:35:34.803 -05 000000095 INF: ===================Frame #1125=================== 15-12-21 22:35:34.874 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:34.945 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.890C:A1\r\n 15-12-21 22:35:34.945 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:34.954 -05 000000095 INF: ===================Frame #1137=================== 15-12-21 22:35:35.026 -05 000000090 INF: ===================Frame #1142=================== 15-12-21 22:35:35.104 -05 000000095 INF: ===================Frame #1148=================== 15-12-21 22:35:35.196 -05 000000090 INF: ===================Frame #1156=================== 15-12-21 22:35:35.237 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:35.260 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:35.260 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:35.299 -05 000000095 INF: ===================Frame #1164=================== 15-12-21 22:35:35.359 -05 000000090 INF: ===================Frame #1169=================== 15-12-21 22:35:35.362 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:35.384 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:35.384 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:35.438 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:35.438 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 22:35:35.467 -05 000000095 INF: ===================Frame #1177=================== 15-12-21 22:35:35.484 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:35.507 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:35.507 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:35.510 -05 000000090 INF: ===================Frame #1181=================== 15-12-21 22:35:35.617 -05 000000095 INF: ===================Frame #1189=================== 15-12-21 22:35:35.661 -05 000000090 INF: ===================Frame #1192=================== 15-12-21 22:35:35.767 -05 000000095 INF: ===================Frame #1201=================== 15-12-21 22:35:35.847 -05 000000090 INF: ===================Frame #1207=================== 15-12-21 22:35:35.917 -05 000000095 INF: ===================Frame #1213=================== 15-12-21 22:35:35.998 -05 000000090 INF: ===================Frame #1219=================== 15-12-21 22:35:36.067 -05 000000095 INF: ===================Frame #1225=================== 15-12-21 22:35:36.148 -05 000000090 INF: ===================Frame #1231=================== 15-12-21 22:35:36.217 -05 000000095 INF: ===================Frame #1236=================== 15-12-21 22:35:36.299 -05 000000090 INF: ===================Frame #1243=================== 15-12-21 22:35:36.438 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:36.438 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:35:36.440 -05 000000095 INF: ===================Frame #1250=================== 15-12-21 22:35:36.442 -05 000000049 INF: FPGA: Recv TDIYWAIT 15-12-21 22:35:36.443 -05 000000024 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:35:36.450 -05 000000090 INF: ===================Frame #1250=================== 15-12-21 22:35:36.451 -05 000000024 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:35:36.456 -05 000000028 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:35:36.456 -05 000000028 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:35:36.456 -05 000000028 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:35:36.456 -05 000000028 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:35:36.456 -05 000000028 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:35:36.456 -05 000000056 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:35:36.457 -05 000000056 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:35:36.457 -05 000000056 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:35:36.457 -05 000000056 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:35:36.464 -05 000000056 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:35:36.476 -05 000000095 INF: Camera complete - got 1250 frames. 15-12-21 22:35:36.478 -05 000000095 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:35:36.532 -05 000000090 INF: Camera complete - got 1250 frames. 15-12-21 22:35:36.533 -05 000000090 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:35:36.630 -05 000000079 INF: FPGA: Recv EX1MV 15-12-21 22:35:36.630 -05 000000056 INF: Excitation Filter 1: Moved 36 steps in 173.5245 ms 15-12-21 22:35:36.630 -05 000000056 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 173.6565 ms 15-12-21 22:35:36.631 -05 000000056 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 173.8143 ms 15-12-21 22:35:36.632 -05 000000056 INF: ====================================== 15-12-21 22:35:36.734 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:36.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:36.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:36.845 -05 000000095 INF: ===================Camera TDI=================== 15-12-21 22:35:36.858 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:36.870 -05 000000095 INF: ====================================== 15-12-21 22:35:36.879 -05 000000068 INF: FPGA: Recv EX2MV 15-12-21 22:35:36.879 -05 000000028 INF: Excitation Filter 2: Moved 107 steps in 422.9003 ms 15-12-21 22:35:36.879 -05 000000028 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 422.9962 ms 15-12-21 22:35:36.879 -05 000000028 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 423.0663 ms 15-12-21 22:35:36.879 -05 000000028 INF: ====================================== 15-12-21 22:35:36.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:36.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:36.881 -05 000000024 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:35:36.882 -05 000000024 INF: ====================================== 15-12-21 22:35:36.938 -05 000000055 INF: Y Motor: Moved to 9.0764 after 16701 ms 15-12-21 22:35:36.939 -05 000000055 INF: ====================================== 15-12-21 22:35:36.998 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:37.065 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:35:37.065 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:37.070 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 22:35:37.100 -05 000000090 INF: ====================================== 15-12-21 22:35:37.116 -05 000000082 INF: ===================Camera TDI=================== 15-12-21 22:35:37.120 -05 000000082 INF: ====================================== 15-12-21 22:35:37.154 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:37.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:37.186 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:37.188 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.188 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:35:37.239 -05 000000029 INF: FPGA: Recv TDICLINES 10231 15-12-21 22:35:37.239 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:35:37.241 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:37.241 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:37.331 -05 000000085 INF: FPGA: Recv TDIYERD 907647 15-12-21 22:35:37.331 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:35:37.395 -05 000000068 INF: FPGA: Recv ZADCR 38658 15-12-21 22:35:37.395 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.147. Y moved -60.304 mm 15-12-21 22:35:37.395 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:35:37.438 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:37.438 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:35:37.456 -05 000000068 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:35:37.456 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:35:37.456 -05 000000062 INF: TDIScan finished after 21951.1924 ms 15-12-21 22:35:37.457 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:35:37.457 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:35:37.463 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.492 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.290 um 15-12-21 22:35:37.493 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.495 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.502 -05 000000082 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:35:37.502 -05 000000056 INF: ===================Dither Clean Up Command=================== 15-12-21 22:35:37.503 -05 000000082 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:35:37.503 -05 000000024 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:35:37.503 -05 000000024 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:35:37.503 -05 000000024 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:35:37.503 -05 000000049 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:35:37.507 -05 000000080 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:35:37.511 -05 000000078 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:35:37.515 -05 000000080 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:35:37.515 -05 000000078 INF: ===================LFT:Extracting coords=================== 15-12-21 22:35:37.523 -05 000000082 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:35:37.524 -05 000000082 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:35:37.524 -05 000000049 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:35:37.524 -05 000000082 INF: ====================================== 15-12-21 22:35:37.550 -05 000000078 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:35:37.552 -05 000000078 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:35:37.555 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:37.555 -05 000000095 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:37.555 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:37.556 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:37.556 -05 000000063 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:35:37.556 -05 000000095 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:35:37.556 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:35:37.559 -05 000000068 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:35:37.582 -05 000000055 INF: FPGA: Recv ZSTEP 15-12-21 22:35:37.582 -05 000000055 INF: FPGA: Recv ZSEL 15-12-21 22:35:37.582 -05 000000080 INF: FPGA: Xmit ZDACW 44563\n 15-12-21 22:35:37.583 -05 000000049 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:35:37.583 -05 000000024 INF: ====================================== 15-12-21 22:35:37.584 -05 000000049 INF: ====================================== 15-12-21 22:35:37.644 -05 000000079 INF: FPGA: Recv ZDACW 15-12-21 22:35:37.645 -05 000000080 INF: ====================================== 15-12-21 22:35:37.733 -05 000000063 INF: LFT found best fwhm score 2.646994 in 128 ms 15-12-21 22:35:37.733 -05 000000063 INF: LFT found good score at index 8153 with fwhm value 2.646994. Next cycle, cycle 41 starting Z position for top surface is at -0.172 mm FC:B, C:40,L:1,T 15-12-21 22:35:37.733 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:37.734 -05 000000063 INF: ====================================== 15-12-21 22:35:37.735 -05 000000090 INF: LFT found best fwhm score 2.604361 in 131 ms 15-12-21 22:35:37.735 -05 000000090 INF: LFT found good score at index 5333 with fwhm value 2.604361. Next cycle, cycle 41 starting Z position for top surface is at -0.173 mm FC:B, C:40,L:1,T 15-12-21 22:35:37.735 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:37.735 -05 000000090 INF: ====================================== 15-12-21 22:35:37.793 -05 000000095 INF: LFT found best fwhm score 2.520799 in 191 ms 15-12-21 22:35:37.793 -05 000000095 INF: LFT found good score at index 9 with fwhm value 2.520799. Next cycle, cycle 41 starting Z position for top surface is at -0.175 mm FC:B, C:40,L:1,T 15-12-21 22:35:37.794 -05 000000095 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:37.794 -05 000000068 INF: LFT found best fwhm score 2.342337 in 191 ms 15-12-21 22:35:37.794 -05 000000068 INF: LFT found good score at index 7785 with fwhm value 2.342337. Next cycle, cycle 41 starting Z position for top surface is at -0.173 mm FC:B, C:40,L:1,T 15-12-21 22:35:37.794 -05 000000095 INF: ====================================== 15-12-21 22:35:37.795 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:35:37.795 -05 000000068 INF: ====================================== 15-12-21 22:35:37.798 -05 000000078 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:35:37.800 -05 000000078 INF: LFT weighted average best Z for top surface is at -0.173mm FC:B, C:40,L:1,T 15-12-21 22:35:37.803 -05 000000078 INF: ====================================== 15-12-21 22:35:37.807 -05 000000056 INF: ====================================== 15-12-21 22:35:37.812 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.817 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:35:37.817 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.817 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:35:37.818 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.818 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:35:37.818 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.818 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:35:37.818 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:37.819 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:35:37.819 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:35:37.821 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left, Waiting for image analysis=================== 15-12-21 22:35:37.825 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:35:37.825 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:35:37.825 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:35:37.825 -05 000000062 INF: Waited 4 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 4, buffer wait time 0 15-12-21 22:35:37.825 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:35:37.826 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:37.826 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:35:37.826 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:35:37.827 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 1=================== 15-12-21 22:35:37.832 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface=================== 15-12-21 22:35:37.852 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:35:37.854 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:35:37.856 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:35:37.863 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:35:37.965 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:35:37.965 -05 000000062 INF: Compensator: Remaining IntoPath 15-12-21 22:35:37.965 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:35:37.967 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:35:38.002 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:35:38.007 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:35:38.019 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:38.019 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:35:38.019 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:38.019 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -170.0 um, section = B_1 15-12-21 22:35:38.022 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:35:38.023 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:35:38.024 -05 000000068 INF: ===================MoveEmissionFilters=================== 15-12-21 22:35:38.024 -05 000000080 INF: ===================Move X,Y=================== 15-12-21 22:35:38.027 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:35:38.027 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:35:38.027 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:35:38.027 -05 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:35:38.027 -05 000000080 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:35:38.028 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:35:38.028 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:35:38.028 -05 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:35:38.028 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:35:38.028 -05 000000090 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:35:38.028 -05 000000090 INF: Z Motor: Moving to -0.1731 mm, started at -0.1700 mm 15-12-21 22:35:38.028 -05 000000090 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:35:38.032 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:35:38.032 -05 000000063 INF: ===================Move X Motor without settling=================== 15-12-21 22:35:38.032 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:35:38.032 -05 000000063 INF: X Motor: Xmit PR VM\n 15-12-21 22:35:38.032 -05 000000085 INF: ===================Move Y Motor without settling=================== 15-12-21 22:35:38.032 -05 000000085 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:35:38.032 -05 000000085 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:35:38.033 -05 000000024 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:35:38.033 -05 000000028 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:35:38.033 -05 000000049 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:35:38.037 -05 000000085 INF: Y Motor: Xmit 1G\n 15-12-21 22:35:38.037 -05 000000056 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:35:38.037 -05 000000055 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:35:38.037 -05 000000078 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:35:38.037 -05 000000028 INF: ====================================== 15-12-21 22:35:38.042 -05 000000078 INF: ====================================== 15-12-21 22:35:38.045 -05 000000056 INF: ====================================== 15-12-21 22:35:38.045 -05 000000049 INF: ====================================== 15-12-21 22:35:38.047 -05 000000055 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:35:38.050 -05 000000055 INF: ====================================== 15-12-21 22:35:38.050 -05 000000024 INF: ====================================== 15-12-21 22:35:38.055 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:35:38.055 -05 000000056 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:35:38.056 -05 000000078 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:35:38.058 -05 000000056 INF: ====================================== 15-12-21 22:35:38.058 -05 000000095 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:35:38.058 -05 000000078 INF: ====================================== 15-12-21 22:35:38.061 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:35:38.066 -05 000000082 INF: ====================================== 15-12-21 22:35:38.071 -05 000000095 INF: ====================================== 15-12-21 22:35:38.074 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:35:38.076 -05 000000079 INF: ====================================== 15-12-21 22:35:38.079 -05 000000049 INF: FPGA: Recv ZTRG 15-12-21 22:35:38.079 -05 000000090 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:35:38.079 -05 000000029 INF: ====================================== 15-12-21 22:35:38.083 -05 000000085 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:35:38.084 -05 000000063 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:35:38.084 -05 000000063 INF: X Motor: Xmit PR VI\n 15-12-21 22:35:38.084 -05 000000085 INF: Y Motor: Recv 1G\r\n 15-12-21 22:35:38.084 -05 000000068 INF: ====================================== 15-12-21 22:35:38.086 -05 000000085 INF: Y Motor: Xmit 1D\n 15-12-21 22:35:38.109 -05 000000009 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204=================== 15-12-21 22:35:38.109 -05 000000065 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204=================== 15-12-21 22:35:38.109 -05 000000094 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204=================== 15-12-21 22:35:38.109 -05 000000071 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205=================== 15-12-21 22:35:38.113 -05 000000074 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204=================== 15-12-21 22:35:38.128 -05 000000075 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1207=================== 15-12-21 22:35:38.128 -05 000000089 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1207=================== 15-12-21 22:35:38.129 -05 000000060 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1207, Registering and Extracting C040 L001 T1208=================== 15-12-21 22:35:38.151 -05 000000085 INF: Y Motor: Recv 1D\r\n 15-12-21 22:35:38.151 -05 000000024 INF: FPGA: Recv ZYT 15-12-21 22:35:38.153 -05 000000090 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:35:38.153 -05 000000090 INF: FPGA: Xmit ZMV 45368\n 15-12-21 22:35:38.154 -05 000000063 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:35:38.154 -05 000000063 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:35:38.154 -05 000000063 INF: X Motor: Moving to 80.2570 mm @15.000 mm/sec, started at 76.7344 mm 15-12-21 22:35:38.154 -05 000000085 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:35:38.156 -05 000000063 INF: X Motor: Xmit MA 8707\n 15-12-21 22:35:38.158 -05 000000085 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:35:38.204 -05 000000049 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 22:35:38.204 -05 000000049 INF: FPGA: Recv ZMV 15-12-21 22:35:38.204 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 22:35:38.204 -05 000000090 INF: Z Motor: MoveAndTrigger 'ZMV' command took 51.1724 ms 15-12-21 22:35:38.204 -05 000000090 INF: FPGA: Xmit ZDACR\n 15-12-21 22:35:38.206 -05 000000063 INF: X Motor: Recv MA 8707\r\n> 15-12-21 22:35:38.206 -05 000000063 INF: X Motor: WaitUntilStopped 60235 15-12-21 22:35:38.275 -05 000000055 INF: FPGA: Recv ZDACR 45368 15-12-21 22:35:38.275 -05 000000090 INF: Z Motor: MoveAndTrigger took 246.9868 ms w/comms 15-12-21 22:35:38.275 -05 000000090 INF: Z Motor: After move to -0.1731, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:35:38.275 -05 000000090 INF: Z Motor: MoveAbsStepped took 247.0848 ms 15-12-21 22:35:38.276 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:35:38.314 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:35:38.330 -05 000000068 INF: ===================Camera Arm TDI=================== 15-12-21 22:35:38.330 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:35:38.331 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:38.367 -05 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:35:38.368 -05 000000082 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:35:38.368 -05 000000082 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:35:38.410 -05 000000055 INF: FPGA: Recv ZSEL 15-12-21 22:35:38.410 -05 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:35:38.411 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:38.418 -05 000000082 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:35:38.419 -05 000000082 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:35:38.419 -05 000000082 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:35:38.439 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:38.439 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:38.439 -05 000000057 INF: WaitCommand(5000) end 15-12-21 22:35:38.439 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:38.441 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:38.441 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:38.442 -05 000000078 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:35:38.443 -05 000000056 INF: ===================WaitCommand=================== 15-12-21 22:35:38.443 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:38.443 -05 000000056 INF: WaitCommand(15000) start 15-12-21 22:35:38.443 -05 000000056 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:35:38.469 -05 000000055 INF: FPGA: Recv ZSTEP 15-12-21 22:35:38.470 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:38.474 -05 000000082 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:35:38.474 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:38.477 -05 000000082 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:35:38.477 -05 000000082 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:35:38.477 -05 000000082 INF: Z Motor: Arming to move to -0.1331 mm 15-12-21 22:35:38.477 -05 000000082 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:35:38.534 -05 000000095 INF: FPGA: Recv ZYT 15-12-21 22:35:38.534 -05 000000082 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907643 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:35:38.534 -05 000000082 INF: FPGA: Xmit ZARM 34882\n 15-12-21 22:35:38.537 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:38.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:38.641 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:38.642 -05 000000024 INF: FPGA: Recv ZARM 15-12-21 22:35:38.642 -05 000000082 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 107.7891 ms 15-12-21 22:35:38.642 -05 000000082 INF: Z Motor: ArmAbsStepped took 164.5474 ms 15-12-21 22:35:38.643 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:35:38.644 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:38.644 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:38.645 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:35:38.656 -05 000000082 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:35:38.656 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:35:38.661 -05 000000082 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:35:38.661 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:35:38.663 -05 000000082 INF: ====================================== 15-12-21 22:35:38.704 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:38.757 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:38.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:38.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:38.804 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:35:38.854 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 22:35:38.854 -05 000000078 INF: Current Position of Pump is: 4608 15-12-21 22:35:38.854 -05 000000078 INF: Dispense Steps 48000 is greater than steps to home syringe 4608, reducing number of steps to 4608 15-12-21 22:35:38.854 -05 000000078 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:35:38.915 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:38.962 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD4608R\r 15-12-21 22:35:38.972 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:38.972 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:39.050 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:39.051 -05 000000063 INF: X Motor: Xmit PR ER\n 15-12-21 22:35:39.138 -05 000000063 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:35:39.138 -05 000000063 INF: X Motor: Moved to 80.2573 after 932 ms 15-12-21 22:35:39.139 -05 000000063 INF: ====================================== 15-12-21 22:35:39.150 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:39.241 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:39.443 -05 000000056 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:35:39.491 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:39.492 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:39.608 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:39.609 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.308C:A1\r\n 15-12-21 22:35:39.609 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:39.886 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:39.990 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:39.990 -05 000000078 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:35:39.990 -05 000000078 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:35:40.047 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:40.110 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:35:40.110 -05 000000068 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:35:40.111 -05 000000068 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:35:40.111 -05 000000068 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:35:40.113 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.022C:A1\r\n 15-12-21 22:35:40.113 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:40.171 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:40.282 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:40.361 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:40.424 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:40.443 -05 000000056 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:35:40.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:40.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:40.611 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:40.617 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:40.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:40.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:40.703 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:40.704 -05 000000078 INF: ====================================== 15-12-21 22:35:40.774 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:40.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:40.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:41.444 -05 000000056 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:35:41.633 -05 000000068 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:35:41.633 -05 000000068 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:35:41.633 -05 000000068 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:35:41.635 -05 000000068 INF: ====================================== 15-12-21 22:35:41.637 -05 000000090 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:35:41.646 -05 000000090 INF: ====================================== 15-12-21 22:35:42.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:42.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:42.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:42.187 -05 000000085 INF: Y Motor: Moved to 70.6885 after 4029 ms 15-12-21 22:35:42.188 -05 000000085 INF: ====================================== 15-12-21 22:35:42.194 -05 000000080 INF: ===================Move X,Y=================== 15-12-21 22:35:42.200 -05 000000080 INF: ====================================== 15-12-21 22:35:42.202 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:35:42.210 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:42.210 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:35:42.291 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:42.309 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:35:42.310 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 22:35:42.310 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:42.310 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:35:42.371 -05 000000080 INF: FPGA: Recv ZFREQCL 15-12-21 22:35:42.372 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:35:42.372 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:42.372 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:35:42.416 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:42.433 -05 000000095 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:35:42.433 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:35:42.434 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:35:42.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:42.435 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:42.435 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:35:42.443 -05 000000024 INF: ===================TDI FPGA Arm=================== 15-12-21 22:35:42.443 -05 000000063 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:35:42.444 -05 000000056 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:35:42.444 -05 000000063 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:35:42.449 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:35:42.454 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:35:42.456 -05 000000024 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:35:42.495 -05 000000055 INF: FPGA: Recv TDIYPOS 15-12-21 22:35:42.501 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:35:42.501 -05 000000063 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:35:42.502 -05 000000063 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:35:42.502 -05 000000063 INF: ====================================== 15-12-21 22:35:42.506 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:35:42.506 -05 000000024 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:35:42.549 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:42.557 -05 000000078 INF: FPGA: Recv TDIYARM3 15-12-21 22:35:42.558 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:35:42.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:42.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:42.564 -05 000000024 INF: ===================TDI FPGA Arm=================== 15-12-21 22:35:42.610 -05 000000024 INF: ====================================== 15-12-21 22:35:42.613 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:35:42.615 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:35:42.615 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:42.616 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:42.617 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:42.620 -05 000000081 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:35:42.620 -05 000000081 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:35:42.620 -05 000000081 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:35:42.620 -05 000000081 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:35:42.621 -05 000000081 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:35:42.627 -05 000000063 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:35:42.628 -05 000000063 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:35:42.628 -05 000000063 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:35:42.628 -05 000000063 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:35:42.630 -05 000000063 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:35:42.851 -05 000000055 INF: FPGA: Recv EX1MV 15-12-21 22:35:42.851 -05 000000081 INF: Excitation Filter 1: Moved -36 steps in 230.4056 ms 15-12-21 22:35:42.851 -05 000000081 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 230.5829 ms 15-12-21 22:35:42.851 -05 000000081 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 230.7193 ms 15-12-21 22:35:42.853 -05 000000081 INF: ====================================== 15-12-21 22:35:43.058 -05 000000095 INF: FPGA: Recv EX2MV 15-12-21 22:35:43.058 -05 000000063 INF: Excitation Filter 2: Moved -107 steps in 429.7827 ms 15-12-21 22:35:43.058 -05 000000063 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 430.0188 ms 15-12-21 22:35:43.059 -05 000000063 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 430.5395 ms 15-12-21 22:35:43.059 -05 000000063 INF: ====================================== 15-12-21 22:35:43.061 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:43.067 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:35:43.071 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:35:43.071 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:35:43.071 -05 000000079 INF: ===================Move Y Motor without settling=================== 15-12-21 22:35:43.072 -05 000000079 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:35:43.072 -05 000000079 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:35:43.104 -05 000000079 INF: Y Motor: Xmit 1G\n 15-12-21 22:35:43.104 -05 000000055 INF: ===================FPGA Z Wait=================== 15-12-21 22:35:43.104 -05 000000055 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:35:43.109 -05 000000049 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:35:43.109 -05 000000080 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:35:43.113 -05 000000049 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:35:43.115 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:35:43.115 -05 000000082 INF: ===================Camera TDI=================== 15-12-21 22:35:43.125 -05 000000079 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:35:43.126 -05 000000079 INF: Y Motor: Recv 1G\r\n 15-12-21 22:35:43.127 -05 000000079 INF: Y Motor: Xmit 1D\n 15-12-21 22:35:43.183 -05 000000079 INF: Y Motor: Recv 1D\r\n 15-12-21 22:35:43.185 -05 000000079 INF: Y Motor: Recv *407662\r\n 15-12-21 22:35:43.186 -05 000000079 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:35:43.430 -05 000000029 INF: FPGA: Recv ZWAIT 15-12-21 22:35:43.431 -05 000000055 INF: ====================================== 15-12-21 22:35:43.444 -05 000000056 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:35:43.570 -05 000000082 INF: ===================Frame #2=================== 15-12-21 22:35:43.575 -05 000000024 INF: ===================Frame #2=================== 15-12-21 22:35:43.594 -05 000000071 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1207=================== 15-12-21 22:35:43.637 -05 000000094 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206=================== 15-12-21 22:35:43.657 -05 000000011 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1209=================== 15-12-21 22:35:43.657 -05 000000066 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1209, Registering and Extracting C040 L001 T1210=================== 15-12-21 22:35:43.712 -05 000000074 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1209=================== 15-12-21 22:35:43.725 -05 000000082 INF: ===================Frame #14=================== 15-12-21 22:35:43.729 -05 000000024 INF: ===================Frame #15=================== 15-12-21 22:35:43.753 -05 000000075 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206=================== 15-12-21 22:35:43.757 -05 000000038 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1211=================== 15-12-21 22:35:43.757 -05 000000077 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1211, Registering and Extracting C040 L001 T1212=================== 15-12-21 22:35:43.779 -05 000000065 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1211=================== 15-12-21 22:35:43.852 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:43.857 -05 000000040 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1211, Registering and Extracting C040 L001 T1213=================== 15-12-21 22:35:43.870 -05 000000060 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1211=================== 15-12-21 22:35:43.872 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:43.872 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:43.880 -05 000000024 INF: ===================Frame #26=================== 15-12-21 22:35:43.904 -05 000000082 INF: ===================Frame #28=================== 15-12-21 22:35:43.911 -05 000000009 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206=================== 15-12-21 22:35:43.958 -05 000000051 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1214, Registering and Extracting C040 L001 T1215=================== 15-12-21 22:35:43.958 -05 000000027 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1214, Registering and Extracting C040 L001 T1215=================== 15-12-21 22:35:43.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:43.998 -05 000000089 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1214=================== 15-12-21 22:35:44.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:44.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:44.059 -05 000000048 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1214, Registering and Extracting C040 L001 T1216=================== 15-12-21 22:35:44.101 -05 000000024 INF: ===================Frame #44=================== 15-12-21 22:35:44.101 -05 000000082 INF: ===================Frame #44=================== 15-12-21 22:35:44.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:44.251 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:44.251 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:44.393 -05 000000082 INF: ===================Frame #67=================== 15-12-21 22:35:44.393 -05 000000024 INF: ===================Frame #67=================== 15-12-21 22:35:44.444 -05 000000056 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:35:44.543 -05 000000024 INF: ===================Frame #79=================== 15-12-21 22:35:44.543 -05 000000082 INF: ===================Frame #79=================== 15-12-21 22:35:44.693 -05 000000024 INF: ===================Frame #91=================== 15-12-21 22:35:44.694 -05 000000082 INF: ===================Frame #91=================== 15-12-21 22:35:44.742 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:44.791 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.848C:A1\r\n 15-12-21 22:35:44.791 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:44.863 -05 000000024 INF: ===================Frame #104=================== 15-12-21 22:35:44.863 -05 000000082 INF: ===================Frame #104=================== 15-12-21 22:35:45.234 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:45.257 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.616C:A1\r\n 15-12-21 22:35:45.257 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:45.466 -05 000000056 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:35:45.581 -05 000000082 INF: ===================Frame #161=================== 15-12-21 22:35:45.583 -05 000000024 INF: ===================Frame #161=================== 15-12-21 22:35:45.593 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:45.648 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:45.648 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:45.751 -05 000000024 INF: ===================Frame #174=================== 15-12-21 22:35:45.751 -05 000000082 INF: ===================Frame #174=================== 15-12-21 22:35:45.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:45.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:45.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:45.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:46.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:46.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:46.468 -05 000000056 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:35:46.510 -05 000000082 INF: ===================Frame #235=================== 15-12-21 22:35:46.515 -05 000000024 INF: ===================Frame #235=================== 15-12-21 22:35:46.660 -05 000000082 INF: ===================Frame #246=================== 15-12-21 22:35:46.665 -05 000000024 INF: ===================Frame #247=================== 15-12-21 22:35:46.816 -05 000000024 INF: ===================Frame #259=================== 15-12-21 22:35:46.966 -05 000000024 INF: ===================Frame #271=================== 15-12-21 22:35:47.012 -05 000000082 INF: ===================Frame #274=================== 15-12-21 22:35:47.118 -05 000000024 INF: ===================Frame #283=================== 15-12-21 22:35:47.268 -05 000000024 INF: ===================Frame #294=================== 15-12-21 22:35:47.280 -05 000000082 INF: ===================Frame #295=================== 15-12-21 22:35:47.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:47.317 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:47.317 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:47.419 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:47.431 -05 000000082 INF: ===================Frame #307=================== 15-12-21 22:35:47.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:47.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:47.468 -05 000000056 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:35:47.549 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:47.566 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:35:47.566 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:47.582 -05 000000082 INF: ===================Frame #319=================== 15-12-21 22:35:47.667 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:47.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:47.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:47.733 -05 000000082 INF: ===================Frame #331=================== 15-12-21 22:35:47.762 -05 000000024 INF: ===================Frame #334=================== 15-12-21 22:35:47.893 -05 000000082 INF: ===================Frame #343=================== 15-12-21 22:35:48.045 -05 000000082 INF: ===================Frame #356=================== 15-12-21 22:35:48.079 -05 000000024 INF: ===================Frame #358=================== 15-12-21 22:35:48.312 -05 000000024 INF: ===================Frame #377=================== 15-12-21 22:35:48.408 -05 000000082 INF: ===================Frame #385=================== 15-12-21 22:35:48.462 -05 000000024 INF: ===================Frame #389=================== 15-12-21 22:35:48.469 -05 000000056 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:35:48.559 -05 000000082 INF: ===================Frame #396=================== 15-12-21 22:35:48.613 -05 000000024 INF: ===================Frame #401=================== 15-12-21 22:35:48.753 -05 000000082 INF: ===================Frame #412=================== 15-12-21 22:35:48.763 -05 000000024 INF: ===================Frame #413=================== 15-12-21 22:35:48.845 -05 000000038 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206, Registering and Extracting C040 L001 T1214=================== 15-12-21 22:35:48.906 -05 000000066 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205, Registering and Extracting C040 L001 T1206=================== 15-12-21 22:35:48.913 -05 000000024 INF: ===================Frame #425=================== 15-12-21 22:35:48.923 -05 000000082 INF: ===================Frame #425=================== 15-12-21 22:35:48.999 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:49.048 -05 000000051 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204, Registering and Extracting C040 L001 T1205=================== 15-12-21 22:35:49.064 -05 000000024 INF: ===================Frame #436=================== 15-12-21 22:35:49.073 -05 000000082 INF: ===================Frame #437=================== 15-12-21 22:35:49.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:49.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:49.181 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:49.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:49.205 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:49.223 -05 000000082 INF: ===================Frame #449=================== 15-12-21 22:35:49.294 -05 000000024 INF: ===================Frame #455=================== 15-12-21 22:35:49.309 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:49.314 -05 000000077 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203, Registering and Extracting C040 L001 T1204=================== 15-12-21 22:35:49.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:49.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:49.374 -05 000000082 INF: ===================Frame #461=================== 15-12-21 22:35:49.445 -05 000000024 INF: ===================Frame #467=================== 15-12-21 22:35:49.470 -05 000000056 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:35:49.481 -05 000000011 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202, Registering and Extracting C040 L001 T1203=================== 15-12-21 22:35:49.524 -05 000000082 INF: ===================Frame #473=================== 15-12-21 22:35:49.531 -05 000000040 INF: ===================Registering and Extracting C040 L001 T1201, Registering and Extracting C040 L001 T1202=================== 15-12-21 22:35:49.597 -05 000000024 INF: ===================Frame #479=================== 15-12-21 22:35:49.626 -05 000000027 INF: ===================Registering and Extracting C040 L001 T1201=================== 15-12-21 22:35:49.639 -05 000000048 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:35:49.675 -05 000000082 INF: ===================Frame #485=================== 15-12-21 22:35:49.699 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:49.707 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:35:49.748 -05 000000024 INF: ===================Frame #491=================== 15-12-21 22:35:49.800 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:49.806 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:35:49.825 -05 000000082 INF: ===================Frame #497=================== 15-12-21 22:35:49.898 -05 000000024 INF: ===================Frame #502=================== 15-12-21 22:35:49.954 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:49.976 -05 000000082 INF: ===================Frame #509=================== 15-12-21 22:35:49.988 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:49.996 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:35:50.017 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.557C:A1\r\n 15-12-21 22:35:50.017 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:50.101 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:50.107 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:35:50.127 -05 000000082 INF: ===================Frame #521=================== 15-12-21 22:35:50.132 -05 000000024 INF: ===================Frame #521=================== 15-12-21 22:35:50.217 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:35:50.277 -05 000000082 INF: ===================Frame #532=================== 15-12-21 22:35:50.282 -05 000000024 INF: ===================Frame #533=================== 15-12-21 22:35:50.399 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:50.433 -05 000000024 INF: ===================Frame #545=================== 15-12-21 22:35:50.471 -05 000000056 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:35:50.583 -05 000000024 INF: ===================Frame #557=================== 15-12-21 22:35:50.608 -05 000000082 INF: ===================Frame #559=================== 15-12-21 22:35:50.683 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:50.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:50.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:50.733 -05 000000024 INF: ===================Frame #568=================== 15-12-21 22:35:50.758 -05 000000082 INF: ===================Frame #570=================== 15-12-21 22:35:50.812 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:50.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:50.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:50.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:50.998 -05 000000082 INF: ===================Frame #589=================== 15-12-21 22:35:51.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:51.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:51.018 -05 000000024 INF: ===================Frame #591=================== 15-12-21 22:35:51.083 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:35:51.148 -05 000000082 INF: ===================Frame #601=================== 15-12-21 22:35:51.168 -05 000000024 INF: ===================Frame #603=================== 15-12-21 22:35:51.298 -05 000000082 INF: ===================Frame #613=================== 15-12-21 22:35:51.318 -05 000000024 INF: ===================Frame #615=================== 15-12-21 22:35:51.448 -05 000000082 INF: ===================Frame #625=================== 15-12-21 22:35:51.468 -05 000000024 INF: ===================Frame #626=================== 15-12-21 22:35:51.471 -05 000000056 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:35:51.598 -05 000000082 INF: ===================Frame #637=================== 15-12-21 22:35:51.696 -05 000000024 INF: ===================Frame #645=================== 15-12-21 22:35:51.748 -05 000000082 INF: ===================Frame #649=================== 15-12-21 22:35:51.846 -05 000000024 INF: ===================Frame #656=================== 15-12-21 22:35:51.898 -05 000000082 INF: ===================Frame #661=================== 15-12-21 22:35:52.032 -05 000000024 INF: ===================Frame #671=================== 15-12-21 22:35:52.048 -05 000000082 INF: ===================Frame #672=================== 15-12-21 22:35:52.182 -05 000000024 INF: ===================Frame #683=================== 15-12-21 22:35:52.240 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:52.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:52.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:52.329 -05 000000082 INF: ===================Frame #695=================== 15-12-21 22:35:52.332 -05 000000024 INF: ===================Frame #695=================== 15-12-21 22:35:52.368 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:52.388 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:52.388 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:52.471 -05 000000056 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:35:52.479 -05 000000082 INF: ===================Frame #706=================== 15-12-21 22:35:52.482 -05 000000024 INF: ===================Frame #707=================== 15-12-21 22:35:52.491 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:52.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:52.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:52.632 -05 000000024 INF: ===================Frame #719=================== 15-12-21 22:35:52.667 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:52.678 -05 000000082 INF: ===================Frame #722=================== 15-12-21 22:35:52.698 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 22:35:52.698 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:52.782 -05 000000024 INF: ===================Frame #730=================== 15-12-21 22:35:52.850 -05 000000082 INF: ===================Frame #736=================== 15-12-21 22:35:53.030 -05 000000082 INF: ===================Frame #750=================== 15-12-21 22:35:53.038 -05 000000024 INF: ===================Frame #751=================== 15-12-21 22:35:53.188 -05 000000024 INF: ===================Frame #762=================== 15-12-21 22:35:53.207 -05 000000082 INF: ===================Frame #764=================== 15-12-21 22:35:53.387 -05 000000082 INF: ===================Frame #778=================== 15-12-21 22:35:53.396 -05 000000024 INF: ===================Frame #779=================== 15-12-21 22:35:53.443 -05 000000056 INF: ===================WaitCommand=================== 15-12-21 22:35:53.443 -05 000000056 INF: WaitCommand(15000) end 15-12-21 22:35:53.443 -05 000000056 INF: ====================================== 15-12-21 22:35:53.445 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:53.448 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:53.449 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:35:53.449 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle=================== 15-12-21 22:35:53.450 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:35:53.451 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:35:53.454 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:35:53.454 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:53.513 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:53.514 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent CWM (8)=================== 15-12-21 22:35:53.515 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:35:53.515 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:35:53.515 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:35:53.547 -05 000000024 INF: ===================Frame #791=================== 15-12-21 22:35:53.556 -05 000000082 INF: ===================Frame #792=================== 15-12-21 22:35:53.573 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:35:53.573 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:53.726 -05 000000024 INF: ===================Frame #805=================== 15-12-21 22:35:53.736 -05 000000082 INF: ===================Frame #806=================== 15-12-21 22:35:53.878 -05 000000024 INF: ===================Frame #817=================== 15-12-21 22:35:54.018 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:35:54.028 -05 000000024 INF: ===================Frame #829=================== 15-12-21 22:35:54.124 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:35:54.124 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:54.179 -05 000000024 INF: ===================Frame #841=================== 15-12-21 22:35:54.233 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:54.304 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:54.304 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:54.330 -05 000000024 INF: ===================Frame #853=================== 15-12-21 22:35:54.342 -05 000000082 INF: ===================Frame #854=================== 15-12-21 22:35:54.404 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:35:54.430 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:35:54.430 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:54.481 -05 000000024 INF: ===================Frame #865=================== 15-12-21 22:35:54.532 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:54.532 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:35:54.533 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:35:54.554 -05 000000082 INF: ===================Frame #870=================== 15-12-21 22:35:54.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:54.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:54.613 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:54.632 -05 000000024 INF: ===================Frame #877=================== 15-12-21 22:35:54.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:54.664 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:54.670 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 8, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:35:54.681 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:54.681 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:54.721 -05 000000082 INF: ===================Frame #884=================== 15-12-21 22:35:54.765 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:35:54.785 -05 000000024 INF: ===================Frame #889=================== 15-12-21 22:35:54.849 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:35:54.849 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 22:35:54.849 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:35:54.890 -05 000000082 INF: ===================Frame #897=================== 15-12-21 22:35:54.935 -05 000000024 INF: ===================Frame #901=================== 15-12-21 22:35:54.950 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P18240R\r 15-12-21 22:35:55.037 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:55.040 -05 000000082 INF: ===================Frame #909=================== 15-12-21 22:35:55.086 -05 000000024 INF: ===================Frame #913=================== 15-12-21 22:35:55.120 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:35:55.137 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:55.178 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.185C:A1\r\n 15-12-21 22:35:55.178 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:55.191 -05 000000082 INF: ===================Frame #921=================== 15-12-21 22:35:55.224 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:55.236 -05 000000024 INF: ===================Frame #924=================== 15-12-21 22:35:55.343 -05 000000082 INF: ===================Frame #933=================== 15-12-21 22:35:55.474 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:55.493 -05 000000082 INF: ===================Frame #945=================== 15-12-21 22:35:55.538 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:55.554 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:35:55.572 -05 000000024 INF: ===================Frame #951=================== 15-12-21 22:35:55.616 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.886C:A1\r\n 15-12-21 22:35:55.616 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:55.644 -05 000000082 INF: ===================Frame #957=================== 15-12-21 22:35:55.722 -05 000000024 INF: ===================Frame #963=================== 15-12-21 22:35:55.788 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:55.794 -05 000000082 INF: ===================Frame #969=================== 15-12-21 22:35:55.848 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:55.874 -05 000000024 INF: ===================Frame #975=================== 15-12-21 22:35:55.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:55.929 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:55.929 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:55.944 -05 000000082 INF: ===================Frame #980=================== 15-12-21 22:35:56.024 -05 000000024 INF: ===================Frame #987=================== 15-12-21 22:35:56.029 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:56.051 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:56.051 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:56.098 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:56.154 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:56.161 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:56.175 -05 000000024 INF: ===================Frame #999=================== 15-12-21 22:35:56.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:56.177 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:56.207 -05 000000082 INF: ===================Frame #1001=================== 15-12-21 22:35:56.326 -05 000000024 INF: ===================Frame #1011=================== 15-12-21 22:35:56.357 -05 000000082 INF: ===================Frame #1013=================== 15-12-21 22:35:56.411 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:56.474 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:56.477 -05 000000024 INF: ===================Frame #1023=================== 15-12-21 22:35:56.507 -05 000000082 INF: ===================Frame #1025=================== 15-12-21 22:35:56.628 -05 000000024 INF: ===================Frame #1034=================== 15-12-21 22:35:56.657 -05 000000082 INF: ===================Frame #1037=================== 15-12-21 22:35:56.724 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:56.784 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:56.807 -05 000000082 INF: ===================Frame #1049=================== 15-12-21 22:35:56.913 -05 000000024 INF: ===================Frame #1057=================== 15-12-21 22:35:56.957 -05 000000082 INF: ===================Frame #1060=================== 15-12-21 22:35:57.036 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:57.065 -05 000000024 INF: ===================Frame #1069=================== 15-12-21 22:35:57.098 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:57.196 -05 000000082 INF: ===================Frame #1079=================== 15-12-21 22:35:57.215 -05 000000024 INF: ===================Frame #1081=================== 15-12-21 22:35:57.347 -05 000000082 INF: ===================Frame #1091=================== 15-12-21 22:35:57.348 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:57.365 -05 000000024 INF: ===================Frame #1093=================== 15-12-21 22:35:57.405 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:57.409 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:57.425 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:57.425 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:57.498 -05 000000082 INF: ===================Frame #1103=================== 15-12-21 22:35:57.516 -05 000000024 INF: ===================Frame #1105=================== 15-12-21 22:35:57.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:57.551 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:57.551 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:57.648 -05 000000082 INF: ===================Frame #1115=================== 15-12-21 22:35:57.656 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:57.659 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:57.666 -05 000000024 INF: ===================Frame #1117=================== 15-12-21 22:35:57.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:57.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:57.720 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:57.798 -05 000000082 INF: ===================Frame #1127=================== 15-12-21 22:35:57.802 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:35:57.816 -05 000000024 INF: ===================Frame #1128=================== 15-12-21 22:35:57.862 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 22:35:57.862 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:57.949 -05 000000082 INF: ===================Frame #1139=================== 15-12-21 22:35:57.970 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:58.033 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:58.071 -05 000000024 INF: ===================Frame #1149=================== 15-12-21 22:35:58.100 -05 000000082 INF: ===================Frame #1151=================== 15-12-21 22:35:58.221 -05 000000024 INF: ===================Frame #1160=================== 15-12-21 22:35:58.250 -05 000000082 INF: ===================Frame #1163=================== 15-12-21 22:35:58.283 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:58.346 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:58.400 -05 000000082 INF: ===================Frame #1175=================== 15-12-21 22:35:58.405 -05 000000024 INF: ===================Frame #1175=================== 15-12-21 22:35:58.550 -05 000000082 INF: ===================Frame #1186=================== 15-12-21 22:35:58.555 -05 000000024 INF: ===================Frame #1187=================== 15-12-21 22:35:58.596 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:58.657 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:58.705 -05 000000024 INF: ===================Frame #1199=================== 15-12-21 22:35:58.821 -05 000000082 INF: ===================Frame #1208=================== 15-12-21 22:35:58.855 -05 000000024 INF: ===================Frame #1211=================== 15-12-21 22:35:58.902 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:35:58.907 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:58.924 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:35:58.924 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:58.970 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:58.991 -05 000000082 INF: ===================Frame #1221=================== 15-12-21 22:35:59.005 -05 000000024 INF: ===================Frame #1222=================== 15-12-21 22:35:59.027 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:35:59.048 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:59.048 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:59.141 -05 000000082 INF: ===================Frame #1233=================== 15-12-21 22:35:59.151 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:35:59.171 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:35:59.171 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:35:59.217 -05 000000024 INF: ===================Frame #1239=================== 15-12-21 22:35:59.220 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:59.281 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:35:59.281 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:35:59.292 -05 000000082 INF: ===================Frame #1245=================== 15-12-21 22:35:59.367 -05 000000024 INF: ===================Frame #1250=================== 15-12-21 22:35:59.382 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:35:59.393 -05 000000024 INF: Camera complete - got 1250 frames. 15-12-21 22:35:59.394 -05 000000024 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:35:59.403 -05 000000028 INF: FPGA: Recv TDIYWAIT 15-12-21 22:35:59.403 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:35:59.411 -05 000000049 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:35:59.413 -05 000000078 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:35:59.413 -05 000000078 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:35:59.413 -05 000000078 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:35:59.413 -05 000000078 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:35:59.413 -05 000000078 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:35:59.417 -05 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:35:59.417 -05 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:35:59.418 -05 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:35:59.418 -05 000000090 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:35:59.418 -05 000000090 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:35:59.469 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 22:35:59.469 -05 000000057 INF: Current Position of Pump is: 18240 15-12-21 22:35:59.469 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:35:59.520 -05 000000082 INF: ===================Frame #1250=================== 15-12-21 22:35:59.521 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:35:59.548 -05 000000024 INF: ====================================== 15-12-21 22:35:59.568 -05 000000082 INF: Camera complete - got 1250 frames. 15-12-21 22:35:59.569 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:35:59.570 -05 000000082 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:35:59.591 -05 000000085 INF: FPGA: Recv EX1MV 15-12-21 22:35:59.591 -05 000000078 INF: Excitation Filter 1: Moved 36 steps in 177.8521 ms 15-12-21 22:35:59.591 -05 000000078 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 177.942 ms 15-12-21 22:35:59.591 -05 000000078 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 178.0216 ms 15-12-21 22:35:59.591 -05 000000078 INF: ====================================== 15-12-21 22:35:59.656 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:59.688 -05 000000082 INF: ===================Camera TDI=================== 15-12-21 22:35:59.715 -05 000000082 INF: ====================================== 15-12-21 22:35:59.719 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:35:59.720 -05 000000080 INF: ====================================== 15-12-21 22:35:59.756 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:35:59.841 -05 000000063 INF: FPGA: Recv EX2MV 15-12-21 22:35:59.841 -05 000000090 INF: Excitation Filter 2: Moved 107 steps in 423.4718 ms 15-12-21 22:35:59.841 -05 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 423.5795 ms 15-12-21 22:35:59.841 -05 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 423.6723 ms 15-12-21 22:35:59.842 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:35:59.844 -05 000000090 INF: ====================================== 15-12-21 22:35:59.848 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:35:59.850 -05 000000049 INF: ====================================== 15-12-21 22:36:00.094 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:00.184 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:00.184 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:00.185 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:36:00.185 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:00.186 -05 000000079 INF: Y Motor: Moved to 9.0765 after 17001 ms 15-12-21 22:36:00.186 -05 000000079 INF: ====================================== 15-12-21 22:36:00.187 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:00.190 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:00.196 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.196 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:36:00.205 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:36:00.205 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:00.248 -05 000000082 INF: FPGA: Recv TDICLINES 10244 15-12-21 22:36:00.248 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:36:00.326 -05 000000079 INF: FPGA: Recv TDIYERD 907649 15-12-21 22:36:00.326 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:36:00.387 -05 000000068 INF: FPGA: Recv ZADCR 38879 15-12-21 22:36:00.387 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.148. Y moved -60.304 mm 15-12-21 22:36:00.387 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:36:00.449 -05 000000078 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:36:00.449 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:36:00.449 -05 000000062 INF: TDIScan finished after 22443.2435 ms 15-12-21 22:36:00.450 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:36:00.450 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:36:00.453 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.482 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.069 um 15-12-21 22:36:00.484 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.486 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.487 -05 000000029 INF: ===================Dither Clean Up Command=================== 15-12-21 22:36:00.488 -05 000000080 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:36:00.488 -05 000000079 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:36:00.488 -05 000000080 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:36:00.488 -05 000000022 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:36:00.488 -05 000000049 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:00.489 -05 000000063 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:36:00.490 -05 000000022 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:36:00.490 -05 000000022 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:36:00.491 -05 000000049 INF: ===================LFT:Extracting coords=================== 15-12-21 22:36:00.497 -05 000000063 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:36:00.511 -05 000000028 INF: FPGA: Recv ZSTEP 15-12-21 22:36:00.511 -05 000000028 INF: FPGA: Recv ZSEL 15-12-21 22:36:00.511 -05 000000063 INF: FPGA: Xmit ZDACW 45368\n 15-12-21 22:36:00.512 -05 000000022 INF: ====================================== 15-12-21 22:36:00.542 -05 000000049 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:00.543 -05 000000049 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:36:00.545 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:00.545 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:00.545 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:00.545 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:00.546 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:00.546 -05 000000024 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:00.562 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:00.562 -05 000000082 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:00.605 -05 000000068 INF: FPGA: Recv ZDACW 15-12-21 22:36:00.609 -05 000000080 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:36:00.609 -05 000000063 INF: ====================================== 15-12-21 22:36:00.610 -05 000000080 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:36:00.610 -05 000000079 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:36:00.610 -05 000000080 INF: ====================================== 15-12-21 22:36:00.655 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:36:00.670 -05 000000079 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:36:00.671 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:00.671 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:00.671 -05 000000079 INF: ====================================== 15-12-21 22:36:00.747 -05 000000090 INF: LFT found best fwhm score 2.334433 in 138 ms 15-12-21 22:36:00.747 -05 000000090 INF: LFT found good score at index 4057 with fwhm value 2.334433. Next cycle, cycle 41 starting Z position for top surface is at -0.176 mm FC:B, C:40,L:2,T 15-12-21 22:36:00.747 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:00.748 -05 000000090 INF: ====================================== 15-12-21 22:36:00.761 -05 000000082 INF: LFT found best fwhm score 2.505081 in 135 ms 15-12-21 22:36:00.761 -05 000000082 INF: LFT found good score at index 8177 with fwhm value 2.505081. Next cycle, cycle 41 starting Z position for top surface is at -0.175 mm FC:B, C:40,L:2,T 15-12-21 22:36:00.762 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:00.762 -05 000000082 INF: ====================================== 15-12-21 22:36:00.778 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:00.796 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:00.796 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:00.807 -05 000000078 INF: LFT found best fwhm score 2.655763 in 203 ms 15-12-21 22:36:00.807 -05 000000078 INF: LFT found good score at index 8541 with fwhm value 2.655763. Next cycle, cycle 41 starting Z position for top surface is at -0.175 mm FC:B, C:40,L:2,T 15-12-21 22:36:00.808 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:00.808 -05 000000024 INF: LFT found best fwhm score 2.590748 in 203 ms 15-12-21 22:36:00.808 -05 000000024 INF: LFT found good score at index 2265 with fwhm value 2.590748. Next cycle, cycle 41 starting Z position for top surface is at -0.176 mm FC:B, C:40,L:2,T 15-12-21 22:36:00.808 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:00.808 -05 000000078 INF: ====================================== 15-12-21 22:36:00.809 -05 000000024 INF: ====================================== 15-12-21 22:36:00.813 -05 000000049 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:00.816 -05 000000049 INF: LFT weighted average best Z for top surface is at -0.175mm FC:B, C:40,L:2,T 15-12-21 22:36:00.816 -05 000000049 INF: ====================================== 15-12-21 22:36:00.820 -05 000000029 INF: ====================================== 15-12-21 22:36:00.822 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.825 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:36:00.825 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.825 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:36:00.826 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.826 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:36:00.826 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.826 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:36:00.826 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.827 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:36:00.827 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:36:00.829 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve, Waiting for image analysis=================== 15-12-21 22:36:00.829 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:36:00.829 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:36:00.829 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:36:00.829 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:36:00.830 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:36:00.830 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:36:00.830 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:00.832 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:36:00.833 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:36:00.846 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.846 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:36:00.846 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:00.847 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -173.1 um, section = B_1 15-12-21 22:36:00.849 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:00.850 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:00.851 -05 000000063 INF: ===================Move X,Y=================== 15-12-21 22:36:00.851 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:00.852 -05 000000079 INF: ===================MoveEmissionFilters=================== 15-12-21 22:36:00.852 -05 000000063 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:36:00.852 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:36:00.852 -05 000000081 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:36:00.855 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:00.856 -05 000000068 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:36:00.856 -05 000000078 INF: ===================Move X Motor without settling=================== 15-12-21 22:36:00.856 -05 000000023 INF: ===================Move Y Motor without settling=================== 15-12-21 22:36:00.856 -05 000000024 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:36:00.856 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:36:00.856 -05 000000049 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:36:00.861 -05 000000078 INF: X Motor: Xmit PR VM\n 15-12-21 22:36:00.863 -05 000000023 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:36:00.866 -05 000000023 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:36:00.866 -05 000000068 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:36:00.869 -05 000000023 INF: Y Motor: Xmit 1G\n 15-12-21 22:36:00.869 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:36:00.869 -05 000000024 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:36:00.869 -05 000000049 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:36:00.872 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:36:00.877 -05 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:36:00.880 -05 000000080 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:00.880 -05 000000029 INF: ===================Camera Arm TDI=================== 15-12-21 22:36:00.884 -05 000000028 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:36:00.884 -05 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:36:00.884 -05 000000082 INF: ====================================== 15-12-21 22:36:00.892 -05 000000028 INF: ====================================== 15-12-21 22:36:00.892 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:00.895 -05 000000090 INF: ====================================== 15-12-21 22:36:00.902 -05 000000080 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:36:00.905 -05 000000080 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:36:00.905 -05 000000082 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:36:00.907 -05 000000080 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:36:00.908 -05 000000028 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:36:00.908 -05 000000082 INF: ====================================== 15-12-21 22:36:00.908 -05 000000028 INF: ====================================== 15-12-21 22:36:00.908 -05 000000068 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:36:00.915 -05 000000068 INF: ====================================== 15-12-21 22:36:00.915 -05 000000090 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:36:00.915 -05 000000024 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:36:00.916 -05 000000090 INF: ====================================== 15-12-21 22:36:00.916 -05 000000082 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:36:00.919 -05 000000082 INF: ====================================== 15-12-21 22:36:00.919 -05 000000028 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:36:00.919 -05 000000024 INF: ====================================== 15-12-21 22:36:00.919 -05 000000028 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:36:00.920 -05 000000023 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:36:00.922 -05 000000028 INF: ====================================== 15-12-21 22:36:00.922 -05 000000049 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:36:00.923 -05 000000078 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:36:00.923 -05 000000078 INF: X Motor: Xmit PR VI\n 15-12-21 22:36:00.923 -05 000000023 INF: Y Motor: Recv 1G\r\n 15-12-21 22:36:00.927 -05 000000023 INF: Y Motor: Xmit 1D\n 15-12-21 22:36:00.927 -05 000000022 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:36:00.928 -05 000000049 INF: ====================================== 15-12-21 22:36:00.934 -05 000000022 INF: ====================================== 15-12-21 22:36:00.940 -05 000000079 INF: ====================================== 15-12-21 22:36:00.945 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:00.977 -05 000000027 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104=================== 15-12-21 22:36:00.977 -05 000000077 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105=================== 15-12-21 22:36:00.977 -05 000000051 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105=================== 15-12-21 22:36:00.981 -05 000000048 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104=================== 15-12-21 22:36:00.981 -05 000000040 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104=================== 15-12-21 22:36:00.981 -05 000000038 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1107=================== 15-12-21 22:36:00.982 -05 000000023 INF: Y Motor: Recv 1D\r\n 15-12-21 22:36:00.982 -05 000000068 INF: FPGA: Recv ZSEL 15-12-21 22:36:00.982 -05 000000066 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1107=================== 15-12-21 22:36:00.996 -05 000000078 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:36:00.996 -05 000000078 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:36:00.996 -05 000000080 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:36:00.996 -05 000000023 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:36:00.996 -05 000000078 INF: X Motor: Moving to 81.0290 mm @15.000 mm/sec, started at 80.2573 mm 15-12-21 22:36:00.996 -05 000000078 INF: X Motor: Xmit MA 9023\n 15-12-21 22:36:00.997 -05 000000011 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1107, Registering and Extracting C040 L002 T1108=================== 15-12-21 22:36:00.997 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.553C:A1\r\n 15-12-21 22:36:00.997 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:00.997 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:00.997 -05 000000023 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:36:01.012 -05 000000080 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:36:01.015 -05 000000080 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:36:01.016 -05 000000080 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:36:01.047 -05 000000078 INF: X Motor: Recv MA 9023\r\n> 15-12-21 22:36:01.047 -05 000000078 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:36:01.110 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:01.110 -05 000000082 INF: FPGA: Recv ZSTEP 15-12-21 22:36:01.111 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:01.116 -05 000000080 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:36:01.117 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:01.121 -05 000000080 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:36:01.121 -05 000000080 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:36:01.121 -05 000000080 INF: Z Motor: Arming to move to -0.1331 mm 15-12-21 22:36:01.121 -05 000000080 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:36:01.203 -05 000000090 INF: FPGA: Recv ZYT 15-12-21 22:36:01.203 -05 000000080 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907646 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:36:01.203 -05 000000080 INF: FPGA: Xmit ZARM 34882\n 15-12-21 22:36:01.208 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:36:01.208 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:01.260 -05 000000024 INF: FPGA: Recv ZARM 15-12-21 22:36:01.260 -05 000000080 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 57.0467 ms 15-12-21 22:36:01.261 -05 000000080 INF: Z Motor: ArmAbsStepped took 139.5453 ms 15-12-21 22:36:01.262 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:01.265 -05 000000080 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:01.268 -05 000000080 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:36:01.268 -05 000000080 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:01.347 -05 000000080 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:36:01.348 -05 000000080 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:01.350 -05 000000080 INF: ====================================== 15-12-21 22:36:01.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:01.382 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:01.383 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:01.384 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:36:01.385 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:01.423 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:01.423 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent USB (6)=================== 15-12-21 22:36:01.424 -05 000000057 INF: Valve A2: Go to position 6 15-12-21 22:36:01.424 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:01.424 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:36:01.424 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:01.505 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 8\r 15-12-21 22:36:01.505 -05 000000057 INF: Valve A2: 32.862 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:36:01.505 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 8 to 6 15-12-21 22:36:01.505 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC6\r 15-12-21 22:36:01.515 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:36:01.515 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:36:01.561 -05 000000078 INF: X Motor: Xmit PR ER\n 15-12-21 22:36:01.611 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:01.623 -05 000000078 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:36:01.623 -05 000000078 INF: X Motor: Moved to 81.0288 after 575 ms 15-12-21 22:36:01.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:01.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:01.625 -05 000000078 INF: ====================================== 15-12-21 22:36:02.088 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 6\r 15-12-21 22:36:02.089 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:02.089 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:36:02.089 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:02.152 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:36:02.152 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:02.268 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:36:02.352 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:02.352 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:02.486 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:02.509 -05 000000029 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:36:02.509 -05 000000029 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:36:02.509 -05 000000029 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:36:02.527 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:36:02.527 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:02.645 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:02.645 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 22:36:02.646 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:02.741 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:02.751 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 6, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 140, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:36:02.841 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:36:02.909 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 22:36:02.909 -05 000000057 INF: Current Position of Pump is: 18240 15-12-21 22:36:02.910 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6), Aspirating port PortB=================== 15-12-21 22:36:03.009 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P26880R\r 15-12-21 22:36:03.010 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:03.086 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:36:03.086 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:03.086 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:03.186 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:03.252 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:03.256 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:03.340 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:03.340 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:03.439 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:03.480 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:03.480 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:03.506 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:03.570 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:03.613 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:03.663 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:03.663 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:03.850 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:03.913 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:04.034 -05 000000029 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:36:04.035 -05 000000029 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:36:04.035 -05 000000029 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:36:04.037 -05 000000029 INF: ====================================== 15-12-21 22:36:04.055 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:04.065 -05 000000081 INF: ====================================== 15-12-21 22:36:04.163 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:04.226 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:04.476 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:04.537 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:04.787 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:04.848 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:04.850 -05 000000023 INF: Y Motor: Moved to 70.6885 after 3853 ms 15-12-21 22:36:04.851 -05 000000023 INF: ====================================== 15-12-21 22:36:04.853 -05 000000063 INF: ===================Move X,Y=================== 15-12-21 22:36:04.855 -05 000000063 INF: ====================================== 15-12-21 22:36:04.863 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:04.868 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:04.868 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:36:04.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:04.921 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:36:04.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:04.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:04.922 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:36:04.972 -05 000000063 INF: FPGA: Recv ZFREQCL 15-12-21 22:36:04.973 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:36:04.974 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:04.974 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:36:05.024 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:05.037 -05 000000080 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:36:05.037 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:36:05.039 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:05.039 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:05.039 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:05.040 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:05.053 -05 000000029 INF: ===================TDI FPGA Arm=================== 15-12-21 22:36:05.053 -05 000000095 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:36:05.056 -05 000000095 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:36:05.077 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:05.095 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:36:05.099 -05 000000029 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:36:05.100 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:05.113 -05 000000095 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:36:05.119 -05 000000095 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:36:05.122 -05 000000095 INF: ====================================== 15-12-21 22:36:05.159 -05 000000068 INF: FPGA: Recv TDIYPOS 15-12-21 22:36:05.160 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:05.160 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:05.165 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:36:05.165 -05 000000029 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:36:05.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:05.276 -05 000000023 INF: FPGA: Recv TDIYARM3 15-12-21 22:36:05.277 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:05.278 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:05.278 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:05.280 -05 000000029 INF: ===================TDI FPGA Arm=================== 15-12-21 22:36:05.282 -05 000000029 INF: ====================================== 15-12-21 22:36:05.284 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:05.286 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:05.286 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:05.287 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:05.289 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:05.298 -05 000000068 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:36:05.298 -05 000000090 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:36:05.298 -05 000000068 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:36:05.298 -05 000000068 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:36:05.298 -05 000000068 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:36:05.298 -05 000000068 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:36:05.298 -05 000000090 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:36:05.299 -05 000000090 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:36:05.299 -05 000000090 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:36:05.325 -05 000000090 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:36:05.410 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:05.443 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:05.496 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:05.504 -05 000000078 INF: FPGA: Recv EX1MV 15-12-21 22:36:05.504 -05 000000068 INF: Excitation Filter 1: Moved -36 steps in 206.0562 ms 15-12-21 22:36:05.505 -05 000000068 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 206.2636 ms 15-12-21 22:36:05.505 -05 000000068 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 206.3362 ms 15-12-21 22:36:05.505 -05 000000068 INF: ====================================== 15-12-21 22:36:05.569 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.844C:A1\r\n 15-12-21 22:36:05.569 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:05.707 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:05.710 -05 000000082 INF: FPGA: Recv EX2MV 15-12-21 22:36:05.710 -05 000000090 INF: Excitation Filter 2: Moved -107 steps in 411.427 ms 15-12-21 22:36:05.710 -05 000000090 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 411.5559 ms 15-12-21 22:36:05.710 -05 000000090 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 411.6524 ms 15-12-21 22:36:05.711 -05 000000090 INF: ====================================== 15-12-21 22:36:05.713 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:05.731 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:05.732 -05 000000063 INF: ===================Camera TDI=================== 15-12-21 22:36:05.732 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:36:05.733 -05 000000078 INF: ===================FPGA Z Wait=================== 15-12-21 22:36:05.733 -05 000000078 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:36:05.746 -05 000000022 INF: ===================Move Y Motor without settling=================== 15-12-21 22:36:05.747 -05 000000022 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:36:05.747 -05 000000063 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:36:05.747 -05 000000028 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:36:05.747 -05 000000022 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:36:05.750 -05 000000022 INF: Y Motor: Xmit 1G\n 15-12-21 22:36:05.750 -05 000000028 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:36:05.751 -05 000000029 INF: ===================Camera TDI=================== 15-12-21 22:36:05.752 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:36:05.773 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:05.779 -05 000000040 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1107=================== 15-12-21 22:36:05.831 -05 000000022 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:36:05.832 -05 000000022 INF: Y Motor: Recv 1G\r\n 15-12-21 22:36:05.833 -05 000000022 INF: Y Motor: Xmit 1D\n 15-12-21 22:36:05.880 -05 000000060 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1107, Registering and Extracting C040 L002 T1109=================== 15-12-21 22:36:05.909 -05 000000022 INF: Y Motor: Recv 1D\r\n 15-12-21 22:36:05.910 -05 000000022 INF: Y Motor: Recv *407662\r\n 15-12-21 22:36:05.967 -05 000000022 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:36:06.023 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:06.082 -05 000000049 INF: FPGA: Recv ZWAIT 15-12-21 22:36:06.083 -05 000000078 INF: ====================================== 15-12-21 22:36:06.098 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:06.133 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:06.180 -05 000000051 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1107=================== 15-12-21 22:36:06.181 -05 000000089 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1107, Registering and Extracting C040 L002 T1110=================== 15-12-21 22:36:06.207 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.725C:A1\r\n 15-12-21 22:36:06.207 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:06.282 -05 000000080 INF: ===================Frame #7=================== 15-12-21 22:36:06.282 -05 000000029 INF: ===================Frame #7=================== 15-12-21 22:36:06.310 -05 000000038 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1107=================== 15-12-21 22:36:06.358 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:06.367 -05 000000077 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106=================== 15-12-21 22:36:06.381 -05 000000075 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111=================== 15-12-21 22:36:06.381 -05 000000071 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111, Registering and Extracting C040 L002 T1112=================== 15-12-21 22:36:06.434 -05 000000080 INF: ===================Frame #19=================== 15-12-21 22:36:06.434 -05 000000029 INF: ===================Frame #19=================== 15-12-21 22:36:06.441 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:06.584 -05 000000029 INF: ===================Frame #31=================== 15-12-21 22:36:06.585 -05 000000080 INF: ===================Frame #31=================== 15-12-21 22:36:06.646 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:06.691 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:06.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:06.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:06.739 -05 000000029 INF: ===================Frame #43=================== 15-12-21 22:36:06.739 -05 000000080 INF: ===================Frame #43=================== 15-12-21 22:36:06.754 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:06.839 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:06.862 -05 000000048 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111=================== 15-12-21 22:36:06.882 -05 000000094 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111, Registering and Extracting C040 L002 T1113=================== 15-12-21 22:36:06.889 -05 000000029 INF: ===================Frame #55=================== 15-12-21 22:36:06.889 -05 000000080 INF: ===================Frame #55=================== 15-12-21 22:36:06.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:06.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:06.980 -05 000000027 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111=================== 15-12-21 22:36:06.981 -05 000000065 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111, Registering and Extracting C040 L002 T1114=================== 15-12-21 22:36:07.004 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:07.036 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:07.040 -05 000000080 INF: ===================Frame #67=================== 15-12-21 22:36:07.041 -05 000000029 INF: ===================Frame #67=================== 15-12-21 22:36:07.079 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:07.111 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:07.111 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:07.120 -05 000000066 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111=================== 15-12-21 22:36:07.181 -05 000000009 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111, Registering and Extracting C040 L002 T1115=================== 15-12-21 22:36:07.191 -05 000000080 INF: ===================Frame #79=================== 15-12-21 22:36:07.192 -05 000000029 INF: ===================Frame #79=================== 15-12-21 22:36:07.209 -05 000000011 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111=================== 15-12-21 22:36:07.316 -05 000000074 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111, Registering and Extracting C040 L002 T1116=================== 15-12-21 22:36:07.329 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:07.342 -05 000000029 INF: ===================Frame #91=================== 15-12-21 22:36:07.342 -05 000000080 INF: ===================Frame #91=================== 15-12-21 22:36:07.377 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:07.492 -05 000000029 INF: ===================Frame #102=================== 15-12-21 22:36:07.493 -05 000000080 INF: ===================Frame #102=================== 15-12-21 22:36:07.627 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:07.705 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:07.955 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:08.016 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:08.266 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:08.337 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:08.401 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:08.453 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 22:36:08.453 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:08.587 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:08.598 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:08.635 -05 000000029 INF: ===================Frame #193=================== 15-12-21 22:36:08.635 -05 000000080 INF: ===================Frame #193=================== 15-12-21 22:36:08.692 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:08.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:08.693 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:08.785 -05 000000029 INF: ===================Frame #205=================== 15-12-21 22:36:08.786 -05 000000080 INF: ===================Frame #205=================== 15-12-21 22:36:08.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:08.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:08.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:08.928 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:08.936 -05 000000029 INF: ===================Frame #217=================== 15-12-21 22:36:08.936 -05 000000080 INF: ===================Frame #217=================== 15-12-21 22:36:08.942 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:09.013 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:09.013 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:09.014 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:09.088 -05 000000080 INF: ===================Frame #228=================== 15-12-21 22:36:09.088 -05 000000029 INF: ===================Frame #228=================== 15-12-21 22:36:09.264 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:09.325 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:09.326 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 22:36:09.425 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:36:09.516 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 22:36:09.516 -05 000000057 INF: Current Position of Pump is: 45120 15-12-21 22:36:09.516 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:36:09.616 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:36:09.702 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:09.769 -05 000000029 INF: ===================Frame #282=================== 15-12-21 22:36:09.774 -05 000000060 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106, Registering and Extracting C040 L002 T1111=================== 15-12-21 22:36:09.778 -05 000000080 INF: ===================Frame #283=================== 15-12-21 22:36:09.802 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:09.826 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:09.928 -05 000000080 INF: ===================Frame #295=================== 15-12-21 22:36:10.040 -05 000000029 INF: ===================Frame #304=================== 15-12-21 22:36:10.076 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:10.079 -05 000000080 INF: ===================Frame #307=================== 15-12-21 22:36:10.138 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:10.138 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:10.139 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:36:10.230 -05 000000080 INF: ===================Frame #319=================== 15-12-21 22:36:10.232 -05 000000029 INF: ===================Frame #319=================== 15-12-21 22:36:10.309 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:10.325 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:36:10.325 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:10.382 -05 000000080 INF: ===================Frame #331=================== 15-12-21 22:36:10.382 -05 000000029 INF: ===================Frame #331=================== 15-12-21 22:36:10.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:10.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:10.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:10.533 -05 000000080 INF: ===================Frame #343=================== 15-12-21 22:36:10.533 -05 000000029 INF: ===================Frame #343=================== 15-12-21 22:36:10.575 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:36:10.639 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:10.639 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:10.686 -05 000000029 INF: ===================Frame #355=================== 15-12-21 22:36:10.687 -05 000000080 INF: ===================Frame #355=================== 15-12-21 22:36:10.688 -05 000000089 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105, Registering and Extracting C040 L002 T1106=================== 15-12-21 22:36:10.742 -05 000000071 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104, Registering and Extracting C040 L002 T1105=================== 15-12-21 22:36:10.753 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:10.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:10.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:10.838 -05 000000029 INF: ===================Frame #367=================== 15-12-21 22:36:10.838 -05 000000080 INF: ===================Frame #367=================== 15-12-21 22:36:10.928 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:10.951 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.876C:A1\r\n 15-12-21 22:36:10.951 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:10.988 -05 000000029 INF: ===================Frame #379=================== 15-12-21 22:36:10.988 -05 000000080 INF: ===================Frame #379=================== 15-12-21 22:36:11.022 -05 000000075 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103, Registering and Extracting C040 L002 T1104=================== 15-12-21 22:36:11.058 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:11.137 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:36:11.137 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:11.138 -05 000000029 INF: ===================Frame #391=================== 15-12-21 22:36:11.138 -05 000000080 INF: ===================Frame #391=================== 15-12-21 22:36:11.241 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:11.241 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:11.242 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:11.243 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:36:11.247 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle=================== 15-12-21 22:36:11.248 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:11.249 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:11.249 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:11.270 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:11.270 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:11.295 -05 000000029 INF: ===================Frame #403=================== 15-12-21 22:36:11.296 -05 000000080 INF: ===================Frame #403=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 77ms 15-12-21 22:36:11.327 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:11.399 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:11.401 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:11.401 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Selecting Reagent IMT (1)=================== 15-12-21 22:36:11.401 -05 000000057 INF: Valve A2: Go to position 1 15-12-21 22:36:11.402 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:36:11.412 -05 000000009 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102, Registering and Extracting C040 L002 T1103=================== 15-12-21 22:36:11.491 -05 000000029 INF: ===================Frame #418=================== 15-12-21 22:36:11.492 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.788C:A1\r\n 15-12-21 22:36:11.492 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:11.492 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 6\r 15-12-21 22:36:11.492 -05 000000057 INF: Valve A2: 9.987 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:36:11.492 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 6 to 1 15-12-21 22:36:11.492 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC1\r 15-12-21 22:36:11.493 -05 000000080 INF: ===================Frame #419=================== 15-12-21 22:36:11.493 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:36:11.493 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:36:11.683 -05 000000080 INF: ===================Frame #432=================== 15-12-21 22:36:11.877 -05 000000065 INF: ===================Registering and Extracting C040 L002 T1101, Registering and Extracting C040 L002 T1102=================== 15-12-21 22:36:12.008 -05 000000094 INF: ===================Registering and Extracting C040 L002 T1101=================== 15-12-21 22:36:12.010 -05 000000074 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:36:12.095 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:12.107 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:36:12.149 -05 000000029 INF: ===================Frame #471=================== 15-12-21 22:36:12.264 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:12.272 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:36:12.300 -05 000000029 INF: ===================Frame #482=================== 15-12-21 22:36:12.318 -05 000000080 INF: ===================Frame #484=================== 15-12-21 22:36:12.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:12.570 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 1\r 15-12-21 22:36:12.570 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:12.570 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:36:12.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:12.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:12.605 -05 000000080 INF: ===================Frame #507=================== 15-12-21 22:36:12.611 -05 000000029 INF: ===================Frame #507=================== 15-12-21 22:36:12.615 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:12.627 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:36:12.679 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:12.697 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:36:12.697 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:12.755 -05 000000080 INF: ===================Frame #518=================== 15-12-21 22:36:12.761 -05 000000029 INF: ===================Frame #519=================== 15-12-21 22:36:12.807 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:12.818 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:12.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:12.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:12.826 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:36:12.912 -05 000000029 INF: ===================Frame #531=================== 15-12-21 22:36:12.931 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:12.931 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:36:13.000 -05 000000080 INF: ===================Frame #538=================== 15-12-21 22:36:13.010 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:13.010 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:13.062 -05 000000029 INF: ===================Frame #543=================== 15-12-21 22:36:13.113 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:13.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:13.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:13.196 -05 000000080 INF: ===================Frame #553=================== 15-12-21 22:36:13.213 -05 000000029 INF: ===================Frame #555=================== 15-12-21 22:36:13.238 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:13.259 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:36:13.259 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:13.347 -05 000000080 INF: ===================Frame #565=================== 15-12-21 22:36:13.363 -05 000000029 INF: ===================Frame #567=================== 15-12-21 22:36:13.369 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:13.369 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:36:13.369 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:13.446 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:13.458 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 1, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:36:13.498 -05 000000080 INF: ===================Frame #577=================== 15-12-21 22:36:13.513 -05 000000029 INF: ===================Frame #578=================== 15-12-21 22:36:13.549 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:36:13.600 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:13.631 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 22:36:13.631 -05 000000057 INF: Current Position of Pump is: 45120 15-12-21 22:36:13.631 -05 000000057 INF: Dispensing because using MultiAspirate and syringe is full 15-12-21 22:36:13.632 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.984C:A1\r\n 15-12-21 22:36:13.632 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:13.649 -05 000000080 INF: ===================Frame #589=================== 15-12-21 22:36:13.731 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1OR\r 15-12-21 22:36:13.800 -05 000000080 INF: ===================Frame #601=================== 15-12-21 22:36:13.818 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:13.897 -05 000000029 INF: ===================Frame #609=================== 15-12-21 22:36:13.918 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:13.951 -05 000000080 INF: ===================Frame #613=================== 15-12-21 22:36:14.006 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:14.025 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:36:14.048 -05 000000029 INF: ===================Frame #621=================== 15-12-21 22:36:14.102 -05 000000080 INF: ===================Frame #625=================== 15-12-21 22:36:14.199 -05 000000029 INF: ===================Frame #633=================== 15-12-21 22:36:14.254 -05 000000080 INF: ===================Frame #637=================== 15-12-21 22:36:14.256 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:14.317 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:14.349 -05 000000029 INF: ===================Frame #644=================== 15-12-21 22:36:14.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:14.404 -05 000000080 INF: ===================Frame #649=================== 15-12-21 22:36:14.421 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V10000A0R\r 15-12-21 22:36:14.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:14.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:14.506 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:14.550 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:14.555 -05 000000080 INF: ===================Frame #661=================== 15-12-21 22:36:14.568 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:14.568 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:14.582 -05 000000029 INF: ===================Frame #663=================== 15-12-21 22:36:14.606 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:14.674 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:14.693 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:14.694 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:14.694 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:14.705 -05 000000080 INF: ===================Frame #673=================== 15-12-21 22:36:14.732 -05 000000029 INF: ===================Frame #675=================== 15-12-21 22:36:14.856 -05 000000080 INF: ===================Frame #685=================== 15-12-21 22:36:14.883 -05 000000029 INF: ===================Frame #687=================== 15-12-21 22:36:14.943 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:15.006 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:15.007 -05 000000080 INF: ===================Frame #697=================== 15-12-21 22:36:15.033 -05 000000029 INF: ===================Frame #699=================== 15-12-21 22:36:15.157 -05 000000080 INF: ===================Frame #708=================== 15-12-21 22:36:15.183 -05 000000029 INF: ===================Frame #710=================== 15-12-21 22:36:15.256 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:15.317 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:15.457 -05 000000029 INF: ===================Frame #732=================== 15-12-21 22:36:15.552 -05 000000080 INF: ===================Frame #740=================== 15-12-21 22:36:15.567 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:15.628 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:15.629 -05 000000029 INF: ===================Frame #746=================== 15-12-21 22:36:15.737 -05 000000080 INF: ===================Frame #754=================== 15-12-21 22:36:15.793 -05 000000029 INF: ===================Frame #759=================== 15-12-21 22:36:15.878 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:15.901 -05 000000080 INF: ===================Frame #767=================== 15-12-21 22:36:15.920 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:15.939 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:15.940 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:15.940 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:15.943 -05 000000029 INF: ===================Frame #770=================== 15-12-21 22:36:16.042 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:16.052 -05 000000080 INF: ===================Frame #779=================== 15-12-21 22:36:16.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:16.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:16.127 -05 000000029 INF: ===================Frame #785=================== 15-12-21 22:36:16.166 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:16.189 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:16.192 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.917C:A1\r\n 15-12-21 22:36:16.192 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:16.202 -05 000000080 INF: ===================Frame #791=================== 15-12-21 22:36:16.253 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:16.277 -05 000000029 INF: ===================Frame #797=================== 15-12-21 22:36:16.296 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:16.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:16.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:16.352 -05 000000080 INF: ===================Frame #803=================== 15-12-21 22:36:16.428 -05 000000029 INF: ===================Frame #809=================== 15-12-21 22:36:16.503 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:16.503 -05 000000080 INF: ===================Frame #815=================== 15-12-21 22:36:16.564 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:16.578 -05 000000029 INF: ===================Frame #821=================== 15-12-21 22:36:16.653 -05 000000080 INF: ===================Frame #827=================== 15-12-21 22:36:16.729 -05 000000029 INF: ===================Frame #833=================== 15-12-21 22:36:16.759 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:16.803 -05 000000080 INF: ===================Frame #839=================== 15-12-21 22:36:16.814 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:16.814 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.228C:A1\r\n 15-12-21 22:36:16.814 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:16.879 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:16.880 -05 000000029 INF: ===================Frame #845=================== 15-12-21 22:36:16.953 -05 000000080 INF: ===================Frame #850=================== 15-12-21 22:36:17.030 -05 000000029 INF: ===================Frame #856=================== 15-12-21 22:36:17.129 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:17.188 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:17.232 -05 000000080 INF: ===================Frame #872=================== 15-12-21 22:36:17.297 -05 000000029 INF: ===================Frame #878=================== 15-12-21 22:36:17.409 -05 000000080 INF: ===================Frame #886=================== 15-12-21 22:36:17.438 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:17.472 -05 000000029 INF: ===================Frame #891=================== 15-12-21 22:36:17.499 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:17.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:17.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:17.564 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:17.577 -05 000000080 INF: ===================Frame #900=================== 15-12-21 22:36:17.622 -05 000000029 INF: ===================Frame #903=================== 15-12-21 22:36:17.663 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:17.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:17.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:17.740 -05 000000080 INF: ===================Frame #913=================== 15-12-21 22:36:17.749 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:17.773 -05 000000029 INF: ===================Frame #915=================== 15-12-21 22:36:17.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:17.813 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:17.814 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:17.814 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:17.890 -05 000000080 INF: ===================Frame #924=================== 15-12-21 22:36:17.924 -05 000000029 INF: ===================Frame #927=================== 15-12-21 22:36:18.062 -05 000000080 INF: ===================Frame #938=================== 15-12-21 22:36:18.063 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:18.075 -05 000000029 INF: ===================Frame #939=================== 15-12-21 22:36:18.125 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:18.225 -05 000000029 INF: ===================Frame #951=================== 15-12-21 22:36:18.230 -05 000000080 INF: ===================Frame #951=================== 15-12-21 22:36:18.375 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:18.376 -05 000000029 INF: ===================Frame #963=================== 15-12-21 22:36:18.380 -05 000000080 INF: ===================Frame #963=================== 15-12-21 22:36:18.436 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:18.526 -05 000000029 INF: ===================Frame #975=================== 15-12-21 22:36:18.530 -05 000000080 INF: ===================Frame #975=================== 15-12-21 22:36:18.676 -05 000000029 INF: ===================Frame #987=================== 15-12-21 22:36:18.680 -05 000000080 INF: ===================Frame #987=================== 15-12-21 22:36:18.686 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:18.738 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:18.747 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:18.812 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.984C:A1\r\n 15-12-21 22:36:18.812 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:18.826 -05 000000029 INF: ===================Frame #998=================== 15-12-21 22:36:18.830 -05 000000080 INF: ===================Frame #999=================== 15-12-21 22:36:18.980 -05 000000080 INF: ===================Frame #1011=================== 15-12-21 22:36:18.997 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:19.038 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:19.061 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:19.061 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 22:36:19.062 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:19.062 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:19.095 -05 000000029 INF: ===================Frame #1020=================== 15-12-21 22:36:19.131 -05 000000080 INF: ===================Frame #1023=================== 15-12-21 22:36:19.162 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P21120R\r 15-12-21 22:36:19.171 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:19.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:19.186 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:19.247 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:19.269 -05 000000029 INF: ===================Frame #1033=================== 15-12-21 22:36:19.281 -05 000000080 INF: ===================Frame #1034=================== 15-12-21 22:36:19.294 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:19.347 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:19.374 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:19.374 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:19.421 -05 000000029 INF: ===================Frame #1045=================== 15-12-21 22:36:19.434 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:19.542 -05 000000080 INF: ===================Frame #1055=================== 15-12-21 22:36:19.571 -05 000000029 INF: ===================Frame #1057=================== 15-12-21 22:36:19.684 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:19.693 -05 000000080 INF: ===================Frame #1067=================== 15-12-21 22:36:19.721 -05 000000029 INF: ===================Frame #1069=================== 15-12-21 22:36:19.747 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:19.843 -05 000000080 INF: ===================Frame #1079=================== 15-12-21 22:36:19.871 -05 000000029 INF: ===================Frame #1081=================== 15-12-21 22:36:19.993 -05 000000080 INF: ===================Frame #1091=================== 15-12-21 22:36:19.997 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:20.021 -05 000000029 INF: ===================Frame #1093=================== 15-12-21 22:36:20.059 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:20.144 -05 000000080 INF: ===================Frame #1103=================== 15-12-21 22:36:20.171 -05 000000029 INF: ===================Frame #1105=================== 15-12-21 22:36:20.294 -05 000000080 INF: ===================Frame #1115=================== 15-12-21 22:36:20.309 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:20.321 -05 000000029 INF: ===================Frame #1117=================== 15-12-21 22:36:20.371 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:20.444 -05 000000080 INF: ===================Frame #1126=================== 15-12-21 22:36:20.472 -05 000000029 INF: ===================Frame #1129=================== 15-12-21 22:36:20.621 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:20.623 -05 000000029 INF: ===================Frame #1141=================== 15-12-21 22:36:20.664 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:20.684 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:20.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:20.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:20.687 -05 000000080 INF: ===================Frame #1146=================== 15-12-21 22:36:20.774 -05 000000029 INF: ===================Frame #1152=================== 15-12-21 22:36:20.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:20.808 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:20.808 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:20.859 -05 000000080 INF: ===================Frame #1159=================== 15-12-21 22:36:20.914 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:20.934 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:20.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:20.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:20.994 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:21.010 -05 000000080 INF: ===================Frame #1171=================== 15-12-21 22:36:21.057 -05 000000029 INF: ===================Frame #1175=================== 15-12-21 22:36:21.160 -05 000000080 INF: ===================Frame #1183=================== 15-12-21 22:36:21.209 -05 000000029 INF: ===================Frame #1187=================== 15-12-21 22:36:21.244 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:21.296 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:21.306 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:21.312 -05 000000080 INF: ===================Frame #1195=================== 15-12-21 22:36:21.359 -05 000000029 INF: ===================Frame #1199=================== 15-12-21 22:36:21.369 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.946C:A1\r\n 15-12-21 22:36:21.369 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:21.462 -05 000000080 INF: ===================Frame #1207=================== 15-12-21 22:36:21.509 -05 000000029 INF: ===================Frame #1211=================== 15-12-21 22:36:21.556 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:21.612 -05 000000080 INF: ===================Frame #1219=================== 15-12-21 22:36:21.618 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:21.659 -05 000000029 INF: ===================Frame #1222=================== 15-12-21 22:36:21.762 -05 000000080 INF: ===================Frame #1231=================== 15-12-21 22:36:21.868 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:21.879 -05 000000029 INF: ===================Frame #1240=================== 15-12-21 22:36:21.912 -05 000000080 INF: ===================Frame #1242=================== 15-12-21 22:36:21.918 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:21.931 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:21.994 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.419C:A1\r\n 15-12-21 22:36:21.994 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:22.047 -05 000000029 INF: ===================Frame #1250=================== 15-12-21 22:36:22.054 -05 000000056 INF: FPGA: Recv TDIYWAIT 15-12-21 22:36:22.054 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:36:22.061 -05 000000028 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:36:22.064 -05 000000085 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:36:22.065 -05 000000085 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:36:22.065 -05 000000085 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:36:22.067 -05 000000085 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:36:22.067 -05 000000023 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:36:22.072 -05 000000023 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:36:22.072 -05 000000023 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:36:22.072 -05 000000023 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:36:22.072 -05 000000029 INF: Camera complete - got 1250 frames. 15-12-21 22:36:22.072 -05 000000085 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:36:22.074 -05 000000023 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:36:22.078 -05 000000029 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:36:22.181 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:22.268 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:22.268 -05 000000081 INF: FPGA: Recv EX1MV 15-12-21 22:36:22.268 -05 000000085 INF: Excitation Filter 1: Moved 36 steps in 203.4667 ms 15-12-21 22:36:22.268 -05 000000085 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 203.5755 ms 15-12-21 22:36:22.268 -05 000000085 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 203.6551 ms 15-12-21 22:36:22.270 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:22.271 -05 000000085 INF: ====================================== 15-12-21 22:36:22.322 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:22.322 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:22.480 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:22.507 -05 000000081 INF: FPGA: Recv EX2MV 15-12-21 22:36:22.507 -05 000000023 INF: Excitation Filter 2: Moved 107 steps in 435.1619 ms 15-12-21 22:36:22.507 -05 000000023 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 435.2543 ms 15-12-21 22:36:22.507 -05 000000023 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 440.0145 ms 15-12-21 22:36:22.508 -05 000000023 INF: ====================================== 15-12-21 22:36:22.509 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:22.509 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:22.510 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:36:22.514 -05 000000028 INF: ====================================== 15-12-21 22:36:22.520 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:22.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:22.656 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:22.660 -05 000000022 INF: Y Motor: Moved to 9.0764 after 16694 ms 15-12-21 22:36:22.661 -05 000000022 INF: ====================================== 15-12-21 22:36:22.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:22.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:22.761 -05 000000080 INF: ===================Frame #1250=================== 15-12-21 22:36:22.761 -05 000000029 INF: ===================Camera TDI=================== 15-12-21 22:36:22.773 -05 000000080 INF: Camera complete - got 1250 frames. 15-12-21 22:36:22.775 -05 000000080 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:36:22.784 -05 000000029 INF: ====================================== 15-12-21 22:36:22.899 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:36:22.906 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:22.921 -05 000000080 INF: ====================================== 15-12-21 22:36:22.925 -05 000000063 INF: ===================Camera TDI=================== 15-12-21 22:36:22.926 -05 000000063 INF: ====================================== 15-12-21 22:36:22.930 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:22.934 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:22.937 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:22.938 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:36:22.958 -05 000000081 INF: FPGA: Recv TDICLINES 10193 15-12-21 22:36:22.958 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:36:22.961 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:23.021 -05 000000023 INF: FPGA: Recv TDIYERD 907649 15-12-21 22:36:23.021 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:36:23.083 -05 000000056 INF: FPGA: Recv ZADCR 38753 15-12-21 22:36:23.083 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.148. Y moved -60.304 mm 15-12-21 22:36:23.083 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:36:23.147 -05 000000068 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:36:23.147 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:36:23.147 -05 000000062 INF: TDIScan finished after 22315.5338 ms 15-12-21 22:36:23.147 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:36:23.147 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:36:23.151 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:23.178 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.161 um 15-12-21 22:36:23.178 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:23.184 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:23.187 -05 000000081 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:36:23.187 -05 000000085 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:36:23.187 -05 000000081 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:36:23.190 -05 000000063 INF: ===================Dither Clean Up Command=================== 15-12-21 22:36:23.193 -05 000000022 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:36:23.198 -05 000000022 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:36:23.198 -05 000000022 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:36:23.198 -05 000000029 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:36:23.198 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:23.203 -05 000000029 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:36:23.210 -05 000000080 INF: ===================LFT:Extracting coords=================== 15-12-21 22:36:23.214 -05 000000024 INF: FPGA: Recv ZSTEP 15-12-21 22:36:23.214 -05 000000024 INF: FPGA: Recv ZSEL 15-12-21 22:36:23.215 -05 000000029 INF: FPGA: Xmit ZDACW 45368\n 15-12-21 22:36:23.215 -05 000000022 INF: ====================================== 15-12-21 22:36:23.216 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:23.217 -05 000000081 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:36:23.218 -05 000000081 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:36:23.218 -05 000000085 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:36:23.218 -05 000000081 INF: ====================================== 15-12-21 22:36:23.246 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:23.247 -05 000000080 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:36:23.248 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:23.248 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:23.248 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:23.248 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:23.249 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:23.249 -05 000000068 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:23.249 -05 000000022 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:23.249 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:23.272 -05 000000085 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:36:23.272 -05 000000028 INF: FPGA: Recv ZDACW 15-12-21 22:36:23.272 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:23.273 -05 000000029 INF: ====================================== 15-12-21 22:36:23.273 -05 000000085 INF: ====================================== 15-12-21 22:36:23.466 -05 000000056 INF: LFT found best fwhm score 2.51233 in 170 ms 15-12-21 22:36:23.466 -05 000000056 INF: LFT found good score at index 8937 with fwhm value 2.51233. Next cycle, cycle 41 starting Z position for top surface is at -0.174 mm FC:B, C:40,L:2,T 15-12-21 22:36:23.467 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:23.467 -05 000000056 INF: ====================================== 15-12-21 22:36:23.472 -05 000000022 INF: LFT found best fwhm score 2.341859 in 176 ms 15-12-21 22:36:23.472 -05 000000022 INF: LFT found good score at index 6093 with fwhm value 2.341859. Next cycle, cycle 41 starting Z position for top surface is at -0.174 mm FC:B, C:40,L:2,T 15-12-21 22:36:23.473 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:23.473 -05 000000022 INF: ====================================== 15-12-21 22:36:23.474 -05 000000055 INF: LFT found best fwhm score 2.658804 in 178 ms 15-12-21 22:36:23.474 -05 000000055 INF: LFT found good score at index 3081 with fwhm value 2.658804. Next cycle, cycle 41 starting Z position for top surface is at -0.175 mm FC:B, C:40,L:2,T 15-12-21 22:36:23.474 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:23.474 -05 000000055 INF: ====================================== 15-12-21 22:36:23.476 -05 000000068 INF: LFT found best fwhm score 2.604664 in 180 ms 15-12-21 22:36:23.476 -05 000000068 INF: LFT found good score at index 1749 with fwhm value 2.604664. Next cycle, cycle 41 starting Z position for top surface is at -0.176 mm FC:B, C:40,L:2,T 15-12-21 22:36:23.476 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:23.477 -05 000000068 INF: ====================================== 15-12-21 22:36:23.478 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:23.480 -05 000000080 INF: LFT weighted average best Z for top surface is at -0.175mm FC:B, C:40,L:2,T 15-12-21 22:36:23.480 -05 000000080 INF: ====================================== 15-12-21 22:36:23.482 -05 000000063 INF: ====================================== 15-12-21 22:36:23.483 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:23.488 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:36:23.488 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:23.491 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:36:23.492 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:23.492 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:36:23.494 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:23.494 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:36:23.494 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:23.494 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:36:23.495 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:36:23.499 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 22:36:23.499 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 22:36:23.500 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:36:23.500 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:36:23.500 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:36:23.502 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:36:23.502 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:23.504 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:36:23.505 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:36:23.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface, Lane 2=================== 15-12-21 22:36:23.506 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Top Surface=================== 15-12-21 22:36:23.506 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:36:23.508 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface=================== 15-12-21 22:36:23.511 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface=================== 15-12-21 22:36:23.512 -05 000000062 INF: Compensator: Moving OutOfPath 15-12-21 22:36:23.512 -05 000000062 INF: FPGA: Xmit MIOCOMPR\n 15-12-21 22:36:23.522 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:23.586 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:23.627 -05 000000074 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203=================== 15-12-21 22:36:23.627 -05 000000094 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204=================== 15-12-21 22:36:23.627 -05 000000009 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204=================== 15-12-21 22:36:23.627 -05 000000065 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205=================== 15-12-21 22:36:23.627 -05 000000071 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205=================== 15-12-21 22:36:23.628 -05 000000075 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206=================== 15-12-21 22:36:23.631 -05 000000089 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207=================== 15-12-21 22:36:23.631 -05 000000060 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207, Registering and Extracting C040 L002 T1208=================== 15-12-21 22:36:23.836 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:23.929 -05 000000056 INF: FPGA: Recv MIOCOMPR 15-12-21 22:36:23.929 -05 000000062 INF: Compensator: Moved OutOfPath in 417 ms 15-12-21 22:36:23.929 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface=================== 15-12-21 22:36:23.930 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:23.948 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:36:23.949 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:36:23.949 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:36:23.956 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:36:23.958 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:36:23.958 -05 000000062 INF: Compensator: Remaining OutOfPath 15-12-21 22:36:23.971 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:36:23.981 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:36:23.995 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:36:23.996 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:36:24.014 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:24.018 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:24.018 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:36:24.018 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:24.018 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -173.1 um, section = A_1 15-12-21 22:36:24.024 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:24.025 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:24.026 -05 000000081 INF: ===================MoveEmissionFilters=================== 15-12-21 22:36:24.027 -05 000000078 INF: ===================Move X,Y=================== 15-12-21 22:36:24.027 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:24.028 -05 000000080 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:36:24.028 -05 000000056 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:36:24.028 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:36:24.028 -05 000000028 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:36:24.028 -05 000000028 INF: Z Motor: Moving to -0.1222 mm, started at -0.1731 mm 15-12-21 22:36:24.028 -05 000000068 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:36:24.028 -05 000000028 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:36:24.028 -05 000000078 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:36:24.028 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:36:24.029 -05 000000080 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:36:24.030 -05 000000056 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:36:24.030 -05 000000068 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:36:24.030 -05 000000022 INF: ===================Move X Motor without settling=================== 15-12-21 22:36:24.030 -05 000000024 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:36:24.030 -05 000000079 INF: ===================Move Y Motor without settling=================== 15-12-21 22:36:24.030 -05 000000022 INF: X Motor: Xmit PR VM\n 15-12-21 22:36:24.055 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:36:24.055 -05 000000023 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:36:24.056 -05 000000024 INF: ====================================== 15-12-21 22:36:24.056 -05 000000055 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:36:24.056 -05 000000063 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:36:24.056 -05 000000023 INF: ====================================== 15-12-21 22:36:24.056 -05 000000055 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:36:24.057 -05 000000063 INF: ====================================== 15-12-21 22:36:24.057 -05 000000055 INF: ====================================== 15-12-21 22:36:24.057 -05 000000085 INF: FPGA: Recv ZTRG 15-12-21 22:36:24.061 -05 000000028 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:36:24.064 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:36:24.064 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:24.064 -05 000000079 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:36:24.064 -05 000000079 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:36:24.065 -05 000000079 INF: Y Motor: Xmit 1G\n 15-12-21 22:36:24.065 -05 000000085 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:36:24.065 -05 000000080 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:36:24.065 -05 000000085 INF: ====================================== 15-12-21 22:36:24.094 -05 000000024 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:36:24.094 -05 000000056 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:36:24.129 -05 000000024 INF: ====================================== 15-12-21 22:36:24.129 -05 000000023 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:36:24.129 -05 000000080 INF: ====================================== 15-12-21 22:36:24.130 -05 000000063 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:36:24.130 -05 000000023 INF: ====================================== 15-12-21 22:36:24.158 -05 000000085 INF: FPGA: Recv ZYT 15-12-21 22:36:24.158 -05 000000028 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:36:24.158 -05 000000028 INF: FPGA: Xmit ZMV 32043\n 15-12-21 22:36:24.158 -05 000000063 INF: ====================================== 15-12-21 22:36:24.158 -05 000000056 INF: ====================================== 15-12-21 22:36:24.159 -05 000000079 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:36:24.186 -05 000000022 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:36:24.186 -05 000000079 INF: Y Motor: Recv 1G\r\n 15-12-21 22:36:24.186 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:24.186 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:36:24.186 -05 000000022 INF: X Motor: Xmit PR VI\n 15-12-21 22:36:24.248 -05 000000079 INF: Y Motor: Xmit 1D\n 15-12-21 22:36:24.248 -05 000000024 INF: FPGA: Recv ZMV 15-12-21 22:36:24.248 -05 000000068 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:36:24.248 -05 000000028 INF: Z Motor: MoveAndTrigger 'ZMV' command took 90.3017 ms 15-12-21 22:36:24.248 -05 000000028 INF: FPGA: Xmit ZDACR\n 15-12-21 22:36:24.248 -05 000000029 INF: ====================================== 15-12-21 22:36:24.280 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:24.299 -05 000000068 INF: ====================================== 15-12-21 22:36:24.316 -05 000000085 INF: FPGA: Recv ZDACR 32043 15-12-21 22:36:24.345 -05 000000028 INF: Z Motor: MoveAndTrigger took 317.5875 ms w/comms 15-12-21 22:36:24.346 -05 000000079 INF: Y Motor: Recv 1D\r\n 15-12-21 22:36:24.346 -05 000000028 INF: Z Motor: After move to -0.1222, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:36:24.346 -05 000000028 INF: Z Motor: MoveAbsStepped took 317.827 ms 15-12-21 22:36:24.346 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:24.347 -05 000000022 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:36:24.347 -05 000000022 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:36:24.347 -05 000000022 INF: X Motor: Moving to 75.9620 mm @15.000 mm/sec, started at 81.0288 mm 15-12-21 22:36:24.347 -05 000000081 INF: ====================================== 15-12-21 22:36:24.347 -05 000000022 INF: X Motor: Xmit MA 6948\n 15-12-21 22:36:24.398 -05 000000079 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:36:24.406 -05 000000079 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:36:24.406 -05 000000022 INF: X Motor: Recv MA 6948\r\n> 15-12-21 22:36:24.419 -05 000000022 INF: X Motor: WaitUntilStopped 60338 15-12-21 22:36:24.419 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:36:24.438 -05 000000085 INF: ===================Camera Arm TDI=================== 15-12-21 22:36:24.438 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:24.444 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:24.452 -05 000000063 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:36:24.460 -05 000000063 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:36:24.460 -05 000000063 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:36:24.531 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:24.531 -05 000000024 INF: FPGA: Recv ZSEL 15-12-21 22:36:24.545 -05 000000063 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:36:24.546 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:24.622 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:24.624 -05 000000063 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:36:24.655 -05 000000063 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:36:24.655 -05 000000063 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:36:24.696 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:24.697 -05 000000055 INF: FPGA: Recv ZSTEP 15-12-21 22:36:24.697 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:24.698 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:24.698 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:24.774 -05 000000063 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:36:24.774 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:24.778 -05 000000063 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:36:24.778 -05 000000063 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:36:24.778 -05 000000063 INF: Z Motor: Arming to move to -0.0822 mm 15-12-21 22:36:24.778 -05 000000063 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:36:24.852 -05 000000068 INF: FPGA: Recv ZYT 15-12-21 22:36:24.853 -05 000000063 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907643 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:36:24.853 -05 000000063 INF: FPGA: Xmit ZARM 21558\n 15-12-21 22:36:24.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:24.911 -05 000000056 INF: FPGA: Recv ZARM 15-12-21 22:36:24.911 -05 000000063 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 58.0459 ms 15-12-21 22:36:24.911 -05 000000063 INF: Z Motor: ArmAbsStepped took 132.837 ms 15-12-21 22:36:24.912 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:24.913 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:24.922 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:24.950 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:24.968 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:25.001 -05 000000063 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:36:25.002 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:25.014 -05 000000063 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:36:25.015 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:25.017 -05 000000063 INF: ====================================== 15-12-21 22:36:25.050 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:25.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:25.137 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:25.137 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:25.341 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:25.344 -05 000000022 INF: X Motor: Xmit PR ER\n 15-12-21 22:36:25.458 -05 000000022 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:36:25.458 -05 000000022 INF: X Motor: Moved to 75.9629 after 1039 ms 15-12-21 22:36:25.459 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:25.459 -05 000000022 INF: ====================================== 15-12-21 22:36:25.709 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:25.794 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:26.044 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:26.095 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:26.224 -05 000000085 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:36:26.224 -05 000000085 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:36:26.224 -05 000000085 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:36:26.345 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:26.408 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:26.408 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:36:26.508 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:36:26.515 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:26.535 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.986C:A1\r\n 15-12-21 22:36:26.535 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:26.599 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 22:36:26.599 -05 000000057 INF: Current Position of Pump is: 21120 15-12-21 22:36:26.599 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:36:26.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:26.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:26.658 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:26.699 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:36:26.760 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:26.781 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:26.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:26.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:26.881 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:26.890 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:26.972 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:26.973 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:26.973 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:27.102 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:27.156 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.899C:A1\r\n 15-12-21 22:36:27.156 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:27.222 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:27.282 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:27.282 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:27.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:36:27.283 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:27.352 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:36:27.352 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:27.461 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:36:27.534 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:27.534 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:27.642 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:27.657 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:36:27.657 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:27.670 -05 000000085 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:36:27.670 -05 000000085 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:36:27.671 -05 000000085 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:36:27.672 -05 000000085 INF: ====================================== 15-12-21 22:36:27.675 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:27.685 -05 000000028 INF: ====================================== 15-12-21 22:36:27.768 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:27.768 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:27.769 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:27.770 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:36:27.770 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:36:27.775 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°, FC temperature to 65°=================== 15-12-21 22:36:27.775 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:65.00\r 15-12-21 22:36:27.843 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:27.843 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:27.959 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:0:1\r 15-12-21 22:36:27.969 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:27.969 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:27.970 -05 000000079 INF: Y Motor: Moved to 70.6885 after 3565 ms 15-12-21 22:36:27.971 -05 000000079 INF: ====================================== 15-12-21 22:36:27.974 -05 000000078 INF: ===================Move X,Y=================== 15-12-21 22:36:27.979 -05 000000078 INF: ====================================== 15-12-21 22:36:27.992 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:28.024 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:28.024 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:36:28.095 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:36:28.096 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:36:28.151 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:36:28.152 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:36:28.153 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:36:28.154 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:36:28.155 -05 000000022 INF: FPGA: Recv ZFREQCL 15-12-21 22:36:28.156 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:36:28.156 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:28.156 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:36:28.157 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:28.157 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:28.159 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:28.159 -05 000000057 INF: WaitCommand(25000) start 15-12-21 22:36:28.159 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 25 of 25 seconds left=================== 15-12-21 22:36:28.225 -05 000000082 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:36:28.225 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:36:28.227 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:28.228 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:28.274 -05 000000023 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:36:28.275 -05 000000023 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:36:28.275 -05 000000022 INF: ===================TDI FPGA Arm=================== 15-12-21 22:36:28.281 -05 000000022 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:28.283 -05 000000022 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:36:28.284 -05 000000022 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:36:28.346 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:28.347 -05 000000080 INF: FPGA: Recv TDIYPOS 15-12-21 22:36:28.347 -05 000000022 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:28.348 -05 000000023 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:36:28.351 -05 000000023 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:36:28.354 -05 000000023 INF: ====================================== 15-12-21 22:36:28.355 -05 000000022 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:36:28.355 -05 000000022 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:36:28.405 -05 000000023 INF: FPGA: Recv TDIYARM3 15-12-21 22:36:28.406 -05 000000022 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:28.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:28.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:28.410 -05 000000022 INF: ===================TDI FPGA Arm=================== 15-12-21 22:36:28.413 -05 000000022 INF: ====================================== 15-12-21 22:36:28.432 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:28.437 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:28.437 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:28.438 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:28.440 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:28.446 -05 000000055 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:36:28.446 -05 000000024 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:36:28.447 -05 000000055 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:36:28.447 -05 000000055 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:36:28.447 -05 000000055 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:36:28.447 -05 000000055 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:36:28.447 -05 000000024 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:36:28.447 -05 000000024 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:36:28.447 -05 000000024 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:36:28.450 -05 000000024 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:36:28.551 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:28.595 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:28.595 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:28.642 -05 000000078 INF: FPGA: Recv EX1MV 15-12-21 22:36:28.642 -05 000000024 INF: Excitation Filter 1: Moved -36 steps in 194.9868 ms 15-12-21 22:36:28.642 -05 000000024 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 195.1105 ms 15-12-21 22:36:28.643 -05 000000024 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 195.361 ms 15-12-21 22:36:28.644 -05 000000024 INF: ====================================== 15-12-21 22:36:28.710 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:28.720 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:28.720 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:28.750 -05 000000071 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207=================== 15-12-21 22:36:28.787 -05 000000011 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207, Registering and Extracting C040 L002 T1209=================== 15-12-21 22:36:28.791 -05 000000094 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207=================== 15-12-21 22:36:28.825 -05 000000080 INF: FPGA: Recv EX2MV 15-12-21 22:36:28.825 -05 000000055 INF: Excitation Filter 2: Moved -107 steps in 378.1531 ms 15-12-21 22:36:28.825 -05 000000055 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 378.2618 ms 15-12-21 22:36:28.825 -05 000000055 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 378.3581 ms 15-12-21 22:36:28.826 -05 000000055 INF: ====================================== 15-12-21 22:36:28.828 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:28.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:28.841 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 22:36:28.842 -05 000000056 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:36:28.844 -05 000000079 INF: ===================FPGA Z Wait=================== 15-12-21 22:36:28.844 -05 000000068 INF: ===================Move Y Motor without settling=================== 15-12-21 22:36:28.856 -05 000000079 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:36:28.856 -05 000000068 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:36:28.857 -05 000000068 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:36:28.870 -05 000000056 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:36:28.870 -05 000000023 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:36:28.871 -05 000000056 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:36:28.871 -05 000000068 INF: Y Motor: Xmit 1G\n 15-12-21 22:36:28.881 -05 000000081 INF: ===================Camera TDI=================== 15-12-21 22:36:28.881 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:36:28.892 -05 000000066 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207, Registering and Extracting C040 L002 T1210=================== 15-12-21 22:36:28.906 -05 000000068 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:36:28.907 -05 000000068 INF: Y Motor: Recv 1G\r\n 15-12-21 22:36:28.908 -05 000000068 INF: Y Motor: Xmit 1D\n 15-12-21 22:36:28.931 -05 000000065 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207=================== 15-12-21 22:36:28.966 -05 000000068 INF: Y Motor: Recv 1D\r\n 15-12-21 22:36:28.967 -05 000000068 INF: Y Motor: Recv *407662\r\n 15-12-21 22:36:28.969 -05 000000068 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:36:28.989 -05 000000038 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207, Registering and Extracting C040 L002 T1211=================== 15-12-21 22:36:29.160 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:29.160 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 24 of 25 seconds left=================== 15-12-21 22:36:29.198 -05 000000029 INF: FPGA: Recv ZWAIT 15-12-21 22:36:29.199 -05 000000079 INF: ====================================== 15-12-21 22:36:29.314 -05 000000075 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207=================== 15-12-21 22:36:29.356 -05 000000028 INF: ===================Frame #3=================== 15-12-21 22:36:29.383 -05 000000081 INF: ===================Frame #5=================== 15-12-21 22:36:29.401 -05 000000077 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207, Registering and Extracting C040 L002 T1212=================== 15-12-21 22:36:29.459 -05 000000074 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1207=================== 15-12-21 22:36:29.477 -05 000000089 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206=================== 15-12-21 22:36:29.501 -05 000000040 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1213, Registering and Extracting C040 L002 T1214=================== 15-12-21 22:36:29.501 -05 000000051 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1213, Registering and Extracting C040 L002 T1214=================== 15-12-21 22:36:29.507 -05 000000028 INF: ===================Frame #15=================== 15-12-21 22:36:29.533 -05 000000081 INF: ===================Frame #17=================== 15-12-21 22:36:29.543 -05 000000009 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1213=================== 15-12-21 22:36:29.552 -05 000000060 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206=================== 15-12-21 22:36:29.601 -05 000000027 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1215, Registering and Extracting C040 L002 T1216=================== 15-12-21 22:36:29.602 -05 000000048 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1215, Registering and Extracting C040 L002 T1216=================== 15-12-21 22:36:29.622 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:29.671 -05 000000028 INF: ===================Frame #28=================== 15-12-21 22:36:29.673 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:36:29.673 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:29.683 -05 000000081 INF: ===================Frame #29=================== 15-12-21 22:36:29.838 -05 000000081 INF: ===================Frame #41=================== 15-12-21 22:36:29.989 -05 000000081 INF: ===================Frame #53=================== 15-12-21 22:36:30.007 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:30.019 -05 000000028 INF: ===================Frame #55=================== 15-12-21 22:36:30.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:30.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:30.188 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:30.188 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 23 of 25 seconds left=================== 15-12-21 22:36:30.188 -05 000000081 INF: ===================Frame #69=================== 15-12-21 22:36:30.189 -05 000000028 INF: ===================Frame #69=================== 15-12-21 22:36:30.227 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:30.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:30.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:30.339 -05 000000081 INF: ===================Frame #81=================== 15-12-21 22:36:30.340 -05 000000028 INF: ===================Frame #81=================== 15-12-21 22:36:30.365 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:30.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:30.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:30.490 -05 000000081 INF: ===================Frame #93=================== 15-12-21 22:36:30.490 -05 000000028 INF: ===================Frame #92=================== 15-12-21 22:36:30.670 -05 000000081 INF: ===================Frame #107=================== 15-12-21 22:36:30.820 -05 000000081 INF: ===================Frame #119=================== 15-12-21 22:36:30.971 -05 000000081 INF: ===================Frame #131=================== 15-12-21 22:36:31.123 -05 000000081 INF: ===================Frame #142=================== 15-12-21 22:36:31.171 -05 000000028 INF: ===================Frame #143=================== 15-12-21 22:36:31.189 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:31.189 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 22 of 25 seconds left=================== 15-12-21 22:36:31.322 -05 000000028 INF: ===================Frame #158=================== 15-12-21 22:36:31.798 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:31.852 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.017C:A1\r\n 15-12-21 22:36:31.852 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:31.970 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:32.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:32.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:32.143 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:32.164 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:32.164 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:32.189 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:32.189 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 21 of 25 seconds left=================== 15-12-21 22:36:32.223 -05 000000028 INF: ===================Frame #230=================== 15-12-21 22:36:32.265 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:32.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:32.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:32.381 -05 000000081 INF: ===================Frame #242=================== 15-12-21 22:36:32.389 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:32.415 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 62.661C:A1\r\n 15-12-21 22:36:32.415 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:32.546 -05 000000028 INF: ===================Frame #255=================== 15-12-21 22:36:32.696 -05 000000028 INF: ===================Frame #267=================== 15-12-21 22:36:32.795 -05 000000081 INF: ===================Frame #275=================== 15-12-21 22:36:32.847 -05 000000028 INF: ===================Frame #279=================== 15-12-21 22:36:32.946 -05 000000081 INF: ===================Frame #287=================== 15-12-21 22:36:32.997 -05 000000028 INF: ===================Frame #291=================== 15-12-21 22:36:33.100 -05 000000081 INF: ===================Frame #299=================== 15-12-21 22:36:33.148 -05 000000028 INF: ===================Frame #303=================== 15-12-21 22:36:33.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:33.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 20 of 25 seconds left=================== 15-12-21 22:36:33.250 -05 000000081 INF: ===================Frame #311=================== 15-12-21 22:36:33.299 -05 000000028 INF: ===================Frame #315=================== 15-12-21 22:36:33.400 -05 000000081 INF: ===================Frame #323=================== 15-12-21 22:36:33.446 -05 000000011 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206, Registering and Extracting C040 L002 T1215=================== 15-12-21 22:36:33.450 -05 000000028 INF: ===================Frame #327=================== 15-12-21 22:36:33.528 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:33.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:33.537 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:33.550 -05 000000081 INF: ===================Frame #334=================== 15-12-21 22:36:33.600 -05 000000028 INF: ===================Frame #338=================== 15-12-21 22:36:33.656 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:33.727 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:33.727 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:33.749 -05 000000066 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205, Registering and Extracting C040 L002 T1206=================== 15-12-21 22:36:33.808 -05 000000038 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204, Registering and Extracting C040 L002 T1205=================== 15-12-21 22:36:33.833 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:33.915 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:33.915 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:33.981 -05 000000081 INF: ===================Frame #369=================== 15-12-21 22:36:34.057 -05 000000028 INF: ===================Frame #375=================== 15-12-21 22:36:34.131 -05 000000081 INF: ===================Frame #380=================== 15-12-21 22:36:34.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:34.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 19 of 25 seconds left=================== 15-12-21 22:36:34.207 -05 000000028 INF: ===================Frame #386=================== 15-12-21 22:36:34.339 -05 000000081 INF: ===================Frame #397=================== 15-12-21 22:36:34.414 -05 000000028 INF: ===================Frame #403=================== 15-12-21 22:36:34.489 -05 000000081 INF: ===================Frame #409=================== 15-12-21 22:36:34.564 -05 000000028 INF: ===================Frame #415=================== 15-12-21 22:36:34.641 -05 000000081 INF: ===================Frame #421=================== 15-12-21 22:36:34.714 -05 000000028 INF: ===================Frame #426=================== 15-12-21 22:36:34.779 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:34.791 -05 000000081 INF: ===================Frame #433=================== 15-12-21 22:36:34.848 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:36:34.848 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:34.910 -05 000000028 INF: ===================Frame #442=================== 15-12-21 22:36:34.941 -05 000000081 INF: ===================Frame #444=================== 15-12-21 22:36:35.078 -05 000000028 INF: ===================Frame #455=================== 15-12-21 22:36:35.169 -05 000000081 INF: ===================Frame #462=================== 15-12-21 22:36:35.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:35.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 18 of 25 seconds left=================== 15-12-21 22:36:35.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:35.222 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:35.222 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:35.228 -05 000000028 INF: ===================Frame #467=================== 15-12-21 22:36:35.229 -05 000000077 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203, Registering and Extracting C040 L002 T1204=================== 15-12-21 22:36:35.273 -05 000000051 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202, Registering and Extracting C040 L002 T1203=================== 15-12-21 22:36:35.276 -05 000000048 INF: ===================Registering and Extracting C040 L002 T1201, Registering and Extracting C040 L002 T1202=================== 15-12-21 22:36:35.323 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:35.339 -05 000000081 INF: ===================Frame #476=================== 15-12-21 22:36:35.346 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:35.346 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:35.369 -05 000000027 INF: ===================Registering and Extracting C040 L002 T1201=================== 15-12-21 22:36:35.378 -05 000000028 INF: ===================Frame #479=================== 15-12-21 22:36:35.420 -05 000000040 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:36:35.451 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:35.473 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:35.473 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:35.507 -05 000000081 INF: ===================Frame #489=================== 15-12-21 22:36:35.509 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:35.514 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:36:35.528 -05 000000028 INF: ===================Frame #491=================== 15-12-21 22:36:35.611 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:35.619 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:36:35.657 -05 000000081 INF: ===================Frame #501=================== 15-12-21 22:36:35.678 -05 000000028 INF: ===================Frame #503=================== 15-12-21 22:36:35.725 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:35.730 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:36:35.808 -05 000000081 INF: ===================Frame #513=================== 15-12-21 22:36:35.828 -05 000000028 INF: ===================Frame #515=================== 15-12-21 22:36:35.941 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:35.946 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:36:35.958 -05 000000081 INF: ===================Frame #525=================== 15-12-21 22:36:35.978 -05 000000028 INF: ===================Frame #526=================== 15-12-21 22:36:36.051 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:36.108 -05 000000081 INF: ===================Frame #537=================== 15-12-21 22:36:36.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:36.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 17 of 25 seconds left=================== 15-12-21 22:36:36.259 -05 000000081 INF: ===================Frame #549=================== 15-12-21 22:36:36.270 -05 000000028 INF: ===================Frame #549=================== 15-12-21 22:36:36.409 -05 000000081 INF: ===================Frame #560=================== 15-12-21 22:36:36.420 -05 000000028 INF: ===================Frame #561=================== 15-12-21 22:36:36.570 -05 000000028 INF: ===================Frame #573=================== 15-12-21 22:36:36.700 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:36.719 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:36.719 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:36.720 -05 000000028 INF: ===================Frame #585=================== 15-12-21 22:36:36.720 -05 000000081 INF: ===================Frame #585=================== 15-12-21 22:36:36.824 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:36.870 -05 000000081 INF: ===================Frame #597=================== 15-12-21 22:36:36.870 -05 000000028 INF: ===================Frame #597=================== 15-12-21 22:36:36.872 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:36:36.907 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:36.907 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:37.013 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:37.020 -05 000000081 INF: ===================Frame #609=================== 15-12-21 22:36:37.021 -05 000000028 INF: ===================Frame #609=================== 15-12-21 22:36:37.032 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.021C:A1\r\n 15-12-21 22:36:37.032 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:37.140 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:37.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:37.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:37.170 -05 000000081 INF: ===================Frame #621=================== 15-12-21 22:36:37.171 -05 000000028 INF: ===================Frame #621=================== 15-12-21 22:36:37.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:37.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 16 of 25 seconds left=================== 15-12-21 22:36:37.320 -05 000000081 INF: ===================Frame #632=================== 15-12-21 22:36:37.321 -05 000000028 INF: ===================Frame #633=================== 15-12-21 22:36:37.471 -05 000000028 INF: ===================Frame #644=================== 15-12-21 22:36:37.516 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:37.558 -05 000000081 INF: ===================Frame #651=================== 15-12-21 22:36:37.593 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.558C:A1\r\n 15-12-21 22:36:37.593 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:37.708 -05 000000081 INF: ===================Frame #663=================== 15-12-21 22:36:37.807 -05 000000028 INF: ===================Frame #671=================== 15-12-21 22:36:37.858 -05 000000081 INF: ===================Frame #675=================== 15-12-21 22:36:37.957 -05 000000028 INF: ===================Frame #683=================== 15-12-21 22:36:38.008 -05 000000081 INF: ===================Frame #687=================== 15-12-21 22:36:38.107 -05 000000028 INF: ===================Frame #695=================== 15-12-21 22:36:38.158 -05 000000081 INF: ===================Frame #699=================== 15-12-21 22:36:38.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:38.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 15 of 25 seconds left=================== 15-12-21 22:36:38.257 -05 000000028 INF: ===================Frame #707=================== 15-12-21 22:36:38.308 -05 000000081 INF: ===================Frame #711=================== 15-12-21 22:36:38.407 -05 000000028 INF: ===================Frame #718=================== 15-12-21 22:36:38.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:38.459 -05 000000081 INF: ===================Frame #723=================== 15-12-21 22:36:38.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:38.467 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:38.574 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:38.592 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:38.592 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:38.610 -05 000000081 INF: ===================Frame #734=================== 15-12-21 22:36:38.658 -05 000000028 INF: ===================Frame #738=================== 15-12-21 22:36:38.695 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:38.718 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:38.718 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:38.856 -05 000000028 INF: ===================Frame #754=================== 15-12-21 22:36:38.924 -05 000000081 INF: ===================Frame #759=================== 15-12-21 22:36:39.027 -05 000000028 INF: ===================Frame #767=================== 15-12-21 22:36:39.074 -05 000000081 INF: ===================Frame #771=================== 15-12-21 22:36:39.177 -05 000000028 INF: ===================Frame #779=================== 15-12-21 22:36:39.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:39.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 14 of 25 seconds left=================== 15-12-21 22:36:39.224 -05 000000081 INF: ===================Frame #783=================== 15-12-21 22:36:39.329 -05 000000028 INF: ===================Frame #791=================== 15-12-21 22:36:39.374 -05 000000081 INF: ===================Frame #795=================== 15-12-21 22:36:39.480 -05 000000028 INF: ===================Frame #803=================== 15-12-21 22:36:39.524 -05 000000081 INF: ===================Frame #807=================== 15-12-21 22:36:39.630 -05 000000028 INF: ===================Frame #815=================== 15-12-21 22:36:39.674 -05 000000081 INF: ===================Frame #819=================== 15-12-21 22:36:39.781 -05 000000028 INF: ===================Frame #827=================== 15-12-21 22:36:39.826 -05 000000081 INF: ===================Frame #831=================== 15-12-21 22:36:39.931 -05 000000028 INF: ===================Frame #839=================== 15-12-21 22:36:39.945 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:39.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:39.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:39.976 -05 000000081 INF: ===================Frame #843=================== 15-12-21 22:36:40.064 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:40.081 -05 000000028 INF: ===================Frame #851=================== 15-12-21 22:36:40.088 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:36:40.088 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:40.126 -05 000000081 INF: ===================Frame #854=================== 15-12-21 22:36:40.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:40.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:40.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 13 of 25 seconds left=================== 15-12-21 22:36:40.215 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:40.215 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:40.231 -05 000000028 INF: ===================Frame #863=================== 15-12-21 22:36:40.320 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:40.340 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:40.340 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:40.381 -05 000000028 INF: ===================Frame #874=================== 15-12-21 22:36:40.433 -05 000000081 INF: ===================Frame #879=================== 15-12-21 22:36:40.584 -05 000000081 INF: ===================Frame #891=================== 15-12-21 22:36:40.680 -05 000000028 INF: ===================Frame #898=================== 15-12-21 22:36:40.736 -05 000000081 INF: ===================Frame #902=================== 15-12-21 22:36:40.860 -05 000000028 INF: ===================Frame #912=================== 15-12-21 22:36:40.942 -05 000000081 INF: ===================Frame #919=================== 15-12-21 22:36:41.026 -05 000000028 INF: ===================Frame #926=================== 15-12-21 22:36:41.092 -05 000000081 INF: ===================Frame #931=================== 15-12-21 22:36:41.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:41.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 12 of 25 seconds left=================== 15-12-21 22:36:41.192 -05 000000028 INF: ===================Frame #939=================== 15-12-21 22:36:41.242 -05 000000081 INF: ===================Frame #943=================== 15-12-21 22:36:41.342 -05 000000028 INF: ===================Frame #950=================== 15-12-21 22:36:41.392 -05 000000081 INF: ===================Frame #954=================== 15-12-21 22:36:41.519 -05 000000028 INF: ===================Frame #964=================== 15-12-21 22:36:41.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:41.587 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:41.587 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:41.606 -05 000000081 INF: ===================Frame #971=================== 15-12-21 22:36:41.685 -05 000000028 INF: ===================Frame #978=================== 15-12-21 22:36:41.695 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:41.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:41.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:41.756 -05 000000081 INF: ===================Frame #983=================== 15-12-21 22:36:41.817 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:41.835 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:41.835 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:41.852 -05 000000028 INF: ===================Frame #991=================== 15-12-21 22:36:41.906 -05 000000081 INF: ===================Frame #995=================== 15-12-21 22:36:42.002 -05 000000028 INF: ===================Frame #1003=================== 15-12-21 22:36:42.056 -05 000000081 INF: ===================Frame #1007=================== 15-12-21 22:36:42.140 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:42.152 -05 000000028 INF: ===================Frame #1015=================== 15-12-21 22:36:42.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:42.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 11 of 25 seconds left=================== 15-12-21 22:36:42.206 -05 000000081 INF: ===================Frame #1019=================== 15-12-21 22:36:42.210 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.001C:A1\r\n 15-12-21 22:36:42.210 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:42.302 -05 000000028 INF: ===================Frame #1026=================== 15-12-21 22:36:42.356 -05 000000081 INF: ===================Frame #1031=================== 15-12-21 22:36:42.506 -05 000000081 INF: ===================Frame #1043=================== 15-12-21 22:36:42.514 -05 000000028 INF: ===================Frame #1043=================== 15-12-21 22:36:42.656 -05 000000081 INF: ===================Frame #1054=================== 15-12-21 22:36:42.664 -05 000000028 INF: ===================Frame #1055=================== 15-12-21 22:36:42.696 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:42.771 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 66.159C:A1\r\n 15-12-21 22:36:42.771 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:42.814 -05 000000028 INF: ===================Frame #1067=================== 15-12-21 22:36:42.929 -05 000000081 INF: ===================Frame #1076=================== 15-12-21 22:36:42.964 -05 000000028 INF: ===================Frame #1079=================== 15-12-21 22:36:43.068 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:43.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:43.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:43.107 -05 000000081 INF: ===================Frame #1090=================== 15-12-21 22:36:43.114 -05 000000028 INF: ===================Frame #1091=================== 15-12-21 22:36:43.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:43.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 10 of 25 seconds left=================== 15-12-21 22:36:43.193 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:43.264 -05 000000028 INF: ===================Frame #1102=================== 15-12-21 22:36:43.270 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:43.270 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:43.273 -05 000000081 INF: ===================Frame #1103=================== 15-12-21 22:36:43.375 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:43.396 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:43.396 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:43.424 -05 000000081 INF: ===================Frame #1115=================== 15-12-21 22:36:43.507 -05 000000028 INF: ===================Frame #1122=================== 15-12-21 22:36:43.574 -05 000000081 INF: ===================Frame #1127=================== 15-12-21 22:36:43.681 -05 000000028 INF: ===================Frame #1135=================== 15-12-21 22:36:43.724 -05 000000081 INF: ===================Frame #1139=================== 15-12-21 22:36:43.831 -05 000000028 INF: ===================Frame #1147=================== 15-12-21 22:36:43.874 -05 000000081 INF: ===================Frame #1151=================== 15-12-21 22:36:43.981 -05 000000028 INF: ===================Frame #1159=================== 15-12-21 22:36:44.024 -05 000000081 INF: ===================Frame #1163=================== 15-12-21 22:36:44.131 -05 000000028 INF: ===================Frame #1171=================== 15-12-21 22:36:44.174 -05 000000081 INF: ===================Frame #1174=================== 15-12-21 22:36:44.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:44.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 9 of 25 seconds left=================== 15-12-21 22:36:44.281 -05 000000028 INF: ===================Frame #1183=================== 15-12-21 22:36:44.427 -05 000000081 INF: ===================Frame #1194=================== 15-12-21 22:36:44.431 -05 000000028 INF: ===================Frame #1195=================== 15-12-21 22:36:44.581 -05 000000028 INF: ===================Frame #1207=================== 15-12-21 22:36:44.605 -05 000000081 INF: ===================Frame #1208=================== 15-12-21 22:36:44.690 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:44.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:44.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:44.732 -05 000000028 INF: ===================Frame #1219=================== 15-12-21 22:36:44.772 -05 000000081 INF: ===================Frame #1222=================== 15-12-21 22:36:44.812 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:44.831 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:44.831 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:44.882 -05 000000028 INF: ===================Frame #1230=================== 15-12-21 22:36:44.938 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:44.940 -05 000000081 INF: ===================Frame #1235=================== 15-12-21 22:36:44.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:44.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:45.090 -05 000000081 INF: ===================Frame #1247=================== 15-12-21 22:36:45.142 -05 000000085 INF: FPGA: Recv TDIYWAIT 15-12-21 22:36:45.142 -05 000000056 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:36:45.144 -05 000000056 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:36:45.145 -05 000000063 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:36:45.146 -05 000000063 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:36:45.146 -05 000000063 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:36:45.146 -05 000000063 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:36:45.150 -05 000000079 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:36:45.152 -05 000000063 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:36:45.152 -05 000000079 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:36:45.152 -05 000000079 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:36:45.154 -05 000000079 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:36:45.155 -05 000000079 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:36:45.164 -05 000000028 INF: ===================Frame #1250=================== 15-12-21 22:36:45.187 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:45.189 -05 000000028 INF: Camera complete - got 1250 frames. 15-12-21 22:36:45.190 -05 000000028 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:36:45.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:45.190 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 8 of 25 seconds left=================== 15-12-21 22:36:45.206 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:36:45.206 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:45.314 -05 000000081 INF: ===================Frame #1250=================== 15-12-21 22:36:45.314 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:36:45.328 -05 000000082 INF: FPGA: Recv EX1MV 15-12-21 22:36:45.329 -05 000000063 INF: Excitation Filter 1: Moved 36 steps in 182.8114 ms 15-12-21 22:36:45.329 -05 000000063 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 182.9088 ms 15-12-21 22:36:45.329 -05 000000063 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 182.9977 ms 15-12-21 22:36:45.329 -05 000000063 INF: ====================================== 15-12-21 22:36:45.340 -05 000000028 INF: ====================================== 15-12-21 22:36:45.356 -05 000000081 INF: Camera complete - got 1250 frames. 15-12-21 22:36:45.358 -05 000000081 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:36:45.477 -05 000000081 INF: ===================Camera TDI=================== 15-12-21 22:36:45.500 -05 000000081 INF: ====================================== 15-12-21 22:36:45.501 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 22:36:45.507 -05 000000023 INF: ====================================== 15-12-21 22:36:45.579 -05 000000049 INF: FPGA: Recv EX2MV 15-12-21 22:36:45.579 -05 000000079 INF: Excitation Filter 2: Moved 107 steps in 425.6222 ms 15-12-21 22:36:45.579 -05 000000079 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 427.3195 ms 15-12-21 22:36:45.579 -05 000000079 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 427.385 ms 15-12-21 22:36:45.580 -05 000000079 INF: ====================================== 15-12-21 22:36:45.585 -05 000000056 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:36:45.588 -05 000000056 INF: ====================================== 15-12-21 22:36:45.709 -05 000000068 INF: Y Motor: Moved to 9.0765 after 16741 ms 15-12-21 22:36:45.710 -05 000000068 INF: ====================================== 15-12-21 22:36:45.711 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:45.713 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:45.715 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:45.715 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:36:45.836 -05 000000082 INF: FPGA: Recv TDICLINES 9516 15-12-21 22:36:45.837 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:36:45.900 -05 000000068 INF: FPGA: Recv TDIYERD 907649 15-12-21 22:36:45.908 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:36:45.960 -05 000000056 INF: FPGA: Recv ZADCR 25274 15-12-21 22:36:45.985 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.096. Y moved -60.304 mm 15-12-21 22:36:45.994 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:36:46.046 -05 000000056 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:36:46.046 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:36:46.080 -05 000000062 INF: TDIScan finished after 22085.559 ms 15-12-21 22:36:46.080 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:36:46.081 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:36:46.194 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.203 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:46.212 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 7 of 25 seconds left=================== 15-12-21 22:36:46.239 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.062 um 15-12-21 22:36:46.240 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.243 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.247 -05 000000082 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:36:46.247 -05 000000085 INF: ===================Dither Clean Up Command=================== 15-12-21 22:36:46.247 -05 000000049 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:36:46.247 -05 000000079 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:36:46.248 -05 000000082 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:36:46.248 -05 000000079 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:36:46.248 -05 000000079 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:36:46.250 -05 000000078 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:36:46.250 -05 000000023 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:46.250 -05 000000023 INF: ===================LFT:Extracting coords=================== 15-12-21 22:36:46.251 -05 000000078 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:36:46.284 -05 000000082 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:36:46.285 -05 000000082 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:36:46.285 -05 000000049 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:36:46.286 -05 000000082 INF: ====================================== 15-12-21 22:36:46.292 -05 000000023 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:46.297 -05 000000055 INF: FPGA: Recv ZSTEP 15-12-21 22:36:46.297 -05 000000055 INF: FPGA: Recv ZSEL 15-12-21 22:36:46.297 -05 000000078 INF: FPGA: Xmit ZDACW 32043\n 15-12-21 22:36:46.297 -05 000000079 INF: ====================================== 15-12-21 22:36:46.297 -05 000000023 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:36:46.299 -05 000000080 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:46.299 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:46.299 -05 000000080 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:46.299 -05 000000081 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:46.299 -05 000000063 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:46.299 -05 000000081 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:46.300 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:46.300 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:36:46.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:46.344 -05 000000049 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:36:46.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:46.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:46.350 -05 000000049 INF: ====================================== 15-12-21 22:36:46.417 -05 000000029 INF: FPGA: Recv ZDACW 15-12-21 22:36:46.418 -05 000000078 INF: ====================================== 15-12-21 22:36:46.484 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:46.499 -05 000000080 INF: LFT found best fwhm score 2.537569 in 159 ms 15-12-21 22:36:46.499 -05 000000080 INF: LFT found good score at index 6233 with fwhm value 2.537569. Next cycle, cycle 41 starting Z position for bottom surface is at -0.101 mm FC:B, C:40,L:1,B 15-12-21 22:36:46.499 -05 000000080 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:46.499 -05 000000081 INF: LFT found best fwhm score 2.50236 in 159 ms 15-12-21 22:36:46.499 -05 000000081 INF: LFT found good score at index 5505 with fwhm value 2.50236. Next cycle, cycle 41 starting Z position for bottom surface is at -0.101 mm FC:B, C:40,L:1,B 15-12-21 22:36:46.499 -05 000000081 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:46.499 -05 000000080 INF: ====================================== 15-12-21 22:36:46.499 -05 000000081 INF: ====================================== 15-12-21 22:36:46.501 -05 000000056 INF: LFT found best fwhm score 2.319941 in 159 ms 15-12-21 22:36:46.501 -05 000000056 INF: LFT found good score at index 7001 with fwhm value 2.319941. Next cycle, cycle 41 starting Z position for bottom surface is at -0.101 mm FC:B, C:40,L:1,B 15-12-21 22:36:46.501 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:46.504 -05 000000056 INF: ====================================== 15-12-21 22:36:46.518 -05 000000063 INF: LFT found best fwhm score 2.410606 in 180 ms 15-12-21 22:36:46.518 -05 000000063 INF: LFT found good score at index 5657 with fwhm value 2.410606. Next cycle, cycle 41 starting Z position for bottom surface is at -0.101 mm FC:B, C:40,L:1,B 15-12-21 22:36:46.518 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:36:46.519 -05 000000063 INF: ====================================== 15-12-21 22:36:46.526 -05 000000023 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:36:46.528 -05 000000023 INF: LFT weighted average best Z for bottom surface is at -0.101mm FC:B, C:40,L:1,B 15-12-21 22:36:46.528 -05 000000023 INF: ====================================== 15-12-21 22:36:46.532 -05 000000085 INF: ====================================== 15-12-21 22:36:46.533 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.535 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:36:46.536 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.536 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:36:46.536 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.536 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:36:46.538 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.538 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:36:46.538 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.539 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:36:46.539 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:36:46.541 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 7 of 25 seconds left, Waiting for image analysis=================== 15-12-21 22:36:46.541 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 7 of 25 seconds left=================== 15-12-21 22:36:46.542 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:36:46.542 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 75.96201 Y = 39.38=================== 15-12-21 22:36:46.542 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:36:46.542 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:36:46.543 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:36:46.543 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:46.543 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:36:46.544 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:36:46.547 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:46.547 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:46.568 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.568 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:36:46.568 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:46.568 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -122.2 um, section = A_1 15-12-21 22:36:46.572 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:46.573 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:46.575 -05 000000068 INF: ===================Move X,Y=================== 15-12-21 22:36:46.575 -05 000000023 INF: ===================MoveEmissionFilters=================== 15-12-21 22:36:46.575 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:46.575 -05 000000068 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:36:46.575 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:36:46.576 -05 000000029 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:36:46.576 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:46.576 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:36:46.578 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:36:46.578 -05 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:36:46.578 -05 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:36:46.586 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:36:46.586 -05 000000085 INF: ===================Move X Motor without settling=================== 15-12-21 22:36:46.586 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:36:46.586 -05 000000085 INF: X Motor: Xmit PR VM\n 15-12-21 22:36:46.586 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:36:46.586 -05 000000024 INF: ===================Move Y Motor without settling=================== 15-12-21 22:36:46.587 -05 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:36:46.587 -05 000000024 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:36:46.587 -05 000000024 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:36:46.587 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:46.588 -05 000000049 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:36:46.588 -05 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:36:46.588 -05 000000049 INF: ====================================== 15-12-21 22:36:46.588 -05 000000081 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:36:46.589 -05 000000055 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:36:46.589 -05 000000028 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:36:46.589 -05 000000024 INF: Y Motor: Xmit 1G\n 15-12-21 22:36:46.589 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:46.589 -05 000000081 INF: ====================================== 15-12-21 22:36:46.589 -05 000000055 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:36:46.589 -05 000000028 INF: ====================================== 15-12-21 22:36:46.589 -05 000000055 INF: ====================================== 15-12-21 22:36:46.591 -05 000000049 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:36:46.591 -05 000000080 INF: ===================Camera Arm TDI=================== 15-12-21 22:36:46.591 -05 000000079 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:36:46.591 -05 000000049 INF: ====================================== 15-12-21 22:36:46.592 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:36:46.592 -05 000000079 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:36:46.592 -05 000000079 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:36:46.598 -05 000000081 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:36:46.598 -05 000000056 INF: ====================================== 15-12-21 22:36:46.599 -05 000000028 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:36:46.599 -05 000000049 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:36:46.600 -05 000000081 INF: ====================================== 15-12-21 22:36:46.600 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:36:46.601 -05 000000028 INF: ====================================== 15-12-21 22:36:46.601 -05 000000049 INF: ====================================== 15-12-21 22:36:46.602 -05 000000082 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:36:46.602 -05 000000063 INF: ====================================== 15-12-21 22:36:46.603 -05 000000078 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:36:46.605 -05 000000082 INF: ====================================== 15-12-21 22:36:46.606 -05 000000078 INF: ====================================== 15-12-21 22:36:46.614 -05 000000028 INF: FPGA: Recv ZSEL 15-12-21 22:36:46.615 -05 000000079 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:36:46.615 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:46.615 -05 000000023 INF: ====================================== 15-12-21 22:36:46.689 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:46.690 -05 000000079 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:36:46.690 -05 000000079 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:36:46.690 -05 000000079 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:36:46.691 -05 000000085 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:36:46.691 -05 000000085 INF: X Motor: Xmit PR VI\n 15-12-21 22:36:46.694 -05 000000024 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:36:46.695 -05 000000024 INF: Y Motor: Recv 1G\r\n 15-12-21 22:36:46.696 -05 000000024 INF: Y Motor: Xmit 1D\n 15-12-21 22:36:46.724 -05 000000051 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103=================== 15-12-21 22:36:46.724 -05 000000027 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103=================== 15-12-21 22:36:46.724 -05 000000040 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104=================== 15-12-21 22:36:46.724 -05 000000077 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105=================== 15-12-21 22:36:46.724 -05 000000038 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106=================== 15-12-21 22:36:46.724 -05 000000048 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103=================== 15-12-21 22:36:46.725 -05 000000066 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2107=================== 15-12-21 22:36:46.725 -05 000000011 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2107, Registering and Extracting C040 L001 T2108=================== 15-12-21 22:36:46.747 -05 000000056 INF: FPGA: Recv ZSTEP 15-12-21 22:36:46.748 -05 000000024 INF: Y Motor: Recv 1D\r\n 15-12-21 22:36:46.748 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:46.749 -05 000000085 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:36:46.749 -05 000000085 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:36:46.749 -05 000000024 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:36:46.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:46.749 -05 000000085 INF: X Motor: Moving to 76.7340 mm @15.000 mm/sec, started at 75.9629 mm 15-12-21 22:36:46.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:46.749 -05 000000085 INF: X Motor: Xmit MA 7264\n 15-12-21 22:36:46.750 -05 000000024 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:36:46.756 -05 000000079 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:36:46.757 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:46.761 -05 000000079 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:36:46.761 -05 000000079 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:36:46.761 -05 000000079 INF: Z Motor: Arming to move to -0.0822 mm 15-12-21 22:36:46.761 -05 000000079 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:36:46.809 -05 000000028 INF: FPGA: Recv ZYT 15-12-21 22:36:46.809 -05 000000079 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907647 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:36:46.809 -05 000000079 INF: FPGA: Xmit ZARM 21558\n 15-12-21 22:36:46.811 -05 000000085 INF: X Motor: Recv MA 7264\r\n> 15-12-21 22:36:46.811 -05 000000085 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:36:46.874 -05 000000023 INF: FPGA: Recv ZARM 15-12-21 22:36:46.874 -05 000000079 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 64.7948 ms 15-12-21 22:36:46.874 -05 000000079 INF: Z Motor: ArmAbsStepped took 113.273 ms 15-12-21 22:36:46.875 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:36:46.879 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:46.991 -05 000000079 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:36:47.032 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:47.035 -05 000000079 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:36:47.036 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:36:47.063 -05 000000079 INF: ====================================== 15-12-21 22:36:47.240 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:47.240 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 6 of 25 seconds left=================== 15-12-21 22:36:47.319 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:47.378 -05 000000085 INF: X Motor: Xmit PR ER\n 15-12-21 22:36:47.379 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.997C:A1\r\n 15-12-21 22:36:47.379 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:47.477 -05 000000085 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:36:47.477 -05 000000085 INF: X Motor: Moved to 76.7344 after 666 ms 15-12-21 22:36:47.478 -05 000000085 INF: ====================================== 15-12-21 22:36:47.999 -05 000000080 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:36:47.999 -05 000000080 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:36:48.000 -05 000000080 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:36:48.113 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:48.153 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.642C:A1\r\n 15-12-21 22:36:48.153 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:48.241 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:48.241 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 5 of 25 seconds left=================== 15-12-21 22:36:48.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:48.280 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:48.280 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:48.440 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:48.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:48.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:48.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:48.665 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:48.665 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:49.242 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:49.242 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 4 of 25 seconds left=================== 15-12-21 22:36:49.693 -05 000000080 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:36:49.694 -05 000000080 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:36:49.694 -05 000000080 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:36:49.696 -05 000000080 INF: ====================================== 15-12-21 22:36:49.701 -05 000000029 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:36:49.709 -05 000000029 INF: ====================================== 15-12-21 22:36:49.957 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:49.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:49.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:50.080 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:50.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:50.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:50.213 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:50.243 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:50.244 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 3 of 25 seconds left=================== 15-12-21 22:36:50.292 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:50.292 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:50.397 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:50.416 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:36:50.416 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:50.480 -05 000000024 INF: Y Motor: Moved to 70.6885 after 3730 ms 15-12-21 22:36:50.481 -05 000000024 INF: ====================================== 15-12-21 22:36:50.483 -05 000000068 INF: ===================Move X,Y=================== 15-12-21 22:36:50.485 -05 000000068 INF: ====================================== 15-12-21 22:36:50.491 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:36:50.498 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:50.499 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:36:50.540 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:36:50.541 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:36:50.601 -05 000000082 INF: FPGA: Recv ZFREQCL 15-12-21 22:36:50.602 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:36:50.602 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:50.602 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:36:50.663 -05 000000085 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:36:50.664 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:36:50.664 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:50.666 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:50.677 -05 000000079 INF: ===================TDI FPGA Arm=================== 15-12-21 22:36:50.677 -05 000000028 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:36:50.677 -05 000000028 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:36:50.681 -05 000000079 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:50.685 -05 000000079 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:36:50.686 -05 000000079 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:36:50.725 -05 000000068 INF: FPGA: Recv TDIYPOS 15-12-21 22:36:50.725 -05 000000079 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:50.726 -05 000000028 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:36:50.727 -05 000000028 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:36:50.727 -05 000000028 INF: ====================================== 15-12-21 22:36:50.731 -05 000000079 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:36:50.734 -05 000000079 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:36:50.787 -05 000000055 INF: FPGA: Recv TDIYARM3 15-12-21 22:36:50.788 -05 000000079 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:36:50.793 -05 000000079 INF: ===================TDI FPGA Arm=================== 15-12-21 22:36:50.798 -05 000000079 INF: ====================================== 15-12-21 22:36:50.800 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:36:50.806 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:36:50.809 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:50.811 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:50.814 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:50.828 -05 000000078 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:36:50.828 -05 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:36:50.828 -05 000000078 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:36:50.828 -05 000000078 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:36:50.828 -05 000000078 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:36:50.828 -05 000000078 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:36:50.829 -05 000000090 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:36:50.837 -05 000000090 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:36:50.837 -05 000000090 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:36:50.839 -05 000000090 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:36:51.030 -05 000000081 INF: FPGA: Recv EX1MV 15-12-21 22:36:51.030 -05 000000090 INF: Excitation Filter 1: Moved -36 steps in 193.0387 ms 15-12-21 22:36:51.030 -05 000000090 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 201.2568 ms 15-12-21 22:36:51.030 -05 000000090 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 201.4354 ms 15-12-21 22:36:51.031 -05 000000090 INF: ====================================== 15-12-21 22:36:51.209 -05 000000056 INF: FPGA: Recv EX2MV 15-12-21 22:36:51.209 -05 000000078 INF: Excitation Filter 2: Moved -107 steps in 380.973 ms 15-12-21 22:36:51.209 -05 000000078 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 381.1077 ms 15-12-21 22:36:51.209 -05 000000078 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 381.2393 ms 15-12-21 22:36:51.211 -05 000000078 INF: ====================================== 15-12-21 22:36:51.213 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:51.223 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:36:51.242 -05 000000024 INF: ===================Move Y Motor without settling=================== 15-12-21 22:36:51.243 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:36:51.243 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:36:51.243 -05 000000090 INF: ===================FPGA Z Wait=================== 15-12-21 22:36:51.243 -05 000000024 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:36:51.243 -05 000000090 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:36:51.243 -05 000000024 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:36:51.245 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:51.245 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 2 of 25 seconds left=================== 15-12-21 22:36:51.246 -05 000000024 INF: Y Motor: Xmit 1G\n 15-12-21 22:36:51.248 -05 000000080 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:36:51.248 -05 000000049 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:36:51.248 -05 000000049 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:36:51.251 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:36:51.252 -05 000000085 INF: ===================Camera TDI=================== 15-12-21 22:36:51.284 -05 000000024 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:36:51.285 -05 000000024 INF: Y Motor: Recv 1G\r\n 15-12-21 22:36:51.286 -05 000000024 INF: Y Motor: Xmit 1D\n 15-12-21 22:36:51.342 -05 000000024 INF: Y Motor: Recv 1D\r\n 15-12-21 22:36:51.343 -05 000000024 INF: Y Motor: Recv *407662\r\n 15-12-21 22:36:51.344 -05 000000024 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:36:51.555 -05 000000081 INF: FPGA: Recv ZWAIT 15-12-21 22:36:51.557 -05 000000090 INF: ====================================== 15-12-21 22:36:51.677 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:51.706 -05 000000028 INF: ===================Frame #1=================== 15-12-21 22:36:51.706 -05 000000085 INF: ===================Frame #1=================== 15-12-21 22:36:51.758 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:51.758 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:51.857 -05 000000028 INF: ===================Frame #13=================== 15-12-21 22:36:51.857 -05 000000085 INF: ===================Frame #13=================== 15-12-21 22:36:51.858 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:51.882 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:51.882 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:51.902 -05 000000051 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2107=================== 15-12-21 22:36:51.986 -05 000000060 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2107, Registering and Extracting C040 L001 T2109=================== 15-12-21 22:36:52.007 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:52.008 -05 000000085 INF: ===================Frame #25=================== 15-12-21 22:36:52.008 -05 000000028 INF: ===================Frame #25=================== 15-12-21 22:36:52.075 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:52.075 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:52.160 -05 000000085 INF: ===================Frame #37=================== 15-12-21 22:36:52.160 -05 000000028 INF: ===================Frame #37=================== 15-12-21 22:36:52.209 -05 000000077 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2107=================== 15-12-21 22:36:52.211 -05 000000040 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106=================== 15-12-21 22:36:52.250 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:52.250 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 1 of 25 seconds left=================== 15-12-21 22:36:52.282 -05 000000089 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2110, Registering and Extracting C040 L001 T2111=================== 15-12-21 22:36:52.283 -05 000000075 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2110, Registering and Extracting C040 L001 T2111=================== 15-12-21 22:36:52.291 -05 000000038 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2110=================== 15-12-21 22:36:52.310 -05 000000085 INF: ===================Frame #49=================== 15-12-21 22:36:52.310 -05 000000028 INF: ===================Frame #49=================== 15-12-21 22:36:52.382 -05 000000071 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2110, Registering and Extracting C040 L001 T2112=================== 15-12-21 22:36:52.462 -05 000000085 INF: ===================Frame #61=================== 15-12-21 22:36:52.462 -05 000000028 INF: ===================Frame #61=================== 15-12-21 22:36:52.512 -05 000000048 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2110=================== 15-12-21 22:36:52.557 -05 000000027 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106=================== 15-12-21 22:36:52.567 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:52.603 -05 000000094 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2113, Registering and Extracting C040 L001 T2114=================== 15-12-21 22:36:52.603 -05 000000065 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2113, Registering and Extracting C040 L001 T2114=================== 15-12-21 22:36:52.613 -05 000000085 INF: ===================Frame #72=================== 15-12-21 22:36:52.613 -05 000000028 INF: ===================Frame #72=================== 15-12-21 22:36:52.632 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.980C:A1\r\n 15-12-21 22:36:52.632 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:52.798 -05 000000011 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2113=================== 15-12-21 22:36:52.804 -05 000000009 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2113, Registering and Extracting C040 L001 T2115=================== 15-12-21 22:36:52.887 -05 000000066 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2113=================== 15-12-21 22:36:52.904 -05 000000074 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2113, Registering and Extracting C040 L001 T2116=================== 15-12-21 22:36:53.164 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:53.164 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:53.164 -05 000000057 INF: WaitCommand(25000) end 15-12-21 22:36:53.164 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:53.166 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:36:53.197 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:53.308 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:53.309 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 22:36:53.309 -05 000000057 INF: Valve A2: Go to position 5 15-12-21 22:36:53.309 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:36:53.362 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 1\r 15-12-21 22:36:53.362 -05 000000057 INF: Valve A2: 41.872 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:36:53.362 -05 000000057 INF: Valve A2: Taking shortest path 'CW' from 1 to 5 15-12-21 22:36:53.362 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CW5\r 15-12-21 22:36:53.363 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:36:53.363 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:36:53.496 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.136C:A1\r\n 15-12-21 22:36:53.496 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:53.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:53.867 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:53.867 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:54.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:54.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:54.106 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:54.115 -05 000000085 INF: ===================Frame #191=================== 15-12-21 22:36:54.117 -05 000000028 INF: ===================Frame #191=================== 15-12-21 22:36:54.252 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:54.265 -05 000000085 INF: ===================Frame #203=================== 15-12-21 22:36:54.267 -05 000000028 INF: ===================Frame #203=================== 15-12-21 22:36:54.284 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 22:36:54.285 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:54.285 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:54.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:54.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:36:54.417 -05 000000085 INF: ===================Frame #215=================== 15-12-21 22:36:54.417 -05 000000028 INF: ===================Frame #215=================== 15-12-21 22:36:54.443 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:54.499 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:36:54.499 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:54.568 -05 000000085 INF: ===================Frame #227=================== 15-12-21 22:36:54.568 -05 000000028 INF: ===================Frame #227=================== 15-12-21 22:36:54.613 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:36:54.675 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:54.675 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:54.718 -05 000000085 INF: ===================Frame #239=================== 15-12-21 22:36:54.719 -05 000000028 INF: ===================Frame #239=================== 15-12-21 22:36:54.824 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:54.895 -05 000000028 INF: ===================Frame #253=================== 15-12-21 22:36:54.895 -05 000000085 INF: ===================Frame #253=================== 15-12-21 22:36:54.896 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:36:54.896 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:55.005 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:55.005 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:36:55.005 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:55.045 -05 000000028 INF: ===================Frame #265=================== 15-12-21 22:36:55.045 -05 000000085 INF: ===================Frame #265=================== 15-12-21 22:36:55.080 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:55.091 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:36:55.181 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:36:55.198 -05 000000028 INF: ===================Frame #277=================== 15-12-21 22:36:55.198 -05 000000085 INF: ===================Frame #277=================== 15-12-21 22:36:55.267 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 22:36:55.267 -05 000000057 INF: Current Position of Pump is: 21120 15-12-21 22:36:55.268 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:36:55.348 -05 000000085 INF: ===================Frame #289=================== 15-12-21 22:36:55.349 -05 000000028 INF: ===================Frame #289=================== 15-12-21 22:36:55.367 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V3200s231P4608R\r 15-12-21 22:36:55.453 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:55.499 -05 000000085 INF: ===================Frame #301=================== 15-12-21 22:36:55.500 -05 000000028 INF: ===================Frame #301=================== 15-12-21 22:36:55.553 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:55.554 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:36:55.579 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:55.580 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:36:55.580 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:55.654 -05 000000085 INF: ===================Frame #313=================== 15-12-21 22:36:55.654 -05 000000028 INF: ===================Frame #313=================== 15-12-21 22:36:55.681 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:55.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:55.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:55.804 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:55.805 -05 000000085 INF: ===================Frame #325=================== 15-12-21 22:36:55.805 -05 000000028 INF: ===================Frame #325=================== 15-12-21 22:36:55.829 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:55.830 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:55.830 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:55.895 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:55.935 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:55.952 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:55.952 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:55.955 -05 000000028 INF: ===================Frame #337=================== 15-12-21 22:36:55.955 -05 000000085 INF: ===================Frame #337=================== 15-12-21 22:36:56.107 -05 000000085 INF: ===================Frame #349=================== 15-12-21 22:36:56.107 -05 000000028 INF: ===================Frame #349=================== 15-12-21 22:36:56.145 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:56.201 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:56.259 -05 000000028 INF: ===================Frame #361=================== 15-12-21 22:36:56.259 -05 000000085 INF: ===================Frame #361=================== 15-12-21 22:36:56.410 -05 000000085 INF: ===================Frame #373=================== 15-12-21 22:36:56.410 -05 000000028 INF: ===================Frame #373=================== 15-12-21 22:36:56.451 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:56.471 -05 000000060 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106, Registering and Extracting C040 L001 T2113=================== 15-12-21 22:36:56.515 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:56.563 -05 000000028 INF: ===================Frame #385=================== 15-12-21 22:36:56.563 -05 000000085 INF: ===================Frame #385=================== 15-12-21 22:36:56.714 -05 000000028 INF: ===================Frame #397=================== 15-12-21 22:36:56.714 -05 000000085 INF: ===================Frame #397=================== 15-12-21 22:36:56.765 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:56.827 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:56.867 -05 000000028 INF: ===================Frame #409=================== 15-12-21 22:36:56.867 -05 000000085 INF: ===================Frame #409=================== 15-12-21 22:36:57.020 -05 000000028 INF: ===================Frame #421=================== 15-12-21 22:36:57.020 -05 000000085 INF: ===================Frame #421=================== 15-12-21 22:36:57.077 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:57.138 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:57.171 -05 000000028 INF: ===================Frame #433=================== 15-12-21 22:36:57.171 -05 000000085 INF: ===================Frame #433=================== 15-12-21 22:36:57.172 -05 000000075 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105, Registering and Extracting C040 L001 T2106=================== 15-12-21 22:36:57.247 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:57.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:57.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:57.322 -05 000000085 INF: ===================Frame #445=================== 15-12-21 22:36:57.322 -05 000000028 INF: ===================Frame #445=================== 15-12-21 22:36:57.363 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:57.388 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:57.389 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:57.389 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:57.450 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:57.450 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:36:57.472 -05 000000028 INF: ===================Frame #457=================== 15-12-21 22:36:57.472 -05 000000085 INF: ===================Frame #457=================== 15-12-21 22:36:57.497 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:57.513 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:57.513 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:57.550 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:36:57.622 -05 000000028 INF: ===================Frame #469=================== 15-12-21 22:36:57.622 -05 000000085 INF: ===================Frame #469=================== 15-12-21 22:36:57.637 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 22:36:57.637 -05 000000057 INF: Current Position of Pump is: 25728 15-12-21 22:36:57.637 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:36:57.737 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:36:57.772 -05 000000028 INF: ===================Frame #480=================== 15-12-21 22:36:57.773 -05 000000085 INF: ===================Frame #480=================== 15-12-21 22:36:57.778 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:36:57.823 -05 000000071 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104, Registering and Extracting C040 L001 T2105=================== 15-12-21 22:36:57.825 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:57.828 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.010C:A1\r\n 15-12-21 22:36:57.828 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:57.875 -05 000000089 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103, Registering and Extracting C040 L001 T2104=================== 15-12-21 22:36:57.927 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:58.013 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:36:58.023 -05 000000065 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102, Registering and Extracting C040 L001 T2103=================== 15-12-21 22:36:58.263 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:36:58.323 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:36:58.324 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:58.325 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:36:58.325 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:36:58.386 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:36:58.386 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:58.491 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:36:58.513 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:36:58.513 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:58.714 -05 000000028 INF: ===================Frame #555=================== 15-12-21 22:36:58.731 -05 000000085 INF: ===================Frame #556=================== 15-12-21 22:36:58.744 -05 000000094 INF: ===================Registering and Extracting C040 L001 T2101, Registering and Extracting C040 L001 T2102=================== 15-12-21 22:36:58.747 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:58.747 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:58.755 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:58.758 -05 000000057 INF: WaitCommand(5000) start 15-12-21 22:36:58.758 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 22:36:58.864 -05 000000028 INF: ===================Frame #567=================== 15-12-21 22:36:58.874 -05 000000009 INF: ===================Registering and Extracting C040 L001 T2101=================== 15-12-21 22:36:58.888 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:36:58.984 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.859C:A1\r\n 15-12-21 22:36:58.984 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:58.989 -05 000000074 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:36:59.055 -05 000000028 INF: ===================Frame #579=================== 15-12-21 22:36:59.115 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:36:59.170 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:59.172 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:36:59.172 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:59.181 -05 000000085 INF: ===================Frame #592=================== 15-12-21 22:36:59.192 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:36:59.205 -05 000000028 INF: ===================Frame #594=================== 15-12-21 22:36:59.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:36:59.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:59.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:59.360 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:59.375 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:36:59.403 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:36:59.414 -05 000000085 INF: ===================Frame #610=================== 15-12-21 22:36:59.415 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:36:59.415 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:36:59.492 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:59.499 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:36:59.572 -05 000000028 INF: ===================Frame #623=================== 15-12-21 22:36:59.603 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:59.605 -05 000000085 INF: ===================Frame #625=================== 15-12-21 22:36:59.610 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:36:59.722 -05 000000028 INF: ===================Frame #635=================== 15-12-21 22:36:59.730 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:36:59.755 -05 000000085 INF: ===================Frame #637=================== 15-12-21 22:36:59.759 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:36:59.759 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:36:59.873 -05 000000028 INF: ===================Frame #647=================== 15-12-21 22:36:59.905 -05 000000085 INF: ===================Frame #649=================== 15-12-21 22:37:00.024 -05 000000028 INF: ===================Frame #658=================== 15-12-21 22:37:00.057 -05 000000085 INF: ===================Frame #661=================== 15-12-21 22:37:00.207 -05 000000085 INF: ===================Frame #673=================== 15-12-21 22:37:00.349 -05 000000028 INF: ===================Frame #684=================== 15-12-21 22:37:00.358 -05 000000085 INF: ===================Frame #685=================== 15-12-21 22:37:00.508 -05 000000085 INF: ===================Frame #697=================== 15-12-21 22:37:00.566 -05 000000028 INF: ===================Frame #701=================== 15-12-21 22:37:00.643 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:00.659 -05 000000085 INF: ===================Frame #709=================== 15-12-21 22:37:00.665 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:00.665 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:00.716 -05 000000028 INF: ===================Frame #713=================== 15-12-21 22:37:00.759 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:00.759 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 22:37:00.767 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:00.810 -05 000000085 INF: ===================Frame #721=================== 15-12-21 22:37:00.851 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 22:37:00.851 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:00.866 -05 000000028 INF: ===================Frame #725=================== 15-12-21 22:37:00.957 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:00.961 -05 000000085 INF: ===================Frame #733=================== 15-12-21 22:37:00.977 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:00.977 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:01.017 -05 000000028 INF: ===================Frame #737=================== 15-12-21 22:37:01.017 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:37:01.080 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:01.100 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:01.100 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:01.112 -05 000000085 INF: ===================Frame #744=================== 15-12-21 22:37:01.168 -05 000000028 INF: ===================Frame #749=================== 15-12-21 22:37:01.318 -05 000000028 INF: ===================Frame #761=================== 15-12-21 22:37:01.437 -05 000000085 INF: ===================Frame #770=================== 15-12-21 22:37:01.469 -05 000000028 INF: ===================Frame #773=================== 15-12-21 22:37:01.620 -05 000000028 INF: ===================Frame #785=================== 15-12-21 22:37:01.620 -05 000000085 INF: ===================Frame #785=================== 15-12-21 22:37:01.759 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:01.759 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 22:37:01.770 -05 000000028 INF: ===================Frame #797=================== 15-12-21 22:37:01.770 -05 000000085 INF: ===================Frame #797=================== 15-12-21 22:37:01.921 -05 000000028 INF: ===================Frame #808=================== 15-12-21 22:37:01.921 -05 000000085 INF: ===================Frame #808=================== 15-12-21 22:37:02.172 -05 000000085 INF: ===================Frame #828=================== 15-12-21 22:37:02.270 -05 000000028 INF: ===================Frame #836=================== 15-12-21 22:37:02.332 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:02.343 -05 000000085 INF: ===================Frame #842=================== 15-12-21 22:37:02.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:02.350 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:02.450 -05 000000028 INF: ===================Frame #850=================== 15-12-21 22:37:02.456 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:02.474 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:02.474 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:02.510 -05 000000085 INF: ===================Frame #855=================== 15-12-21 22:37:02.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:02.600 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:02.600 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:02.619 -05 000000028 INF: ===================Frame #864=================== 15-12-21 22:37:02.660 -05 000000085 INF: ===================Frame #867=================== 15-12-21 22:37:02.760 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:02.760 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 22:37:02.785 -05 000000028 INF: ===================Frame #877=================== 15-12-21 22:37:02.810 -05 000000085 INF: ===================Frame #879=================== 15-12-21 22:37:02.932 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:02.935 -05 000000028 INF: ===================Frame #889=================== 15-12-21 22:37:02.960 -05 000000085 INF: ===================Frame #891=================== 15-12-21 22:37:02.974 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.993C:A1\r\n 15-12-21 22:37:02.974 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:03.089 -05 000000028 INF: ===================Frame #901=================== 15-12-21 22:37:03.110 -05 000000085 INF: ===================Frame #902=================== 15-12-21 22:37:03.240 -05 000000028 INF: ===================Frame #913=================== 15-12-21 22:37:03.340 -05 000000085 INF: ===================Frame #921=================== 15-12-21 22:37:03.390 -05 000000028 INF: ===================Frame #925=================== 15-12-21 22:37:03.490 -05 000000085 INF: ===================Frame #933=================== 15-12-21 22:37:03.540 -05 000000028 INF: ===================Frame #936=================== 15-12-21 22:37:03.641 -05 000000085 INF: ===================Frame #944=================== 15-12-21 22:37:03.761 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:03.761 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:03.761 -05 000000057 INF: WaitCommand(5000) end 15-12-21 22:37:03.766 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:03.771 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:03.773 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:03.774 -05 000000078 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:37:03.776 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:03.777 -05 000000095 INF: ===================WaitCommand=================== 15-12-21 22:37:03.777 -05 000000095 INF: WaitCommand(15000) start 15-12-21 22:37:03.778 -05 000000095 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:37:03.800 -05 000000028 INF: ===================Frame #957=================== 15-12-21 22:37:03.838 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:03.840 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:03.845 -05 000000085 INF: ===================Frame #960=================== 15-12-21 22:37:03.847 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:03.847 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:03.950 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:03.955 -05 000000028 INF: ===================Frame #969=================== 15-12-21 22:37:04.016 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:04.016 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:04.023 -05 000000085 INF: ===================Frame #975=================== 15-12-21 22:37:04.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:04.081 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:04.105 -05 000000028 INF: ===================Frame #981=================== 15-12-21 22:37:04.118 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:37:04.177 -05 000000085 INF: ===================Frame #987=================== 15-12-21 22:37:04.185 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:04.204 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 22:37:04.204 -05 000000078 INF: Current Position of Pump is: 25728 15-12-21 22:37:04.204 -05 000000078 INF: Dispense Steps 48000 is greater than steps to home syringe 25728, reducing number of steps to 25728 15-12-21 22:37:04.204 -05 000000078 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:37:04.205 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.770C:A1\r\n 15-12-21 22:37:04.205 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:04.256 -05 000000028 INF: ===================Frame #993=================== 15-12-21 22:37:04.304 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD25728R\r 15-12-21 22:37:04.309 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:04.327 -05 000000085 INF: ===================Frame #999=================== 15-12-21 22:37:04.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:04.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:04.391 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:04.406 -05 000000028 INF: ===================Frame #1005=================== 15-12-21 22:37:04.477 -05 000000085 INF: ===================Frame #1010=================== 15-12-21 22:37:04.491 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:04.557 -05 000000028 INF: ===================Frame #1017=================== 15-12-21 22:37:04.579 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:04.706 -05 000000085 INF: ===================Frame #1029=================== 15-12-21 22:37:04.707 -05 000000028 INF: ===================Frame #1029=================== 15-12-21 22:37:04.778 -05 000000095 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:37:04.829 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:04.857 -05 000000028 INF: ===================Frame #1041=================== 15-12-21 22:37:04.857 -05 000000085 INF: ===================Frame #1041=================== 15-12-21 22:37:04.892 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:05.007 -05 000000028 INF: ===================Frame #1052=================== 15-12-21 22:37:05.007 -05 000000085 INF: ===================Frame #1052=================== 15-12-21 22:37:05.142 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:05.203 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:05.255 -05 000000085 INF: ===================Frame #1072=================== 15-12-21 22:37:05.334 -05 000000028 INF: ===================Frame #1078=================== 15-12-21 22:37:05.430 -05 000000085 INF: ===================Frame #1086=================== 15-12-21 22:37:05.453 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:05.517 -05 000000028 INF: ===================Frame #1092=================== 15-12-21 22:37:05.518 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:05.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:05.577 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:05.577 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:05.601 -05 000000085 INF: ===================Frame #1099=================== 15-12-21 22:37:05.676 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:05.684 -05 000000028 INF: ===================Frame #1106=================== 15-12-21 22:37:05.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:05.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:05.751 -05 000000085 INF: ===================Frame #1111=================== 15-12-21 22:37:05.768 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:05.778 -05 000000095 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:37:05.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:05.826 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:05.849 -05 000000028 INF: ===================Frame #1119=================== 15-12-21 22:37:05.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:05.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:05.901 -05 000000085 INF: ===================Frame #1123=================== 15-12-21 22:37:05.999 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:05.999 -05 000000028 INF: ===================Frame #1131=================== 15-12-21 22:37:06.014 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:37:06.014 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:06.051 -05 000000085 INF: ===================Frame #1135=================== 15-12-21 22:37:06.076 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:06.140 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:06.149 -05 000000028 INF: ===================Frame #1143=================== 15-12-21 22:37:06.201 -05 000000085 INF: ===================Frame #1147=================== 15-12-21 22:37:06.299 -05 000000028 INF: ===================Frame #1155=================== 15-12-21 22:37:06.351 -05 000000085 INF: ===================Frame #1159=================== 15-12-21 22:37:06.390 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:06.449 -05 000000028 INF: ===================Frame #1166=================== 15-12-21 22:37:06.451 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:06.501 -05 000000085 INF: ===================Frame #1171=================== 15-12-21 22:37:06.652 -05 000000085 INF: ===================Frame #1182=================== 15-12-21 22:37:06.664 -05 000000028 INF: ===================Frame #1183=================== 15-12-21 22:37:06.701 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:06.764 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:06.778 -05 000000095 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:37:06.814 -05 000000028 INF: ===================Frame #1195=================== 15-12-21 22:37:06.902 -05 000000085 INF: ===================Frame #1202=================== 15-12-21 22:37:06.964 -05 000000028 INF: ===================Frame #1207=================== 15-12-21 22:37:07.014 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:07.071 -05 000000085 INF: ===================Frame #1216=================== 15-12-21 22:37:07.075 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:07.114 -05 000000028 INF: ===================Frame #1219=================== 15-12-21 22:37:07.115 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:07.137 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:07.137 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:07.237 -05 000000085 INF: ===================Frame #1229=================== 15-12-21 22:37:07.239 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:07.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:07.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:07.264 -05 000000028 INF: ===================Frame #1231=================== 15-12-21 22:37:07.325 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:07.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:07.386 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:07.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:07.387 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:07.387 -05 000000085 INF: ===================Frame #1241=================== 15-12-21 22:37:07.414 -05 000000028 INF: ===================Frame #1243=================== 15-12-21 22:37:07.537 -05 000000085 INF: ===================Frame #1250=================== 15-12-21 22:37:07.557 -05 000000079 INF: FPGA: Recv TDIYWAIT 15-12-21 22:37:07.558 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:37:07.564 -05 000000049 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:37:07.564 -05 000000028 INF: ===================Frame #1250=================== 15-12-21 22:37:07.567 -05 000000056 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:37:07.567 -05 000000063 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:37:07.568 -05 000000056 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:37:07.568 -05 000000056 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:37:07.568 -05 000000056 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:37:07.573 -05 000000056 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:37:07.573 -05 000000063 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:37:07.573 -05 000000063 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:37:07.573 -05 000000063 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:37:07.575 -05 000000063 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:37:07.606 -05 000000085 INF: Camera complete - got 1250 frames. 15-12-21 22:37:07.608 -05 000000085 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:37:07.636 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:07.721 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:07.743 -05 000000079 INF: FPGA: Recv EX1MV 15-12-21 22:37:07.743 -05 000000063 INF: Excitation Filter 1: Moved 36 steps in 169.6376 ms 15-12-21 22:37:07.743 -05 000000063 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 169.7595 ms 15-12-21 22:37:07.743 -05 000000063 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 175.3308 ms 15-12-21 22:37:07.744 -05 000000063 INF: ====================================== 15-12-21 22:37:07.778 -05 000000095 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:37:07.846 -05 000000028 INF: Camera complete - got 1250 frames. 15-12-21 22:37:07.847 -05 000000028 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:37:07.872 -05 000000085 INF: ===================Camera TDI=================== 15-12-21 22:37:07.906 -05 000000085 INF: ====================================== 15-12-21 22:37:07.971 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:07.994 -05 000000029 INF: FPGA: Recv EX2MV 15-12-21 22:37:07.994 -05 000000056 INF: Excitation Filter 2: Moved 107 steps in 426.2349 ms 15-12-21 22:37:07.994 -05 000000056 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 426.328 ms 15-12-21 22:37:07.994 -05 000000056 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 426.3989 ms 15-12-21 22:37:07.995 -05 000000056 INF: ====================================== 15-12-21 22:37:07.997 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:37:08.000 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:37:08.000 -05 000000049 INF: ====================================== 15-12-21 22:37:08.023 -05 000000028 INF: ====================================== 15-12-21 22:37:08.025 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:37:08.026 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:08.026 -05 000000078 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:37:08.026 -05 000000078 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:37:08.026 -05 000000080 INF: ====================================== 15-12-21 22:37:08.079 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:08.093 -05 000000024 INF: Y Motor: Moved to 9.0764 after 16749 ms 15-12-21 22:37:08.094 -05 000000024 INF: ====================================== 15-12-21 22:37:08.095 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:08.097 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:08.101 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.101 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:37:08.118 -05 000000049 INF: FPGA: Recv TDICLINES 9487 15-12-21 22:37:08.118 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:37:08.126 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:37:08.150 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.984C:A1\r\n 15-12-21 22:37:08.150 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:08.189 -05 000000023 INF: FPGA: Recv TDIYERD 907645 15-12-21 22:37:08.189 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:37:08.214 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:08.256 -05 000000085 INF: FPGA: Recv ZADCR 25300 15-12-21 22:37:08.256 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.096. Y moved -60.304 mm 15-12-21 22:37:08.256 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:37:08.306 -05 000000079 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:37:08.306 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:37:08.306 -05 000000062 INF: TDIScan finished after 21761.3607 ms 15-12-21 22:37:08.306 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:37:08.306 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:37:08.311 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.314 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:08.337 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.009 um 15-12-21 22:37:08.337 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.340 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.346 -05 000000090 INF: ===================Dither Clean Up Command=================== 15-12-21 22:37:08.346 -05 000000063 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:37:08.346 -05 000000049 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:37:08.346 -05 000000063 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:37:08.346 -05 000000024 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:37:08.350 -05 000000024 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:37:08.350 -05 000000024 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:37:08.361 -05 000000085 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:37:08.361 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:08.365 -05 000000085 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:37:08.367 -05 000000079 INF: FPGA: Recv ZSTEP 15-12-21 22:37:08.367 -05 000000079 INF: FPGA: Recv ZSEL 15-12-21 22:37:08.372 -05 000000085 INF: FPGA: Xmit ZDACW 32043\n 15-12-21 22:37:08.372 -05 000000080 INF: ===================LFT:Extracting coords=================== 15-12-21 22:37:08.374 -05 000000024 INF: ====================================== 15-12-21 22:37:08.403 -05 000000063 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:37:08.403 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:08.404 -05 000000063 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:37:08.404 -05 000000049 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:37:08.404 -05 000000063 INF: ====================================== 15-12-21 22:37:08.405 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:08.408 -05 000000080 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:37:08.414 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:08.414 -05 000000081 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:08.414 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:08.414 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:08.422 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:08.422 -05 000000081 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:08.422 -05 000000024 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:08.424 -05 000000029 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:08.430 -05 000000063 INF: FPGA: Recv ZDACW 15-12-21 22:37:08.430 -05 000000085 INF: ====================================== 15-12-21 22:37:08.462 -05 000000049 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:37:08.463 -05 000000049 INF: ====================================== 15-12-21 22:37:08.592 -05 000000056 INF: LFT found best fwhm score 2.322521 in 128 ms 15-12-21 22:37:08.592 -05 000000056 INF: LFT found good score at index 7805 with fwhm value 2.322521. Next cycle, cycle 41 starting Z position for bottom surface is at -0.101 mm FC:B, C:40,L:1,B 15-12-21 22:37:08.592 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:08.592 -05 000000056 INF: ====================================== 15-12-21 22:37:08.593 -05 000000081 INF: LFT found best fwhm score 2.508645 in 125 ms 15-12-21 22:37:08.593 -05 000000081 INF: LFT found good score at index 7417 with fwhm value 2.508645. Next cycle, cycle 41 starting Z position for bottom surface is at -0.101 mm FC:B, C:40,L:1,B 15-12-21 22:37:08.593 -05 000000081 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:08.593 -05 000000081 INF: ====================================== 15-12-21 22:37:08.631 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:08.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:08.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:08.653 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:08.657 -05 000000024 INF: LFT found best fwhm score 2.419122 in 193 ms 15-12-21 22:37:08.657 -05 000000024 INF: LFT found good score at index 4465 with fwhm value 2.419122. Next cycle, cycle 41 starting Z position for bottom surface is at -0.102 mm FC:B, C:40,L:1,B 15-12-21 22:37:08.657 -05 000000029 INF: LFT found best fwhm score 2.536624 in 191 ms 15-12-21 22:37:08.657 -05 000000029 INF: LFT found good score at index 8997 with fwhm value 2.536624. Next cycle, cycle 41 starting Z position for bottom surface is at -0.101 mm FC:B, C:40,L:1,B 15-12-21 22:37:08.658 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:08.658 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:08.658 -05 000000029 INF: ====================================== 15-12-21 22:37:08.658 -05 000000024 INF: ====================================== 15-12-21 22:37:08.662 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:08.665 -05 000000080 INF: LFT weighted average best Z for bottom surface is at -0.101mm FC:B, C:40,L:1,B 15-12-21 22:37:08.665 -05 000000080 INF: ====================================== 15-12-21 22:37:08.668 -05 000000090 INF: ====================================== 15-12-21 22:37:08.672 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.675 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:37:08.677 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.677 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:37:08.678 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.678 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:37:08.678 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.678 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:37:08.678 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.679 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:37:08.679 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:37:08.681 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Waiting for image analysis, Delay 11 of 15 seconds left=================== 15-12-21 22:37:08.681 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 11 of 15 seconds left=================== 15-12-21 22:37:08.681 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:37:08.681 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 76.73401 Y = 39.38=================== 15-12-21 22:37:08.681 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:37:08.682 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:37:08.684 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:08.684 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:37:08.684 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:37:08.686 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:37:08.687 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface=================== 15-12-21 22:37:08.709 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:08.710 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:08.713 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:08.713 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:08.713 -05 000000078 INF: ====================================== 15-12-21 22:37:08.723 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:08.725 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:08.725 -05 000000062 INF: Compensator: Remaining OutOfPath 15-12-21 22:37:08.725 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:08.729 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:08.903 -05 000000095 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:37:08.909 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:37:08.910 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:37:08.949 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:08.955 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.956 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:37:08.956 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:08.956 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -122.2 um, section = B_1 15-12-21 22:37:08.961 -05 000000074 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202=================== 15-12-21 22:37:08.961 -05 000000009 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202=================== 15-12-21 22:37:08.962 -05 000000065 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203=================== 15-12-21 22:37:08.962 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:37:08.962 -05 000000094 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204=================== 15-12-21 22:37:08.962 -05 000000071 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205=================== 15-12-21 22:37:08.963 -05 000000075 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206=================== 15-12-21 22:37:08.963 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:37:08.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:08.964 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:08.964 -05 000000056 INF: ===================MoveEmissionFilters=================== 15-12-21 22:37:08.967 -05 000000089 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207=================== 15-12-21 22:37:08.967 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:37:08.967 -05 000000079 INF: ===================Move X,Y=================== 15-12-21 22:37:08.967 -05 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:37:08.967 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:37:08.968 -05 000000024 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:37:08.968 -05 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:37:08.968 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:37:08.969 -05 000000079 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:37:08.969 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:37:08.969 -05 000000024 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:37:08.970 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:37:08.970 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:37:08.970 -05 000000080 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:37:08.970 -05 000000085 INF: ===================Move Y Motor without settling=================== 15-12-21 22:37:08.970 -05 000000029 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:37:08.970 -05 000000078 INF: ===================Move X Motor without settling=================== 15-12-21 22:37:08.971 -05 000000078 INF: X Motor: Xmit PR VM\n 15-12-21 22:37:08.971 -05 000000023 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:37:08.971 -05 000000028 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:37:08.971 -05 000000090 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:37:08.971 -05 000000085 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:37:08.971 -05 000000023 INF: Z Motor: Moving to -0.1186 mm, started at -0.1222 mm 15-12-21 22:37:08.971 -05 000000023 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:37:08.971 -05 000000085 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:37:08.972 -05 000000060 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207, Registering and Extracting C040 L001 T2208=================== 15-12-21 22:37:08.972 -05 000000090 INF: ====================================== 15-12-21 22:37:08.972 -05 000000028 INF: ====================================== 15-12-21 22:37:08.973 -05 000000080 INF: ====================================== 15-12-21 22:37:08.973 -05 000000029 INF: ====================================== 15-12-21 22:37:08.991 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:37:08.997 -05 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:37:08.997 -05 000000080 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:37:08.997 -05 000000028 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:37:08.997 -05 000000055 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:37:08.997 -05 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:37:08.997 -05 000000080 INF: ====================================== 15-12-21 22:37:08.997 -05 000000028 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:37:08.997 -05 000000049 INF: ====================================== 15-12-21 22:37:08.998 -05 000000028 INF: ====================================== 15-12-21 22:37:09.002 -05 000000081 INF: ====================================== 15-12-21 22:37:09.002 -05 000000055 INF: ====================================== 15-12-21 22:37:09.003 -05 000000024 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:37:09.004 -05 000000090 INF: ====================================== 15-12-21 22:37:09.005 -05 000000024 INF: ====================================== 15-12-21 22:37:09.005 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:37:09.006 -05 000000063 INF: ====================================== 15-12-21 22:37:09.018 -05 000000085 INF: Y Motor: Xmit 1G\n 15-12-21 22:37:09.020 -05 000000056 INF: ====================================== 15-12-21 22:37:09.026 -05 000000080 INF: FPGA: Recv ZTRG 15-12-21 22:37:09.026 -05 000000023 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:37:09.086 -05 000000049 INF: FPGA: Recv ZYT 15-12-21 22:37:09.086 -05 000000023 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:37:09.086 -05 000000023 INF: FPGA: Xmit ZMV 31083\n 15-12-21 22:37:09.089 -05 000000085 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:37:09.092 -05 000000078 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:37:09.092 -05 000000078 INF: X Motor: Xmit PR VI\n 15-12-21 22:37:09.094 -05 000000085 INF: Y Motor: Recv 1G\r\n 15-12-21 22:37:09.097 -05 000000085 INF: Y Motor: Xmit 1D\n 15-12-21 22:37:09.147 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:09.157 -05 000000081 INF: FPGA: Recv ZMV 15-12-21 22:37:09.157 -05 000000023 INF: Z Motor: MoveAndTrigger 'ZMV' command took 70.9271 ms 15-12-21 22:37:09.157 -05 000000023 INF: FPGA: Xmit ZDACR\n 15-12-21 22:37:09.160 -05 000000078 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:37:09.160 -05 000000078 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:37:09.160 -05 000000078 INF: X Motor: Moving to 80.2570 mm @15.000 mm/sec, started at 76.7344 mm 15-12-21 22:37:09.160 -05 000000085 INF: Y Motor: Recv 1D\r\n 15-12-21 22:37:09.160 -05 000000078 INF: X Motor: Xmit MA 8707\n 15-12-21 22:37:09.161 -05 000000085 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:37:09.164 -05 000000085 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:37:09.212 -05 000000080 INF: FPGA: Recv ZDACR 31083 15-12-21 22:37:09.217 -05 000000023 INF: Z Motor: MoveAndTrigger took 245.9749 ms w/comms 15-12-21 22:37:09.217 -05 000000023 INF: Z Motor: After move to -0.1186, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:37:09.217 -05 000000023 INF: Z Motor: MoveAbsStepped took 246.1067 ms 15-12-21 22:37:09.218 -05 000000078 INF: X Motor: Recv MA 8707\r\n> 15-12-21 22:37:09.218 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:37:09.218 -05 000000078 INF: X Motor: WaitUntilStopped 60235 15-12-21 22:37:09.219 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:09.219 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:09.220 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:37:09.228 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:37:09.228 -05 000000080 INF: ===================Camera Arm TDI=================== 15-12-21 22:37:09.231 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:09.235 -05 000000063 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:37:09.238 -05 000000063 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:37:09.238 -05 000000063 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:37:09.298 -05 000000049 INF: FPGA: Recv ZSEL 15-12-21 22:37:09.298 -05 000000063 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:37:09.299 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:09.302 -05 000000063 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:37:09.316 -05 000000063 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:37:09.316 -05 000000063 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:37:09.356 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:09.356 -05 000000056 INF: FPGA: Recv ZSTEP 15-12-21 22:37:09.357 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:09.363 -05 000000063 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:37:09.364 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:09.374 -05 000000063 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:37:09.374 -05 000000063 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:37:09.374 -05 000000063 INF: Z Motor: Arming to move to -0.0786 mm 15-12-21 22:37:09.374 -05 000000063 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:37:09.413 -05 000000029 INF: FPGA: Recv ZYT 15-12-21 22:37:09.413 -05 000000063 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907643 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:37:09.413 -05 000000063 INF: FPGA: Xmit ZARM 20597\n 15-12-21 22:37:09.415 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.927C:A1\r\n 15-12-21 22:37:09.415 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:09.476 -05 000000056 INF: FPGA: Recv ZARM 15-12-21 22:37:09.476 -05 000000063 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 63.0896 ms 15-12-21 22:37:09.476 -05 000000063 INF: Z Motor: ArmAbsStepped took 102.1473 ms 15-12-21 22:37:09.477 -05 000000063 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:09.480 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:37:09.485 -05 000000063 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:37:09.496 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:37:09.504 -05 000000063 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:37:09.506 -05 000000063 INF: ===================TDI Scan Setup=================== 15-12-21 22:37:09.508 -05 000000063 INF: ====================================== 15-12-21 22:37:09.903 -05 000000095 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:37:09.999 -05 000000078 INF: X Motor: Xmit PR ER\n 15-12-21 22:37:10.055 -05 000000078 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:37:10.055 -05 000000078 INF: X Motor: Moved to 80.2573 after 837 ms 15-12-21 22:37:10.056 -05 000000078 INF: ====================================== 15-12-21 22:37:10.568 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:10.628 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:10.628 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:10.761 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:10.821 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:10.821 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:10.823 -05 000000080 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:37:10.823 -05 000000080 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:37:10.823 -05 000000080 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:37:10.904 -05 000000095 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:37:10.943 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:11.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:11.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:11.120 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:11.194 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:37:11.194 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:11.905 -05 000000095 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:37:12.269 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:12.278 -05 000000080 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:37:12.282 -05 000000080 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:37:12.282 -05 000000080 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:37:12.283 -05 000000080 INF: ====================================== 15-12-21 22:37:12.289 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:12.289 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:12.293 -05 000000023 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:37:12.295 -05 000000023 INF: ====================================== 15-12-21 22:37:12.391 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:12.416 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:12.416 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:12.519 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:12.534 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:12.534 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:12.786 -05 000000085 INF: Y Motor: Moved to 70.6886 after 3623 ms 15-12-21 22:37:12.787 -05 000000085 INF: ====================================== 15-12-21 22:37:12.789 -05 000000079 INF: ===================Move X,Y=================== 15-12-21 22:37:12.791 -05 000000079 INF: ====================================== 15-12-21 22:37:12.796 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:37:12.807 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:12.808 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:37:12.846 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:37:12.847 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:37:12.905 -05 000000095 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:37:12.907 -05 000000085 INF: FPGA: Recv ZFREQCL 15-12-21 22:37:12.908 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:37:12.908 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:12.908 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:37:12.969 -05 000000049 INF: FPGA: Recv TDIYERD 7068852 15-12-21 22:37:12.970 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068852 counts (70.689 mm) 15-12-21 22:37:12.971 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:37:12.972 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:37:12.978 -05 000000085 INF: ===================TDI FPGA Arm=================== 15-12-21 22:37:12.978 -05 000000029 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:37:12.981 -05 000000029 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:37:12.982 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:37:12.986 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:37:12.996 -05 000000085 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:37:13.038 -05 000000079 INF: FPGA: Recv TDIYPOS 15-12-21 22:37:13.045 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:37:13.048 -05 000000029 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:37:13.049 -05 000000029 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:37:13.049 -05 000000029 INF: ====================================== 15-12-21 22:37:13.051 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:37:13.051 -05 000000085 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:37:13.095 -05 000000079 INF: FPGA: Recv TDIYARM3 15-12-21 22:37:13.095 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:37:13.098 -05 000000085 INF: ===================TDI FPGA Arm=================== 15-12-21 22:37:13.102 -05 000000085 INF: ====================================== 15-12-21 22:37:13.104 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:37:13.106 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:13.106 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:13.108 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:13.109 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:13.111 -05 000000068 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:37:13.111 -05 000000068 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:37:13.111 -05 000000068 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:37:13.111 -05 000000068 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:37:13.112 -05 000000068 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:37:13.113 -05 000000049 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:37:13.119 -05 000000049 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:37:13.119 -05 000000049 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:37:13.119 -05 000000049 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:37:13.120 -05 000000049 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:37:13.256 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:13.296 -05 000000024 INF: FPGA: Recv EX1MV 15-12-21 22:37:13.297 -05 000000049 INF: Excitation Filter 1: Moved -36 steps in 177.5726 ms 15-12-21 22:37:13.297 -05 000000049 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 177.6985 ms 15-12-21 22:37:13.297 -05 000000049 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 177.8291 ms 15-12-21 22:37:13.298 -05 000000049 INF: ====================================== 15-12-21 22:37:13.300 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.986C:A1\r\n 15-12-21 22:37:13.300 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:13.538 -05 000000055 INF: FPGA: Recv EX2MV 15-12-21 22:37:13.538 -05 000000068 INF: Excitation Filter 2: Moved -107 steps in 426.4589 ms 15-12-21 22:37:13.538 -05 000000068 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 426.6568 ms 15-12-21 22:37:13.538 -05 000000068 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 426.9862 ms 15-12-21 22:37:13.540 -05 000000068 INF: ====================================== 15-12-21 22:37:13.556 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:13.559 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:13.570 -05 000000055 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:37:13.570 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 22:37:13.570 -05 000000080 INF: ===================Move Y Motor without settling=================== 15-12-21 22:37:13.570 -05 000000080 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:37:13.585 -05 000000080 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:37:13.589 -05 000000068 INF: ===================FPGA Z Wait=================== 15-12-21 22:37:13.589 -05 000000068 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:37:13.590 -05 000000080 INF: Y Motor: Xmit 1G\n 15-12-21 22:37:13.590 -05 000000055 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:37:13.590 -05 000000056 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:37:13.708 -05 000000055 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:37:13.708 -05 000000079 INF: ===================Camera TDI=================== 15-12-21 22:37:13.708 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 22:37:13.723 -05 000000080 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:37:13.724 -05 000000080 INF: Y Motor: Recv 1G\r\n 15-12-21 22:37:13.727 -05 000000080 INF: Y Motor: Xmit 1D\n 15-12-21 22:37:13.768 -05 000000080 INF: Y Motor: Recv 1D\r\n 15-12-21 22:37:13.769 -05 000000080 INF: Y Motor: Recv *407662\r\n 15-12-21 22:37:13.770 -05 000000080 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:37:13.885 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:13.891 -05 000000028 INF: FPGA: Recv ZWAIT 15-12-21 22:37:13.892 -05 000000068 INF: ====================================== 15-12-21 22:37:13.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:13.893 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:13.908 -05 000000095 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:37:13.964 -05 000000065 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207=================== 15-12-21 22:37:14.016 -05 000000011 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207, Registering and Extracting C040 L001 T2209=================== 15-12-21 22:37:14.056 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:14.079 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:14.079 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:14.190 -05 000000023 INF: ===================Frame #12=================== 15-12-21 22:37:14.190 -05 000000079 INF: ===================Frame #12=================== 15-12-21 22:37:14.256 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:14.281 -05 000000094 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207=================== 15-12-21 22:37:14.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:14.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:14.316 -05 000000066 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207, Registering and Extracting C040 L001 T2210=================== 15-12-21 22:37:14.431 -05 000000023 INF: ===================Frame #31=================== 15-12-21 22:37:14.434 -05 000000079 INF: ===================Frame #31=================== 15-12-21 22:37:14.465 -05 000000075 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207=================== 15-12-21 22:37:14.516 -05 000000038 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207, Registering and Extracting C040 L001 T2211=================== 15-12-21 22:37:14.581 -05 000000023 INF: ===================Frame #43=================== 15-12-21 22:37:14.582 -05 000000071 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2207=================== 15-12-21 22:37:14.584 -05 000000079 INF: ===================Frame #43=================== 15-12-21 22:37:14.587 -05 000000074 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206=================== 15-12-21 22:37:14.615 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:14.615 -05 000000077 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212, Registering and Extracting C040 L001 T2213=================== 15-12-21 22:37:14.615 -05 000000040 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212, Registering and Extracting C040 L001 T2213=================== 15-12-21 22:37:14.627 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.088C:A1\r\n 15-12-21 22:37:14.627 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:14.732 -05 000000023 INF: ===================Frame #55=================== 15-12-21 22:37:14.735 -05 000000079 INF: ===================Frame #55=================== 15-12-21 22:37:14.788 -05 000000009 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212=================== 15-12-21 22:37:14.815 -05 000000051 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212, Registering and Extracting C040 L001 T2214=================== 15-12-21 22:37:14.882 -05 000000023 INF: ===================Frame #67=================== 15-12-21 22:37:14.885 -05 000000079 INF: ===================Frame #67=================== 15-12-21 22:37:14.909 -05 000000095 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:37:15.019 -05 000000089 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212=================== 15-12-21 22:37:15.033 -05 000000023 INF: ===================Frame #79=================== 15-12-21 22:37:15.035 -05 000000079 INF: ===================Frame #79=================== 15-12-21 22:37:15.122 -05 000000027 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212, Registering and Extracting C040 L001 T2215=================== 15-12-21 22:37:15.183 -05 000000023 INF: ===================Frame #90=================== 15-12-21 22:37:15.185 -05 000000079 INF: ===================Frame #91=================== 15-12-21 22:37:15.341 -05 000000079 INF: ===================Frame #102=================== 15-12-21 22:37:15.343 -05 000000060 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212=================== 15-12-21 22:37:15.442 -05 000000048 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212, Registering and Extracting C040 L001 T2216=================== 15-12-21 22:37:15.607 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:15.727 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:15.727 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:15.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:15.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:15.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:15.909 -05 000000095 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:37:16.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:16.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:16.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:16.049 -05 000000023 INF: ===================Frame #159=================== 15-12-21 22:37:16.200 -05 000000023 INF: ===================Frame #171=================== 15-12-21 22:37:16.337 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:16.353 -05 000000023 INF: ===================Frame #183=================== 15-12-21 22:37:16.356 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 22:37:16.356 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:16.453 -05 000000079 INF: ===================Frame #191=================== 15-12-21 22:37:16.503 -05 000000023 INF: ===================Frame #195=================== 15-12-21 22:37:16.611 -05 000000079 INF: ===================Frame #203=================== 15-12-21 22:37:16.653 -05 000000023 INF: ===================Frame #207=================== 15-12-21 22:37:16.762 -05 000000079 INF: ===================Frame #215=================== 15-12-21 22:37:16.827 -05 000000023 INF: ===================Frame #218=================== 15-12-21 22:37:16.909 -05 000000095 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:37:16.913 -05 000000079 INF: ===================Frame #227=================== 15-12-21 22:37:17.063 -05 000000079 INF: ===================Frame #239=================== 15-12-21 22:37:17.214 -05 000000079 INF: ===================Frame #251=================== 15-12-21 22:37:17.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:17.364 -05 000000079 INF: ===================Frame #263=================== 15-12-21 22:37:17.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:17.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:17.515 -05 000000079 INF: ===================Frame #275=================== 15-12-21 22:37:17.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:17.545 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:17.545 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:17.550 -05 000000023 INF: ===================Frame #278=================== 15-12-21 22:37:17.647 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:17.665 -05 000000079 INF: ===================Frame #287=================== 15-12-21 22:37:17.668 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:17.668 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:17.816 -05 000000079 INF: ===================Frame #298=================== 15-12-21 22:37:17.865 -05 000000023 INF: ===================Frame #302=================== 15-12-21 22:37:17.911 -05 000000095 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:37:18.133 -05 000000023 INF: ===================Frame #324=================== 15-12-21 22:37:18.368 -05 000000023 INF: ===================Frame #342=================== 15-12-21 22:37:18.420 -05 000000011 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206, Registering and Extracting C040 L001 T2212=================== 15-12-21 22:37:18.425 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:18.478 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.006C:A1\r\n 15-12-21 22:37:18.478 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:18.529 -05 000000079 INF: ===================Frame #355=================== 15-12-21 22:37:18.561 -05 000000023 INF: ===================Frame #357=================== 15-12-21 22:37:18.681 -05 000000079 INF: ===================Frame #367=================== 15-12-21 22:37:18.713 -05 000000023 INF: ===================Frame #369=================== 15-12-21 22:37:18.778 -05 000000095 INF: ===================WaitCommand=================== 15-12-21 22:37:18.779 -05 000000095 INF: WaitCommand(15000) end 15-12-21 22:37:18.779 -05 000000095 INF: ====================================== 15-12-21 22:37:18.781 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:18.788 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:18.798 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:18.818 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:18.834 -05 000000079 INF: ===================Frame #379=================== 15-12-21 22:37:18.871 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:18.871 -05 000000023 INF: ===================Frame #382=================== 15-12-21 22:37:18.872 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 22:37:18.872 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:18.873 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:37:18.981 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:37:18.991 -05 000000079 INF: ===================Frame #391=================== 15-12-21 22:37:18.993 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:37:18.993 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:19.142 -05 000000079 INF: ===================Frame #403=================== 15-12-21 22:37:19.274 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:19.294 -05 000000079 INF: ===================Frame #415=================== 15-12-21 22:37:19.338 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:19.338 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:19.382 -05 000000066 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205, Registering and Extracting C040 L001 T2206=================== 15-12-21 22:37:19.440 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:37:19.444 -05 000000079 INF: ===================Frame #427=================== 15-12-21 22:37:19.460 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:37:19.460 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:19.516 -05 000000023 INF: ===================Frame #433=================== 15-12-21 22:37:19.580 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:19.632 -05 000000079 INF: ===================Frame #442=================== 15-12-21 22:37:19.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:19.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:19.668 -05 000000023 INF: ===================Frame #445=================== 15-12-21 22:37:19.756 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:37:19.826 -05 000000023 INF: ===================Frame #457=================== 15-12-21 22:37:19.837 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:37:19.837 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:19.896 -05 000000038 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204, Registering and Extracting C040 L001 T2205=================== 15-12-21 22:37:19.942 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:19.943 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:19.943 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:37:19.962 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.136C:A1\r\n 15-12-21 22:37:19.962 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:19.971 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:19.976 -05 000000023 INF: ===================Frame #469=================== 15-12-21 22:37:20.051 -05 000000077 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203, Registering and Extracting C040 L001 T2204=================== 15-12-21 22:37:20.068 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:20.070 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:20.082 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 120, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:37:20.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:20.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:20.111 -05 000000079 INF: ===================Frame #480=================== 15-12-21 22:37:20.126 -05 000000023 INF: ===================Frame #481=================== 15-12-21 22:37:20.170 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:37:20.210 -05 000000040 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202, Registering and Extracting C040 L001 T2203=================== 15-12-21 22:37:20.217 -05 000000051 INF: ===================Registering and Extracting C040 L001 T2201, Registering and Extracting C040 L001 T2202=================== 15-12-21 22:37:20.255 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:37:20.255 -05 000000057 INF: Current Position of Pump is: 0 15-12-21 22:37:20.257 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:37:20.271 -05 000000027 INF: ===================Registering and Extracting C040 L001 T2201=================== 15-12-21 22:37:20.276 -05 000000023 INF: ===================Frame #493=================== 15-12-21 22:37:20.306 -05 000000079 INF: ===================Frame #495=================== 15-12-21 22:37:20.356 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V4800s231P23040R\r 15-12-21 22:37:20.426 -05 000000023 INF: ===================Frame #505=================== 15-12-21 22:37:20.443 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:20.457 -05 000000079 INF: ===================Frame #507=================== 15-12-21 22:37:20.469 -05 000000048 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:37:20.477 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:20.486 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:37:20.543 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:20.579 -05 000000023 INF: ===================Frame #517=================== 15-12-21 22:37:20.585 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:20.590 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:37:20.607 -05 000000079 INF: ===================Frame #519=================== 15-12-21 22:37:20.630 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:20.709 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:20.714 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:37:20.733 -05 000000023 INF: ===================Frame #529=================== 15-12-21 22:37:20.758 -05 000000079 INF: ===================Frame #531=================== 15-12-21 22:37:20.819 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:20.827 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:37:20.880 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:20.883 -05 000000023 INF: ===================Frame #541=================== 15-12-21 22:37:20.908 -05 000000079 INF: ===================Frame #543=================== 15-12-21 22:37:20.922 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:20.942 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:21.034 -05 000000023 INF: ===================Frame #553=================== 15-12-21 22:37:21.059 -05 000000079 INF: ===================Frame #555=================== 15-12-21 22:37:21.186 -05 000000023 INF: ===================Frame #565=================== 15-12-21 22:37:21.192 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:21.210 -05 000000079 INF: ===================Frame #567=================== 15-12-21 22:37:21.255 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:21.311 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:21.334 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:21.334 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:21.336 -05 000000023 INF: ===================Frame #577=================== 15-12-21 22:37:21.360 -05 000000079 INF: ===================Frame #579=================== 15-12-21 22:37:21.437 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:21.459 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:21.459 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:21.488 -05 000000023 INF: ===================Frame #589=================== 15-12-21 22:37:21.505 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:21.510 -05 000000079 INF: ===================Frame #591=================== 15-12-21 22:37:21.561 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:21.565 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:21.582 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:37:21.582 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:21.638 -05 000000023 INF: ===================Frame #601=================== 15-12-21 22:37:21.660 -05 000000079 INF: ===================Frame #602=================== 15-12-21 22:37:21.684 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:21.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:21.707 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:21.790 -05 000000023 INF: ===================Frame #613=================== 15-12-21 22:37:21.815 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:21.879 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:21.941 -05 000000023 INF: ===================Frame #625=================== 15-12-21 22:37:22.091 -05 000000023 INF: ===================Frame #637=================== 15-12-21 22:37:22.129 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:22.181 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:37:22.191 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:22.201 -05 000000079 INF: ===================Frame #645=================== 15-12-21 22:37:22.242 -05 000000023 INF: ===================Frame #649=================== 15-12-21 22:37:22.351 -05 000000079 INF: ===================Frame #657=================== 15-12-21 22:37:22.392 -05 000000023 INF: ===================Frame #660=================== 15-12-21 22:37:22.441 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:22.502 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:22.502 -05 000000079 INF: ===================Frame #669=================== 15-12-21 22:37:22.653 -05 000000079 INF: ===================Frame #681=================== 15-12-21 22:37:22.752 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:22.804 -05 000000079 INF: ===================Frame #693=================== 15-12-21 22:37:22.817 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:22.857 -05 000000023 INF: ===================Frame #697=================== 15-12-21 22:37:22.955 -05 000000079 INF: ===================Frame #705=================== 15-12-21 22:37:23.000 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:23.007 -05 000000023 INF: ===================Frame #709=================== 15-12-21 22:37:23.019 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:23.019 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:23.067 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:23.109 -05 000000079 INF: ===================Frame #717=================== 15-12-21 22:37:23.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:23.133 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:23.157 -05 000000023 INF: ===================Frame #721=================== 15-12-21 22:37:23.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:23.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:23.260 -05 000000079 INF: ===================Frame #729=================== 15-12-21 22:37:23.307 -05 000000023 INF: ===================Frame #733=================== 15-12-21 22:37:23.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:23.329 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:23.329 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:23.383 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:23.411 -05 000000079 INF: ===================Frame #741=================== 15-12-21 22:37:23.438 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:23.457 -05 000000023 INF: ===================Frame #745=================== 15-12-21 22:37:23.561 -05 000000079 INF: ===================Frame #753=================== 15-12-21 22:37:23.580 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:23.607 -05 000000023 INF: ===================Frame #756=================== 15-12-21 22:37:23.641 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.010C:A1\r\n 15-12-21 22:37:23.641 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:23.688 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:23.714 -05 000000079 INF: ===================Frame #765=================== 15-12-21 22:37:23.752 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:23.865 -05 000000079 INF: ===================Frame #777=================== 15-12-21 22:37:23.905 -05 000000023 INF: ===================Frame #780=================== 15-12-21 22:37:24.002 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:24.015 -05 000000079 INF: ===================Frame #789=================== 15-12-21 22:37:24.062 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:24.085 -05 000000023 INF: ===================Frame #794=================== 15-12-21 22:37:24.165 -05 000000079 INF: ===================Frame #801=================== 15-12-21 22:37:24.252 -05 000000023 INF: ===================Frame #807=================== 15-12-21 22:37:24.312 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:24.316 -05 000000079 INF: ===================Frame #812=================== 15-12-21 22:37:24.375 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:24.403 -05 000000023 INF: ===================Frame #819=================== 15-12-21 22:37:24.550 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:24.555 -05 000000023 INF: ===================Frame #831=================== 15-12-21 22:37:24.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:24.578 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:24.625 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:24.681 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:24.685 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:24.705 -05 000000023 INF: ===================Frame #843=================== 15-12-21 22:37:24.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:24.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:24.731 -05 000000079 INF: ===================Frame #845=================== 15-12-21 22:37:24.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:24.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:24.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:24.856 -05 000000023 INF: ===================Frame #855=================== 15-12-21 22:37:24.881 -05 000000079 INF: ===================Frame #857=================== 15-12-21 22:37:24.935 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:24.999 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:25.007 -05 000000023 INF: ===================Frame #867=================== 15-12-21 22:37:25.031 -05 000000079 INF: ===================Frame #869=================== 15-12-21 22:37:25.068 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:25.139 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.886C:A1\r\n 15-12-21 22:37:25.139 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:25.157 -05 000000023 INF: ===================Frame #879=================== 15-12-21 22:37:25.181 -05 000000079 INF: ===================Frame #881=================== 15-12-21 22:37:25.251 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:25.311 -05 000000023 INF: ===================Frame #891=================== 15-12-21 22:37:25.312 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:25.331 -05 000000079 INF: ===================Frame #893=================== 15-12-21 22:37:25.462 -05 000000023 INF: ===================Frame #903=================== 15-12-21 22:37:25.481 -05 000000079 INF: ===================Frame #905=================== 15-12-21 22:37:25.562 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:25.612 -05 000000023 INF: ===================Frame #915=================== 15-12-21 22:37:25.622 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:25.631 -05 000000079 INF: ===================Frame #916=================== 15-12-21 22:37:25.763 -05 000000023 INF: ===================Frame #927=================== 15-12-21 22:37:25.872 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:25.900 -05 000000079 INF: ===================Frame #938=================== 15-12-21 22:37:25.913 -05 000000023 INF: ===================Frame #939=================== 15-12-21 22:37:25.933 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:25.933 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:37:26.034 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:37:26.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:26.063 -05 000000023 INF: ===================Frame #951=================== 15-12-21 22:37:26.076 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:26.076 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:26.077 -05 000000079 INF: ===================Frame #952=================== 15-12-21 22:37:26.121 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 22:37:26.121 -05 000000057 INF: Current Position of Pump is: 23040 15-12-21 22:37:26.121 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:37:26.176 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:26.200 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:26.200 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:26.214 -05 000000023 INF: ===================Frame #963=================== 15-12-21 22:37:26.221 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:37:26.242 -05 000000079 INF: ===================Frame #965=================== 15-12-21 22:37:26.300 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:26.310 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:26.326 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:26.326 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:26.364 -05 000000023 INF: ===================Frame #974=================== 15-12-21 22:37:26.392 -05 000000079 INF: ===================Frame #977=================== 15-12-21 22:37:26.410 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:26.495 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:26.542 -05 000000079 INF: ===================Frame #988=================== 15-12-21 22:37:26.684 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:26.713 -05 000000023 INF: ===================Frame #1002=================== 15-12-21 22:37:26.741 -05 000000079 INF: ===================Frame #1004=================== 15-12-21 22:37:26.745 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:26.763 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:37:26.763 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:26.809 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:26.809 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:26.809 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:37:26.863 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:37:26.886 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:37:26.886 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:26.890 -05 000000023 INF: ===================Frame #1016=================== 15-12-21 22:37:26.910 -05 000000079 INF: ===================Frame #1018=================== 15-12-21 22:37:26.990 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:37:27.013 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:37:27.013 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:27.054 -05 000000023 INF: ===================Frame #1029=================== 15-12-21 22:37:27.074 -05 000000079 INF: ===================Frame #1031=================== 15-12-21 22:37:27.121 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:37:27.136 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:37:27.136 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:27.204 -05 000000023 INF: ===================Frame #1041=================== 15-12-21 22:37:27.225 -05 000000079 INF: ===================Frame #1042=================== 15-12-21 22:37:27.243 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:27.243 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:27.244 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:27.244 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:27.245 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:27.245 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°=================== 15-12-21 22:37:27.245 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:0:20.00\r 15-12-21 22:37:27.324 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:37:27.324 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:27.356 -05 000000023 INF: ===================Frame #1053=================== 15-12-21 22:37:27.406 -05 000000079 INF: ===================Frame #1057=================== 15-12-21 22:37:27.507 -05 000000023 INF: ===================Frame #1065=================== 15-12-21 22:37:27.554 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:27.554 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:27.555 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:27.558 -05 000000057 INF: WaitCommand(15000) start 15-12-21 22:37:27.558 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 15 of 15 seconds left=================== 15-12-21 22:37:27.559 -05 000000079 INF: ===================Frame #1069=================== 15-12-21 22:37:27.657 -05 000000023 INF: ===================Frame #1077=================== 15-12-21 22:37:27.674 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:27.698 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:27.698 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:27.709 -05 000000079 INF: ===================Frame #1081=================== 15-12-21 22:37:27.804 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:27.807 -05 000000023 INF: ===================Frame #1088=================== 15-12-21 22:37:27.824 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:27.824 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:27.860 -05 000000079 INF: ===================Frame #1093=================== 15-12-21 22:37:27.928 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:28.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:28.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:28.010 -05 000000079 INF: ===================Frame #1105=================== 15-12-21 22:37:28.030 -05 000000023 INF: ===================Frame #1106=================== 15-12-21 22:37:28.160 -05 000000079 INF: ===================Frame #1116=================== 15-12-21 22:37:28.201 -05 000000023 INF: ===================Frame #1120=================== 15-12-21 22:37:28.374 -05 000000023 INF: ===================Frame #1133=================== 15-12-21 22:37:28.389 -05 000000079 INF: ===================Frame #1134=================== 15-12-21 22:37:28.524 -05 000000023 INF: ===================Frame #1145=================== 15-12-21 22:37:28.556 -05 000000079 INF: ===================Frame #1148=================== 15-12-21 22:37:28.559 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:28.559 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 14 of 15 seconds left=================== 15-12-21 22:37:28.674 -05 000000023 INF: ===================Frame #1157=================== 15-12-21 22:37:28.719 -05 000000079 INF: ===================Frame #1161=================== 15-12-21 22:37:28.747 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:28.821 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.989C:A1\r\n 15-12-21 22:37:28.821 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:28.824 -05 000000023 INF: ===================Frame #1169=================== 15-12-21 22:37:28.869 -05 000000079 INF: ===================Frame #1172=================== 15-12-21 22:37:28.974 -05 000000023 INF: ===================Frame #1181=================== 15-12-21 22:37:29.045 -05 000000079 INF: ===================Frame #1186=================== 15-12-21 22:37:29.124 -05 000000023 INF: ===================Frame #1193=================== 15-12-21 22:37:29.208 -05 000000079 INF: ===================Frame #1199=================== 15-12-21 22:37:29.236 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:29.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:29.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:29.275 -05 000000023 INF: ===================Frame #1205=================== 15-12-21 22:37:29.359 -05 000000079 INF: ===================Frame #1211=================== 15-12-21 22:37:29.367 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:29.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:29.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:29.425 -05 000000023 INF: ===================Frame #1216=================== 15-12-21 22:37:29.488 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:29.509 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:29.509 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:29.509 -05 000000079 INF: ===================Frame #1223=================== 15-12-21 22:37:29.559 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:29.559 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 13 of 15 seconds left=================== 15-12-21 22:37:29.659 -05 000000079 INF: ===================Frame #1235=================== 15-12-21 22:37:29.671 -05 000000023 INF: ===================Frame #1236=================== 15-12-21 22:37:29.811 -05 000000079 INF: ===================Frame #1247=================== 15-12-21 22:37:29.840 -05 000000023 INF: ===================Frame #1249=================== 15-12-21 22:37:29.864 -05 000000081 INF: FPGA: Recv TDIYWAIT 15-12-21 22:37:29.864 -05 000000055 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:37:29.872 -05 000000055 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:37:29.874 -05 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:37:29.874 -05 000000022 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:37:29.874 -05 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:37:29.874 -05 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:37:29.874 -05 000000078 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:37:29.874 -05 000000078 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:37:29.874 -05 000000022 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:37:29.874 -05 000000022 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:37:29.874 -05 000000022 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:37:29.880 -05 000000022 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:37:29.961 -05 000000079 INF: ===================Frame #1250=================== 15-12-21 22:37:29.990 -05 000000023 INF: ===================Frame #1250=================== 15-12-21 22:37:30.014 -05 000000023 INF: Camera complete - got 1250 frames. 15-12-21 22:37:30.015 -05 000000023 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:37:30.039 -05 000000079 INF: Camera complete - got 1250 frames. 15-12-21 22:37:30.040 -05 000000079 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:37:30.051 -05 000000063 INF: FPGA: Recv EX1MV 15-12-21 22:37:30.051 -05 000000022 INF: Excitation Filter 1: Moved 36 steps in 176.8544 ms 15-12-21 22:37:30.051 -05 000000022 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 176.9598 ms 15-12-21 22:37:30.051 -05 000000022 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 177.0586 ms 15-12-21 22:37:30.052 -05 000000022 INF: ====================================== 15-12-21 22:37:30.265 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:30.269 -05 000000022 INF: FPGA: Recv EX2MV 15-12-21 22:37:30.269 -05 000000078 INF: Excitation Filter 2: Moved 107 steps in 395.1538 ms 15-12-21 22:37:30.269 -05 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 395.2463 ms 15-12-21 22:37:30.269 -05 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 395.3162 ms 15-12-21 22:37:30.270 -05 000000078 INF: ====================================== 15-12-21 22:37:30.272 -05 000000055 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:37:30.274 -05 000000055 INF: ====================================== 15-12-21 22:37:30.358 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.815C:A1\r\n 15-12-21 22:37:30.366 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:30.560 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:30.560 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 12 of 15 seconds left=================== 15-12-21 22:37:30.717 -05 000000080 INF: Y Motor: Moved to 9.0765 after 16947 ms 15-12-21 22:37:30.718 -05 000000080 INF: ====================================== 15-12-21 22:37:30.722 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 22:37:30.745 -05 000000023 INF: ====================================== 15-12-21 22:37:30.783 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:30.801 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:30.801 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:30.909 -05 000000079 INF: ===================Camera TDI=================== 15-12-21 22:37:30.933 -05 000000079 INF: ====================================== 15-12-21 22:37:30.936 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 22:37:30.939 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:30.943 -05 000000056 INF: ====================================== 15-12-21 22:37:30.950 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:30.955 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:30.959 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:30.960 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:37:31.002 -05 000000063 INF: FPGA: Recv TDICLINES 9753 15-12-21 22:37:31.002 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:37:31.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:31.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:31.064 -05 000000068 INF: FPGA: Recv TDIYERD 907651 15-12-21 22:37:31.064 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:37:31.104 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:31.129 -05 000000028 INF: FPGA: Recv ZADCR 25039 15-12-21 22:37:31.129 -05 000000062 INF: At scan end Y pos = 9.077 and Z pos = -0.095. Y moved -60.303 mm 15-12-21 22:37:31.129 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:37:31.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:31.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:31.191 -05 000000029 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:37:31.191 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:37:31.192 -05 000000062 INF: TDIScan finished after 22282.7791 ms 15-12-21 22:37:31.192 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:37:31.192 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:37:31.198 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.225 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.028 um 15-12-21 22:37:31.226 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.237 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.238 -05 000000081 INF: ===================Dither Clean Up Command=================== 15-12-21 22:37:31.238 -05 000000085 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:37:31.238 -05 000000085 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:37:31.238 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:37:31.238 -05 000000023 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:37:31.239 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:37:31.241 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:37:31.244 -05 000000049 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:37:31.245 -05 000000049 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:37:31.245 -05 000000068 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:31.245 -05 000000068 INF: ===================LFT:Extracting coords=================== 15-12-21 22:37:31.252 -05 000000080 INF: FPGA: Recv ZSTEP 15-12-21 22:37:31.252 -05 000000080 INF: FPGA: Recv ZSEL 15-12-21 22:37:31.252 -05 000000049 INF: FPGA: Xmit ZDACW 31083\n 15-12-21 22:37:31.252 -05 000000055 INF: ====================================== 15-12-21 22:37:31.277 -05 000000068 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:31.282 -05 000000068 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:37:31.284 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:31.284 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:31.284 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:31.284 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:31.285 -05 000000063 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:31.285 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:31.285 -05 000000028 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:31.285 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:31.314 -05 000000080 INF: FPGA: Recv ZDACW 15-12-21 22:37:31.315 -05 000000085 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:37:31.315 -05 000000049 INF: ====================================== 15-12-21 22:37:31.316 -05 000000085 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:37:31.316 -05 000000023 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:37:31.316 -05 000000085 INF: ====================================== 15-12-21 22:37:31.377 -05 000000023 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:37:31.378 -05 000000023 INF: ====================================== 15-12-21 22:37:31.462 -05 000000078 INF: LFT found best fwhm score 2.41773 in 123 ms 15-12-21 22:37:31.462 -05 000000078 INF: LFT found good score at index 857 with fwhm value 2.41773. Next cycle, cycle 41 starting Z position for bottom surface is at -0.102 mm FC:B, C:40,L:2,B 15-12-21 22:37:31.463 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:31.463 -05 000000078 INF: ====================================== 15-12-21 22:37:31.464 -05 000000056 INF: LFT found best fwhm score 2.535242 in 124 ms 15-12-21 22:37:31.464 -05 000000056 INF: LFT found good score at index 1 with fwhm value 2.535242. Next cycle, cycle 41 starting Z position for bottom surface is at -0.103 mm FC:B, C:40,L:2,B 15-12-21 22:37:31.464 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:31.464 -05 000000063 INF: LFT found best fwhm score 2.323168 in 124 ms 15-12-21 22:37:31.464 -05 000000063 INF: LFT found good score at index 5357 with fwhm value 2.323168. Next cycle, cycle 41 starting Z position for bottom surface is at -0.101 mm FC:B, C:40,L:2,B 15-12-21 22:37:31.464 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:31.464 -05 000000056 INF: ====================================== 15-12-21 22:37:31.465 -05 000000063 INF: ====================================== 15-12-21 22:37:31.465 -05 000000028 INF: LFT found best fwhm score 2.496123 in 125 ms 15-12-21 22:37:31.465 -05 000000028 INF: LFT found good score at index 8841 with fwhm value 2.496123. Next cycle, cycle 41 starting Z position for bottom surface is at -0.100 mm FC:B, C:40,L:2,B 15-12-21 22:37:31.465 -05 000000028 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:31.465 -05 000000028 INF: ====================================== 15-12-21 22:37:31.468 -05 000000068 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:31.471 -05 000000068 INF: LFT weighted average best Z for bottom surface is at -0.102mm FC:B, C:40,L:2,B 15-12-21 22:37:31.472 -05 000000068 INF: ====================================== 15-12-21 22:37:31.475 -05 000000081 INF: ====================================== 15-12-21 22:37:31.476 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.481 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:37:31.481 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.481 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:37:31.482 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.482 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:37:31.482 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.482 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:37:31.482 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.483 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:37:31.483 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:37:31.485 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 12 of 15 seconds left, Waiting for image analysis=================== 15-12-21 22:37:31.485 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 12 of 15 seconds left=================== 15-12-21 22:37:31.485 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:37:31.485 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 80.257 Y = 39.38=================== 15-12-21 22:37:31.485 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:37:31.486 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:31.486 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:31.486 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:37:31.486 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:37:31.487 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:37:31.501 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.501 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:37:31.502 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:31.502 -05 000000062 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -118.6 um, section = B_1 15-12-21 22:37:31.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:37:31.506 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:37:31.507 -05 000000068 INF: ===================MoveEmissionFilters=================== 15-12-21 22:37:31.507 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:37:31.507 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 22:37:31.508 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:37:31.508 -05 000000081 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:37:31.508 -05 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:37:31.508 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:37:31.508 -05 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:37:31.508 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:37:31.508 -05 000000055 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:37:31.509 -05 000000022 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:37:31.519 -05 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:37:31.519 -05 000000029 INF: ===================Move X Motor without settling=================== 15-12-21 22:37:31.519 -05 000000079 INF: ===================Move Y Motor without settling=================== 15-12-21 22:37:31.519 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:37:31.520 -05 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:37:31.520 -05 000000022 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:37:31.520 -05 000000029 INF: X Motor: Xmit PR VM\n 15-12-21 22:37:31.520 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:37:31.525 -05 000000079 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:37:31.525 -05 000000049 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:37:31.525 -05 000000079 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:37:31.525 -05 000000090 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:37:31.525 -05 000000078 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:37:31.525 -05 000000056 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:37:31.529 -05 000000079 INF: Y Motor: Xmit 1G\n 15-12-21 22:37:31.529 -05 000000063 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:37:31.530 -05 000000080 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:37:31.530 -05 000000049 INF: ====================================== 15-12-21 22:37:31.530 -05 000000056 INF: ====================================== 15-12-21 22:37:31.530 -05 000000080 INF: ====================================== 15-12-21 22:37:31.531 -05 000000063 INF: ====================================== 15-12-21 22:37:31.536 -05 000000078 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:37:31.536 -05 000000090 INF: ====================================== 15-12-21 22:37:31.536 -05 000000078 INF: ====================================== 15-12-21 22:37:31.543 -05 000000085 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:37:31.544 -05 000000049 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:37:31.544 -05 000000049 INF: ====================================== 15-12-21 22:37:31.544 -05 000000080 INF: ===================TDI Scan Setup=================== 15-12-21 22:37:31.547 -05 000000056 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:37:31.547 -05 000000023 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:37:31.548 -05 000000085 INF: ====================================== 15-12-21 22:37:31.549 -05 000000056 INF: ====================================== 15-12-21 22:37:31.549 -05 000000028 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:37:31.550 -05 000000022 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:37:31.550 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:31.550 -05 000000063 INF: ===================Camera Arm TDI=================== 15-12-21 22:37:31.553 -05 000000023 INF: ====================================== 15-12-21 22:37:31.553 -05 000000080 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:37:31.554 -05 000000080 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:37:31.560 -05 000000022 INF: ====================================== 15-12-21 22:37:31.560 -05 000000080 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:37:31.560 -05 000000028 INF: ====================================== 15-12-21 22:37:31.561 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:31.561 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 11 of 15 seconds left=================== 15-12-21 22:37:31.563 -05 000000068 INF: ====================================== 15-12-21 22:37:31.567 -05 000000029 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:37:31.567 -05 000000029 INF: X Motor: Xmit PR VI\n 15-12-21 22:37:31.568 -05 000000079 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:37:31.569 -05 000000079 INF: Y Motor: Recv 1G\r\n 15-12-21 22:37:31.570 -05 000000079 INF: Y Motor: Xmit 1D\n 15-12-21 22:37:31.627 -05 000000028 INF: FPGA: Recv ZSEL 15-12-21 22:37:31.627 -05 000000080 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:37:31.628 -05 000000079 INF: Y Motor: Recv 1D\r\n 15-12-21 22:37:31.628 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:31.629 -05 000000079 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:37:31.630 -05 000000029 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:37:31.630 -05 000000029 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:37:31.630 -05 000000029 INF: X Motor: Moving to 81.0290 mm @15.000 mm/sec, started at 80.2573 mm 15-12-21 22:37:31.630 -05 000000079 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:37:31.630 -05 000000029 INF: X Motor: Xmit MA 9023\n 15-12-21 22:37:31.633 -05 000000080 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:37:31.634 -05 000000080 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:37:31.634 -05 000000080 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:37:31.694 -05 000000028 INF: FPGA: Recv ZSTEP 15-12-21 22:37:31.695 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:31.696 -05 000000029 INF: X Motor: Recv MA 9023\r\n> 15-12-21 22:37:31.696 -05 000000029 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:37:31.697 -05 000000080 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:37:31.698 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:31.702 -05 000000080 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:37:31.702 -05 000000080 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:37:31.702 -05 000000080 INF: Z Motor: Arming to move to -0.0786 mm 15-12-21 22:37:31.702 -05 000000080 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:37:31.703 -05 000000040 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105=================== 15-12-21 22:37:31.703 -05 000000048 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105=================== 15-12-21 22:37:31.703 -05 000000051 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106=================== 15-12-21 22:37:31.703 -05 000000038 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106=================== 15-12-21 22:37:31.704 -05 000000066 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2107=================== 15-12-21 22:37:31.704 -05 000000011 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2107, Registering and Extracting C040 L002 T2108=================== 15-12-21 22:37:31.704 -05 000000027 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105=================== 15-12-21 22:37:31.705 -05 000000077 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105=================== 15-12-21 22:37:31.752 -05 000000049 INF: FPGA: Recv ZYT 15-12-21 22:37:31.752 -05 000000080 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907646 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:37:31.752 -05 000000080 INF: FPGA: Xmit ZARM 20597\n 15-12-21 22:37:31.814 -05 000000078 INF: FPGA: Recv ZARM 15-12-21 22:37:31.814 -05 000000080 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.8643 ms 15-12-21 22:37:31.814 -05 000000080 INF: Z Motor: ArmAbsStepped took 112.1412 ms 15-12-21 22:37:31.815 -05 000000080 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:37:31.816 -05 000000080 INF: ===================TDI Scan Setup=================== 15-12-21 22:37:31.821 -05 000000080 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:37:31.821 -05 000000080 INF: ===================TDI Scan Setup=================== 15-12-21 22:37:31.830 -05 000000080 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:37:31.831 -05 000000080 INF: ===================TDI Scan Setup=================== 15-12-21 22:37:31.833 -05 000000080 INF: ====================================== 15-12-21 22:37:31.863 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:31.878 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.019C:A1\r\n 15-12-21 22:37:31.878 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:32.174 -05 000000029 INF: X Motor: Xmit PR ER\n 15-12-21 22:37:32.240 -05 000000029 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:37:32.240 -05 000000029 INF: X Motor: Moved to 81.0288 after 544 ms 15-12-21 22:37:32.241 -05 000000029 INF: ====================================== 15-12-21 22:37:32.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:32.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:32.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:32.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:32.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:32.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:32.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:32.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 10 of 15 seconds left=================== 15-12-21 22:37:32.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:32.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:32.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:33.249 -05 000000063 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:37:33.249 -05 000000063 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:37:33.249 -05 000000063 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:37:33.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:33.564 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 9 of 15 seconds left=================== 15-12-21 22:37:34.026 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:34.073 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.986C:A1\r\n 15-12-21 22:37:34.073 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:34.239 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:34.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:34.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:34.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:34.501 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:34.501 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:34.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:34.579 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 8 of 15 seconds left=================== 15-12-21 22:37:34.632 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:34.703 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:34.703 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:34.826 -05 000000063 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:37:34.826 -05 000000063 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:37:34.826 -05 000000063 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:37:34.828 -05 000000063 INF: ====================================== 15-12-21 22:37:34.830 -05 000000081 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:37:34.843 -05 000000081 INF: ====================================== 15-12-21 22:37:35.203 -05 000000079 INF: Y Motor: Moved to 70.6886 after 3573 ms 15-12-21 22:37:35.204 -05 000000079 INF: ====================================== 15-12-21 22:37:35.206 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 22:37:35.208 -05 000000055 INF: ====================================== 15-12-21 22:37:35.214 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:37:35.222 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:35.222 -05 000000062 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:37:35.263 -05 000000062 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:37:35.264 -05 000000062 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:37:35.325 -05 000000063 INF: FPGA: Recv ZFREQCL 15-12-21 22:37:35.326 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:37:35.326 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:35.326 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:37:35.387 -05 000000068 INF: FPGA: Recv TDIYERD 7068853 15-12-21 22:37:35.387 -05 000000062 INF: Before scan, Y encoder from FPGA = 7068853 counts (70.689 mm) 15-12-21 22:37:35.388 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:37:35.389 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:37:35.398 -05 000000024 INF: ===================TDI FPGA Arm=================== 15-12-21 22:37:35.398 -05 000000085 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:37:35.398 -05 000000085 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:37:35.399 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:37:35.404 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:37:35.407 -05 000000024 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:37:35.449 -05 000000080 INF: FPGA: Recv TDIYPOS 15-12-21 22:37:35.450 -05 000000085 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:37:35.451 -05 000000085 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:37:35.451 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:37:35.451 -05 000000085 INF: ====================================== 15-12-21 22:37:35.458 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:37:35.462 -05 000000024 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:37:35.511 -05 000000079 INF: FPGA: Recv TDIYARM3 15-12-21 22:37:35.513 -05 000000024 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:37:35.515 -05 000000024 INF: ===================TDI FPGA Arm=================== 15-12-21 22:37:35.517 -05 000000024 INF: ====================================== 15-12-21 22:37:35.525 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:37:35.527 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:35.527 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:35.528 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:35.533 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:35.537 -05 000000078 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:37:35.537 -05 000000085 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:37:35.537 -05 000000078 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:37:35.538 -05 000000078 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:37:35.538 -05 000000078 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:37:35.538 -05 000000078 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:37:35.538 -05 000000085 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:37:35.538 -05 000000085 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:37:35.538 -05 000000085 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:37:35.543 -05 000000085 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:37:35.579 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:35.579 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 7 of 15 seconds left=================== 15-12-21 22:37:35.580 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:35.638 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 56.111C:A1\r\n 15-12-21 22:37:35.638 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:35.697 -05 000000024 INF: FPGA: Recv EX1MV 15-12-21 22:37:35.697 -05 000000078 INF: Excitation Filter 1: Moved -36 steps in 159.659 ms 15-12-21 22:37:35.697 -05 000000078 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 159.8211 ms 15-12-21 22:37:35.697 -05 000000078 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 159.9228 ms 15-12-21 22:37:35.699 -05 000000078 INF: ====================================== 15-12-21 22:37:36.004 -05 000000029 INF: FPGA: Recv EX2MV 15-12-21 22:37:36.004 -05 000000085 INF: Excitation Filter 2: Moved -107 steps in 466.6188 ms 15-12-21 22:37:36.005 -05 000000085 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 466.8153 ms 15-12-21 22:37:36.005 -05 000000085 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 466.923 ms 15-12-21 22:37:36.006 -05 000000085 INF: ====================================== 15-12-21 22:37:36.009 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:36.011 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:36.017 -05 000000079 INF: ===================FPGA Z Wait=================== 15-12-21 22:37:36.018 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:37:36.018 -05 000000068 INF: ===================Camera TDI=================== 15-12-21 22:37:36.018 -05 000000079 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:37:36.018 -05 000000090 INF: ===================Move Y Motor without settling=================== 15-12-21 22:37:36.019 -05 000000090 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:37:36.019 -05 000000090 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:37:36.019 -05 000000028 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:37:36.020 -05 000000028 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:37:36.020 -05 000000090 INF: Y Motor: Xmit 1G\n 15-12-21 22:37:36.022 -05 000000068 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:37:36.023 -05 000000049 INF: ===================Camera TDI=================== 15-12-21 22:37:36.024 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:37:36.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:36.073 -05 000000090 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:37:36.073 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:36.073 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:36.074 -05 000000090 INF: Y Motor: Recv 1G\r\n 15-12-21 22:37:36.075 -05 000000090 INF: Y Motor: Xmit 1D\n 15-12-21 22:37:36.136 -05 000000090 INF: Y Motor: Recv 1D\r\n 15-12-21 22:37:36.137 -05 000000090 INF: Y Motor: Recv *407662\r\n 15-12-21 22:37:36.138 -05 000000090 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:37:36.235 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:36.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:36.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:36.323 -05 000000029 INF: FPGA: Recv ZWAIT 15-12-21 22:37:36.325 -05 000000079 INF: ====================================== 15-12-21 22:37:36.389 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:36.449 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:36.449 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:36.574 -05 000000049 INF: ===================Frame #3=================== 15-12-21 22:37:36.576 -05 000000024 INF: ===================Frame #3=================== 15-12-21 22:37:36.580 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:36.580 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 6 of 15 seconds left=================== 15-12-21 22:37:36.725 -05 000000049 INF: ===================Frame #20=================== 15-12-21 22:37:36.726 -05 000000024 INF: ===================Frame #20=================== 15-12-21 22:37:36.830 -05 000000038 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2107=================== 15-12-21 22:37:36.875 -05 000000040 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106=================== 15-12-21 22:37:36.875 -05 000000060 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109=================== 15-12-21 22:37:36.973 -05 000000024 INF: ===================Frame #40=================== 15-12-21 22:37:36.973 -05 000000049 INF: ===================Frame #40=================== 15-12-21 22:37:36.976 -05 000000089 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109, Registering and Extracting C040 L002 T2110=================== 15-12-21 22:37:36.993 -05 000000077 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109=================== 15-12-21 22:37:37.044 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:37.074 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.015C:A1\r\n 15-12-21 22:37:37.074 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:37.075 -05 000000075 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109, Registering and Extracting C040 L002 T2111=================== 15-12-21 22:37:37.130 -05 000000051 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109=================== 15-12-21 22:37:37.175 -05 000000071 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109, Registering and Extracting C040 L002 T2112=================== 15-12-21 22:37:37.189 -05 000000048 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109=================== 15-12-21 22:37:37.219 -05 000000024 INF: ===================Frame #59=================== 15-12-21 22:37:37.220 -05 000000049 INF: ===================Frame #59=================== 15-12-21 22:37:37.276 -05 000000094 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109, Registering and Extracting C040 L002 T2113=================== 15-12-21 22:37:37.278 -05 000000027 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109=================== 15-12-21 22:37:37.371 -05 000000024 INF: ===================Frame #71=================== 15-12-21 22:37:37.371 -05 000000049 INF: ===================Frame #71=================== 15-12-21 22:37:37.376 -05 000000065 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109, Registering and Extracting C040 L002 T2114=================== 15-12-21 22:37:37.522 -05 000000024 INF: ===================Frame #83=================== 15-12-21 22:37:37.522 -05 000000049 INF: ===================Frame #83=================== 15-12-21 22:37:37.581 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:37.581 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 5 of 15 seconds left=================== 15-12-21 22:37:37.619 -05 000000066 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109=================== 15-12-21 22:37:37.673 -05 000000024 INF: ===================Frame #95=================== 15-12-21 22:37:37.673 -05 000000049 INF: ===================Frame #95=================== 15-12-21 22:37:37.676 -05 000000009 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109, Registering and Extracting C040 L002 T2115=================== 15-12-21 22:37:37.697 -05 000000011 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109=================== 15-12-21 22:37:37.799 -05 000000074 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109, Registering and Extracting C040 L002 T2116=================== 15-12-21 22:37:37.824 -05 000000049 INF: ===================Frame #107=================== 15-12-21 22:37:37.824 -05 000000024 INF: ===================Frame #107=================== 15-12-21 22:37:37.833 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:37.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:37.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:37.981 -05 000000024 INF: ===================Frame #119=================== 15-12-21 22:37:37.981 -05 000000049 INF: ===================Frame #119=================== 15-12-21 22:37:38.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:38.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:38.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:38.131 -05 000000024 INF: ===================Frame #131=================== 15-12-21 22:37:38.132 -05 000000049 INF: ===================Frame #131=================== 15-12-21 22:37:38.213 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:38.226 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:38.226 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:38.283 -05 000000024 INF: ===================Frame #143=================== 15-12-21 22:37:38.283 -05 000000049 INF: ===================Frame #143=================== 15-12-21 22:37:38.434 -05 000000024 INF: ===================Frame #155=================== 15-12-21 22:37:38.434 -05 000000049 INF: ===================Frame #155=================== 15-12-21 22:37:38.583 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:38.583 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 4 of 15 seconds left=================== 15-12-21 22:37:38.584 -05 000000049 INF: ===================Frame #167=================== 15-12-21 22:37:38.584 -05 000000024 INF: ===================Frame #167=================== 15-12-21 22:37:38.735 -05 000000024 INF: ===================Frame #179=================== 15-12-21 22:37:38.735 -05 000000049 INF: ===================Frame #179=================== 15-12-21 22:37:38.886 -05 000000024 INF: ===================Frame #191=================== 15-12-21 22:37:38.886 -05 000000049 INF: ===================Frame #191=================== 15-12-21 22:37:39.036 -05 000000049 INF: ===================Frame #203=================== 15-12-21 22:37:39.036 -05 000000024 INF: ===================Frame #203=================== 15-12-21 22:37:39.188 -05 000000024 INF: ===================Frame #215=================== 15-12-21 22:37:39.188 -05 000000049 INF: ===================Frame #215=================== 15-12-21 22:37:39.252 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:39.271 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.995C:A1\r\n 15-12-21 22:37:39.271 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:39.339 -05 000000049 INF: ===================Frame #227=================== 15-12-21 22:37:39.339 -05 000000024 INF: ===================Frame #227=================== 15-12-21 22:37:39.491 -05 000000049 INF: ===================Frame #239=================== 15-12-21 22:37:39.491 -05 000000024 INF: ===================Frame #239=================== 15-12-21 22:37:39.584 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:39.584 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 3 of 15 seconds left=================== 15-12-21 22:37:39.600 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:39.641 -05 000000024 INF: ===================Frame #251=================== 15-12-21 22:37:39.641 -05 000000049 INF: ===================Frame #251=================== 15-12-21 22:37:39.662 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:39.662 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:39.764 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:39.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:39.786 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:39.792 -05 000000049 INF: ===================Frame #263=================== 15-12-21 22:37:39.793 -05 000000024 INF: ===================Frame #263=================== 15-12-21 22:37:39.892 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:39.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:39.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:39.943 -05 000000049 INF: ===================Frame #275=================== 15-12-21 22:37:39.943 -05 000000024 INF: ===================Frame #275=================== 15-12-21 22:37:40.095 -05 000000024 INF: ===================Frame #287=================== 15-12-21 22:37:40.095 -05 000000049 INF: ===================Frame #287=================== 15-12-21 22:37:40.245 -05 000000024 INF: ===================Frame #299=================== 15-12-21 22:37:40.245 -05 000000049 INF: ===================Frame #299=================== 15-12-21 22:37:40.397 -05 000000049 INF: ===================Frame #310=================== 15-12-21 22:37:40.397 -05 000000024 INF: ===================Frame #310=================== 15-12-21 22:37:40.584 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:40.585 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 2 of 15 seconds left=================== 15-12-21 22:37:40.796 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:40.849 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 51.437C:A1\r\n 15-12-21 22:37:40.849 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:41.149 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:41.187 -05 000000060 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106, Registering and Extracting C040 L002 T2109=================== 15-12-21 22:37:41.223 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:41.223 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:41.336 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:41.411 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:41.411 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:41.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:41.526 -05 000000049 INF: ===================Frame #400=================== 15-12-21 22:37:41.535 -05 000000024 INF: ===================Frame #401=================== 15-12-21 22:37:41.552 -05 000000089 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105, Registering and Extracting C040 L002 T2106=================== 15-12-21 22:37:41.586 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:41.586 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 1 of 15 seconds left=================== 15-12-21 22:37:41.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:41.596 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:41.685 -05 000000024 INF: ===================Frame #412=================== 15-12-21 22:37:41.870 -05 000000049 INF: ===================Frame #427=================== 15-12-21 22:37:42.020 -05 000000049 INF: ===================Frame #439=================== 15-12-21 22:37:42.068 -05 000000024 INF: ===================Frame #443=================== 15-12-21 22:37:42.171 -05 000000049 INF: ===================Frame #451=================== 15-12-21 22:37:42.178 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:42.218 -05 000000024 INF: ===================Frame #454=================== 15-12-21 22:37:42.221 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.011C:A1\r\n 15-12-21 22:37:42.221 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:42.322 -05 000000049 INF: ===================Frame #463=================== 15-12-21 22:37:42.389 -05 000000075 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104, Registering and Extracting C040 L002 T2105=================== 15-12-21 22:37:42.435 -05 000000024 INF: ===================Frame #472=================== 15-12-21 22:37:42.473 -05 000000049 INF: ===================Frame #475=================== 15-12-21 22:37:42.559 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:42.560 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:42.560 -05 000000057 INF: WaitCommand(15000) end 15-12-21 22:37:42.560 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:37:42.561 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:42.561 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:42.564 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:37:42.565 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:42.628 -05 000000024 INF: ===================Frame #486=================== 15-12-21 22:37:42.635 -05 000000049 INF: ===================Frame #487=================== 15-12-21 22:37:42.656 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:42.656 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Selecting Reagent USM (3)=================== 15-12-21 22:37:42.656 -05 000000057 INF: Valve A2: Go to position 3 15-12-21 22:37:42.656 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:37:42.718 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 5\r 15-12-21 22:37:42.718 -05 000000057 INF: Valve A2: 49.358 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:37:42.718 -05 000000057 INF: Valve A2: Taking shortest path 'CC' from 5 to 3 15-12-21 22:37:42.718 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CC3\r 15-12-21 22:37:42.718 -05 000000057 INF: SerialPort A2 (VICIA2): Recv (discarded) 15-12-21 22:37:42.718 -05 000000057 INF: SerialPort A2 (VICIA2): Xmit CP\r 15-12-21 22:37:42.809 -05 000000049 INF: ===================Frame #501=================== 15-12-21 22:37:42.813 -05 000000024 INF: ===================Frame #502=================== 15-12-21 22:37:43.034 -05 000000049 INF: ===================Frame #516=================== 15-12-21 22:37:43.072 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:43.098 -05 000000071 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103, Registering and Extracting C040 L002 T2104=================== 15-12-21 22:37:43.125 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:43.125 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:43.173 -05 000000094 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102, Registering and Extracting C040 L002 T2103=================== 15-12-21 22:37:43.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:43.239 -05 000000024 INF: ===================Frame #535=================== 15-12-21 22:37:43.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:43.249 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:43.250 -05 000000065 INF: ===================Registering and Extracting C040 L002 T2101, Registering and Extracting C040 L002 T2102=================== 15-12-21 22:37:43.291 -05 000000074 INF: ===================Registering and Extracting C040 L002 T2101=================== 15-12-21 22:37:43.293 -05 000000009 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:37:43.312 -05 000000057 INF: SerialPort A2 (VICIA2): Recv Position is = 3\r 15-12-21 22:37:43.312 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:43.312 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:37:43.351 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:37:43.374 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:37:43.374 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:43.384 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:43.389 -05 000000024 INF: ===================Frame #547=================== 15-12-21 22:37:43.390 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:37:43.434 -05 000000049 INF: ===================Frame #551=================== 15-12-21 22:37:43.477 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:43.501 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:43.501 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:43.540 -05 000000024 INF: ===================Frame #559=================== 15-12-21 22:37:43.567 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:43.572 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:37:43.585 -05 000000049 INF: ===================Frame #563=================== 15-12-21 22:37:43.600 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:1\r 15-12-21 22:37:43.624 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:37:43.624 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:43.684 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:43.690 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:37:43.691 -05 000000024 INF: ===================Frame #571=================== 15-12-21 22:37:43.729 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:37:43.735 -05 000000049 INF: ===================Frame #574=================== 15-12-21 22:37:43.749 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:37:43.749 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:43.808 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:43.821 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:37:43.843 -05 000000024 INF: ===================Frame #583=================== 15-12-21 22:37:43.854 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:43.855 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:37:43.855 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:43.932 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:43.936 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:43.946 -05 000000057 INF: KloehnPump A (KLOEHNA): Pumping from 3, aspirate port PortB, aspiration rate 750, dispense rate 2500, volume 75, calling command "Pumping to Flowcell #1 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:37:43.994 -05 000000024 INF: ===================Frame #595=================== 15-12-21 22:37:43.997 -05 000000049 INF: ===================Frame #595=================== 15-12-21 22:37:44.037 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:37:44.123 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 22:37:44.123 -05 000000057 INF: Current Position of Pump is: 23040 15-12-21 22:37:44.124 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB=================== 15-12-21 22:37:44.145 -05 000000024 INF: ===================Frame #607=================== 15-12-21 22:37:44.147 -05 000000049 INF: ===================Frame #607=================== 15-12-21 22:37:44.224 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V2400s231P14400R\r 15-12-21 22:37:44.295 -05 000000024 INF: ===================Frame #619=================== 15-12-21 22:37:44.297 -05 000000049 INF: ===================Frame #619=================== 15-12-21 22:37:44.310 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:44.390 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:44.410 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:44.435 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.008C:A1\r\n 15-12-21 22:37:44.435 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:44.446 -05 000000024 INF: ===================Frame #631=================== 15-12-21 22:37:44.447 -05 000000049 INF: ===================Frame #631=================== 15-12-21 22:37:44.497 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:44.598 -05 000000049 INF: ===================Frame #643=================== 15-12-21 22:37:44.598 -05 000000024 INF: ===================Frame #643=================== 15-12-21 22:37:44.724 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:44.747 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:44.747 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:44.747 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:44.749 -05 000000024 INF: ===================Frame #655=================== 15-12-21 22:37:44.749 -05 000000049 INF: ===================Frame #655=================== 15-12-21 22:37:44.808 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:44.855 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:44.874 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:44.874 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:44.900 -05 000000049 INF: ===================Frame #666=================== 15-12-21 22:37:44.900 -05 000000024 INF: ===================Frame #666=================== 15-12-21 22:37:44.980 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:44.996 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:44.996 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:45.058 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:45.068 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:37:45.121 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:45.348 -05 000000049 INF: ===================Frame #702=================== 15-12-21 22:37:45.371 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:45.433 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:45.435 -05 000000024 INF: ===================Frame #709=================== 15-12-21 22:37:45.539 -05 000000049 INF: ===================Frame #717=================== 15-12-21 22:37:45.585 -05 000000024 INF: ===================Frame #721=================== 15-12-21 22:37:45.683 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:45.690 -05 000000049 INF: ===================Frame #729=================== 15-12-21 22:37:45.738 -05 000000024 INF: ===================Frame #733=================== 15-12-21 22:37:45.746 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:45.840 -05 000000049 INF: ===================Frame #741=================== 15-12-21 22:37:45.889 -05 000000024 INF: ===================Frame #745=================== 15-12-21 22:37:45.958 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:45.991 -05 000000049 INF: ===================Frame #753=================== 15-12-21 22:37:45.996 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:45.996 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 47.228C:A1\r\n 15-12-21 22:37:45.996 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:46.040 -05 000000024 INF: ===================Frame #757=================== 15-12-21 22:37:46.057 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:46.142 -05 000000049 INF: ===================Frame #765=================== 15-12-21 22:37:46.190 -05 000000024 INF: ===================Frame #769=================== 15-12-21 22:37:46.221 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:46.244 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:46.244 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:46.295 -05 000000049 INF: ===================Frame #777=================== 15-12-21 22:37:46.307 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:46.340 -05 000000024 INF: ===================Frame #780=================== 15-12-21 22:37:46.347 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:46.369 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:46.370 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:46.370 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:46.446 -05 000000049 INF: ===================Frame #789=================== 15-12-21 22:37:46.477 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:46.496 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:46.496 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:46.596 -05 000000049 INF: ===================Frame #801=================== 15-12-21 22:37:46.619 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:46.642 -05 000000024 INF: ===================Frame #804=================== 15-12-21 22:37:46.684 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:46.746 -05 000000049 INF: ===================Frame #813=================== 15-12-21 22:37:46.826 -05 000000024 INF: ===================Frame #819=================== 15-12-21 22:37:46.897 -05 000000049 INF: ===================Frame #824=================== 15-12-21 22:37:46.934 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:46.977 -05 000000024 INF: ===================Frame #831=================== 15-12-21 22:37:46.993 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:47.127 -05 000000024 INF: ===================Frame #843=================== 15-12-21 22:37:47.223 -05 000000049 INF: ===================Frame #850=================== 15-12-21 22:37:47.243 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:47.278 -05 000000024 INF: ===================Frame #855=================== 15-12-21 22:37:47.304 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:47.328 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:47.370 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.013C:A1\r\n 15-12-21 22:37:47.370 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:47.422 -05 000000049 INF: ===================Frame #866=================== 15-12-21 22:37:47.428 -05 000000024 INF: ===================Frame #866=================== 15-12-21 22:37:47.555 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:47.611 -05 000000049 INF: ===================Frame #881=================== 15-12-21 22:37:47.616 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:47.681 -05 000000024 INF: ===================Frame #886=================== 15-12-21 22:37:47.720 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:47.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:47.743 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:47.761 -05 000000049 INF: ===================Frame #893=================== 15-12-21 22:37:47.844 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:47.866 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:47.870 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:47.870 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:47.878 -05 000000024 INF: ===================Frame #902=================== 15-12-21 22:37:47.911 -05 000000049 INF: ===================Frame #905=================== 15-12-21 22:37:47.929 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:47.969 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:47.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:47.992 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:48.062 -05 000000049 INF: ===================Frame #917=================== 15-12-21 22:37:48.066 -05 000000024 INF: ===================Frame #917=================== 15-12-21 22:37:48.179 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:48.212 -05 000000049 INF: ===================Frame #928=================== 15-12-21 22:37:48.216 -05 000000024 INF: ===================Frame #929=================== 15-12-21 22:37:48.240 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:48.366 -05 000000024 INF: ===================Frame #941=================== 15-12-21 22:37:48.449 -05 000000049 INF: ===================Frame #947=================== 15-12-21 22:37:48.490 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:48.516 -05 000000024 INF: ===================Frame #952=================== 15-12-21 22:37:48.553 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:48.599 -05 000000049 INF: ===================Frame #959=================== 15-12-21 22:37:48.723 -05 000000024 INF: ===================Frame #969=================== 15-12-21 22:37:48.749 -05 000000049 INF: ===================Frame #971=================== 15-12-21 22:37:48.803 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:48.864 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:48.873 -05 000000024 INF: ===================Frame #981=================== 15-12-21 22:37:48.899 -05 000000049 INF: ===================Frame #983=================== 15-12-21 22:37:49.024 -05 000000024 INF: ===================Frame #993=================== 15-12-21 22:37:49.049 -05 000000049 INF: ===================Frame #995=================== 15-12-21 22:37:49.114 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:49.174 -05 000000024 INF: ===================Frame #1004=================== 15-12-21 22:37:49.177 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:49.200 -05 000000049 INF: ===================Frame #1006=================== 15-12-21 22:37:49.222 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:49.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:49.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:49.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:49.425 -05 000000024 INF: ===================Frame #1024=================== 15-12-21 22:37:49.427 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:49.430 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:49.431 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:49.478 -05 000000049 INF: ===================Frame #1029=================== 15-12-21 22:37:49.488 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:49.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:49.554 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:49.554 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:49.606 -05 000000024 INF: ===================Frame #1038=================== 15-12-21 22:37:49.628 -05 000000049 INF: ===================Frame #1040=================== 15-12-21 22:37:49.659 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:49.679 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.980C:A1\r\n 15-12-21 22:37:49.679 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:49.738 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:49.773 -05 000000024 INF: ===================Frame #1052=================== 15-12-21 22:37:49.802 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:49.818 -05 000000049 INF: ===================Frame #1055=================== 15-12-21 22:37:49.946 -05 000000024 INF: ===================Frame #1066=================== 15-12-21 22:37:49.968 -05 000000049 INF: ===================Frame #1067=================== 15-12-21 22:37:50.052 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:50.112 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:50.118 -05 000000049 INF: ===================Frame #1079=================== 15-12-21 22:37:50.119 -05 000000024 INF: ===================Frame #1079=================== 15-12-21 22:37:50.268 -05 000000049 INF: ===================Frame #1091=================== 15-12-21 22:37:50.269 -05 000000024 INF: ===================Frame #1091=================== 15-12-21 22:37:50.362 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:50.420 -05 000000049 INF: ===================Frame #1103=================== 15-12-21 22:37:50.420 -05 000000024 INF: ===================Frame #1103=================== 15-12-21 22:37:50.426 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:50.571 -05 000000024 INF: ===================Frame #1115=================== 15-12-21 22:37:50.571 -05 000000049 INF: ===================Frame #1115=================== 15-12-21 22:37:50.676 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:50.722 -05 000000049 INF: ===================Frame #1127=================== 15-12-21 22:37:50.722 -05 000000024 INF: ===================Frame #1127=================== 15-12-21 22:37:50.737 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:50.779 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:50.800 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:50.800 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:50.873 -05 000000024 INF: ===================Frame #1139=================== 15-12-21 22:37:50.873 -05 000000049 INF: ===================Frame #1139=================== 15-12-21 22:37:50.901 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:50.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:50.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:50.989 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:51.024 -05 000000024 INF: ===================Frame #1151=================== 15-12-21 22:37:51.024 -05 000000049 INF: ===================Frame #1151=================== 15-12-21 22:37:51.029 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:51.048 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:51.048 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:37:51.049 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:51.049 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:51.148 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:37:51.152 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:51.174 -05 000000024 INF: ===================Frame #1163=================== 15-12-21 22:37:51.175 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 43.145C:A1\r\n 15-12-21 22:37:51.175 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:51.175 -05 000000049 INF: ===================Frame #1163=================== 15-12-21 22:37:51.236 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 22:37:51.236 -05 000000057 INF: Current Position of Pump is: 37440 15-12-21 22:37:51.236 -05 000000057 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:37:51.326 -05 000000049 INF: ===================Frame #1175=================== 15-12-21 22:37:51.326 -05 000000024 INF: ===================Frame #1175=================== 15-12-21 22:37:51.336 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:37:51.424 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:51.477 -05 000000024 INF: ===================Frame #1186=================== 15-12-21 22:37:51.477 -05 000000049 INF: ===================Frame #1186=================== 15-12-21 22:37:51.524 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:51.613 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:51.843 -05 000000024 INF: ===================Frame #1216=================== 15-12-21 22:37:51.863 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:51.870 -05 000000049 INF: ===================Frame #1218=================== 15-12-21 22:37:51.923 -05 000000057 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:51.923 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:51.924 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:37:51.924 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:37:51.986 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:37:51.986 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:52.026 -05 000000024 INF: ===================Frame #1230=================== 15-12-21 22:37:52.057 -05 000000049 INF: ===================Frame #1232=================== 15-12-21 22:37:52.088 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:0:0\r 15-12-21 22:37:52.112 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:37:52.112 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:52.190 -05 000000024 INF: ===================Frame #1243=================== 15-12-21 22:37:52.222 -05 000000049 INF: ===================Frame #1245=================== 15-12-21 22:37:52.280 -05 000000085 INF: FPGA: Recv TDIYWAIT 15-12-21 22:37:52.280 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:37:52.282 -05 000000028 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:37:52.284 -05 000000023 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:37:52.284 -05 000000029 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:37:52.284 -05 000000023 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:37:52.284 -05 000000023 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:37:52.284 -05 000000023 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:37:52.287 -05 000000023 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:37:52.287 -05 000000029 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:37:52.287 -05 000000029 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:37:52.287 -05 000000029 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:37:52.290 -05 000000029 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:37:52.340 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:0\r 15-12-21 22:37:52.340 -05 000000024 INF: ===================Frame #1250=================== 15-12-21 22:37:52.362 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:37:52.362 -05 000000057 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:52.362 -05 000000024 INF: Camera complete - got 1250 frames. 15-12-21 22:37:52.363 -05 000000024 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:37:52.463 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:52.464 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:52.464 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:52.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:52.465 -05 000000057 INF: WaitCommand(5000) start 15-12-21 22:37:52.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 22:37:52.468 -05 000000081 INF: FPGA: Recv EX1MV 15-12-21 22:37:52.468 -05 000000023 INF: Excitation Filter 1: Moved 36 steps in 184.1559 ms 15-12-21 22:37:52.470 -05 000000023 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 186.4211 ms 15-12-21 22:37:52.470 -05 000000023 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 186.4985 ms 15-12-21 22:37:52.471 -05 000000023 INF: ====================================== 15-12-21 22:37:52.484 -05 000000049 INF: ===================Frame #1250=================== 15-12-21 22:37:52.484 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:37:52.485 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:52.485 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:52.507 -05 000000049 INF: Camera complete - got 1250 frames. 15-12-21 22:37:52.509 -05 000000049 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:37:52.518 -05 000000024 INF: ====================================== 15-12-21 22:37:52.589 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:52.611 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.013C:A1\r\n 15-12-21 22:37:52.611 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:52.629 -05 000000049 INF: ===================Camera TDI=================== 15-12-21 22:37:52.649 -05 000000049 INF: ====================================== 15-12-21 22:37:52.650 -05 000000068 INF: ===================Camera TDI=================== 15-12-21 22:37:52.656 -05 000000079 INF: FPGA: Recv EX2MV 15-12-21 22:37:52.656 -05 000000068 INF: ====================================== 15-12-21 22:37:52.656 -05 000000029 INF: Excitation Filter 2: Moved 107 steps in 369.1578 ms 15-12-21 22:37:52.656 -05 000000029 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 369.2379 ms 15-12-21 22:37:52.656 -05 000000029 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 369.3607 ms 15-12-21 22:37:52.657 -05 000000029 INF: ====================================== 15-12-21 22:37:52.665 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:37:52.693 -05 000000028 INF: ====================================== 15-12-21 22:37:52.764 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:52.856 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:52.856 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:52.967 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:53.033 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:53.033 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:53.039 -05 000000090 INF: Y Motor: Moved to 9.0765 after 16902 ms 15-12-21 22:37:53.040 -05 000000090 INF: ====================================== 15-12-21 22:37:53.044 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:53.047 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:37:53.049 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.050 -05 000000062 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:37:53.091 -05 000000029 INF: FPGA: Recv TDICLINES 9942 15-12-21 22:37:53.091 -05 000000062 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:37:53.178 -05 000000081 INF: FPGA: Recv TDIYERD 907647 15-12-21 22:37:53.178 -05 000000062 INF: FPGA: Xmit ZADCR\n 15-12-21 22:37:53.231 -05 000000056 INF: FPGA: Recv ZADCR 24044 15-12-21 22:37:53.231 -05 000000062 INF: At scan end Y pos = 9.076 and Z pos = -0.092. Y moved -60.304 mm 15-12-21 22:37:53.232 -05 000000062 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:37:53.293 -05 000000049 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:37:53.293 -05 000000062 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:37:53.293 -05 000000062 INF: TDIScan finished after 21807.7045 ms 15-12-21 22:37:53.294 -05 000000062 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:37:53.294 -05 000000062 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:37:53.300 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.329 -05 000000062 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.035 um 15-12-21 22:37:53.330 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.333 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.340 -05 000000056 INF: ===================Dither Clean Up Command=================== 15-12-21 22:37:53.340 -05 000000028 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:37:53.340 -05 000000029 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:37:53.340 -05 000000090 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:37:53.344 -05 000000029 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:37:53.344 -05 000000029 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:37:53.346 -05 000000090 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:37:53.347 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:53.347 -05 000000023 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:37:53.351 -05 000000023 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:37:53.351 -05 000000080 INF: ===================LFT:Extracting coords=================== 15-12-21 22:37:53.358 -05 000000081 INF: FPGA: Recv ZSTEP 15-12-21 22:37:53.358 -05 000000029 INF: ====================================== 15-12-21 22:37:53.386 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:53.392 -05 000000080 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:37:53.395 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:53.395 -05 000000079 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:53.395 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:53.395 -05 000000049 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:53.396 -05 000000079 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:53.396 -05 000000049 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:53.404 -05 000000055 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:53.404 -05 000000024 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:37:53.420 -05 000000029 INF: FPGA: Recv ZSEL 15-12-21 22:37:53.420 -05 000000023 INF: FPGA: Xmit ZDACW 31083\n 15-12-21 22:37:53.421 -05 000000090 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:37:53.422 -05 000000028 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:37:53.422 -05 000000090 INF: ====================================== 15-12-21 22:37:53.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:53.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:37:53.482 -05 000000081 INF: FPGA: Recv ZDACW 15-12-21 22:37:53.482 -05 000000023 INF: ====================================== 15-12-21 22:37:53.483 -05 000000028 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:37:53.484 -05 000000028 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:37:53.489 -05 000000028 INF: ====================================== 15-12-21 22:37:53.571 -05 000000079 INF: LFT found best fwhm score 2.496975 in 129 ms 15-12-21 22:37:53.571 -05 000000079 INF: LFT found good score at index 2577 with fwhm value 2.496975. Next cycle, cycle 41 starting Z position for bottom surface is at -0.099 mm FC:B, C:40,L:2,B 15-12-21 22:37:53.571 -05 000000079 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:53.571 -05 000000079 INF: ====================================== 15-12-21 22:37:53.578 -05 000000055 INF: LFT found best fwhm score 2.415059 in 134 ms 15-12-21 22:37:53.578 -05 000000055 INF: LFT found good score at index 1657 with fwhm value 2.415059. Next cycle, cycle 41 starting Z position for bottom surface is at -0.100 mm FC:B, C:40,L:2,B 15-12-21 22:37:53.578 -05 000000055 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:53.579 -05 000000055 INF: ====================================== 15-12-21 22:37:53.634 -05 000000049 INF: LFT found best fwhm score 2.539035 in 193 ms 15-12-21 22:37:53.634 -05 000000049 INF: LFT found good score at index 7897 with fwhm value 2.539035. Next cycle, cycle 41 starting Z position for bottom surface is at -0.098 mm FC:B, C:40,L:2,B 15-12-21 22:37:53.635 -05 000000049 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:53.635 -05 000000049 INF: ====================================== 15-12-21 22:37:53.636 -05 000000024 INF: LFT found best fwhm score 2.326479 in 194 ms 15-12-21 22:37:53.636 -05 000000024 INF: LFT found good score at index 4093 with fwhm value 2.326479. Next cycle, cycle 41 starting Z position for bottom surface is at -0.099 mm FC:B, C:40,L:2,B 15-12-21 22:37:53.637 -05 000000024 INF: ===================LookupFocusTracking=================== 15-12-21 22:37:53.637 -05 000000024 INF: ====================================== 15-12-21 22:37:53.643 -05 000000080 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:37:53.645 -05 000000080 INF: LFT weighted average best Z for bottom surface is at -0.099mm FC:B, C:40,L:2,B 15-12-21 22:37:53.648 -05 000000080 INF: ====================================== 15-12-21 22:37:53.651 -05 000000056 INF: ====================================== 15-12-21 22:37:53.656 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.657 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:37:53.659 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.660 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:37:53.660 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.660 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:37:53.660 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.660 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:37:53.661 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:37:53.661 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:37:53.661 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:37:53.663 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left, Waiting for image analysis=================== 15-12-21 22:37:53.663 -05 000000062 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:37:53.663 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:37:53.663 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 81.02901 Y = 39.38=================== 15-12-21 22:37:53.664 -05 000000062 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 15-12-21 22:37:53.665 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:53.666 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:37:53.666 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:53.667 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:37:53.667 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:37:53.668 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging, Bottom Surface=================== 15-12-21 22:37:53.668 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:37:53.669 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:37:53.672 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:37:53.675 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40, Imaging=================== 15-12-21 22:37:53.678 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #40=================== 15-12-21 22:37:53.680 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX)=================== 15-12-21 22:37:53.956 -05 000000074 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203=================== 15-12-21 22:37:53.956 -05 000000094 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204=================== 15-12-21 22:37:53.957 -05 000000009 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203=================== 15-12-21 22:37:53.957 -05 000000071 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205=================== 15-12-21 22:37:53.957 -05 000000075 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206=================== 15-12-21 22:37:53.957 -05 000000089 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2207=================== 15-12-21 22:37:53.958 -05 000000060 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2207, Registering and Extracting C040 L002 T2208=================== 15-12-21 22:37:53.959 -05 000000065 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203=================== 15-12-21 22:37:54.009 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41=================== 15-12-21 22:37:54.010 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle=================== 15-12-21 22:37:54.010 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:54.011 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:54.012 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:54.119 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:54.166 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:54.166 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Selecting Reagent USB (5)=================== 15-12-21 22:37:54.167 -05 000000062 INF: Valve B2: Go to position 5 15-12-21 22:37:54.167 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:37:54.216 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 3\r 15-12-21 22:37:54.216 -05 000000062 INF: Valve B2: 208.728 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:37:54.216 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 3 to 5 15-12-21 22:37:54.216 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW5\r 15-12-21 22:37:54.217 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:37:54.217 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:37:54.357 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:54.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:54.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:54.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:54.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 22:37:54.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:54.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:54.623 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:54.742 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:54.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:54.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:54.863 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 22:37:54.863 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:54.864 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:37:54.964 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:37:55.043 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.984C:A1\r\n 15-12-21 22:37:55.043 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:55.150 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:37:55.168 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:37:55.168 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:55.326 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:37:55.372 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:37:55.372 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:55.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:55.465 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 22:37:55.483 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:37:55.496 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:37:55.496 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:55.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:55.635 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 22:37:55.635 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:55.698 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:55.769 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 40, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:37:55.799 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:37:55.886 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:37:55.886 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 22:37:55.887 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:37:55.986 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P7680R\r 15-12-21 22:37:56.074 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:56.114 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:56.136 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:56.136 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:56.174 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:56.241 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:56.260 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:56.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:56.261 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:56.372 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:37:56.446 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 39.319C:A1\r\n 15-12-21 22:37:56.446 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:56.466 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:56.467 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 22:37:56.510 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:56.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:56.570 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:56.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:56.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:56.820 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:56.882 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:57.132 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:57.195 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:57.445 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:57.467 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:57.467 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:57.467 -05 000000057 INF: WaitCommand(5000) end 15-12-21 22:37:57.468 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:57.469 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:57.471 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:37:57.473 -05 000000078 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:37:57.473 -05 000000056 INF: ===================WaitCommand=================== 15-12-21 22:37:57.474 -05 000000056 INF: WaitCommand(10000) start 15-12-21 22:37:57.474 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:57.475 -05 000000056 INF: ===================Delay 10 of 10 seconds left=================== 15-12-21 22:37:57.517 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:57.519 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:57.622 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:57.671 -05 000000071 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2207=================== 15-12-21 22:37:57.727 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:57.765 -05 000000011 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2207, Registering and Extracting C040 L002 T2209=================== 15-12-21 22:37:57.772 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:57.828 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1?\r 15-12-21 22:37:57.841 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:37:57.851 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:57.922 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 22:37:57.922 -05 000000078 INF: Current Position of Pump is: 37440 15-12-21 22:37:57.922 -05 000000078 INF: Dispense Steps 48000 is greater than steps to home syringe 37440, reducing number of steps to 37440 15-12-21 22:37:57.923 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.015C:A1\r\n 15-12-21 22:37:57.923 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:57.923 -05 000000078 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:37:58.022 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1V8000OD37440R\r 15-12-21 22:37:58.023 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:37:58.027 -05 000000094 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2207=================== 15-12-21 22:37:58.047 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:37:58.047 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:58.047 -05 000000065 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206=================== 15-12-21 22:37:58.066 -05 000000066 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210=================== 15-12-21 22:37:58.066 -05 000000038 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210, Registering and Extracting C040 L002 T2211=================== 15-12-21 22:37:58.099 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:58.100 -05 000000075 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210=================== 15-12-21 22:37:58.101 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:58.158 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:37:58.161 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:58.161 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent USB (5)=================== 15-12-21 22:37:58.167 -05 000000077 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210, Registering and Extracting C040 L002 T2212=================== 15-12-21 22:37:58.199 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:58.234 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:58.235 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:58.235 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:58.261 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:37:58.336 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:37:58.349 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 22:37:58.349 -05 000000062 INF: Current Position of Pump is: 7680 15-12-21 22:37:58.349 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:37:58.411 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:37:58.411 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:58.449 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:37:58.475 -05 000000056 INF: ===================Delay 9 of 10 seconds left=================== 15-12-21 22:37:58.484 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:58.518 -05 000000074 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210=================== 15-12-21 22:37:58.536 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:58.536 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:58.567 -05 000000040 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210, Registering and Extracting C040 L002 T2213=================== 15-12-21 22:37:58.583 -05 000000009 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210=================== 15-12-21 22:37:58.636 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:58.660 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:58.666 -05 000000051 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210, Registering and Extracting C040 L002 T2214=================== 15-12-21 22:37:58.786 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:58.795 -05 000000089 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2210=================== 15-12-21 22:37:58.831 -05 000000060 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206=================== 15-12-21 22:37:58.847 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:58.868 -05 000000027 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2215=================== 15-12-21 22:37:58.870 -05 000000048 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2215, Registering and Extracting C040 L002 T2216=================== 15-12-21 22:37:58.910 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:37:58.977 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:37:58.977 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:58.978 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:37:58.978 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:37:59.057 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:37:59.057 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:59.097 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:59.176 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:37:59.179 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:59.238 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:37:59.244 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:59.348 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:37:59.427 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:37:59.427 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:37:59.429 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:59.475 -05 000000056 INF: ===================Delay 8 of 10 seconds left=================== 15-12-21 22:37:59.500 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:59.552 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:59.553 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:59.554 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:37:59.566 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:37:59.568 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:37:59.569 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°, FC temperature to 60°=================== 15-12-21 22:37:59.831 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:37:59.851 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:60.00\r 15-12-21 22:37:59.943 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:37:59.948 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:37:59.948 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:00.051 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:00.097 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:00.097 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:00.195 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:00.247 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 22:38:00.253 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:00.316 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:38:00.316 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:00.415 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:00.416 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:38:00.417 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:38:00.419 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:38:00.424 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Flowcell Temp 60°=================== 15-12-21 22:38:00.425 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:00.429 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:00.434 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:38:00.490 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:00.490 -05 000000056 INF: ===================Delay 7 of 10 seconds left=================== 15-12-21 22:38:00.492 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.208C:A1\r\n 15-12-21 22:38:00.492 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:00.503 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:00.572 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:00.572 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Selecting Reagent CRM (7)=================== 15-12-21 22:38:00.572 -05 000000062 INF: Valve B2: Go to position 7 15-12-21 22:38:00.572 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:38:00.573 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:00.618 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:00.626 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 22:38:00.626 -05 000000062 INF: Valve B2: 6.410 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:38:00.626 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 5 to 7 15-12-21 22:38:00.626 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW7\r 15-12-21 22:38:00.627 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:38:00.627 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:38:00.689 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:00.689 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:00.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:00.814 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:00.814 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:00.823 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:00.940 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:01.187 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 7\r 15-12-21 22:38:01.187 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:01.187 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:38:01.187 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:01.190 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:01.252 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:01.253 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:38:01.253 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:01.346 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:38:01.377 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:38:01.377 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:01.472 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:01.490 -05 000000056 INF: ===================Delay 6 of 10 seconds left=================== 15-12-21 22:38:01.501 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:38:01.501 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:01.502 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:01.620 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:01.621 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:01.622 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 22:38:01.625 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:01.672 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:01.691 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 35.909C:A1\r\n 15-12-21 22:38:01.691 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:01.709 -05 000000011 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206, Registering and Extracting C040 L002 T2215=================== 15-12-21 22:38:01.749 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:01.769 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 7, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:38:01.849 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:38:01.875 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:01.936 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`7680 (0x03)\r\n(0xFF) 15-12-21 22:38:01.936 -05 000000062 INF: Current Position of Pump is: 7680 15-12-21 22:38:01.936 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:01.937 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7), Aspirating port PortB=================== 15-12-21 22:38:02.036 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P21120R\r 15-12-21 22:38:02.112 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:02.127 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:02.186 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:02.188 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:02.188 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:02.227 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:02.249 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:02.279 -05 000000066 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205, Registering and Extracting C040 L002 T2206=================== 15-12-21 22:38:02.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:02.310 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:02.311 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:02.311 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:02.323 -05 000000077 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204, Registering and Extracting C040 L002 T2205=================== 15-12-21 22:38:02.356 -05 000000038 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203, Registering and Extracting C040 L002 T2204=================== 15-12-21 22:38:02.424 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:02.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:02.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:02.491 -05 000000056 INF: ===================Delay 5 of 10 seconds left=================== 15-12-21 22:38:02.499 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:02.560 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:02.560 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:02.625 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:02.810 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:02.873 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:02.875 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:02.934 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:02.998 -05 000000051 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202, Registering and Extracting C040 L002 T2203=================== 15-12-21 22:38:03.019 -05 000000040 INF: ===================Registering and Extracting C040 L002 T2201, Registering and Extracting C040 L002 T2202=================== 15-12-21 22:38:03.023 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:03.061 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.009C:A1\r\n 15-12-21 22:38:03.061 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:03.123 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:03.156 -05 000000027 INF: ===================Registering and Extracting C040 L002 T2201=================== 15-12-21 22:38:03.184 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:03.186 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:03.186 -05 000000078 INF: ===================Dispensing Flowcell #1 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:38:03.187 -05 000000078 INF: KloehnPump A (KLOEHNA): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:38:03.202 -05 000000048 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:38:03.235 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:38:03.241 -05 000000026 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:38:03.248 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:03.286 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1IR\r 15-12-21 22:38:03.359 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:38:03.367 -05 000000026 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:38:03.372 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:03.472 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:03.480 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:38:03.489 -05 000000026 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:38:03.492 -05 000000056 INF: ===================Delay 4 of 10 seconds left=================== 15-12-21 22:38:03.496 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:03.498 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:03.558 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:03.599 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:38:03.607 -05 000000026 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:38:03.687 -05 000000026 INF: ===================Image Analysis Flow Cell B 01, ImageProcessing=================== 15-12-21 22:38:03.718 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:03.746 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Xmit /1\r 15-12-21 22:38:03.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:03.749 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:03.808 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:03.808 -05 000000078 INF: KloehnSerialPort A (KLOEHNA): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:03.809 -05 000000078 INF: ====================================== 15-12-21 22:38:03.848 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:03.871 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:03.872 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:03.872 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:04.039 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:04.124 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:04.144 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:04.162 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:04.217 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:04.467 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:04.492 -05 000000056 INF: ===================Delay 3 of 10 seconds left=================== 15-12-21 22:38:04.526 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:04.776 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:04.840 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:04.914 -05 000000026 INF: ===================Image Analysis Flow Cell B 01=================== 15-12-21 22:38:05.090 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:05.151 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:05.401 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:05.440 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:05.464 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:05.464 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:05.464 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:05.493 -05 000000056 INF: ===================Delay 2 of 10 seconds left=================== 15-12-21 22:38:05.566 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:05.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:05.590 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:05.690 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:05.712 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 28.539C:A1\r\n 15-12-21 22:38:05.712 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:05.714 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:05.775 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:05.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:05.838 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:05.838 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:06.045 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:06.085 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:06.335 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:06.397 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:06.494 -05 000000056 INF: ===================Delay 1 of 10 seconds left=================== 15-12-21 22:38:06.647 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:06.709 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:06.802 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:06.836 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 32.808C:A1\r\n 15-12-21 22:38:06.836 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:06.959 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:07.023 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:07.060 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:07.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:07.086 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:07.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:07.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:07.211 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:07.273 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:07.313 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:07.335 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:07.336 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:07.336 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:07.474 -05 000000056 INF: ===================WaitCommand=================== 15-12-21 22:38:07.475 -05 000000056 INF: WaitCommand(10000) end 15-12-21 22:38:07.475 -05 000000056 INF: ====================================== 15-12-21 22:38:07.477 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:38:07.479 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:38:07.480 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:38:07.480 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Chemistry CompleteCycle=================== 15-12-21 22:38:07.481 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44=================== 15-12-21 22:38:07.606 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:07.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Waiting for imaging module...=================== 15-12-21 22:38:07.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Waiting for analysis...=================== 15-12-21 22:38:07.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Waiting for user to shut the door...=================== 15-12-21 22:38:07.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.684 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.684 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Waiting for imaging module...=================== 15-12-21 22:38:07.684 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.684 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Waiting for analysis...=================== 15-12-21 22:38:07.685 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.685 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Waiting for user to shut the door...=================== 15-12-21 22:38:07.685 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.686 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.687 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:38:07.688 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface=================== 15-12-21 22:38:07.688 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface=================== 15-12-21 22:38:07.689 -05 000000057 INF: Compensator: Moving IntoPath 15-12-21 22:38:07.689 -05 000000057 INF: FPGA: Xmit MIOCOMPF\n 15-12-21 22:38:07.709 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:07.959 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:08.020 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:08.067 -05 000000081 INF: FPGA: Recv MIOCOMPF 15-12-21 22:38:08.067 -05 000000057 INF: Compensator: Moved IntoPath in 378 ms 15-12-21 22:38:08.068 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface=================== 15-12-21 22:38:08.071 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface=================== 15-12-21 22:38:08.071 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Aligning=================== 15-12-21 22:38:08.072 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Aligning=================== 15-12-21 22:38:08.072 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Aligning=================== 15-12-21 22:38:08.076 -05 000000085 INF: ===================Move Tilt Motor 1=================== 15-12-21 22:38:08.076 -05 000000049 INF: ===================Move Tilt Motor 2=================== 15-12-21 22:38:08.076 -05 000000085 INF: Tilt Motor 1: Moving to 5.5260 mm, started at 5.3614 mm, delta = 0.1646 mm 15-12-21 22:38:08.076 -05 000000085 INF: FPGA: Xmit T1RD\n 15-12-21 22:38:08.076 -05 000000049 INF: Tilt Motor 2: Moving to 5.3736 mm, started at 5.5075 mm, delta = -0.1339 mm 15-12-21 22:38:08.077 -05 000000090 INF: ===================Move Tilt Motor 3=================== 15-12-21 22:38:08.077 -05 000000090 INF: Tilt Motor 3: Moving to 5.4099 mm, started at 5.5743 mm, delta = -0.1643 mm 15-12-21 22:38:08.083 -05 000000049 INF: FPGA: Xmit T2RD\n 15-12-21 22:38:08.085 -05 000000090 INF: FPGA: Xmit T3RD\n 15-12-21 22:38:08.129 -05 000000081 INF: FPGA: Recv T1RD 21108 15-12-21 22:38:08.129 -05 000000081 INF: FPGA: Recv T2RD 21683 15-12-21 22:38:08.129 -05 000000081 INF: FPGA: Recv T3RD 21944 15-12-21 22:38:08.129 -05 000000049 INF: Tilt Motor 2: Encoder: at motor step 3613 + 5/6 15-12-21 22:38:08.129 -05 000000049 INF: Tilt Motor 2: Moving to 21156 encoder counts 15-12-21 22:38:08.129 -05 000000090 INF: Tilt Motor 3: Encoder: at motor step 3657 + 2/6 15-12-21 22:38:08.129 -05 000000090 INF: Tilt Motor 3: Moving to 21299 encoder counts 15-12-21 22:38:08.129 -05 000000049 INF: FPGA: Xmit T2MOVETO 21156\n 15-12-21 22:38:08.129 -05 000000085 INF: Tilt Motor 1: Encoder: at motor step 3518 + 0/6 15-12-21 22:38:08.129 -05 000000085 INF: Tilt Motor 1: Moving to 21756 encoder counts 15-12-21 22:38:08.131 -05 000000090 INF: FPGA: Xmit T3MOVETO 21299\n 15-12-21 22:38:08.133 -05 000000085 INF: FPGA: Xmit T1MOVETO 21756\n 15-12-21 22:38:08.169 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:08.210 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.017C:A1\r\n 15-12-21 22:38:08.210 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:08.270 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:08.332 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:08.380 -05 000000079 INF: FPGA: Recv T2MOVETO 87 15-12-21 22:38:08.380 -05 000000079 INF: FPGA: Recv T3MOVETO 108 15-12-21 22:38:08.380 -05 000000049 INF: Tilt Motor 2: To move from 5.507 to 5.374 (-0.134 mm) should take 88 steps, but required 87 steps (0.133 mm). Slippage = -0.002 mm (0.01%) 15-12-21 22:38:08.380 -05 000000049 INF: FPGA: Xmit T2RD\n 15-12-21 22:38:08.380 -05 000000090 INF: Tilt Motor 3: To move from 5.574 to 5.410 (-0.164 mm) should take 108 steps, but required 108 steps (0.165 mm). Slippage = 0.000 mm (0.00%) 15-12-21 22:38:08.382 -05 000000090 INF: FPGA: Xmit T3RD\n 15-12-21 22:38:08.442 -05 000000081 INF: FPGA: Recv T1MOVETO 107 15-12-21 22:38:08.442 -05 000000081 INF: FPGA: Recv T2RD 21162 15-12-21 22:38:08.442 -05 000000081 INF: FPGA: Recv T3RD 21300 15-12-21 22:38:08.442 -05 000000085 INF: Tilt Motor 1: To move from 5.361 to 5.526 (0.165 mm) should take 108 steps, but required 107 steps (0.163 mm). Slippage = -0.002 mm (-0.01%) 15-12-21 22:38:08.443 -05 000000085 INF: FPGA: Xmit T1RD\n 15-12-21 22:38:08.443 -05 000000090 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 22:38:08.443 -05 000000049 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 22:38:08.445 -05 000000090 INF: FPGA: Xmit T3RD\n 15-12-21 22:38:08.447 -05 000000049 INF: FPGA: Xmit T2RD\n 15-12-21 22:38:08.503 -05 000000055 INF: FPGA: Recv T1RD 21750 15-12-21 22:38:08.503 -05 000000055 INF: FPGA: Recv T3RD 21300 15-12-21 22:38:08.503 -05 000000055 INF: FPGA: Recv T2RD 21162 15-12-21 22:38:08.503 -05 000000049 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 22:38:08.503 -05 000000049 INF: FPGA: Xmit T2RD\n 15-12-21 22:38:08.503 -05 000000085 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 22:38:08.504 -05 000000090 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 22:38:08.505 -05 000000085 INF: FPGA: Xmit T1RD\n 15-12-21 22:38:08.507 -05 000000090 INF: FPGA: Xmit T3RD\n 15-12-21 22:38:08.558 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:08.567 -05 000000022 INF: FPGA: Recv T2RD 21162 15-12-21 22:38:08.567 -05 000000022 INF: FPGA: Recv T1RD 21750 15-12-21 22:38:08.567 -05 000000022 INF: FPGA: Recv T3RD 21300 15-12-21 22:38:08.567 -05 000000090 INF: Tilt Motor 3: Encoder: at motor step 3550 + 0/6 15-12-21 22:38:08.567 -05 000000085 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 22:38:08.567 -05 000000085 INF: FPGA: Xmit T1RD\n 15-12-21 22:38:08.567 -05 000000090 INF: Tilt Motor 3: After move to 5.4099, error = 0.0003, min/max error = -0.0015/0.0009, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:38:08.567 -05 000000090 INF: Tilt Motor 3: Moved to 5.4102 after 490.5886 ms 15-12-21 22:38:08.567 -05 000000049 INF: Tilt Motor 2: Encoder: at motor step 3527 + 0/6 15-12-21 22:38:08.568 -05 000000049 INF: Tilt Motor 2: After move to 5.3736, error = 0.0015, min/max error = -0.0015/0.0016, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:38:08.568 -05 000000049 INF: Tilt Motor 2: Moved to 5.3751 after 491.1712 ms 15-12-21 22:38:08.568 -05 000000090 INF: ====================================== 15-12-21 22:38:08.568 -05 000000049 INF: ====================================== 15-12-21 22:38:08.582 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:08.585 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:08.585 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:08.627 -05 000000090 INF: FPGA: Recv T1RD 21750 15-12-21 22:38:08.627 -05 000000085 INF: Tilt Motor 1: Encoder: at motor step 3625 + 0/6 15-12-21 22:38:08.627 -05 000000085 INF: Tilt Motor 1: After move to 5.5260, error = -0.0015, min/max error = -0.0015/0.0015, tolerance = 0.0107 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:38:08.628 -05 000000085 INF: Tilt Motor 1: Moved to 5.5245 after 551.2385 ms 15-12-21 22:38:08.628 -05 000000085 INF: ====================================== 15-12-21 22:38:08.631 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Aligning=================== 15-12-21 22:38:08.636 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Aligning=================== 15-12-21 22:38:08.638 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface=================== 15-12-21 22:38:08.640 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface=================== 15-12-21 22:38:08.646 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:08.660 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:08.661 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:08.663 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:08.668 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:08.770 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:08.771 -05 000000057 INF: Compensator: Remaining IntoPath 15-12-21 22:38:08.771 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:08.772 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:08.798 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:08.803 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:38:08.806 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:38:08.814 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:08.814 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:38:08.814 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:08.814 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -118.6 um, section = A_1 15-12-21 22:38:08.818 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:08.819 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:08.822 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:08.822 -05 000000056 INF: ===================Move X,Y=================== 15-12-21 22:38:08.822 -05 000000022 INF: ===================MoveEmissionFilters=================== 15-12-21 22:38:08.823 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:38:08.823 -05 000000085 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:38:08.823 -05 000000056 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:38:08.823 -05 000000085 INF: Z Motor: Moving to -0.1609 mm, started at -0.1186 mm 15-12-21 22:38:08.823 -05 000000085 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:38:08.824 -05 000000079 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:38:08.824 -05 000000049 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:38:08.824 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:38:08.824 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:38:08.825 -05 000000081 INF: ===================Move X Motor without settling=================== 15-12-21 22:38:08.829 -05 000000090 INF: ===================Move Y Motor without settling=================== 15-12-21 22:38:08.829 -05 000000081 INF: X Motor: Xmit PR VM\n 15-12-21 22:38:08.829 -05 000000090 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:38:08.829 -05 000000090 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:38:08.829 -05 000000079 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:38:08.829 -05 000000049 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:38:08.830 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:38:08.834 -05 000000090 INF: Y Motor: Xmit 1G\n 15-12-21 22:38:08.837 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:38:08.837 -05 000000068 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:38:08.837 -05 000000024 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:38:08.837 -05 000000080 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:38:08.837 -05 000000055 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:38:08.837 -05 000000095 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:38:08.838 -05 000000055 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:38:08.838 -05 000000080 INF: ====================================== 15-12-21 22:38:08.845 -05 000000055 INF: ====================================== 15-12-21 22:38:08.845 -05 000000095 INF: ====================================== 15-12-21 22:38:08.845 -05 000000068 INF: ====================================== 15-12-21 22:38:08.845 -05 000000024 INF: ====================================== 15-12-21 22:38:08.851 -05 000000095 INF: FPGA: Recv ZTRG 15-12-21 22:38:08.851 -05 000000085 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:38:08.851 -05 000000049 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:38:08.852 -05 000000079 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:38:08.852 -05 000000080 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:38:08.852 -05 000000055 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:38:08.852 -05 000000095 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:38:08.856 -05 000000081 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:38:08.856 -05 000000081 INF: X Motor: Xmit PR VI\n 15-12-21 22:38:08.856 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:08.856 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:08.861 -05 000000095 INF: ====================================== 15-12-21 22:38:08.861 -05 000000055 INF: ====================================== 15-12-21 22:38:08.864 -05 000000080 INF: ====================================== 15-12-21 22:38:08.864 -05 000000049 INF: ====================================== 15-12-21 22:38:08.865 -05 000000079 INF: ====================================== 15-12-21 22:38:08.870 -05 000000029 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:38:08.875 -05 000000063 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:38:08.884 -05 000000029 INF: ====================================== 15-12-21 22:38:08.888 -05 000000063 INF: ====================================== 15-12-21 22:38:08.896 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:08.901 -05 000000022 INF: ====================================== 15-12-21 22:38:08.917 -05 000000090 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:38:08.917 -05 000000055 INF: FPGA: Recv ZYT 15-12-21 22:38:08.917 -05 000000085 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:38:08.919 -05 000000090 INF: Y Motor: Recv 1G\r\n 15-12-21 22:38:08.919 -05 000000085 INF: FPGA: Xmit ZMV 42186\n 15-12-21 22:38:08.919 -05 000000081 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:38:08.919 -05 000000081 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:38:08.920 -05 000000081 INF: X Motor: Moving to 12.8720 mm @15.000 mm/sec, started at 81.0288 mm 15-12-21 22:38:08.922 -05 000000090 INF: Y Motor: Xmit 1D\n 15-12-21 22:38:08.922 -05 000000081 INF: X Motor: Xmit MA -18894\n 15-12-21 22:38:08.971 -05 000000095 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 22:38:08.971 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 22:38:08.973 -05 000000090 INF: Y Motor: Recv 1D\r\n 15-12-21 22:38:08.973 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:08.975 -05 000000081 INF: X Motor: Recv MA -18894\r\n> 15-12-21 22:38:08.975 -05 000000090 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:38:08.976 -05 000000081 INF: X Motor: WaitUntilStopped 64544 15-12-21 22:38:08.977 -05 000000090 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:38:09.002 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:09.033 -05 000000080 INF: FPGA: Recv ZMV 15-12-21 22:38:09.033 -05 000000085 INF: Z Motor: MoveAndTrigger 'ZMV' command took 113.925 ms 15-12-21 22:38:09.033 -05 000000085 INF: FPGA: Xmit ZDACR\n 15-12-21 22:38:09.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:09.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:09.095 -05 000000022 INF: FPGA: Recv ZDACR 42186 15-12-21 22:38:09.095 -05 000000085 INF: Z Motor: MoveAndTrigger took 272.0057 ms w/comms 15-12-21 22:38:09.095 -05 000000085 INF: Z Motor: After move to -0.1609, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:38:09.095 -05 000000085 INF: Z Motor: MoveAbsStepped took 272.0982 ms 15-12-21 22:38:09.096 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:09.100 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:38:09.105 -05 000000095 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:09.109 -05 000000029 INF: ===================Camera Arm TDI=================== 15-12-21 22:38:09.112 -05 000000095 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:09.113 -05 000000095 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:38:09.115 -05 000000095 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:38:09.118 -05 000000095 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:38:09.160 -05 000000055 INF: FPGA: Recv ZSEL 15-12-21 22:38:09.161 -05 000000095 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:38:09.161 -05 000000095 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:09.168 -05 000000095 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:38:09.168 -05 000000095 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:38:09.168 -05 000000095 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:38:09.222 -05 000000063 INF: FPGA: Recv ZSTEP 15-12-21 22:38:09.223 -05 000000095 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:09.225 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:09.231 -05 000000095 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:38:09.234 -05 000000095 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:09.239 -05 000000095 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:38:09.241 -05 000000095 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:38:09.241 -05 000000095 INF: Z Motor: Arming to move to -0.1209 mm 15-12-21 22:38:09.241 -05 000000095 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:38:09.284 -05 000000082 INF: FPGA: Recv ZYT 15-12-21 22:38:09.284 -05 000000095 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907645 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:38:09.284 -05 000000095 INF: FPGA: Xmit ZARM 31701\n 15-12-21 22:38:09.285 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:09.285 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent CRM (7)=================== 15-12-21 22:38:09.346 -05 000000049 INF: FPGA: Recv ZARM 15-12-21 22:38:09.347 -05 000000095 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.6473 ms 15-12-21 22:38:09.347 -05 000000095 INF: Z Motor: ArmAbsStepped took 105.4323 ms 15-12-21 22:38:09.348 -05 000000095 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:09.350 -05 000000095 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:09.362 -05 000000095 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:38:09.367 -05 000000095 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:09.375 -05 000000095 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:38:09.379 -05 000000095 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:09.381 -05 000000095 INF: ====================================== 15-12-21 22:38:09.385 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:38:09.471 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 22:38:09.471 -05 000000062 INF: Current Position of Pump is: 28800 15-12-21 22:38:09.471 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:38:09.571 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:38:09.601 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:09.701 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:09.783 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:09.969 -05 000000029 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:38:09.969 -05 000000029 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:38:09.969 -05 000000029 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:38:10.033 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:10.094 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:10.094 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:10.094 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:38:10.095 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:10.454 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:38:10.470 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:38:10.470 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:10.576 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:10.598 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:10.598 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:10.703 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:10.726 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:38:10.726 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:10.835 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:10.835 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:10.836 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:10.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:10.837 -05 000000062 INF: WaitCommand(5000) start 15-12-21 22:38:10.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 22:38:10.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:10.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:10.937 -05 000000029 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:38:10.937 -05 000000029 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:38:10.938 -05 000000029 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:38:10.939 -05 000000029 INF: ====================================== 15-12-21 22:38:10.943 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:10.949 -05 000000085 INF: ====================================== 15-12-21 22:38:11.019 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:11.033 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 35.559C:A1\r\n 15-12-21 22:38:11.033 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:11.142 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:11.157 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:11.157 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:11.838 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:11.838 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 22:38:11.936 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:11.969 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 29.939C:A1\r\n 15-12-21 22:38:11.969 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:12.386 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:12.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:12.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:12.508 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:12.530 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:12.530 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:12.634 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:12.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:12.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:12.782 -05 000000090 INF: Y Motor: Moved to 70.6886 after 3805 ms 15-12-21 22:38:12.783 -05 000000090 INF: ====================================== 15-12-21 22:38:12.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:12.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 22:38:13.312 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:13.340 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:38:13.340 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:13.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:13.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:38:13.882 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:13.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:13.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:14.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:14.028 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:14.028 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:14.090 -05 000000081 INF: X Motor: Xmit PR ER\n 15-12-21 22:38:14.129 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:14.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:14.152 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:14.153 -05 000000081 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:38:14.153 -05 000000081 INF: X Motor: Moved to 12.8696 after 5178 ms 15-12-21 22:38:14.153 -05 000000081 INF: ====================================== 15-12-21 22:38:14.155 -05 000000056 INF: ===================Move X,Y=================== 15-12-21 22:38:14.163 -05 000000056 INF: ====================================== 15-12-21 22:38:14.166 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:14.167 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:14.167 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:38:14.275 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:38:14.276 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:38:14.336 -05 000000082 INF: FPGA: Recv ZFREQCL 15-12-21 22:38:14.337 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:38:14.337 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:14.338 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:38:14.402 -05 000000056 INF: FPGA: Recv TDIYERD 7068849 15-12-21 22:38:14.402 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068849 counts (70.688 mm) 15-12-21 22:38:14.403 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:14.406 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:14.409 -05 000000085 INF: ===================TDI FPGA Arm=================== 15-12-21 22:38:14.409 -05 000000028 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:38:14.409 -05 000000028 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:38:14.413 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:14.416 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:38:14.416 -05 000000085 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:38:14.461 -05 000000079 INF: FPGA: Recv TDIYPOS 15-12-21 22:38:14.462 -05 000000028 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:38:14.462 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:14.463 -05 000000028 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:38:14.463 -05 000000028 INF: ====================================== 15-12-21 22:38:14.465 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:38:14.465 -05 000000085 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:38:14.526 -05 000000055 INF: FPGA: Recv TDIYARM3 15-12-21 22:38:14.527 -05 000000085 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:14.528 -05 000000085 INF: ===================TDI FPGA Arm=================== 15-12-21 22:38:14.532 -05 000000085 INF: ====================================== 15-12-21 22:38:14.535 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:14.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:14.536 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:14.537 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:14.543 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:14.545 -05 000000028 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:38:14.545 -05 000000023 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:38:14.545 -05 000000028 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:38:14.545 -05 000000028 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:38:14.547 -05 000000028 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:38:14.547 -05 000000023 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:38:14.547 -05 000000023 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:38:14.547 -05 000000023 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:38:14.547 -05 000000028 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:38:14.549 -05 000000023 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:38:14.712 -05 000000079 INF: FPGA: Recv EX1MV 15-12-21 22:38:14.712 -05 000000023 INF: Excitation Filter 1: Moved -36 steps in 164.9419 ms 15-12-21 22:38:14.712 -05 000000023 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 165.0415 ms 15-12-21 22:38:14.712 -05 000000023 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 165.1499 ms 15-12-21 22:38:14.713 -05 000000023 INF: ====================================== 15-12-21 22:38:14.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:14.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:38:14.960 -05 000000080 INF: FPGA: Recv EX2MV 15-12-21 22:38:14.960 -05 000000028 INF: Excitation Filter 2: Moved -107 steps in 413.3395 ms 15-12-21 22:38:14.960 -05 000000028 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 415.2943 ms 15-12-21 22:38:14.960 -05 000000028 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 415.372 ms 15-12-21 22:38:14.961 -05 000000028 INF: ====================================== 15-12-21 22:38:14.962 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:14.968 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:14.969 -05 000000095 INF: ===================FPGA Z Wait=================== 15-12-21 22:38:14.969 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 22:38:14.969 -05 000000079 INF: ===================Move Y Motor without settling=================== 15-12-21 22:38:14.969 -05 000000085 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:38:14.969 -05 000000095 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:38:14.972 -05 000000079 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:38:14.972 -05 000000079 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:38:14.974 -05 000000079 INF: Y Motor: Xmit 1G\n 15-12-21 22:38:14.975 -05 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:38:14.975 -05 000000056 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:38:14.975 -05 000000085 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:38:14.983 -05 000000081 INF: ===================Camera TDI=================== 15-12-21 22:38:14.987 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:38:15.027 -05 000000079 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:38:15.028 -05 000000079 INF: Y Motor: Recv 1G\r\n 15-12-21 22:38:15.029 -05 000000079 INF: Y Motor: Xmit 1D\n 15-12-21 22:38:15.086 -05 000000079 INF: Y Motor: Recv 1D\r\n 15-12-21 22:38:15.087 -05 000000079 INF: Y Motor: Recv *407662\r\n 15-12-21 22:38:15.088 -05 000000079 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:38:15.274 -05 000000049 INF: FPGA: Recv ZWAIT 15-12-21 22:38:15.275 -05 000000095 INF: ====================================== 15-12-21 22:38:15.384 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:15.400 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:15.400 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:15.438 -05 000000081 INF: ===================Frame #1=================== 15-12-21 22:38:15.439 -05 000000024 INF: ===================Frame #1=================== 15-12-21 22:38:15.507 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:15.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:15.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:15.588 -05 000000081 INF: ===================Frame #13=================== 15-12-21 22:38:15.589 -05 000000024 INF: ===================Frame #13=================== 15-12-21 22:38:15.630 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:15.652 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:15.652 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:15.738 -05 000000081 INF: ===================Frame #25=================== 15-12-21 22:38:15.739 -05 000000024 INF: ===================Frame #25=================== 15-12-21 22:38:15.838 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:15.838 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:15.839 -05 000000062 INF: WaitCommand(5000) end 15-12-21 22:38:15.839 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:15.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:15.843 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:15.846 -05 000000055 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:38:15.846 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:15.846 -05 000000022 INF: ===================WaitCommand=================== 15-12-21 22:38:15.847 -05 000000022 INF: WaitCommand(15000) start 15-12-21 22:38:15.847 -05 000000022 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:38:15.888 -05 000000081 INF: ===================Frame #37=================== 15-12-21 22:38:15.889 -05 000000024 INF: ===================Frame #37=================== 15-12-21 22:38:15.897 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:15.997 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:16.038 -05 000000081 INF: ===================Frame #49=================== 15-12-21 22:38:16.039 -05 000000024 INF: ===================Frame #49=================== 15-12-21 22:38:16.087 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:16.142 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:16.187 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:38:16.188 -05 000000081 INF: ===================Frame #61=================== 15-12-21 22:38:16.189 -05 000000024 INF: ===================Frame #61=================== 15-12-21 22:38:16.212 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 41.620C:A1\r\n 15-12-21 22:38:16.212 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:16.273 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`28800 (0x03)\r\n(0xFF) 15-12-21 22:38:16.273 -05 000000055 INF: Current Position of Pump is: 28800 15-12-21 22:38:16.273 -05 000000055 INF: Dispense Steps 48000 is greater than steps to home syringe 28800, reducing number of steps to 28800 15-12-21 22:38:16.273 -05 000000055 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:38:16.338 -05 000000081 INF: ===================Frame #72=================== 15-12-21 22:38:16.339 -05 000000024 INF: ===================Frame #72=================== 15-12-21 22:38:16.373 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD28800R\r 15-12-21 22:38:16.459 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:16.559 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:16.591 -05 000000081 INF: ===================Frame #92=================== 15-12-21 22:38:16.591 -05 000000024 INF: ===================Frame #92=================== 15-12-21 22:38:16.646 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:16.764 -05 000000081 INF: ===================Frame #106=================== 15-12-21 22:38:16.764 -05 000000024 INF: ===================Frame #106=================== 15-12-21 22:38:16.847 -05 000000022 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:38:16.877 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:16.896 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:16.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:16.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:16.929 -05 000000081 INF: ===================Frame #119=================== 15-12-21 22:38:16.929 -05 000000024 INF: ===================Frame #119=================== 15-12-21 22:38:16.958 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:17.001 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:17.024 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:17.024 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:17.079 -05 000000081 INF: ===================Frame #131=================== 15-12-21 22:38:17.079 -05 000000024 INF: ===================Frame #131=================== 15-12-21 22:38:17.130 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:17.148 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 27.255C:A1\r\n 15-12-21 22:38:17.148 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:17.208 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:17.229 -05 000000024 INF: ===================Frame #143=================== 15-12-21 22:38:17.229 -05 000000081 INF: ===================Frame #143=================== 15-12-21 22:38:17.251 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:17.271 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:17.273 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:17.273 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:17.380 -05 000000024 INF: ===================Frame #155=================== 15-12-21 22:38:17.380 -05 000000081 INF: ===================Frame #155=================== 15-12-21 22:38:17.523 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:17.533 -05 000000081 INF: ===================Frame #167=================== 15-12-21 22:38:17.533 -05 000000024 INF: ===================Frame #167=================== 15-12-21 22:38:17.582 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:17.684 -05 000000024 INF: ===================Frame #179=================== 15-12-21 22:38:17.684 -05 000000081 INF: ===================Frame #179=================== 15-12-21 22:38:17.832 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:17.836 -05 000000081 INF: ===================Frame #191=================== 15-12-21 22:38:17.836 -05 000000024 INF: ===================Frame #191=================== 15-12-21 22:38:17.847 -05 000000022 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:38:17.894 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:17.987 -05 000000081 INF: ===================Frame #203=================== 15-12-21 22:38:17.987 -05 000000024 INF: ===================Frame #203=================== 15-12-21 22:38:18.137 -05 000000081 INF: ===================Frame #215=================== 15-12-21 22:38:18.137 -05 000000024 INF: ===================Frame #215=================== 15-12-21 22:38:18.144 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:18.207 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:18.288 -05 000000081 INF: ===================Frame #227=================== 15-12-21 22:38:18.288 -05 000000024 INF: ===================Frame #227=================== 15-12-21 22:38:18.438 -05 000000024 INF: ===================Frame #238=================== 15-12-21 22:38:18.438 -05 000000081 INF: ===================Frame #238=================== 15-12-21 22:38:18.457 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:18.518 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:18.563 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:18.585 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.013C:A1\r\n 15-12-21 22:38:18.585 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:18.688 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:18.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:18.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:18.735 -05 000000024 INF: ===================Frame #262=================== 15-12-21 22:38:18.736 -05 000000081 INF: ===================Frame #262=================== 15-12-21 22:38:18.768 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:18.808 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:18.831 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:18.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:18.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:18.847 -05 000000022 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:38:18.912 -05 000000081 INF: ===================Frame #276=================== 15-12-21 22:38:18.912 -05 000000024 INF: ===================Frame #276=================== 15-12-21 22:38:18.937 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:18.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:18.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:19.077 -05 000000081 INF: ===================Frame #289=================== 15-12-21 22:38:19.077 -05 000000024 INF: ===================Frame #289=================== 15-12-21 22:38:19.081 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:19.142 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:19.228 -05 000000024 INF: ===================Frame #301=================== 15-12-21 22:38:19.228 -05 000000081 INF: ===================Frame #301=================== 15-12-21 22:38:19.379 -05 000000024 INF: ===================Frame #313=================== 15-12-21 22:38:19.380 -05 000000081 INF: ===================Frame #313=================== 15-12-21 22:38:19.392 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:19.455 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:19.530 -05 000000081 INF: ===================Frame #325=================== 15-12-21 22:38:19.530 -05 000000024 INF: ===================Frame #325=================== 15-12-21 22:38:19.681 -05 000000081 INF: ===================Frame #337=================== 15-12-21 22:38:19.681 -05 000000024 INF: ===================Frame #337=================== 15-12-21 22:38:19.705 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:19.766 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:19.832 -05 000000081 INF: ===================Frame #349=================== 15-12-21 22:38:19.832 -05 000000024 INF: ===================Frame #349=================== 15-12-21 22:38:19.847 -05 000000022 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:38:19.983 -05 000000081 INF: ===================Frame #361=================== 15-12-21 22:38:19.983 -05 000000024 INF: ===================Frame #361=================== 15-12-21 22:38:20.016 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:20.079 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:20.133 -05 000000081 INF: ===================Frame #372=================== 15-12-21 22:38:20.133 -05 000000024 INF: ===================Frame #372=================== 15-12-21 22:38:20.182 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:20.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:20.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:20.300 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:20.329 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:20.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:20.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:20.389 -05 000000081 INF: ===================Frame #393=================== 15-12-21 22:38:20.390 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:20.390 -05 000000024 INF: ===================Frame #393=================== 15-12-21 22:38:20.390 -05 000000055 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:38:20.390 -05 000000055 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:38:20.430 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:20.453 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:20.453 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:20.490 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:38:20.539 -05 000000081 INF: ===================Frame #405=================== 15-12-21 22:38:20.540 -05 000000024 INF: ===================Frame #405=================== 15-12-21 22:38:20.579 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:20.679 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:20.689 -05 000000081 INF: ===================Frame #416=================== 15-12-21 22:38:20.690 -05 000000024 INF: ===================Frame #416=================== 15-12-21 22:38:20.764 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:20.847 -05 000000022 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:38:20.890 -05 000000024 INF: ===================Frame #432=================== 15-12-21 22:38:20.890 -05 000000081 INF: ===================Frame #432=================== 15-12-21 22:38:21.014 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:21.060 -05 000000024 INF: ===================Frame #446=================== 15-12-21 22:38:21.061 -05 000000081 INF: ===================Frame #446=================== 15-12-21 22:38:21.076 -05 000000055 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:21.076 -05 000000055 INF: ====================================== 15-12-21 22:38:21.226 -05 000000081 INF: ===================Frame #459=================== 15-12-21 22:38:21.226 -05 000000024 INF: ===================Frame #459=================== 15-12-21 22:38:21.315 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:21.328 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 47.205C:A1\r\n 15-12-21 22:38:21.328 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:21.377 -05 000000081 INF: ===================Frame #471=================== 15-12-21 22:38:21.377 -05 000000024 INF: ===================Frame #471=================== 15-12-21 22:38:21.527 -05 000000024 INF: ===================Frame #483=================== 15-12-21 22:38:21.527 -05 000000081 INF: ===================Frame #483=================== 15-12-21 22:38:21.679 -05 000000081 INF: ===================Frame #495=================== 15-12-21 22:38:21.679 -05 000000024 INF: ===================Frame #495=================== 15-12-21 22:38:21.687 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:21.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:21.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:21.802 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:21.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:21.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:21.832 -05 000000081 INF: ===================Frame #507=================== 15-12-21 22:38:21.832 -05 000000024 INF: ===================Frame #507=================== 15-12-21 22:38:21.847 -05 000000022 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:38:21.932 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:21.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:21.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:21.985 -05 000000024 INF: ===================Frame #519=================== 15-12-21 22:38:21.985 -05 000000081 INF: ===================Frame #519=================== 15-12-21 22:38:22.135 -05 000000024 INF: ===================Frame #531=================== 15-12-21 22:38:22.135 -05 000000081 INF: ===================Frame #531=================== 15-12-21 22:38:22.251 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:22.288 -05 000000024 INF: ===================Frame #543=================== 15-12-21 22:38:22.288 -05 000000081 INF: ===================Frame #543=================== 15-12-21 22:38:22.326 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 24.815C:A1\r\n 15-12-21 22:38:22.326 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:22.438 -05 000000024 INF: ===================Frame #555=================== 15-12-21 22:38:22.438 -05 000000081 INF: ===================Frame #555=================== 15-12-21 22:38:22.589 -05 000000081 INF: ===================Frame #567=================== 15-12-21 22:38:22.589 -05 000000024 INF: ===================Frame #567=================== 15-12-21 22:38:22.739 -05 000000024 INF: ===================Frame #578=================== 15-12-21 22:38:22.739 -05 000000081 INF: ===================Frame #578=================== 15-12-21 22:38:22.847 -05 000000022 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:38:23.034 -05 000000024 INF: ===================Frame #602=================== 15-12-21 22:38:23.035 -05 000000081 INF: ===================Frame #602=================== 15-12-21 22:38:23.180 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:23.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:23.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:23.209 -05 000000024 INF: ===================Frame #616=================== 15-12-21 22:38:23.210 -05 000000081 INF: ===================Frame #616=================== 15-12-21 22:38:23.301 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:23.326 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:23.326 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:23.374 -05 000000024 INF: ===================Frame #629=================== 15-12-21 22:38:23.377 -05 000000081 INF: ===================Frame #629=================== 15-12-21 22:38:23.427 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:23.450 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:23.450 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:23.524 -05 000000024 INF: ===================Frame #641=================== 15-12-21 22:38:23.527 -05 000000081 INF: ===================Frame #641=================== 15-12-21 22:38:23.674 -05 000000024 INF: ===================Frame #652=================== 15-12-21 22:38:23.677 -05 000000081 INF: ===================Frame #653=================== 15-12-21 22:38:23.689 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:23.698 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.011C:A1\r\n 15-12-21 22:38:23.698 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:23.827 -05 000000081 INF: ===================Frame #665=================== 15-12-21 22:38:23.847 -05 000000022 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:38:23.852 -05 000000024 INF: ===================Frame #666=================== 15-12-21 22:38:23.977 -05 000000081 INF: ===================Frame #676=================== 15-12-21 22:38:24.012 -05 000000024 INF: ===================Frame #679=================== 15-12-21 22:38:24.162 -05 000000024 INF: ===================Frame #691=================== 15-12-21 22:38:24.174 -05 000000081 INF: ===================Frame #692=================== 15-12-21 22:38:24.312 -05 000000024 INF: ===================Frame #703=================== 15-12-21 22:38:24.336 -05 000000081 INF: ===================Frame #705=================== 15-12-21 22:38:24.462 -05 000000024 INF: ===================Frame #715=================== 15-12-21 22:38:24.486 -05 000000081 INF: ===================Frame #717=================== 15-12-21 22:38:24.612 -05 000000024 INF: ===================Frame #727=================== 15-12-21 22:38:24.636 -05 000000081 INF: ===================Frame #728=================== 15-12-21 22:38:24.677 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:24.696 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:24.696 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:24.762 -05 000000024 INF: ===================Frame #738=================== 15-12-21 22:38:24.796 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:24.814 -05 000000081 INF: ===================Frame #743=================== 15-12-21 22:38:24.823 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:24.823 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:24.847 -05 000000022 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:38:24.924 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:24.947 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:24.947 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:24.965 -05 000000081 INF: ===================Frame #754=================== 15-12-21 22:38:24.972 -05 000000024 INF: ===================Frame #755=================== 15-12-21 22:38:25.122 -05 000000024 INF: ===================Frame #767=================== 15-12-21 22:38:25.135 -05 000000081 INF: ===================Frame #768=================== 15-12-21 22:38:25.272 -05 000000024 INF: ===================Frame #779=================== 15-12-21 22:38:25.295 -05 000000081 INF: ===================Frame #781=================== 15-12-21 22:38:25.422 -05 000000024 INF: ===================Frame #791=================== 15-12-21 22:38:25.445 -05 000000081 INF: ===================Frame #792=================== 15-12-21 22:38:25.572 -05 000000024 INF: ===================Frame #802=================== 15-12-21 22:38:25.613 -05 000000081 INF: ===================Frame #806=================== 15-12-21 22:38:25.779 -05 000000081 INF: ===================Frame #819=================== 15-12-21 22:38:25.779 -05 000000024 INF: ===================Frame #819=================== 15-12-21 22:38:25.847 -05 000000022 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:38:25.929 -05 000000081 INF: ===================Frame #831=================== 15-12-21 22:38:25.930 -05 000000024 INF: ===================Frame #831=================== 15-12-21 22:38:26.079 -05 000000081 INF: ===================Frame #843=================== 15-12-21 22:38:26.081 -05 000000024 INF: ===================Frame #843=================== 15-12-21 22:38:26.175 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:26.196 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:26.196 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:26.229 -05 000000081 INF: ===================Frame #854=================== 15-12-21 22:38:26.231 -05 000000024 INF: ===================Frame #855=================== 15-12-21 22:38:26.305 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:26.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:26.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:26.381 -05 000000024 INF: ===================Frame #866=================== 15-12-21 22:38:26.419 -05 000000081 INF: ===================Frame #869=================== 15-12-21 22:38:26.439 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:26.445 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:26.445 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:26.556 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:26.570 -05 000000081 INF: ===================Frame #881=================== 15-12-21 22:38:26.584 -05 000000024 INF: ===================Frame #882=================== 15-12-21 22:38:26.631 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 52.339C:A1\r\n 15-12-21 22:38:26.631 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:26.720 -05 000000081 INF: ===================Frame #893=================== 15-12-21 22:38:26.746 -05 000000024 INF: ===================Frame #895=================== 15-12-21 22:38:26.847 -05 000000022 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:38:26.870 -05 000000081 INF: ===================Frame #905=================== 15-12-21 22:38:26.896 -05 000000024 INF: ===================Frame #907=================== 15-12-21 22:38:27.020 -05 000000081 INF: ===================Frame #917=================== 15-12-21 22:38:27.046 -05 000000024 INF: ===================Frame #919=================== 15-12-21 22:38:27.170 -05 000000081 INF: ===================Frame #929=================== 15-12-21 22:38:27.196 -05 000000024 INF: ===================Frame #931=================== 15-12-21 22:38:27.320 -05 000000081 INF: ===================Frame #941=================== 15-12-21 22:38:27.346 -05 000000024 INF: ===================Frame #943=================== 15-12-21 22:38:27.431 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:27.470 -05 000000081 INF: ===================Frame #953=================== 15-12-21 22:38:27.496 -05 000000024 INF: ===================Frame #955=================== 15-12-21 22:38:27.503 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 22.485C:A1\r\n 15-12-21 22:38:27.503 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:27.620 -05 000000081 INF: ===================Frame #964=================== 15-12-21 22:38:27.648 -05 000000024 INF: ===================Frame #967=================== 15-12-21 22:38:27.734 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:27.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:27.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:27.798 -05 000000024 INF: ===================Frame #978=================== 15-12-21 22:38:27.847 -05 000000022 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:38:27.855 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:27.861 -05 000000081 INF: ===================Frame #983=================== 15-12-21 22:38:27.879 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:27.879 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:27.978 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:28.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:28.003 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:28.011 -05 000000081 INF: ===================Frame #995=================== 15-12-21 22:38:28.025 -05 000000024 INF: ===================Frame #996=================== 15-12-21 22:38:28.161 -05 000000081 INF: ===================Frame #1007=================== 15-12-21 22:38:28.189 -05 000000024 INF: ===================Frame #1009=================== 15-12-21 22:38:28.311 -05 000000081 INF: ===================Frame #1019=================== 15-12-21 22:38:28.339 -05 000000024 INF: ===================Frame #1021=================== 15-12-21 22:38:28.461 -05 000000081 INF: ===================Frame #1031=================== 15-12-21 22:38:28.489 -05 000000024 INF: ===================Frame #1033=================== 15-12-21 22:38:28.611 -05 000000081 INF: ===================Frame #1043=================== 15-12-21 22:38:28.639 -05 000000024 INF: ===================Frame #1045=================== 15-12-21 22:38:28.761 -05 000000081 INF: ===================Frame #1055=================== 15-12-21 22:38:28.789 -05 000000024 INF: ===================Frame #1057=================== 15-12-21 22:38:28.806 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:28.815 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:38:28.815 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:28.847 -05 000000022 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:38:28.911 -05 000000081 INF: ===================Frame #1066=================== 15-12-21 22:38:28.939 -05 000000024 INF: ===================Frame #1069=================== 15-12-21 22:38:29.091 -05 000000024 INF: ===================Frame #1081=================== 15-12-21 22:38:29.143 -05 000000081 INF: ===================Frame #1085=================== 15-12-21 22:38:29.235 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:29.241 -05 000000024 INF: ===================Frame #1093=================== 15-12-21 22:38:29.253 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:29.253 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:29.293 -05 000000081 INF: ===================Frame #1097=================== 15-12-21 22:38:29.358 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:29.377 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:29.377 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:29.391 -05 000000024 INF: ===================Frame #1104=================== 15-12-21 22:38:29.443 -05 000000081 INF: ===================Frame #1109=================== 15-12-21 22:38:29.478 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:29.502 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:29.502 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:29.594 -05 000000081 INF: ===================Frame #1120=================== 15-12-21 22:38:29.628 -05 000000024 INF: ===================Frame #1123=================== 15-12-21 22:38:29.778 -05 000000024 INF: ===================Frame #1135=================== 15-12-21 22:38:29.789 -05 000000081 INF: ===================Frame #1136=================== 15-12-21 22:38:29.847 -05 000000022 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:38:29.928 -05 000000024 INF: ===================Frame #1147=================== 15-12-21 22:38:29.951 -05 000000081 INF: ===================Frame #1149=================== 15-12-21 22:38:30.078 -05 000000024 INF: ===================Frame #1159=================== 15-12-21 22:38:30.101 -05 000000081 INF: ===================Frame #1161=================== 15-12-21 22:38:30.230 -05 000000024 INF: ===================Frame #1171=================== 15-12-21 22:38:30.251 -05 000000081 INF: ===================Frame #1172=================== 15-12-21 22:38:30.380 -05 000000024 INF: ===================Frame #1183=================== 15-12-21 22:38:30.429 -05 000000081 INF: ===================Frame #1186=================== 15-12-21 22:38:30.530 -05 000000024 INF: ===================Frame #1194=================== 15-12-21 22:38:30.592 -05 000000081 INF: ===================Frame #1199=================== 15-12-21 22:38:30.727 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:30.743 -05 000000081 INF: ===================Frame #1211=================== 15-12-21 22:38:30.752 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:30.752 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:30.753 -05 000000024 INF: ===================Frame #1212=================== 15-12-21 22:38:30.847 -05 000000022 INF: ===================WaitCommand=================== 15-12-21 22:38:30.847 -05 000000022 INF: WaitCommand(15000) end 15-12-21 22:38:30.848 -05 000000022 INF: ====================================== 15-12-21 22:38:30.851 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:30.853 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:30.858 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:30.859 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:30.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:30.876 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:30.876 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:30.893 -05 000000081 INF: ===================Frame #1223=================== 15-12-21 22:38:30.917 -05 000000024 INF: ===================Frame #1225=================== 15-12-21 22:38:30.937 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:30.937 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Selecting Reagent CWM (8)=================== 15-12-21 22:38:30.937 -05 000000062 INF: Valve B2: Go to position 8 15-12-21 22:38:30.937 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:38:30.986 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:30.999 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 7\r 15-12-21 22:38:30.999 -05 000000062 INF: Valve B2: 30.374 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:38:30.999 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 7 to 8 15-12-21 22:38:30.999 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW8\r 15-12-21 22:38:31.000 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:38:31.000 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:38:31.045 -05 000000081 INF: ===================Frame #1235=================== 15-12-21 22:38:31.062 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:31.062 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:31.067 -05 000000024 INF: ===================Frame #1237=================== 15-12-21 22:38:31.195 -05 000000081 INF: ===================Frame #1247=================== 15-12-21 22:38:31.217 -05 000000024 INF: ===================Frame #1249=================== 15-12-21 22:38:31.247 -05 000000082 INF: FPGA: Recv TDIYWAIT 15-12-21 22:38:31.248 -05 000000085 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:38:31.250 -05 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:38:31.251 -05 000000028 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:38:31.251 -05 000000078 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:38:31.251 -05 000000028 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:38:31.251 -05 000000028 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:38:31.251 -05 000000028 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:38:31.251 -05 000000078 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:38:31.254 -05 000000078 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:38:31.254 -05 000000078 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:38:31.254 -05 000000028 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:38:31.260 -05 000000078 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:38:31.346 -05 000000081 INF: ===================Frame #1250=================== 15-12-21 22:38:31.368 -05 000000024 INF: ===================Frame #1250=================== 15-12-21 22:38:31.372 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 8\r 15-12-21 22:38:31.372 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:31.372 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Opening shutoff valve=================== 15-12-21 22:38:31.372 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:31.413 -05 000000024 INF: Camera complete - got 1250 frames. 15-12-21 22:38:31.415 -05 000000081 INF: Camera complete - got 1250 frames. 15-12-21 22:38:31.416 -05 000000024 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:38:31.416 -05 000000081 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:38:31.433 -05 000000049 INF: FPGA: Recv EX1MV 15-12-21 22:38:31.433 -05 000000028 INF: Excitation Filter 1: Moved 36 steps in 181.5333 ms 15-12-21 22:38:31.433 -05 000000028 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 181.6176 ms 15-12-21 22:38:31.433 -05 000000028 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 181.6767 ms 15-12-21 22:38:31.433 -05 000000028 INF: ====================================== 15-12-21 22:38:31.435 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:38:31.435 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:31.542 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:38:31.562 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:38:31.562 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:31.622 -05 000000068 INF: FPGA: Recv EX2MV 15-12-21 22:38:31.622 -05 000000078 INF: Excitation Filter 2: Moved 107 steps in 368.0443 ms 15-12-21 22:38:31.622 -05 000000078 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 368.1593 ms 15-12-21 22:38:31.622 -05 000000078 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 370.712 ms 15-12-21 22:38:31.623 -05 000000078 INF: ====================================== 15-12-21 22:38:31.627 -05 000000085 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:38:31.631 -05 000000085 INF: ====================================== 15-12-21 22:38:31.670 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:31.686 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:38:31.686 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:31.755 -05 000000081 INF: ===================Camera TDI=================== 15-12-21 22:38:31.790 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:31.790 -05 000000081 INF: ====================================== 15-12-21 22:38:31.790 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:31.790 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 22:38:31.790 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:31.810 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 56.950C:A1\r\n 15-12-21 22:38:31.810 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:31.866 -05 000000024 INF: ===================Camera TDI=================== 15-12-21 22:38:31.871 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:31.880 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Deblock", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:38:31.898 -05 000000024 INF: ====================================== 15-12-21 22:38:31.899 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 22:38:31.903 -05 000000056 INF: ====================================== 15-12-21 22:38:31.935 -05 000000079 INF: Y Motor: Moved to 9.0764 after 16848 ms 15-12-21 22:38:31.936 -05 000000079 INF: ====================================== 15-12-21 22:38:31.937 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:31.941 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:31.942 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:31.944 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:38:31.971 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:38:31.999 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:38:31.999 -05 000000082 INF: FPGA: Recv TDICLINES 9440 15-12-21 22:38:31.999 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 22:38:31.999 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:38:31.999 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:38:32.058 -05 000000079 INF: FPGA: Recv TDIYERD 907646 15-12-21 22:38:32.058 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:38:32.099 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P4608R\r 15-12-21 22:38:32.121 -05 000000056 INF: FPGA: Recv ZADCR 37718 15-12-21 22:38:32.122 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.144. Y moved -60.304 mm 15-12-21 22:38:32.122 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:38:32.183 -05 000000068 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:38:32.183 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:38:32.183 -05 000000057 INF: TDIScan finished after 23378.5372 ms 15-12-21 22:38:32.184 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:38:32.184 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:32.184 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:38:32.186 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.214 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.130 um 15-12-21 22:38:32.215 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.219 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.223 -05 000000095 INF: ===================Dither Clean Up Command=================== 15-12-21 22:38:32.223 -05 000000082 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:38:32.223 -05 000000056 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:38:32.223 -05 000000081 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:38:32.223 -05 000000082 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:38:32.223 -05 000000081 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:38:32.223 -05 000000081 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:38:32.233 -05 000000078 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:38:32.233 -05 000000028 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:38:32.233 -05 000000078 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:38:32.238 -05 000000028 INF: ===================LFT:Extracting coords=================== 15-12-21 22:38:32.248 -05 000000079 INF: FPGA: Recv ZSTEP 15-12-21 22:38:32.248 -05 000000079 INF: FPGA: Recv ZSEL 15-12-21 22:38:32.249 -05 000000082 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:38:32.249 -05 000000078 INF: FPGA: Xmit ZDACW 42186\n 15-12-21 22:38:32.250 -05 000000056 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:38:32.250 -05 000000081 INF: ====================================== 15-12-21 22:38:32.251 -05 000000082 INF: ====================================== 15-12-21 22:38:32.286 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:32.309 -05 000000068 INF: FPGA: Recv ZDACW 15-12-21 22:38:32.310 -05 000000056 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:38:32.310 -05 000000078 INF: ====================================== 15-12-21 22:38:32.311 -05 000000056 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:38:32.311 -05 000000056 INF: ====================================== 15-12-21 22:38:32.334 -05 000000028 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:38:32.335 -05 000000028 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:38:32.337 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:32.337 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:32.337 -05 000000068 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:38:32.337 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:32.337 -05 000000022 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:38:32.338 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:38:32.339 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:32.339 -05 000000029 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:38:32.345 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:32.371 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:32.372 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:32.372 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:32.513 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:32.539 -05 000000029 INF: LFT found best fwhm score 2.649968 in 150 ms 15-12-21 22:38:32.539 -05 000000029 INF: LFT found good score at index 5789 with fwhm value 2.649968. Next cycle, cycle 45 starting Z position for top surface is at -0.169 mm FC:A, C:44,L:1,T 15-12-21 22:38:32.541 -05 000000090 INF: LFT found best fwhm score 2.768601 in 152 ms 15-12-21 22:38:32.541 -05 000000090 INF: LFT found good score at index 5493 with fwhm value 2.768601. Next cycle, cycle 45 starting Z position for top surface is at -0.170 mm FC:A, C:44,L:1,T 15-12-21 22:38:32.548 -05 000000022 INF: LFT found best fwhm score 2.885533 in 166 ms 15-12-21 22:38:32.548 -05 000000022 INF: LFT found good score at index 5845 with fwhm value 2.885533. Next cycle, cycle 45 starting Z position for top surface is at -0.169 mm FC:A, C:44,L:1,T 15-12-21 22:38:32.548 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:32.548 -05 000000068 INF: LFT found best fwhm score 2.783204 in 165 ms 15-12-21 22:38:32.548 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:32.548 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:32.548 -05 000000068 INF: LFT found good score at index 5809 with fwhm value 2.783204. Next cycle, cycle 45 starting Z position for top surface is at -0.169 mm FC:A, C:44,L:1,T 15-12-21 22:38:32.549 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:32.580 -05 000000068 INF: ====================================== 15-12-21 22:38:32.580 -05 000000029 INF: ====================================== 15-12-21 22:38:32.583 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:32.583 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:32.588 -05 000000090 INF: ====================================== 15-12-21 22:38:32.588 -05 000000022 INF: ====================================== 15-12-21 22:38:32.624 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:32.644 -05 000000028 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:38:32.647 -05 000000028 INF: LFT weighted average best Z for top surface is at -0.169mm FC:A, C:44,L:1,T 15-12-21 22:38:32.647 -05 000000028 INF: ====================================== 15-12-21 22:38:32.651 -05 000000095 INF: ====================================== 15-12-21 22:38:32.653 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.658 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:38:32.658 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.659 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:38:32.659 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.659 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:38:32.660 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.660 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:38:32.660 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.661 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:38:32.661 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:38:32.662 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:38:32.662 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:38:32.663 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 22:38:32.663 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:38:32.663 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:38:32.663 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:32.663 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:38:32.664 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:38:32.664 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:38:32.664 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:38:32.666 -05 000000048 INF: ===================Registering and Extracting C044 L001 T1101=================== 15-12-21 22:38:32.666 -05 000000027 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102=================== 15-12-21 22:38:32.666 -05 000000051 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103=================== 15-12-21 22:38:32.667 -05 000000040 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104=================== 15-12-21 22:38:32.669 -05 000000077 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105=================== 15-12-21 22:38:32.672 -05 000000038 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106=================== 15-12-21 22:38:32.675 -05 000000066 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107=================== 15-12-21 22:38:32.697 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:32.697 -05 000000011 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107, Registering and Extracting C044 L001 T1108=================== 15-12-21 22:38:32.699 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:32.704 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.704 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:38:32.705 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:32.705 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -160.9 um, section = A_1 15-12-21 22:38:32.709 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:32.710 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:32.711 -05 000000023 INF: ===================MoveEmissionFilters=================== 15-12-21 22:38:32.713 -05 000000085 INF: ===================Move X,Y=================== 15-12-21 22:38:32.713 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:38:32.713 -05 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:32.713 -05 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:38:32.714 -05 000000079 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:38:32.715 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:38:32.715 -05 000000085 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:38:32.715 -05 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:38:32.715 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:38:32.723 -05 000000079 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:38:32.723 -05 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:38:32.723 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:38:32.723 -05 000000080 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:38:32.723 -05 000000090 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:38:32.723 -05 000000049 INF: ===================Move X Motor without settling=================== 15-12-21 22:38:32.724 -05 000000028 INF: ===================Move Y Motor without settling=================== 15-12-21 22:38:32.724 -05 000000078 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:38:32.724 -05 000000049 INF: X Motor: Xmit PR VM\n 15-12-21 22:38:32.724 -05 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:32.724 -05 000000028 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:38:32.724 -05 000000082 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:38:32.724 -05 000000028 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:38:32.724 -05 000000068 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:38:32.724 -05 000000022 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:38:32.725 -05 000000068 INF: ====================================== 15-12-21 22:38:32.725 -05 000000022 INF: ====================================== 15-12-21 22:38:32.725 -05 000000082 INF: ====================================== 15-12-21 22:38:32.725 -05 000000024 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:38:32.725 -05 000000028 INF: Y Motor: Xmit 1G\n 15-12-21 22:38:32.726 -05 000000095 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:38:32.727 -05 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:38:32.727 -05 000000090 INF: ====================================== 15-12-21 22:38:32.727 -05 000000024 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:38:32.728 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:38:32.728 -05 000000024 INF: ====================================== 15-12-21 22:38:32.728 -05 000000022 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:32.728 -05 000000082 INF: ===================Camera Arm TDI=================== 15-12-21 22:38:32.728 -05 000000095 INF: ====================================== 15-12-21 22:38:32.735 -05 000000078 INF: ====================================== 15-12-21 22:38:32.735 -05 000000068 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:38:32.736 -05 000000056 INF: ====================================== 15-12-21 22:38:32.736 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:38:32.736 -05 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:38:32.736 -05 000000068 INF: ====================================== 15-12-21 22:38:32.737 -05 000000022 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:32.737 -05 000000079 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:38:32.738 -05 000000081 INF: ====================================== 15-12-21 22:38:32.738 -05 000000029 INF: ====================================== 15-12-21 22:38:32.739 -05 000000022 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:38:32.739 -05 000000022 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:38:32.739 -05 000000022 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:38:32.747 -05 000000079 INF: ====================================== 15-12-21 22:38:32.750 -05 000000023 INF: ====================================== 15-12-21 22:38:32.759 -05 000000090 INF: FPGA: Recv ZSEL 15-12-21 22:38:32.760 -05 000000028 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:38:32.760 -05 000000022 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:38:32.760 -05 000000022 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:32.761 -05 000000049 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:38:32.761 -05 000000049 INF: X Motor: Xmit PR VI\n 15-12-21 22:38:32.761 -05 000000028 INF: Y Motor: Recv 1G\r\n 15-12-21 22:38:32.761 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.287C:A1\r\n 15-12-21 22:38:32.761 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:32.762 -05 000000028 INF: Y Motor: Xmit 1D\n 15-12-21 22:38:32.764 -05 000000022 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:38:32.764 -05 000000022 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:38:32.764 -05 000000022 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:38:32.848 -05 000000068 INF: FPGA: Recv ZSTEP 15-12-21 22:38:32.850 -05 000000028 INF: Y Motor: Recv 1D\r\n 15-12-21 22:38:32.851 -05 000000049 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:38:32.851 -05 000000049 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:38:32.851 -05 000000049 INF: X Motor: Moving to 13.6440 mm @15.000 mm/sec, started at 12.8696 mm 15-12-21 22:38:32.851 -05 000000028 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:38:32.851 -05 000000049 INF: X Motor: Xmit MA -18578\n 15-12-21 22:38:32.851 -05 000000022 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:32.852 -05 000000028 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:38:32.855 -05 000000022 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:38:32.856 -05 000000022 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:32.864 -05 000000022 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:38:32.864 -05 000000022 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:38:32.864 -05 000000022 INF: Z Motor: Arming to move to -0.1209 mm 15-12-21 22:38:32.864 -05 000000022 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:38:32.892 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:32.909 -05 000000023 INF: FPGA: Recv ZYT 15-12-21 22:38:32.910 -05 000000022 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907644 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:38:32.910 -05 000000022 INF: FPGA: Xmit ZARM 31701\n 15-12-21 22:38:32.911 -05 000000049 INF: X Motor: Recv MA -18578\r\n> 15-12-21 22:38:32.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:32.912 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:32.912 -05 000000049 INF: X Motor: WaitUntilStopped 60052 15-12-21 22:38:32.949 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:32.982 -05 000000095 INF: FPGA: Recv ZARM 15-12-21 22:38:32.982 -05 000000022 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 72.5687 ms 15-12-21 22:38:32.982 -05 000000022 INF: Z Motor: ArmAbsStepped took 118.2143 ms 15-12-21 22:38:32.983 -05 000000022 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:33.018 -05 000000022 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:33.029 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:33.036 -05 000000022 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:38:33.037 -05 000000022 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:33.041 -05 000000022 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:38:33.041 -05 000000022 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:33.044 -05 000000022 INF: ====================================== 15-12-21 22:38:33.291 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:33.367 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:33.371 -05 000000049 INF: X Motor: Xmit PR ER\n 15-12-21 22:38:33.459 -05 000000049 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:38:33.459 -05 000000049 INF: X Motor: Moved to 13.6436 after 547 ms 15-12-21 22:38:33.460 -05 000000049 INF: ====================================== 15-12-21 22:38:33.628 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:33.726 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:33.917 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:33.964 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.007C:A1\r\n 15-12-21 22:38:33.964 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:33.977 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:34.060 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:34.335 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:34.365 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:34.440 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:34.440 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Pumping Reagent CWM (8)=================== 15-12-21 22:38:34.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:34.441 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:34.458 -05 000000082 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:38:34.458 -05 000000082 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:38:34.458 -05 000000082 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:38:34.540 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:38:34.541 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:34.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:34.556 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:34.617 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 22:38:34.617 -05 000000062 INF: Current Position of Pump is: 4608 15-12-21 22:38:34.617 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:38:34.717 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:38:34.717 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:34.766 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:34.767 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:34.767 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:34.866 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:34.947 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:35.197 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:35.297 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:35.297 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:35.298 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Closing shutoff valve=================== 15-12-21 22:38:35.298 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:35.352 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:38:35.352 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:35.514 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:38:35.575 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:38:35.575 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:35.680 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:35.695 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:38:35.695 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:35.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:35.837 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:35.839 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:35.840 -05 000000062 INF: WaitCommand(5000) start 15-12-21 22:38:35.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 5 of 5 seconds left=================== 15-12-21 22:38:35.981 -05 000000082 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:38:35.981 -05 000000082 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:38:35.981 -05 000000082 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:38:35.983 -05 000000082 INF: ====================================== 15-12-21 22:38:35.986 -05 000000080 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:35.989 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:35.992 -05 000000080 INF: ====================================== 15-12-21 22:38:36.006 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:36.006 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:36.111 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:36.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:36.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:36.238 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:36.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:36.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:36.446 -05 000000028 INF: Y Motor: Moved to 70.6886 after 3595 ms 15-12-21 22:38:36.447 -05 000000028 INF: ====================================== 15-12-21 22:38:36.449 -05 000000085 INF: ===================Move X,Y=================== 15-12-21 22:38:36.451 -05 000000085 INF: ====================================== 15-12-21 22:38:36.459 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:36.466 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:36.467 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:38:36.505 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:38:36.506 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:38:36.551 -05 000000095 INF: FPGA: Recv ZFREQCL 15-12-21 22:38:36.552 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:38:36.552 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:36.553 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:38:36.612 -05 000000022 INF: FPGA: Recv TDIYERD 7068852 15-12-21 22:38:36.612 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068852 counts (70.689 mm) 15-12-21 22:38:36.613 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:36.614 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:36.621 -05 000000029 INF: ===================TDI FPGA Arm=================== 15-12-21 22:38:36.621 -05 000000056 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:38:36.626 -05 000000056 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:38:36.636 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:36.638 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:38:36.638 -05 000000029 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:38:36.677 -05 000000082 INF: FPGA: Recv TDIYPOS 15-12-21 22:38:36.678 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:36.693 -05 000000056 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:38:36.693 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:38:36.693 -05 000000029 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:38:36.694 -05 000000056 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:38:36.694 -05 000000056 INF: ====================================== 15-12-21 22:38:36.738 -05 000000049 INF: FPGA: Recv TDIYARM3 15-12-21 22:38:36.739 -05 000000029 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:36.747 -05 000000029 INF: ===================TDI FPGA Arm=================== 15-12-21 22:38:36.752 -05 000000029 INF: ====================================== 15-12-21 22:38:36.758 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:36.760 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:36.760 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:36.761 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:36.769 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:36.770 -05 000000022 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:38:36.770 -05 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:38:36.771 -05 000000022 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:38:36.771 -05 000000022 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:38:36.771 -05 000000022 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:38:36.771 -05 000000022 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:38:36.771 -05 000000090 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:38:36.771 -05 000000090 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:38:36.771 -05 000000090 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:38:36.779 -05 000000090 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:38:36.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:36.840 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 4 of 5 seconds left=================== 15-12-21 22:38:36.910 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:36.926 -05 000000028 INF: FPGA: Recv EX1MV 15-12-21 22:38:36.926 -05 000000090 INF: Excitation Filter 1: Moved -36 steps in 155.1372 ms 15-12-21 22:38:36.926 -05 000000090 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 155.2688 ms 15-12-21 22:38:36.926 -05 000000090 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 155.3718 ms 15-12-21 22:38:36.927 -05 000000090 INF: ====================================== 15-12-21 22:38:36.943 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.008C:A1\r\n 15-12-21 22:38:36.943 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:37.175 -05 000000082 INF: FPGA: Recv EX2MV 15-12-21 22:38:37.175 -05 000000022 INF: Excitation Filter 2: Moved -107 steps in 404.6237 ms 15-12-21 22:38:37.175 -05 000000022 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 404.7366 ms 15-12-21 22:38:37.175 -05 000000022 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 404.815 ms 15-12-21 22:38:37.176 -05 000000022 INF: ====================================== 15-12-21 22:38:37.178 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:37.199 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:37.218 -05 000000022 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:38:37.218 -05 000000090 INF: ===================FPGA Z Wait=================== 15-12-21 22:38:37.218 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 22:38:37.228 -05 000000022 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:38:37.231 -05 000000090 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:38:37.236 -05 000000028 INF: ===================Move Y Motor without settling=================== 15-12-21 22:38:37.241 -05 000000022 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:38:37.248 -05 000000028 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:38:37.248 -05 000000028 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:38:37.253 -05 000000028 INF: Y Motor: Xmit 1G\n 15-12-21 22:38:37.261 -05 000000078 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:38:37.263 -05 000000095 INF: ===================Camera TDI=================== 15-12-21 22:38:37.263 -05 000000085 INF: ===================Camera TDI=================== 15-12-21 22:38:37.315 -05 000000028 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:38:37.316 -05 000000028 INF: Y Motor: Recv 1G\r\n 15-12-21 22:38:37.319 -05 000000028 INF: Y Motor: Xmit 1D\n 15-12-21 22:38:37.394 -05 000000028 INF: Y Motor: Recv 1D\r\n 15-12-21 22:38:37.395 -05 000000028 INF: Y Motor: Recv *407662\r\n 15-12-21 22:38:37.457 -05 000000028 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:38:37.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:37.535 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:37.535 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:37.579 -05 000000024 INF: FPGA: Recv ZWAIT 15-12-21 22:38:37.581 -05 000000090 INF: ====================================== 15-12-21 22:38:37.633 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:37.661 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:37.661 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:37.728 -05 000000085 INF: ===================Frame #1=================== 15-12-21 22:38:37.758 -05 000000095 INF: ===================Frame #4=================== 15-12-21 22:38:37.797 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:37.827 -05 000000040 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107=================== 15-12-21 22:38:37.841 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:37.842 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 3 of 5 seconds left=================== 15-12-21 22:38:37.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:37.863 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:37.878 -05 000000085 INF: ===================Frame #14=================== 15-12-21 22:38:37.913 -05 000000060 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107, Registering and Extracting C044 L001 T1109=================== 15-12-21 22:38:37.934 -05 000000095 INF: ===================Frame #18=================== 15-12-21 22:38:38.050 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:38.114 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 18.240C:A1\r\n 15-12-21 22:38:38.114 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:38.188 -05 000000051 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107=================== 15-12-21 22:38:38.192 -05 000000085 INF: ===================Frame #39=================== 15-12-21 22:38:38.213 -05 000000089 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107, Registering and Extracting C044 L001 T1110=================== 15-12-21 22:38:38.235 -05 000000095 INF: ===================Frame #42=================== 15-12-21 22:38:38.248 -05 000000038 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107=================== 15-12-21 22:38:38.313 -05 000000075 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107, Registering and Extracting C044 L001 T1111=================== 15-12-21 22:38:38.346 -05 000000085 INF: ===================Frame #51=================== 15-12-21 22:38:38.424 -05 000000077 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107=================== 15-12-21 22:38:38.444 -05 000000095 INF: ===================Frame #59=================== 15-12-21 22:38:38.497 -05 000000085 INF: ===================Frame #63=================== 15-12-21 22:38:38.514 -05 000000071 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107, Registering and Extracting C044 L001 T1112=================== 15-12-21 22:38:38.595 -05 000000095 INF: ===================Frame #70=================== 15-12-21 22:38:38.648 -05 000000085 INF: ===================Frame #75=================== 15-12-21 22:38:38.732 -05 000000048 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1107=================== 15-12-21 22:38:38.812 -05 000000085 INF: ===================Frame #88=================== 15-12-21 22:38:38.812 -05 000000027 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106=================== 15-12-21 22:38:38.813 -05 000000094 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1113, Registering and Extracting C044 L001 T1114=================== 15-12-21 22:38:38.814 -05 000000065 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1113, Registering and Extracting C044 L001 T1114=================== 15-12-21 22:38:38.842 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:38.842 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 2 of 5 seconds left=================== 15-12-21 22:38:38.866 -05 000000095 INF: ===================Frame #92=================== 15-12-21 22:38:38.906 -05 000000066 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1113=================== 15-12-21 22:38:38.913 -05 000000009 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1113, Registering and Extracting C044 L001 T1115=================== 15-12-21 22:38:38.950 -05 000000011 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1113=================== 15-12-21 22:38:39.026 -05 000000074 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1113, Registering and Extracting C044 L001 T1116=================== 15-12-21 22:38:39.208 -05 000000095 INF: ===================Frame #119=================== 15-12-21 22:38:39.239 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:39.324 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:38:39.324 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:39.359 -05 000000095 INF: ===================Frame #131=================== 15-12-21 22:38:39.423 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:39.440 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:39.440 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:39.530 -05 000000095 INF: ===================Frame #143=================== 15-12-21 22:38:39.559 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:39.610 -05 000000085 INF: ===================Frame #151=================== 15-12-21 22:38:39.626 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:39.626 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:39.694 -05 000000095 INF: ===================Frame #157=================== 15-12-21 22:38:39.746 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:39.760 -05 000000085 INF: ===================Frame #163=================== 15-12-21 22:38:39.815 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:39.815 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:39.842 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:39.843 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 1 of 5 seconds left=================== 15-12-21 22:38:39.845 -05 000000095 INF: ===================Frame #169=================== 15-12-21 22:38:39.925 -05 000000085 INF: ===================Frame #176=================== 15-12-21 22:38:39.995 -05 000000095 INF: ===================Frame #181=================== 15-12-21 22:38:40.146 -05 000000095 INF: ===================Frame #193=================== 15-12-21 22:38:40.318 -05 000000095 INF: ===================Frame #207=================== 15-12-21 22:38:40.470 -05 000000095 INF: ===================Frame #219=================== 15-12-21 22:38:40.623 -05 000000095 INF: ===================Frame #231=================== 15-12-21 22:38:40.774 -05 000000095 INF: ===================Frame #243=================== 15-12-21 22:38:40.842 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:40.842 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:40.842 -05 000000062 INF: WaitCommand(5000) end 15-12-21 22:38:40.843 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:40.845 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:40.846 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:40.868 -05 000000055 INF: ===================WaitCommand=================== 15-12-21 22:38:40.872 -05 000000081 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:38:40.937 -05 000000055 INF: WaitCommand(15000) start 15-12-21 22:38:40.938 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:40.938 -05 000000055 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:38:40.939 -05 000000095 INF: ===================Frame #256=================== 15-12-21 22:38:40.960 -05 000000085 INF: ===================Frame #257=================== 15-12-21 22:38:41.000 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:41.102 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:41.115 -05 000000085 INF: ===================Frame #270=================== 15-12-21 22:38:41.234 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:41.235 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:41.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:41.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:41.335 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:38:41.449 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0`4608 (0x03)\r\n(0xFF) 15-12-21 22:38:41.449 -05 000000081 INF: Current Position of Pump is: 4608 15-12-21 22:38:41.449 -05 000000081 INF: Dispense Steps 48000 is greater than steps to home syringe 4608, reducing number of steps to 4608 15-12-21 22:38:41.452 -05 000000081 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:38:41.494 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:41.539 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:41.539 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:41.549 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD4608R\r 15-12-21 22:38:41.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:41.718 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:41.795 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:41.795 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:41.818 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:41.902 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:41.939 -05 000000055 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:38:42.051 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:42.106 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.097C:A1\r\n 15-12-21 22:38:42.106 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:42.152 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:42.213 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:42.287 -05 000000085 INF: ===================Frame #362=================== 15-12-21 22:38:42.417 -05 000000095 INF: ===================Frame #373=================== 15-12-21 22:38:42.463 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:42.525 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:42.525 -05 000000081 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:38:42.525 -05 000000081 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:38:42.568 -05 000000095 INF: ===================Frame #385=================== 15-12-21 22:38:42.625 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:38:42.626 -05 000000085 INF: ===================Frame #389=================== 15-12-21 22:38:42.713 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:42.719 -05 000000095 INF: ===================Frame #396=================== 15-12-21 22:38:42.778 -05 000000085 INF: ===================Frame #401=================== 15-12-21 22:38:42.813 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:42.844 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:42.929 -05 000000085 INF: ===================Frame #413=================== 15-12-21 22:38:42.941 -05 000000055 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:38:43.081 -05 000000085 INF: ===================Frame #425=================== 15-12-21 22:38:43.083 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:43.094 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:43.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:43.103 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:43.151 -05 000000081 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:43.152 -05 000000081 INF: ====================================== 15-12-21 22:38:43.227 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:43.235 -05 000000085 INF: ===================Frame #437=================== 15-12-21 22:38:43.275 -05 000000095 INF: ===================Frame #440=================== 15-12-21 22:38:43.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:43.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:43.387 -05 000000085 INF: ===================Frame #449=================== 15-12-21 22:38:43.443 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:43.487 -05 000000060 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106, Registering and Extracting C044 L001 T1113=================== 15-12-21 22:38:43.494 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 16.983C:A1\r\n 15-12-21 22:38:43.494 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:43.538 -05 000000085 INF: ===================Frame #461=================== 15-12-21 22:38:43.600 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:43.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:43.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:43.649 -05 000000089 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105, Registering and Extracting C044 L001 T1106=================== 15-12-21 22:38:43.689 -05 000000085 INF: ===================Frame #473=================== 15-12-21 22:38:43.722 -05 000000075 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104, Registering and Extracting C044 L001 T1105=================== 15-12-21 22:38:43.726 -05 000000095 INF: ===================Frame #476=================== 15-12-21 22:38:43.840 -05 000000085 INF: ===================Frame #485=================== 15-12-21 22:38:43.959 -05 000000055 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:38:43.969 -05 000000095 INF: ===================Frame #495=================== 15-12-21 22:38:43.991 -05 000000085 INF: ===================Frame #497=================== 15-12-21 22:38:44.123 -05 000000095 INF: ===================Frame #507=================== 15-12-21 22:38:44.135 -05 000000071 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103, Registering and Extracting C044 L001 T1104=================== 15-12-21 22:38:44.142 -05 000000085 INF: ===================Frame #509=================== 15-12-21 22:38:44.274 -05 000000095 INF: ===================Frame #519=================== 15-12-21 22:38:44.293 -05 000000085 INF: ===================Frame #521=================== 15-12-21 22:38:44.423 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:44.425 -05 000000095 INF: ===================Frame #531=================== 15-12-21 22:38:44.443 -05 000000085 INF: ===================Frame #533=================== 15-12-21 22:38:44.500 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:38:44.500 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:44.576 -05 000000095 INF: ===================Frame #543=================== 15-12-21 22:38:44.593 -05 000000085 INF: ===================Frame #545=================== 15-12-21 22:38:44.726 -05 000000095 INF: ===================Frame #555=================== 15-12-21 22:38:44.743 -05 000000085 INF: ===================Frame #557=================== 15-12-21 22:38:44.764 -05 000000094 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102, Registering and Extracting C044 L001 T1103=================== 15-12-21 22:38:44.876 -05 000000095 INF: ===================Frame #567=================== 15-12-21 22:38:44.896 -05 000000085 INF: ===================Frame #569=================== 15-12-21 22:38:44.909 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:44.931 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:44.931 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:44.959 -05 000000055 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:38:45.027 -05 000000095 INF: ===================Frame #579=================== 15-12-21 22:38:45.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:45.047 -05 000000085 INF: ===================Frame #581=================== 15-12-21 22:38:45.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:45.054 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:45.062 -05 000000065 INF: ===================Registering and Extracting C044 L001 T1101, Registering and Extracting C044 L001 T1102=================== 15-12-21 22:38:45.086 -05 000000009 INF: ===================Registering and Extracting C044 L001 T1101=================== 15-12-21 22:38:45.159 -05 000000074 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:38:45.161 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:45.163 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:38:45.168 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:38:45.178 -05 000000095 INF: ===================Frame #591=================== 15-12-21 22:38:45.181 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:45.181 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:45.197 -05 000000085 INF: ===================Frame #592=================== 15-12-21 22:38:45.287 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:38:45.294 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:38:45.330 -05 000000095 INF: ===================Frame #603=================== 15-12-21 22:38:45.395 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:38:45.404 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:38:45.481 -05 000000095 INF: ===================Frame #615=================== 15-12-21 22:38:45.532 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:38:45.545 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:38:45.631 -05 000000095 INF: ===================Frame #627=================== 15-12-21 22:38:45.649 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:38:45.722 -05 000000085 INF: ===================Frame #634=================== 15-12-21 22:38:45.781 -05 000000095 INF: ===================Frame #639=================== 15-12-21 22:38:45.933 -05 000000095 INF: ===================Frame #651=================== 15-12-21 22:38:45.959 -05 000000055 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:38:45.978 -05 000000085 INF: ===================Frame #654=================== 15-12-21 22:38:46.084 -05 000000095 INF: ===================Frame #663=================== 15-12-21 22:38:46.175 -05 000000085 INF: ===================Frame #670=================== 15-12-21 22:38:46.235 -05 000000095 INF: ===================Frame #674=================== 15-12-21 22:38:46.359 -05 000000085 INF: ===================Frame #684=================== 15-12-21 22:38:46.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:46.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:46.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:46.532 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:46.552 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:46.552 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:46.567 -05 000000085 INF: ===================Frame #701=================== 15-12-21 22:38:46.655 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:46.678 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:46.678 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:46.719 -05 000000085 INF: ===================Frame #713=================== 15-12-21 22:38:46.811 -05 000000095 INF: ===================Frame #720=================== 15-12-21 22:38:46.869 -05 000000085 INF: ===================Frame #725=================== 15-12-21 22:38:46.955 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:38:46.959 -05 000000055 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:38:47.019 -05 000000085 INF: ===================Frame #737=================== 15-12-21 22:38:47.057 -05 000000095 INF: ===================Frame #740=================== 15-12-21 22:38:47.169 -05 000000085 INF: ===================Frame #748=================== 15-12-21 22:38:47.210 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:47.231 -05 000000095 INF: ===================Frame #753=================== 15-12-21 22:38:47.238 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.008C:A1\r\n 15-12-21 22:38:47.238 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:47.382 -05 000000095 INF: ===================Frame #765=================== 15-12-21 22:38:47.391 -05 000000085 INF: ===================Frame #766=================== 15-12-21 22:38:47.532 -05 000000095 INF: ===================Frame #777=================== 15-12-21 22:38:47.561 -05 000000085 INF: ===================Frame #779=================== 15-12-21 22:38:47.683 -05 000000095 INF: ===================Frame #789=================== 15-12-21 22:38:47.711 -05 000000085 INF: ===================Frame #791=================== 15-12-21 22:38:47.834 -05 000000095 INF: ===================Frame #801=================== 15-12-21 22:38:47.861 -05 000000085 INF: ===================Frame #803=================== 15-12-21 22:38:47.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:47.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:47.927 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:47.959 -05 000000055 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:38:47.984 -05 000000095 INF: ===================Frame #813=================== 15-12-21 22:38:48.012 -05 000000085 INF: ===================Frame #815=================== 15-12-21 22:38:48.035 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:48.112 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:48.112 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:48.134 -05 000000095 INF: ===================Frame #825=================== 15-12-21 22:38:48.164 -05 000000085 INF: ===================Frame #827=================== 15-12-21 22:38:48.213 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:48.236 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:48.236 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:48.285 -05 000000095 INF: ===================Frame #837=================== 15-12-21 22:38:48.314 -05 000000085 INF: ===================Frame #839=================== 15-12-21 22:38:48.436 -05 000000095 INF: ===================Frame #849=================== 15-12-21 22:38:48.464 -05 000000085 INF: ===================Frame #851=================== 15-12-21 22:38:48.587 -05 000000095 INF: ===================Frame #860=================== 15-12-21 22:38:48.600 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:48.614 -05 000000085 INF: ===================Frame #863=================== 15-12-21 22:38:48.673 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 17.013C:A1\r\n 15-12-21 22:38:48.673 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:48.765 -05 000000085 INF: ===================Frame #874=================== 15-12-21 22:38:48.960 -05 000000055 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:38:48.960 -05 000000095 INF: ===================Frame #890=================== 15-12-21 22:38:49.133 -05 000000085 INF: ===================Frame #904=================== 15-12-21 22:38:49.164 -05 000000095 INF: ===================Frame #906=================== 15-12-21 22:38:49.338 -05 000000085 INF: ===================Frame #920=================== 15-12-21 22:38:49.341 -05 000000095 INF: ===================Frame #920=================== 15-12-21 22:38:49.466 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:49.484 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:49.484 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:49.520 -05 000000085 INF: ===================Frame #934=================== 15-12-21 22:38:49.521 -05 000000095 INF: ===================Frame #934=================== 15-12-21 22:38:49.592 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:49.610 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:49.610 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:49.702 -05 000000095 INF: ===================Frame #949=================== 15-12-21 22:38:49.702 -05 000000085 INF: ===================Frame #949=================== 15-12-21 22:38:49.717 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:49.795 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:38:49.795 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:49.852 -05 000000085 INF: ===================Frame #961=================== 15-12-21 22:38:49.852 -05 000000095 INF: ===================Frame #961=================== 15-12-21 22:38:49.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:49.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:49.921 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:49.960 -05 000000055 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:38:50.003 -05 000000085 INF: ===================Frame #972=================== 15-12-21 22:38:50.003 -05 000000095 INF: ===================Frame #972=================== 15-12-21 22:38:50.244 -05 000000085 INF: ===================Frame #992=================== 15-12-21 22:38:50.247 -05 000000095 INF: ===================Frame #992=================== 15-12-21 22:38:50.458 -05 000000085 INF: ===================Frame #1008=================== 15-12-21 22:38:50.464 -05 000000095 INF: ===================Frame #1009=================== 15-12-21 22:38:50.614 -05 000000095 INF: ===================Frame #1021=================== 15-12-21 22:38:50.629 -05 000000085 INF: ===================Frame #1022=================== 15-12-21 22:38:50.765 -05 000000095 INF: ===================Frame #1033=================== 15-12-21 22:38:50.797 -05 000000085 INF: ===================Frame #1035=================== 15-12-21 22:38:50.916 -05 000000095 INF: ===================Frame #1045=================== 15-12-21 22:38:50.947 -05 000000085 INF: ===================Frame #1047=================== 15-12-21 22:38:50.960 -05 000000055 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:38:51.068 -05 000000095 INF: ===================Frame #1057=================== 15-12-21 22:38:51.098 -05 000000085 INF: ===================Frame #1059=================== 15-12-21 22:38:51.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:51.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:51.170 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:51.218 -05 000000095 INF: ===================Frame #1069=================== 15-12-21 22:38:51.248 -05 000000085 INF: ===================Frame #1071=================== 15-12-21 22:38:51.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:51.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:51.293 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:51.368 -05 000000095 INF: ===================Frame #1080=================== 15-12-21 22:38:51.402 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:51.402 -05 000000085 INF: ===================Frame #1083=================== 15-12-21 22:38:51.420 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:51.420 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:51.552 -05 000000085 INF: ===================Frame #1095=================== 15-12-21 22:38:51.625 -05 000000095 INF: ===================Frame #1101=================== 15-12-21 22:38:51.703 -05 000000085 INF: ===================Frame #1107=================== 15-12-21 22:38:51.775 -05 000000095 INF: ===================Frame #1113=================== 15-12-21 22:38:51.855 -05 000000085 INF: ===================Frame #1119=================== 15-12-21 22:38:51.925 -05 000000095 INF: ===================Frame #1124=================== 15-12-21 22:38:51.960 -05 000000055 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:38:52.005 -05 000000085 INF: ===================Frame #1131=================== 15-12-21 22:38:52.120 -05 000000095 INF: ===================Frame #1140=================== 15-12-21 22:38:52.155 -05 000000085 INF: ===================Frame #1143=================== 15-12-21 22:38:52.286 -05 000000095 INF: ===================Frame #1153=================== 15-12-21 22:38:52.308 -05 000000085 INF: ===================Frame #1154=================== 15-12-21 22:38:52.345 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:52.418 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.520C:A1\r\n 15-12-21 22:38:52.418 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:52.437 -05 000000095 INF: ===================Frame #1165=================== 15-12-21 22:38:52.587 -05 000000095 INF: ===================Frame #1177=================== 15-12-21 22:38:52.588 -05 000000085 INF: ===================Frame #1177=================== 15-12-21 22:38:52.640 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:52.668 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:52.668 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:52.738 -05 000000085 INF: ===================Frame #1189=================== 15-12-21 22:38:52.738 -05 000000095 INF: ===================Frame #1189=================== 15-12-21 22:38:52.773 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:52.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:52.791 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:52.888 -05 000000085 INF: ===================Frame #1201=================== 15-12-21 22:38:52.889 -05 000000095 INF: ===================Frame #1201=================== 15-12-21 22:38:52.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:52.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:52.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:52.961 -05 000000055 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:38:53.038 -05 000000085 INF: ===================Frame #1212=================== 15-12-21 22:38:53.039 -05 000000095 INF: ===================Frame #1213=================== 15-12-21 22:38:53.190 -05 000000095 INF: ===================Frame #1224=================== 15-12-21 22:38:53.245 -05 000000085 INF: ===================Frame #1229=================== 15-12-21 22:38:53.396 -05 000000085 INF: ===================Frame #1241=================== 15-12-21 22:38:53.429 -05 000000095 INF: ===================Frame #1243=================== 15-12-21 22:38:53.538 -05 000000081 INF: FPGA: Recv TDIYWAIT 15-12-21 22:38:53.539 -05 000000022 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:38:53.544 -05 000000022 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:38:53.546 -05 000000085 INF: ===================Frame #1250=================== 15-12-21 22:38:53.547 -05 000000049 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:38:53.547 -05 000000049 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:38:53.547 -05 000000049 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:38:53.548 -05 000000049 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:38:53.548 -05 000000023 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:38:53.548 -05 000000049 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:38:53.548 -05 000000023 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:38:53.548 -05 000000023 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:38:53.548 -05 000000023 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:38:53.550 -05 000000023 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:38:53.579 -05 000000095 INF: ===================Frame #1250=================== 15-12-21 22:38:53.658 -05 000000095 INF: Camera complete - got 1250 frames. 15-12-21 22:38:53.660 -05 000000095 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:38:53.671 -05 000000085 INF: Camera complete - got 1250 frames. 15-12-21 22:38:53.672 -05 000000085 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:38:53.766 -05 000000029 INF: FPGA: Recv EX1MV 15-12-21 22:38:53.766 -05 000000049 INF: Excitation Filter 1: Moved 36 steps in 218.2678 ms 15-12-21 22:38:53.766 -05 000000049 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 218.4513 ms 15-12-21 22:38:53.766 -05 000000049 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 218.5337 ms 15-12-21 22:38:53.767 -05 000000049 INF: ====================================== 15-12-21 22:38:53.777 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:53.853 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.274C:A1\r\n 15-12-21 22:38:53.853 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:53.966 -05 000000082 INF: FPGA: Recv EX2MV 15-12-21 22:38:53.967 -05 000000023 INF: Excitation Filter 2: Moved 107 steps in 418.0965 ms 15-12-21 22:38:53.967 -05 000000023 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 418.2102 ms 15-12-21 22:38:53.967 -05 000000023 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 418.3798 ms 15-12-21 22:38:53.967 -05 000000055 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:38:53.976 -05 000000023 INF: ====================================== 15-12-21 22:38:53.996 -05 000000022 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:38:54.007 -05 000000022 INF: ====================================== 15-12-21 22:38:54.160 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:54.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:54.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:54.313 -05 000000028 INF: Y Motor: Moved to 9.0764 after 16857 ms 15-12-21 22:38:54.314 -05 000000028 INF: ====================================== 15-12-21 22:38:54.379 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:54.397 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:54.397 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:54.407 -05 000000095 INF: ===================Camera TDI=================== 15-12-21 22:38:54.428 -05 000000095 INF: ====================================== 15-12-21 22:38:54.497 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:54.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:54.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:54.540 -05 000000085 INF: ===================Camera TDI=================== 15-12-21 22:38:54.571 -05 000000085 INF: ====================================== 15-12-21 22:38:54.573 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 22:38:54.576 -05 000000078 INF: ====================================== 15-12-21 22:38:54.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:54.584 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:54.585 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:54.585 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:38:54.626 -05 000000078 INF: FPGA: Recv TDICLINES 9970 15-12-21 22:38:54.626 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:38:54.678 -05 000000095 INF: FPGA: Recv TDIYERD 907649 15-12-21 22:38:54.678 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:38:54.739 -05 000000080 INF: FPGA: Recv ZADCR 37286 15-12-21 22:38:54.739 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.142. Y moved -60.304 mm 15-12-21 22:38:54.739 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:38:54.801 -05 000000063 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:38:54.801 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:38:54.801 -05 000000057 INF: TDIScan finished after 22138.1457 ms 15-12-21 22:38:54.801 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:38:54.801 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:38:54.803 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:54.833 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.324 um 15-12-21 22:38:54.833 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:54.838 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:54.842 -05 000000049 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:38:54.842 -05 000000085 INF: ===================Dither Clean Up Command=================== 15-12-21 22:38:54.843 -05 000000049 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:38:54.843 -05 000000023 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:38:54.843 -05 000000028 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:38:54.847 -05 000000028 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:38:54.847 -05 000000028 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:38:54.848 -05 000000080 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:38:54.848 -05 000000022 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:38:54.849 -05 000000080 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:38:54.849 -05 000000022 INF: ===================LFT:Extracting coords=================== 15-12-21 22:38:54.881 -05 000000049 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:38:54.882 -05 000000049 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:38:54.882 -05 000000023 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:38:54.882 -05 000000049 INF: ====================================== 15-12-21 22:38:54.888 -05 000000022 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:38:54.889 -05 000000022 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:38:54.891 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:54.891 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:54.891 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:38:54.891 -05 000000082 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:38:54.891 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:54.891 -05 000000095 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:54.892 -05 000000029 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:38:54.892 -05 000000095 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:38:54.906 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:38:54.926 -05 000000024 INF: FPGA: Recv ZSTEP 15-12-21 22:38:54.926 -05 000000024 INF: FPGA: Recv ZSEL 15-12-21 22:38:54.926 -05 000000080 INF: FPGA: Xmit ZDACW 42186\n 15-12-21 22:38:54.926 -05 000000028 INF: ====================================== 15-12-21 22:38:54.942 -05 000000023 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:38:54.943 -05 000000023 INF: ====================================== 15-12-21 22:38:54.961 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:38:54.961 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:54.967 -05 000000055 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:38:54.998 -05 000000024 INF: FPGA: Recv ZDACW 15-12-21 22:38:54.999 -05 000000080 INF: ====================================== 15-12-21 22:38:55.079 -05 000000078 INF: LFT found best fwhm score 2.77553 in 131 ms 15-12-21 22:38:55.079 -05 000000078 INF: LFT found good score at index 3253 with fwhm value 2.77553. Next cycle, cycle 45 starting Z position for top surface is at -0.164 mm FC:A, C:44,L:1,T 15-12-21 22:38:55.080 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:55.080 -05 000000078 INF: ====================================== 15-12-21 22:38:55.080 -05 000000095 INF: LFT found best fwhm score 2.89268 in 131 ms 15-12-21 22:38:55.080 -05 000000095 INF: LFT found good score at index 3381 with fwhm value 2.89268. Next cycle, cycle 45 starting Z position for top surface is at -0.164 mm FC:A, C:44,L:1,T 15-12-21 22:38:55.080 -05 000000095 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:55.080 -05 000000082 INF: LFT found best fwhm score 2.512732 in 131 ms 15-12-21 22:38:55.080 -05 000000082 INF: LFT found good score at index 2789 with fwhm value 2.512732. Next cycle, cycle 45 starting Z position for top surface is at -0.164 mm FC:A, C:44,L:1,T 15-12-21 22:38:55.080 -05 000000095 INF: ====================================== 15-12-21 22:38:55.081 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:55.081 -05 000000082 INF: ====================================== 15-12-21 22:38:55.093 -05 000000029 INF: LFT found best fwhm score 2.662861 in 143 ms 15-12-21 22:38:55.093 -05 000000029 INF: LFT found good score at index 3173 with fwhm value 2.662861. Next cycle, cycle 45 starting Z position for top surface is at -0.164 mm FC:A, C:44,L:1,T 15-12-21 22:38:55.093 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:38:55.094 -05 000000029 INF: ====================================== 15-12-21 22:38:55.095 -05 000000022 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:38:55.097 -05 000000022 INF: LFT weighted average best Z for top surface is at -0.164mm FC:A, C:44,L:1,T 15-12-21 22:38:55.097 -05 000000022 INF: ====================================== 15-12-21 22:38:55.099 -05 000000085 INF: ====================================== 15-12-21 22:38:55.105 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:55.111 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:38:55.111 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:55.111 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:38:55.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:55.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:38:55.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:55.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:38:55.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:55.112 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:38:55.113 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:38:55.113 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:38:55.114 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:38:55.114 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Waiting for image analysis, Delay 1 of 15 seconds left=================== 15-12-21 22:38:55.114 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock, Delay 1 of 15 seconds left=================== 15-12-21 22:38:55.114 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:38:55.114 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:55.116 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:38:55.118 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:55.120 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:38:55.120 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 1=================== 15-12-21 22:38:55.123 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface=================== 15-12-21 22:38:55.124 -05 000000074 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205=================== 15-12-21 22:38:55.124 -05 000000094 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205=================== 15-12-21 22:38:55.124 -05 000000071 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206=================== 15-12-21 22:38:55.124 -05 000000065 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205=================== 15-12-21 22:38:55.124 -05 000000009 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205=================== 15-12-21 22:38:55.124 -05 000000089 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:38:55.124 -05 000000060 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1208=================== 15-12-21 22:38:55.124 -05 000000075 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206=================== 15-12-21 22:38:55.159 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:38:55.160 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:38:55.163 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:38:55.168 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:38:55.170 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:38:55.172 -05 000000057 INF: Compensator: Remaining IntoPath 15-12-21 22:38:55.173 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:38:55.273 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:38:55.307 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:38:55.308 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:38:55.323 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:55.323 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:38:55.324 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:55.324 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -160.9 um, section = B_1 15-12-21 22:38:55.327 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:55.328 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:55.329 -05 000000095 INF: ===================MoveEmissionFilters=================== 15-12-21 22:38:55.330 -05 000000029 INF: ===================Move X,Y=================== 15-12-21 22:38:55.330 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:55.334 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:38:55.334 -05 000000029 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:38:55.334 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:38:55.335 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:38:55.335 -05 000000085 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:38:55.335 -05 000000085 INF: Z Motor: Moving to -0.1626 mm, started at -0.1609 mm 15-12-21 22:38:55.335 -05 000000085 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:38:55.335 -05 000000022 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:38:55.338 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:38:55.340 -05 000000080 INF: ===================Move X Motor without settling=================== 15-12-21 22:38:55.340 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:38:55.340 -05 000000080 INF: X Motor: Xmit PR VM\n 15-12-21 22:38:55.340 -05 000000022 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:38:55.342 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:38:55.343 -05 000000078 INF: ===================Move Y Motor without settling=================== 15-12-21 22:38:55.343 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:38:55.343 -05 000000078 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:38:55.350 -05 000000078 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:38:55.350 -05 000000024 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:38:55.351 -05 000000090 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:38:55.351 -05 000000028 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:38:55.355 -05 000000082 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:38:55.355 -05 000000078 INF: Y Motor: Xmit 1G\n 15-12-21 22:38:55.355 -05 000000024 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:38:55.355 -05 000000090 INF: ====================================== 15-12-21 22:38:55.359 -05 000000024 INF: ====================================== 15-12-21 22:38:55.359 -05 000000028 INF: ====================================== 15-12-21 22:38:55.364 -05 000000082 INF: ====================================== 15-12-21 22:38:55.367 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:38:55.370 -05 000000024 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:38:55.370 -05 000000028 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:38:55.373 -05 000000090 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:38:55.377 -05 000000024 INF: ====================================== 15-12-21 22:38:55.377 -05 000000028 INF: ====================================== 15-12-21 22:38:55.380 -05 000000090 INF: ====================================== 15-12-21 22:38:55.384 -05 000000063 INF: ====================================== 15-12-21 22:38:55.384 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:38:55.398 -05 000000028 INF: FPGA: Recv ZTRG 15-12-21 22:38:55.398 -05 000000082 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:38:55.401 -05 000000078 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:38:55.401 -05 000000085 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:38:55.401 -05 000000022 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:38:55.401 -05 000000082 INF: ====================================== 15-12-21 22:38:55.403 -05 000000080 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:38:55.404 -05 000000078 INF: Y Motor: Recv 1G\r\n 15-12-21 22:38:55.404 -05 000000080 INF: X Motor: Xmit PR VI\n 15-12-21 22:38:55.404 -05 000000049 INF: ====================================== 15-12-21 22:38:55.405 -05 000000078 INF: Y Motor: Xmit 1D\n 15-12-21 22:38:55.405 -05 000000022 INF: ====================================== 15-12-21 22:38:55.408 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:38:55.417 -05 000000023 INF: ====================================== 15-12-21 22:38:55.429 -05 000000095 INF: ====================================== 15-12-21 22:38:55.494 -05 000000078 INF: Y Motor: Recv 1D\r\n 15-12-21 22:38:55.494 -05 000000090 INF: FPGA: Recv ZYT 15-12-21 22:38:55.494 -05 000000085 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:38:55.496 -05 000000080 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:38:55.496 -05 000000085 INF: FPGA: Xmit ZMV 42618\n 15-12-21 22:38:55.496 -05 000000080 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:38:55.496 -05 000000078 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:38:55.496 -05 000000080 INF: X Motor: Moving to 17.1670 mm @15.000 mm/sec, started at 13.6436 mm 15-12-21 22:38:55.497 -05 000000080 INF: X Motor: Xmit MA -17135\n 15-12-21 22:38:55.497 -05 000000078 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:38:55.551 -05 000000022 INF: FPGA: Recv @LOG Trigger Camera 15-12-21 22:38:55.551 -05 000000022 INF: FPGA: Recv ZMV 15-12-21 22:38:55.551 -05 000000030 INF: FPGA: Trigger Camera 15-12-21 22:38:55.551 -05 000000085 INF: Z Motor: MoveAndTrigger 'ZMV' command took 55.4336 ms 15-12-21 22:38:55.552 -05 000000085 INF: FPGA: Xmit ZDACR\n 15-12-21 22:38:55.553 -05 000000080 INF: X Motor: Recv MA -17135\r\n> 15-12-21 22:38:55.553 -05 000000080 INF: X Motor: WaitUntilStopped 60235 15-12-21 22:38:55.613 -05 000000023 INF: FPGA: Recv ZDACR 42618 15-12-21 22:38:55.614 -05 000000085 INF: Z Motor: MoveAndTrigger took 279.4909 ms w/comms 15-12-21 22:38:55.614 -05 000000085 INF: Z Motor: After move to -0.1626, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:38:55.614 -05 000000085 INF: Z Motor: MoveAbsStepped took 279.6229 ms 15-12-21 22:38:55.616 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:55.645 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:38:55.647 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:55.647 -05 000000023 INF: ===================Camera Arm TDI=================== 15-12-21 22:38:55.655 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:55.656 -05 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:38:55.670 -05 000000082 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:38:55.671 -05 000000082 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:38:55.737 -05 000000063 INF: FPGA: Recv ZSEL 15-12-21 22:38:55.738 -05 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:38:55.739 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:55.804 -05 000000082 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:38:55.804 -05 000000082 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:38:55.804 -05 000000082 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:38:55.859 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:55.865 -05 000000028 INF: FPGA: Recv ZSTEP 15-12-21 22:38:55.866 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:55.902 -05 000000082 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:38:55.903 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:55.910 -05 000000082 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:38:55.911 -05 000000082 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:38:55.911 -05 000000082 INF: Z Motor: Arming to move to -0.1226 mm 15-12-21 22:38:55.911 -05 000000082 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:38:55.924 -05 000000095 INF: FPGA: Recv ZYT 15-12-21 22:38:55.924 -05 000000082 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907644 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:38:55.924 -05 000000082 INF: FPGA: Xmit ZARM 32132\n 15-12-21 22:38:55.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:55.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:55.938 -05 000000055 INF: ===================WaitCommand=================== 15-12-21 22:38:55.938 -05 000000055 INF: WaitCommand(15000) end 15-12-21 22:38:55.939 -05 000000055 INF: ====================================== 15-12-21 22:38:55.941 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:55.942 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:55.957 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Deblock=================== 15-12-21 22:38:55.961 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle=================== 15-12-21 22:38:55.962 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:38:55.963 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:38:55.963 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:38:55.963 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:55.987 -05 000000024 INF: FPGA: Recv ZARM 15-12-21 22:38:55.987 -05 000000082 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 62.7158 ms 15-12-21 22:38:55.987 -05 000000082 INF: Z Motor: ArmAbsStepped took 76.2823 ms 15-12-21 22:38:55.988 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:38:55.991 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:56.060 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:56.067 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent CWM (8)=================== 15-12-21 22:38:56.067 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:38:56.067 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:38:56.068 -05 000000082 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:38:56.069 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:56.108 -05 000000082 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:38:56.119 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:38:56.121 -05 000000082 INF: ====================================== 15-12-21 22:38:56.195 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:56.240 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:38:56.240 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:56.344 -05 000000080 INF: X Motor: Xmit PR ER\n 15-12-21 22:38:56.469 -05 000000080 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:38:56.469 -05 000000080 INF: X Motor: Moved to 17.1665 after 916 ms 15-12-21 22:38:56.470 -05 000000080 INF: ====================================== 15-12-21 22:38:56.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:56.583 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:56.583 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:56.712 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:38:56.768 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:38:56.768 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:56.876 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:56.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:56.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:57.045 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:38:57.130 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:38:57.130 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:57.239 -05 000000023 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:38:57.240 -05 000000023 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:38:57.240 -05 000000023 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:38:57.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:38:57.261 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:38:57.261 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:57.315 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:38:57.324 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 8, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 95, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:38:57.415 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:38:57.481 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:38:57.481 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 22:38:57.481 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8), Aspirating port PortB=================== 15-12-21 22:38:57.519 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:38:57.535 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.099C:A1\r\n 15-12-21 22:38:57.535 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:57.581 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P18240R\r 15-12-21 22:38:57.689 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:57.797 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:57.877 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:58.127 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:58.169 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:58.197 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:58.197 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:58.197 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:58.302 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:58.316 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:58.316 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:58.421 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:38:58.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:58.438 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:58.447 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:58.563 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:58.726 -05 000000023 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:38:58.726 -05 000000023 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:38:58.726 -05 000000023 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:38:58.728 -05 000000023 INF: ====================================== 15-12-21 22:38:58.731 -05 000000085 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:38:58.741 -05 000000085 INF: ====================================== 15-12-21 22:38:58.813 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:58.873 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:58.988 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:38:59.000 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.882C:A1\r\n 15-12-21 22:38:59.000 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:59.001 -05 000000078 INF: Y Motor: Moved to 70.6886 after 3505 ms 15-12-21 22:38:59.002 -05 000000078 INF: ====================================== 15-12-21 22:38:59.009 -05 000000029 INF: ===================Move X,Y=================== 15-12-21 22:38:59.011 -05 000000029 INF: ====================================== 15-12-21 22:38:59.012 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:38:59.019 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:59.020 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:38:59.087 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:38:59.088 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:38:59.123 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:59.151 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:59.151 -05 000000056 INF: FPGA: Recv ZFREQCL 15-12-21 22:38:59.151 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:38:59.152 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:59.152 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:38:59.258 -05 000000049 INF: FPGA: Recv TDIYERD 7068853 15-12-21 22:38:59.268 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068853 counts (70.689 mm) 15-12-21 22:38:59.271 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:59.272 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:59.274 -05 000000022 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:38:59.274 -05 000000022 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:38:59.276 -05 000000028 INF: ===================TDI FPGA Arm=================== 15-12-21 22:38:59.277 -05 000000028 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:59.278 -05 000000028 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:38:59.278 -05 000000028 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:38:59.311 -05 000000049 INF: FPGA: Recv TDIYPOS 15-12-21 22:38:59.312 -05 000000022 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:38:59.312 -05 000000028 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:59.313 -05 000000022 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:38:59.313 -05 000000022 INF: ====================================== 15-12-21 22:38:59.315 -05 000000028 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:38:59.315 -05 000000028 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:38:59.396 -05 000000063 INF: FPGA: Recv TDIYARM3 15-12-21 22:38:59.397 -05 000000028 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:38:59.399 -05 000000028 INF: ===================TDI FPGA Arm=================== 15-12-21 22:38:59.403 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:59.403 -05 000000028 INF: ====================================== 15-12-21 22:38:59.406 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:38:59.410 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:38:59.411 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:59.412 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:59.417 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:59.422 -05 000000068 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:38:59.422 -05 000000056 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:38:59.422 -05 000000068 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:38:59.422 -05 000000068 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:38:59.422 -05 000000068 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:38:59.422 -05 000000068 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:38:59.422 -05 000000056 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:38:59.422 -05 000000056 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:38:59.422 -05 000000056 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:38:59.428 -05 000000056 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:38:59.452 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:59.577 -05 000000078 INF: FPGA: Recv EX1MV 15-12-21 22:38:59.578 -05 000000068 INF: Excitation Filter 1: Moved -36 steps in 155.6015 ms 15-12-21 22:38:59.578 -05 000000068 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 155.7585 ms 15-12-21 22:38:59.578 -05 000000068 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 155.8907 ms 15-12-21 22:38:59.579 -05 000000068 INF: ====================================== 15-12-21 22:38:59.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:38:59.702 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:38:59.703 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:38:59.703 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:59.763 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:38:59.829 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:38:59.830 -05 000000029 INF: FPGA: Recv EX2MV 15-12-21 22:38:59.830 -05 000000056 INF: Excitation Filter 2: Moved -107 steps in 408.1528 ms 15-12-21 22:38:59.830 -05 000000056 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 408.2651 ms 15-12-21 22:38:59.830 -05 000000056 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 408.3846 ms 15-12-21 22:38:59.832 -05 000000056 INF: ====================================== 15-12-21 22:38:59.834 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:59.861 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:38:59.877 -05 000000049 INF: ===================Move Y Motor without settling=================== 15-12-21 22:38:59.877 -05 000000095 INF: ===================Camera TDI=================== 15-12-21 22:38:59.878 -05 000000028 INF: ===================FPGA Z Wait=================== 15-12-21 22:38:59.878 -05 000000063 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:38:59.878 -05 000000049 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:38:59.878 -05 000000049 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:38:59.879 -05 000000063 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:38:59.880 -05 000000049 INF: Y Motor: Xmit 1G\n 15-12-21 22:38:59.880 -05 000000063 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:38:59.882 -05 000000095 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:38:59.883 -05 000000028 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:38:59.884 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 22:38:59.884 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 22:38:59.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:38:59.891 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:38:59.954 -05 000000049 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:38:59.955 -05 000000049 INF: Y Motor: Recv 1G\r\n 15-12-21 22:38:59.956 -05 000000049 INF: Y Motor: Xmit 1D\n 15-12-21 22:39:00.013 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:00.014 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:00.016 -05 000000049 INF: Y Motor: Recv 1D\r\n 15-12-21 22:39:00.017 -05 000000049 INF: Y Motor: Recv *407662\r\n 15-12-21 22:39:00.019 -05 000000049 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:39:00.133 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:00.158 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:00.158 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:00.202 -05 000000078 INF: FPGA: Recv ZWAIT 15-12-21 22:39:00.203 -05 000000028 INF: ====================================== 15-12-21 22:39:00.297 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:00.327 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:39:00.327 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:00.381 -05 000000090 INF: ===================Frame #4=================== 15-12-21 22:39:00.381 -05 000000056 INF: ===================Frame #4=================== 15-12-21 22:39:00.383 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:00.452 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:00.511 -05 000000075 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:00.530 -05 000000011 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1209=================== 15-12-21 22:39:00.570 -05 000000090 INF: ===================Frame #19=================== 15-12-21 22:39:00.573 -05 000000056 INF: ===================Frame #19=================== 15-12-21 22:39:00.624 -05 000000065 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:00.630 -05 000000066 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1210=================== 15-12-21 22:39:00.659 -05 000000071 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:00.702 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:00.720 -05 000000090 INF: ===================Frame #31=================== 15-12-21 22:39:00.723 -05 000000056 INF: ===================Frame #31=================== 15-12-21 22:39:00.730 -05 000000038 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1211=================== 15-12-21 22:39:00.763 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:00.818 -05 000000094 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:00.830 -05 000000077 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1212=================== 15-12-21 22:39:00.864 -05 000000074 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:00.870 -05 000000090 INF: ===================Frame #43=================== 15-12-21 22:39:00.873 -05 000000056 INF: ===================Frame #43=================== 15-12-21 22:39:00.930 -05 000000040 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1213=================== 15-12-21 22:39:01.001 -05 000000009 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:01.013 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:01.021 -05 000000090 INF: ===================Frame #55=================== 15-12-21 22:39:01.023 -05 000000056 INF: ===================Frame #55=================== 15-12-21 22:39:01.054 -05 000000051 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1214=================== 15-12-21 22:39:01.073 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:01.139 -05 000000060 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:01.153 -05 000000027 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1215=================== 15-12-21 22:39:01.160 -05 000000089 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:01.171 -05 000000090 INF: ===================Frame #67=================== 15-12-21 22:39:01.173 -05 000000056 INF: ===================Frame #67=================== 15-12-21 22:39:01.292 -05 000000048 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207, Registering and Extracting C044 L001 T1216=================== 15-12-21 22:39:01.322 -05 000000090 INF: ===================Frame #79=================== 15-12-21 22:39:01.323 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:01.323 -05 000000056 INF: ===================Frame #79=================== 15-12-21 22:39:01.406 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:01.472 -05 000000090 INF: ===================Frame #90=================== 15-12-21 22:39:01.473 -05 000000056 INF: ===================Frame #90=================== 15-12-21 22:39:01.476 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:01.508 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:01.508 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:01.626 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:01.656 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:01.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:01.706 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:01.813 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:01.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:01.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:01.934 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:02.063 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:02.161 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:02.161 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent CWM (8)=================== 15-12-21 22:39:02.290 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:39:02.356 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 22:39:02.356 -05 000000062 INF: Current Position of Pump is: 18240 15-12-21 22:39:02.356 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:39:02.456 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:39:02.507 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:02.607 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:02.635 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:02.688 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:02.691 -05 000000090 INF: ===================Frame #187=================== 15-12-21 22:39:02.703 -05 000000056 INF: ===================Frame #188=================== 15-12-21 22:39:02.770 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.666C:A1\r\n 15-12-21 22:39:02.770 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:02.841 -05 000000090 INF: ===================Frame #199=================== 15-12-21 22:39:02.922 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:02.992 -05 000000090 INF: ===================Frame #211=================== 15-12-21 22:39:03.008 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:03.008 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:03.009 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:39:03.009 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:03.143 -05 000000090 INF: ===================Frame #223=================== 15-12-21 22:39:03.294 -05 000000090 INF: ===================Frame #234=================== 15-12-21 22:39:03.321 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:39:03.345 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:39:03.345 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:03.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:03.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:03.525 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:03.676 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:03.742 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:39:03.742 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:03.853 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:03.853 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:03.854 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:03.855 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:03.874 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:03.874 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:03.981 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:04.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:04.009 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:04.152 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 307ms 15-12-21 22:39:04.162 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:04.209 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:04.209 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Selecting Reagent USB (6)=================== 15-12-21 22:39:04.209 -05 000000062 INF: Valve B2: Go to position 6 15-12-21 22:39:04.209 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:39:04.210 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.836C:A1\r\n 15-12-21 22:39:04.210 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:04.271 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 8\r 15-12-21 22:39:04.271 -05 000000062 INF: Valve B2: 33.273 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:39:04.271 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 8 to 6 15-12-21 22:39:04.271 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC6\r 15-12-21 22:39:04.272 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:39:04.272 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:39:04.305 -05 000000056 INF: ===================Frame #314=================== 15-12-21 22:39:04.547 -05 000000090 INF: ===================Frame #334=================== 15-12-21 22:39:04.810 -05 000000056 INF: ===================Frame #354=================== 15-12-21 22:39:04.834 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 6\r 15-12-21 22:39:04.834 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:04.834 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Opening shutoff valve=================== 15-12-21 22:39:04.834 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:04.897 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:39:04.897 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:05.004 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:39:05.021 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:39:05.021 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:05.064 -05 000000090 INF: ===================Frame #374=================== 15-12-21 22:39:05.084 -05 000000056 INF: ===================Frame #376=================== 15-12-21 22:39:05.134 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:05.318 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:05.319 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 22:39:05.319 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:05.332 -05 000000056 INF: ===================Frame #395=================== 15-12-21 22:39:05.362 -05 000000090 INF: ===================Frame #398=================== 15-12-21 22:39:05.385 -05 000000066 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206, Registering and Extracting C044 L001 T1207=================== 15-12-21 22:39:05.396 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:05.412 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 6, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 140, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Buffer Wash", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:39:05.444 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:05.447 -05 000000011 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205, Registering and Extracting C044 L001 T1206=================== 15-12-21 22:39:05.459 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:05.459 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:05.487 -05 000000056 INF: ===================Frame #408=================== 15-12-21 22:39:05.496 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:39:05.570 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:05.576 -05 000000090 INF: ===================Frame #415=================== 15-12-21 22:39:05.582 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`18240 (0x03)\r\n(0xFF) 15-12-21 22:39:05.582 -05 000000062 INF: Current Position of Pump is: 18240 15-12-21 22:39:05.583 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6), Aspirating port PortB=================== 15-12-21 22:39:05.646 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 22:39:05.646 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:05.682 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P26880R\r 15-12-21 22:39:05.711 -05 000000056 INF: ===================Frame #426=================== 15-12-21 22:39:05.726 -05 000000090 INF: ===================Frame #427=================== 15-12-21 22:39:05.755 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:05.771 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:05.771 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:05.771 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:05.871 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:05.875 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:05.877 -05 000000090 INF: ===================Frame #439=================== 15-12-21 22:39:05.898 -05 000000056 INF: ===================Frame #440=================== 15-12-21 22:39:05.900 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:05.900 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:05.957 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:06.028 -05 000000090 INF: ===================Frame #451=================== 15-12-21 22:39:06.092 -05 000000056 INF: ===================Frame #456=================== 15-12-21 22:39:06.150 -05 000000038 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204, Registering and Extracting C044 L001 T1205=================== 15-12-21 22:39:06.178 -05 000000090 INF: ===================Frame #462=================== 15-12-21 22:39:06.207 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:06.267 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:06.281 -05 000000056 INF: ===================Frame #471=================== 15-12-21 22:39:06.282 -05 000000077 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203, Registering and Extracting C044 L001 T1204=================== 15-12-21 22:39:06.283 -05 000000040 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202, Registering and Extracting C044 L001 T1203=================== 15-12-21 22:39:06.354 -05 000000051 INF: ===================Registering and Extracting C044 L001 T1201, Registering and Extracting C044 L001 T1202=================== 15-12-21 22:39:06.432 -05 000000056 INF: ===================Frame #482=================== 15-12-21 22:39:06.453 -05 000000090 INF: ===================Frame #484=================== 15-12-21 22:39:06.517 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:06.579 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:06.608 -05 000000027 INF: ===================Registering and Extracting C044 L001 T1201=================== 15-12-21 22:39:06.635 -05 000000056 INF: ===================Frame #499=================== 15-12-21 22:39:06.654 -05 000000090 INF: ===================Frame #500=================== 15-12-21 22:39:06.700 -05 000000048 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:39:06.778 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:06.785 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:39:06.785 -05 000000056 INF: ===================Frame #510=================== 15-12-21 22:39:06.829 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:06.834 -05 000000090 INF: ===================Frame #514=================== 15-12-21 22:39:06.893 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:06.893 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:06.901 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:39:06.984 -05 000000056 INF: ===================Frame #526=================== 15-12-21 22:39:06.993 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:06.999 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:39:07.002 -05 000000090 INF: ===================Frame #528=================== 15-12-21 22:39:07.130 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:07.135 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:39:07.151 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:07.158 -05 000000056 INF: ===================Frame #540=================== 15-12-21 22:39:07.193 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:07.196 -05 000000090 INF: ===================Frame #543=================== 15-12-21 22:39:07.205 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:07.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:07.206 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:07.244 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:07.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:07.331 -05 000000056 INF: ===================Frame #553=================== 15-12-21 22:39:07.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:07.333 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:07.347 -05 000000090 INF: ===================Frame #555=================== 15-12-21 22:39:07.437 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:07.455 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:07.456 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:07.456 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:07.482 -05 000000056 INF: ===================Frame #566=================== 15-12-21 22:39:07.498 -05 000000090 INF: ===================Frame #567=================== 15-12-21 22:39:07.517 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:07.651 -05 000000090 INF: ===================Frame #579=================== 15-12-21 22:39:07.692 -05 000000056 INF: ===================Frame #582=================== 15-12-21 22:39:07.767 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:07.801 -05 000000090 INF: ===================Frame #591=================== 15-12-21 22:39:07.828 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:07.871 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:07.876 -05 000000056 INF: ===================Frame #597=================== 15-12-21 22:39:07.891 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.668C:A1\r\n 15-12-21 22:39:07.891 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:07.952 -05 000000090 INF: ===================Frame #603=================== 15-12-21 22:39:08.027 -05 000000056 INF: ===================Frame #609=================== 15-12-21 22:39:08.078 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:08.104 -05 000000090 INF: ===================Frame #615=================== 15-12-21 22:39:08.141 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:08.168 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:39:08.177 -05 000000056 INF: ===================Frame #621=================== 15-12-21 22:39:08.254 -05 000000090 INF: ===================Frame #627=================== 15-12-21 22:39:08.329 -05 000000056 INF: ===================Frame #632=================== 15-12-21 22:39:08.391 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:08.405 -05 000000090 INF: ===================Frame #639=================== 15-12-21 22:39:08.451 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:08.539 -05 000000056 INF: ===================Frame #649=================== 15-12-21 22:39:08.555 -05 000000090 INF: ===================Frame #650=================== 15-12-21 22:39:08.682 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:08.691 -05 000000056 INF: ===================Frame #661=================== 15-12-21 22:39:08.701 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:08.705 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:08.705 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:08.764 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:08.810 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:08.827 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:08.827 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:08.841 -05 000000056 INF: ===================Frame #673=================== 15-12-21 22:39:08.900 -05 000000090 INF: ===================Frame #678=================== 15-12-21 22:39:08.936 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:08.953 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:08.953 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:08.991 -05 000000056 INF: ===================Frame #685=================== 15-12-21 22:39:09.014 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:09.076 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:09.086 -05 000000090 INF: ===================Frame #692=================== 15-12-21 22:39:09.141 -05 000000056 INF: ===================Frame #697=================== 15-12-21 22:39:09.259 -05 000000090 INF: ===================Frame #706=================== 15-12-21 22:39:09.292 -05 000000056 INF: ===================Frame #709=================== 15-12-21 22:39:09.313 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:09.326 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:09.388 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:09.388 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.358C:A1\r\n 15-12-21 22:39:09.388 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:09.426 -05 000000090 INF: ===================Frame #719=================== 15-12-21 22:39:09.442 -05 000000056 INF: ===================Frame #720=================== 15-12-21 22:39:09.576 -05 000000090 INF: ===================Frame #731=================== 15-12-21 22:39:09.638 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:09.700 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:09.718 -05 000000056 INF: ===================Frame #742=================== 15-12-21 22:39:09.727 -05 000000090 INF: ===================Frame #743=================== 15-12-21 22:39:09.877 -05 000000090 INF: ===================Frame #755=================== 15-12-21 22:39:09.896 -05 000000056 INF: ===================Frame #756=================== 15-12-21 22:39:09.950 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:10.011 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:10.031 -05 000000090 INF: ===================Frame #767=================== 15-12-21 22:39:10.072 -05 000000056 INF: ===================Frame #770=================== 15-12-21 22:39:10.173 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:10.182 -05 000000090 INF: ===================Frame #779=================== 15-12-21 22:39:10.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:10.201 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:10.244 -05 000000056 INF: ===================Frame #784=================== 15-12-21 22:39:10.261 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:10.301 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:10.324 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:10.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:10.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:10.333 -05 000000090 INF: ===================Frame #791=================== 15-12-21 22:39:10.415 -05 000000056 INF: ===================Frame #797=================== 15-12-21 22:39:10.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:10.449 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:10.449 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:10.484 -05 000000090 INF: ===================Frame #803=================== 15-12-21 22:39:10.565 -05 000000056 INF: ===================Frame #809=================== 15-12-21 22:39:10.574 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:10.634 -05 000000090 INF: ===================Frame #815=================== 15-12-21 22:39:10.636 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:10.715 -05 000000056 INF: ===================Frame #821=================== 15-12-21 22:39:10.755 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:10.787 -05 000000090 INF: ===================Frame #827=================== 15-12-21 22:39:10.823 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 22:39:10.823 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:10.865 -05 000000056 INF: ===================Frame #833=================== 15-12-21 22:39:10.886 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:10.937 -05 000000090 INF: ===================Frame #839=================== 15-12-21 22:39:10.948 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:11.016 -05 000000056 INF: ===================Frame #845=================== 15-12-21 22:39:11.088 -05 000000090 INF: ===================Frame #851=================== 15-12-21 22:39:11.166 -05 000000056 INF: ===================Frame #857=================== 15-12-21 22:39:11.200 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:11.241 -05 000000090 INF: ===================Frame #862=================== 15-12-21 22:39:11.259 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:11.317 -05 000000056 INF: ===================Frame #869=================== 15-12-21 22:39:11.467 -05 000000056 INF: ===================Frame #881=================== 15-12-21 22:39:11.509 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:11.573 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:11.596 -05 000000090 INF: ===================Frame #891=================== 15-12-21 22:39:11.617 -05 000000056 INF: ===================Frame #892=================== 15-12-21 22:39:11.675 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:11.698 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:11.698 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:11.747 -05 000000090 INF: ===================Frame #903=================== 15-12-21 22:39:11.797 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:11.823 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:11.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:11.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:11.884 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:11.884 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Pumping Reagent USB (6)=================== 15-12-21 22:39:11.898 -05 000000090 INF: ===================Frame #915=================== 15-12-21 22:39:11.906 -05 000000056 INF: ===================Frame #915=================== 15-12-21 22:39:11.925 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:11.946 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:11.946 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:11.984 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:39:12.049 -05 000000090 INF: ===================Frame #927=================== 15-12-21 22:39:12.056 -05 000000056 INF: ===================Frame #927=================== 15-12-21 22:39:12.073 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 22:39:12.073 -05 000000062 INF: Current Position of Pump is: 45120 15-12-21 22:39:12.073 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:39:12.173 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:39:12.200 -05 000000090 INF: ===================Frame #939=================== 15-12-21 22:39:12.206 -05 000000056 INF: ===================Frame #939=================== 15-12-21 22:39:12.259 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:12.353 -05 000000090 INF: ===================Frame #950=================== 15-12-21 22:39:12.356 -05 000000056 INF: ===================Frame #951=================== 15-12-21 22:39:12.359 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:12.383 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:12.507 -05 000000056 INF: ===================Frame #963=================== 15-12-21 22:39:12.633 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:12.652 -05 000000090 INF: ===================Frame #974=================== 15-12-21 22:39:12.658 -05 000000056 INF: ===================Frame #975=================== 15-12-21 22:39:12.694 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:12.694 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:12.694 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash, Closing shutoff valve=================== 15-12-21 22:39:12.694 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:12.761 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:39:12.761 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:12.809 -05 000000056 INF: ===================Frame #987=================== 15-12-21 22:39:12.829 -05 000000090 INF: ===================Frame #988=================== 15-12-21 22:39:12.868 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:39:12.882 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:39:12.882 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:12.959 -05 000000056 INF: ===================Frame #999=================== 15-12-21 22:39:12.984 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:12.997 -05 000000090 INF: ===================Frame #1002=================== 15-12-21 22:39:13.009 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:39:13.009 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:13.110 -05 000000056 INF: ===================Frame #1010=================== 15-12-21 22:39:13.113 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:13.114 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:13.115 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Buffer Wash=================== 15-12-21 22:39:13.115 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle=================== 15-12-21 22:39:13.116 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:13.117 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:13.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:13.170 -05 000000090 INF: ===================Frame #1015=================== 15-12-21 22:39:13.321 -05 000000090 INF: ===================Frame #1027=================== 15-12-21 22:39:13.364 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:13.383 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:13.383 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:13.444 -05 000000056 INF: ===================Frame #1037=================== 15-12-21 22:39:13.473 -05 000000090 INF: ===================Frame #1039=================== 15-12-21 22:39:13.486 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:13.508 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:13.508 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:13.595 -05 000000056 INF: ===================Frame #1049=================== 15-12-21 22:39:13.606 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:13.623 -05 000000090 INF: ===================Frame #1051=================== 15-12-21 22:39:13.632 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:13.632 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:13.746 -05 000000056 INF: ===================Frame #1061=================== 15-12-21 22:39:13.773 -05 000000090 INF: ===================Frame #1063=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer waited 760ms 15-12-21 22:39:13.885 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:13.896 -05 000000056 INF: ===================Frame #1073=================== 15-12-21 22:39:13.925 -05 000000090 INF: ===================Frame #1075=================== 15-12-21 22:39:13.944 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:13.944 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Selecting Reagent IMT (1)=================== 15-12-21 22:39:13.944 -05 000000062 INF: Valve B2: Go to position 1 15-12-21 22:39:13.944 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:39:14.006 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 6\r 15-12-21 22:39:14.006 -05 000000062 INF: Valve B2: 9.735 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:39:14.006 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 6 to 1 15-12-21 22:39:14.006 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC1\r 15-12-21 22:39:14.007 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:39:14.007 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:39:14.046 -05 000000056 INF: ===================Frame #1085=================== 15-12-21 22:39:14.076 -05 000000090 INF: ===================Frame #1087=================== 15-12-21 22:39:14.197 -05 000000056 INF: ===================Frame #1096=================== 15-12-21 22:39:14.228 -05 000000090 INF: ===================Frame #1099=================== 15-12-21 22:39:14.379 -05 000000090 INF: ===================Frame #1111=================== 15-12-21 22:39:14.443 -05 000000056 INF: ===================Frame #1116=================== 15-12-21 22:39:14.490 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:14.506 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.962C:A1\r\n 15-12-21 22:39:14.506 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:14.529 -05 000000090 INF: ===================Frame #1123=================== 15-12-21 22:39:14.620 -05 000000056 INF: ===================Frame #1130=================== 15-12-21 22:39:14.680 -05 000000090 INF: ===================Frame #1135=================== 15-12-21 22:39:14.790 -05 000000056 INF: ===================Frame #1143=================== 15-12-21 22:39:14.831 -05 000000090 INF: ===================Frame #1147=================== 15-12-21 22:39:14.854 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:14.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:14.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:14.941 -05 000000056 INF: ===================Frame #1155=================== 15-12-21 22:39:14.977 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:14.982 -05 000000090 INF: ===================Frame #1159=================== 15-12-21 22:39:15.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:15.005 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:15.066 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 1\r 15-12-21 22:39:15.066 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:15.067 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:39:15.093 -05 000000056 INF: ===================Frame #1167=================== 15-12-21 22:39:15.107 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:15.129 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:39:15.129 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:15.132 -05 000000090 INF: ===================Frame #1170=================== 15-12-21 22:39:15.232 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:15.244 -05 000000056 INF: ===================Frame #1179=================== 15-12-21 22:39:15.253 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:15.253 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:15.350 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:39:15.380 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:39:15.380 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:15.395 -05 000000056 INF: ===================Frame #1191=================== 15-12-21 22:39:15.480 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:15.494 -05 000000090 INF: ===================Frame #1199=================== 15-12-21 22:39:15.504 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:39:15.504 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:15.545 -05 000000056 INF: ===================Frame #1203=================== 15-12-21 22:39:15.604 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:15.604 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:39:15.604 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:15.645 -05 000000090 INF: ===================Frame #1211=================== 15-12-21 22:39:15.689 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:15.695 -05 000000056 INF: ===================Frame #1215=================== 15-12-21 22:39:15.696 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 1, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 110, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:39:15.789 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:39:15.797 -05 000000090 INF: ===================Frame #1223=================== 15-12-21 22:39:15.845 -05 000000056 INF: ===================Frame #1227=================== 15-12-21 22:39:15.878 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`45120 (0x03)\r\n(0xFF) 15-12-21 22:39:15.878 -05 000000062 INF: Current Position of Pump is: 45120 15-12-21 22:39:15.878 -05 000000062 INF: Dispensing because using MultiAspirate and syringe is full 15-12-21 22:39:15.922 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:15.941 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.005C:A1\r\n 15-12-21 22:39:15.941 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:15.947 -05 000000090 INF: ===================Frame #1235=================== 15-12-21 22:39:15.978 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1OR\r 15-12-21 22:39:15.996 -05 000000056 INF: ===================Frame #1239=================== 15-12-21 22:39:16.064 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:16.098 -05 000000090 INF: ===================Frame #1247=================== 15-12-21 22:39:16.146 -05 000000056 INF: ===================Frame #1250=================== 15-12-21 22:39:16.164 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:16.187 -05 000000082 INF: FPGA: Recv TDIYWAIT 15-12-21 22:39:16.188 -05 000000063 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:39:16.194 -05 000000063 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:39:16.196 -05 000000024 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:39:16.196 -05 000000081 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:39:16.196 -05 000000024 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:39:16.196 -05 000000024 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:39:16.199 -05 000000024 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:39:16.199 -05 000000081 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:39:16.199 -05 000000024 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:39:16.199 -05 000000081 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:39:16.199 -05 000000081 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:39:16.204 -05 000000081 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:39:16.250 -05 000000090 INF: ===================Frame #1250=================== 15-12-21 22:39:16.253 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:16.340 -05 000000056 INF: Camera complete - got 1250 frames. 15-12-21 22:39:16.342 -05 000000056 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:39:16.377 -05 000000029 INF: FPGA: Recv EX1MV 15-12-21 22:39:16.377 -05 000000024 INF: Excitation Filter 1: Moved 36 steps in 177.5635 ms 15-12-21 22:39:16.377 -05 000000024 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 180.5518 ms 15-12-21 22:39:16.377 -05 000000024 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 180.6399 ms 15-12-21 22:39:16.378 -05 000000024 INF: ====================================== 15-12-21 22:39:16.396 -05 000000090 INF: Camera complete - got 1250 frames. 15-12-21 22:39:16.399 -05 000000090 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:39:16.465 -05 000000056 INF: ===================Camera TDI=================== 15-12-21 22:39:16.481 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:16.486 -05 000000056 INF: ====================================== 15-12-21 22:39:16.502 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:16.502 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:16.503 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:16.563 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:16.608 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:16.616 -05 000000090 INF: ===================Camera TDI=================== 15-12-21 22:39:16.624 -05 000000082 INF: FPGA: Recv EX2MV 15-12-21 22:39:16.624 -05 000000081 INF: Excitation Filter 2: Moved 107 steps in 424.7668 ms 15-12-21 22:39:16.624 -05 000000081 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 424.9106 ms 15-12-21 22:39:16.624 -05 000000081 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 425.0395 ms 15-12-21 22:39:16.624 -05 000000081 INF: ====================================== 15-12-21 22:39:16.626 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:16.626 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:16.630 -05 000000063 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:39:16.634 -05 000000063 INF: ====================================== 15-12-21 22:39:16.656 -05 000000090 INF: ====================================== 15-12-21 22:39:16.663 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V10000A0R\r 15-12-21 22:39:16.675 -05 000000095 INF: ===================Camera TDI=================== 15-12-21 22:39:16.682 -05 000000095 INF: ====================================== 15-12-21 22:39:16.752 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:16.759 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:16.759 -05 000000049 INF: Y Motor: Moved to 9.0764 after 16742 ms 15-12-21 22:39:16.760 -05 000000049 INF: ====================================== 15-12-21 22:39:16.762 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:16.764 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:16.765 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:16.765 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:39:16.811 -05 000000022 INF: FPGA: Recv TDICLINES 10000 15-12-21 22:39:16.811 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:39:16.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:16.813 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:16.873 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:16.904 -05 000000049 INF: FPGA: Recv TDIYERD 907643 15-12-21 22:39:16.904 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:39:16.956 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:16.962 -05 000000024 INF: FPGA: Recv ZADCR 37521 15-12-21 22:39:16.979 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.143. Y moved -60.304 mm 15-12-21 22:39:16.996 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:39:17.023 -05 000000078 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:39:17.023 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:39:17.039 -05 000000057 INF: TDIScan finished after 21732.5883 ms 15-12-21 22:39:17.039 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:39:17.040 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:39:17.125 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.160 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.012 um 15-12-21 22:39:17.161 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.177 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.186 -05 000000028 INF: ===================Dither Clean Up Command=================== 15-12-21 22:39:17.187 -05 000000049 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:39:17.210 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:17.210 -05 000000049 INF: ===================LFT:Extracting coords=================== 15-12-21 22:39:17.210 -05 000000081 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:39:17.210 -05 000000056 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:39:17.210 -05 000000024 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:39:17.210 -05 000000055 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:39:17.219 -05 000000081 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:39:17.228 -05 000000056 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:39:17.228 -05 000000055 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:39:17.238 -05 000000055 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:39:17.269 -05 000000081 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:39:17.270 -05 000000081 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:39:17.270 -05 000000024 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:39:17.272 -05 000000081 INF: ====================================== 15-12-21 22:39:17.272 -05 000000049 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:39:17.279 -05 000000049 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:39:17.280 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:17.280 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:17.286 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:17.307 -05 000000082 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:39:17.307 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:39:17.307 -05 000000063 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:39:17.308 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:17.308 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:17.316 -05 000000029 INF: FPGA: Recv ZSEL 15-12-21 22:39:17.317 -05 000000029 INF: FPGA: Recv ZSTEP 15-12-21 22:39:17.317 -05 000000056 INF: FPGA: Xmit ZDACW 42618\n 15-12-21 22:39:17.317 -05 000000023 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:39:17.317 -05 000000055 INF: ====================================== 15-12-21 22:39:17.337 -05 000000024 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:39:17.338 -05 000000024 INF: ====================================== 15-12-21 22:39:17.374 -05 000000095 INF: FPGA: Recv ZDACW 15-12-21 22:39:17.375 -05 000000056 INF: ====================================== 15-12-21 22:39:17.541 -05 000000063 INF: LFT found best fwhm score 2.925631 in 195 ms 15-12-21 22:39:17.542 -05 000000063 INF: LFT found good score at index 4381 with fwhm value 2.925631. Next cycle, cycle 45 starting Z position for top surface is at -0.165 mm FC:A, C:44,L:2,T 15-12-21 22:39:17.542 -05 000000082 INF: LFT found best fwhm score 2.849926 in 196 ms 15-12-21 22:39:17.542 -05 000000082 INF: LFT found good score at index 401 with fwhm value 2.849926. Next cycle, cycle 45 starting Z position for top surface is at -0.166 mm FC:A, C:44,L:2,T 15-12-21 22:39:17.542 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:17.543 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:17.543 -05 000000063 INF: ====================================== 15-12-21 22:39:17.543 -05 000000082 INF: ====================================== 15-12-21 22:39:17.549 -05 000000090 INF: LFT found best fwhm score 2.908741 in 203 ms 15-12-21 22:39:17.549 -05 000000090 INF: LFT found good score at index 5489 with fwhm value 2.908741. Next cycle, cycle 45 starting Z position for top surface is at -0.165 mm FC:A, C:44,L:2,T 15-12-21 22:39:17.550 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:17.550 -05 000000023 INF: LFT found best fwhm score 3.064511 in 194 ms 15-12-21 22:39:17.550 -05 000000023 INF: LFT found good score at index 4065 with fwhm value 3.064511. Next cycle, cycle 45 starting Z position for top surface is at -0.165 mm FC:A, C:44,L:2,T 15-12-21 22:39:17.550 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:17.551 -05 000000090 INF: ====================================== 15-12-21 22:39:17.555 -05 000000023 INF: ====================================== 15-12-21 22:39:17.560 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:17.561 -05 000000049 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:39:17.562 -05 000000049 INF: LFT weighted average best Z for top surface is at -0.165mm FC:A, C:44,L:2,T 15-12-21 22:39:17.563 -05 000000049 INF: ====================================== 15-12-21 22:39:17.567 -05 000000028 INF: ====================================== 15-12-21 22:39:17.568 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.570 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:39:17.570 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.570 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:39:17.570 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.572 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:39:17.572 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.572 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:39:17.572 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.573 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:39:17.573 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:39:17.574 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:39:17.574 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:39:17.575 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Waiting for image analysis=================== 15-12-21 22:39:17.575 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:39:17.575 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:39:17.575 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:39:17.575 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:39:17.576 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:17.576 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:39:17.576 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:39:17.578 -05 000000048 INF: ===================Registering and Extracting C044 L002 T1101=================== 15-12-21 22:39:17.579 -05 000000027 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102=================== 15-12-21 22:39:17.579 -05 000000051 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104=================== 15-12-21 22:39:17.579 -05 000000040 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104=================== 15-12-21 22:39:17.580 -05 000000077 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105=================== 15-12-21 22:39:17.580 -05 000000038 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106=================== 15-12-21 22:39:17.591 -05 000000066 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1107=================== 15-12-21 22:39:17.592 -05 000000011 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1107, Registering and Extracting C044 L002 T1108=================== 15-12-21 22:39:17.603 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.604 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:39:17.604 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:17.604 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -162.6 um, section = B_1 15-12-21 22:39:17.612 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:39:17.613 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:39:17.618 -05 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:39:17.618 -05 000000090 INF: ===================MoveEmissionFilters=================== 15-12-21 22:39:17.619 -05 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:39:17.619 -05 000000068 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:39:17.620 -05 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:39:17.620 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:39:17.620 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:39:17.620 -05 000000085 INF: ===================Move X,Y=================== 15-12-21 22:39:17.620 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:39:17.621 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:39:17.621 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:39:17.621 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:39:17.622 -05 000000085 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:39:17.622 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:39:17.623 -05 000000022 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:39:17.623 -05 000000024 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:39:17.623 -05 000000063 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:39:17.623 -05 000000022 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:39:17.623 -05 000000029 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:39:17.623 -05 000000028 INF: ===================Move Y Motor without settling=================== 15-12-21 22:39:17.623 -05 000000082 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:39:17.623 -05 000000095 INF: ===================Move X Motor without settling=================== 15-12-21 22:39:17.623 -05 000000028 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:39:17.624 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:39:17.624 -05 000000095 INF: X Motor: Xmit PR VM\n 15-12-21 22:39:17.624 -05 000000055 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:39:17.624 -05 000000028 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:39:17.624 -05 000000082 INF: ====================================== 15-12-21 22:39:17.624 -05 000000055 INF: ====================================== 15-12-21 22:39:17.625 -05 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:39:17.631 -05 000000024 INF: ====================================== 15-12-21 22:39:17.632 -05 000000022 INF: ====================================== 15-12-21 22:39:17.632 -05 000000029 INF: ====================================== 15-12-21 22:39:17.633 -05 000000028 INF: Y Motor: Xmit 1G\n 15-12-21 22:39:17.634 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:39:17.634 -05 000000063 INF: ====================================== 15-12-21 22:39:17.634 -05 000000055 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:39:17.635 -05 000000055 INF: ====================================== 15-12-21 22:39:17.635 -05 000000023 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:39:17.635 -05 000000078 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:39:17.637 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:39:17.637 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:17.637 -05 000000056 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:39:17.637 -05 000000023 INF: ====================================== 15-12-21 22:39:17.638 -05 000000022 INF: ===================Camera Arm TDI=================== 15-12-21 22:39:17.638 -05 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:39:17.643 -05 000000082 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:39:17.644 -05 000000078 INF: ====================================== 15-12-21 22:39:17.644 -05 000000082 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:39:17.644 -05 000000056 INF: ====================================== 15-12-21 22:39:17.644 -05 000000081 INF: ====================================== 15-12-21 22:39:17.645 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:17.645 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:39:17.646 -05 000000049 INF: ====================================== 15-12-21 22:39:17.647 -05 000000090 INF: ====================================== 15-12-21 22:39:17.743 -05 000000049 INF: FPGA: Recv ZSEL 15-12-21 22:39:17.744 -05 000000028 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:39:17.745 -05 000000028 INF: Y Motor: Recv 1G\r\n 15-12-21 22:39:17.745 -05 000000095 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:39:17.745 -05 000000095 INF: X Motor: Xmit PR VI\n 15-12-21 22:39:17.748 -05 000000082 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:39:17.748 -05 000000028 INF: Y Motor: Xmit 1D\n 15-12-21 22:39:17.750 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:17.754 -05 000000082 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:39:17.754 -05 000000082 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:39:17.755 -05 000000082 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:39:17.814 -05 000000055 INF: FPGA: Recv ZSTEP 15-12-21 22:39:17.815 -05 000000028 INF: Y Motor: Recv 1D\r\n 15-12-21 22:39:17.815 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:17.816 -05 000000028 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:39:17.817 -05 000000095 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:39:17.817 -05 000000095 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:39:17.817 -05 000000095 INF: X Motor: Moving to 17.9390 mm @15.000 mm/sec, started at 17.1665 mm 15-12-21 22:39:17.817 -05 000000028 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:39:17.818 -05 000000095 INF: X Motor: Xmit MA -16819\n 15-12-21 22:39:17.854 -05 000000082 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:39:17.859 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:17.866 -05 000000082 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:39:17.867 -05 000000082 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:39:17.867 -05 000000082 INF: Z Motor: Arming to move to -0.1226 mm 15-12-21 22:39:17.867 -05 000000082 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:39:17.888 -05 000000095 INF: X Motor: Recv MA -16819\r\n> 15-12-21 22:39:17.888 -05 000000095 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:39:17.897 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:17.934 -05 000000024 INF: FPGA: Recv ZYT 15-12-21 22:39:17.935 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:17.935 -05 000000082 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907641 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:39:17.935 -05 000000082 INF: FPGA: Xmit ZARM 32132\n 15-12-21 22:39:18.056 -05 000000049 INF: FPGA: Recv ZARM 15-12-21 22:39:18.085 -05 000000082 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 150.6817 ms 15-12-21 22:39:18.085 -05 000000082 INF: Z Motor: ArmAbsStepped took 218.8046 ms 15-12-21 22:39:18.087 -05 000000082 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:18.092 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:39:18.097 -05 000000082 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:39:18.099 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:39:18.103 -05 000000082 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:39:18.104 -05 000000082 INF: ===================TDI Scan Setup=================== 15-12-21 22:39:18.108 -05 000000082 INF: ====================================== 15-12-21 22:39:18.200 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:18.220 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:18.284 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:18.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:18.299 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:18.442 -05 000000095 INF: X Motor: Xmit PR ER\n 15-12-21 22:39:18.500 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:18.508 -05 000000095 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:39:18.508 -05 000000095 INF: X Motor: Moved to 17.9380 after 619 ms 15-12-21 22:39:18.509 -05 000000095 INF: ====================================== 15-12-21 22:39:18.534 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:18.561 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:18.564 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.104C:A1\r\n 15-12-21 22:39:18.564 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:18.677 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:18.748 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:18.748 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:18.811 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:18.936 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:18.938 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:19.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:19.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:19.188 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:19.230 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:19.453 -05 000000022 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:39:19.453 -05 000000022 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:39:19.453 -05 000000022 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:39:19.480 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:19.543 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:19.607 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:19.670 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.789C:A1\r\n 15-12-21 22:39:19.670 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:19.793 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:19.854 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:20.104 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:20.167 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:20.390 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:20.500 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:20.503 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:20.503 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:20.575 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:20.630 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:20.700 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:20.700 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:20.807 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:20.822 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:20.822 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:20.825 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:20.887 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:21.048 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:21.062 -05 000000022 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:39:21.062 -05 000000022 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:39:21.062 -05 000000022 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:39:21.064 -05 000000022 INF: ====================================== 15-12-21 22:39:21.072 -05 000000068 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:39:21.074 -05 000000068 INF: ====================================== 15-12-21 22:39:21.088 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:39:21.088 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:21.137 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:21.197 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:21.447 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:21.508 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:21.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1), Aspirating port PortB=================== 15-12-21 22:39:21.510 -05 000000028 INF: Y Motor: Moved to 70.6885 after 3693 ms 15-12-21 22:39:21.510 -05 000000028 INF: ====================================== 15-12-21 22:39:21.513 -05 000000085 INF: ===================Move X,Y=================== 15-12-21 22:39:21.515 -05 000000085 INF: ====================================== 15-12-21 22:39:21.523 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:39:21.525 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:21.525 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:39:21.571 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:39:21.572 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:39:21.608 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P21120R\r 15-12-21 22:39:21.633 -05 000000028 INF: FPGA: Recv ZFREQCL 15-12-21 22:39:21.634 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:39:21.635 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:21.635 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:39:21.695 -05 000000028 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:39:21.695 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:39:21.696 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:21.696 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:39:21.701 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:39:21.702 -05 000000068 INF: ===================TDI FPGA Arm=================== 15-12-21 22:39:21.702 -05 000000090 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:39:21.702 -05 000000090 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:39:21.708 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:39:21.716 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:39:21.725 -05 000000068 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:39:21.766 -05 000000095 INF: FPGA: Recv TDIYPOS 15-12-21 22:39:21.769 -05 000000090 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:39:21.772 -05 000000090 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:39:21.772 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:39:21.776 -05 000000090 INF: ====================================== 15-12-21 22:39:21.779 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:39:21.779 -05 000000068 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:39:21.796 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:21.819 -05 000000023 INF: FPGA: Recv TDIYARM3 15-12-21 22:39:21.820 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:39:21.823 -05 000000068 INF: ===================TDI FPGA Arm=================== 15-12-21 22:39:21.827 -05 000000068 INF: ====================================== 15-12-21 22:39:21.830 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:39:21.837 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:21.838 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:21.839 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:21.840 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:21.841 -05 000000023 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:39:21.841 -05 000000049 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:39:21.841 -05 000000023 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:39:21.841 -05 000000023 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:39:21.841 -05 000000023 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:39:21.841 -05 000000023 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:39:21.841 -05 000000049 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:39:21.841 -05 000000049 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:39:21.841 -05 000000049 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:39:21.843 -05 000000049 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:39:21.902 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:22.044 -05 000000055 INF: FPGA: Recv EX1MV 15-12-21 22:39:22.044 -05 000000023 INF: Excitation Filter 1: Moved -36 steps in 202.8785 ms 15-12-21 22:39:22.044 -05 000000023 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 203.0262 ms 15-12-21 22:39:22.044 -05 000000023 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 203.1608 ms 15-12-21 22:39:22.045 -05 000000023 INF: ====================================== 15-12-21 22:39:22.115 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:22.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:22.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:22.196 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:22.250 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:22.251 -05 000000078 INF: FPGA: Recv EX2MV 15-12-21 22:39:22.251 -05 000000049 INF: Excitation Filter 2: Moved -107 steps in 409.4937 ms 15-12-21 22:39:22.251 -05 000000049 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 409.6099 ms 15-12-21 22:39:22.251 -05 000000049 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 409.6928 ms 15-12-21 22:39:22.252 -05 000000049 INF: ====================================== 15-12-21 22:39:22.253 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:22.277 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:22.278 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:22.278 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:22.281 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:22.287 -05 000000085 INF: ===================Camera TDI=================== 15-12-21 22:39:22.288 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:39:22.288 -05 000000022 INF: ===================FPGA Z Wait=================== 15-12-21 22:39:22.288 -05 000000068 INF: ===================Move Y Motor without settling=================== 15-12-21 22:39:22.288 -05 000000022 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:39:22.288 -05 000000068 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:39:22.388 -05 000000068 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:39:22.389 -05 000000028 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:39:22.389 -05 000000085 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:39:22.390 -05 000000028 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:39:22.391 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:39:22.392 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 22:39:22.463 -05 000000068 INF: Y Motor: Xmit 1G\n 15-12-21 22:39:22.528 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:22.532 -05 000000068 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:39:22.533 -05 000000068 INF: Y Motor: Recv 1G\r\n 15-12-21 22:39:22.534 -05 000000068 INF: Y Motor: Xmit 1D\n 15-12-21 22:39:22.583 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:22.584 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:22.585 -05 000000068 INF: Y Motor: Recv 1D\r\n 15-12-21 22:39:22.586 -05 000000068 INF: Y Motor: Recv *407662\r\n 15-12-21 22:39:22.587 -05 000000068 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:39:22.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:22.649 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:22.804 -05 000000095 INF: FPGA: Recv ZWAIT 15-12-21 22:39:22.805 -05 000000022 INF: ====================================== 15-12-21 22:39:22.834 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:22.872 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:22.922 -05 000000078 INF: ===================Frame #1=================== 15-12-21 22:39:23.011 -05 000000027 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1107=================== 15-12-21 22:39:23.059 -05 000000080 INF: ===================Frame #12=================== 15-12-21 22:39:23.072 -05 000000078 INF: ===================Frame #13=================== 15-12-21 22:39:23.090 -05 000000040 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106=================== 15-12-21 22:39:23.106 -05 000000060 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1109, Registering and Extracting C044 L002 T1110=================== 15-12-21 22:39:23.106 -05 000000089 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1109, Registering and Extracting C044 L002 T1110=================== 15-12-21 22:39:23.112 -05 000000051 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1109=================== 15-12-21 22:39:23.122 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:23.145 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:23.182 -05 000000077 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106=================== 15-12-21 22:39:23.206 -05 000000075 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111=================== 15-12-21 22:39:23.206 -05 000000071 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111, Registering and Extracting C044 L002 T1112=================== 15-12-21 22:39:23.223 -05 000000078 INF: ===================Frame #24=================== 15-12-21 22:39:23.242 -05 000000080 INF: ===================Frame #26=================== 15-12-21 22:39:23.256 -05 000000048 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111=================== 15-12-21 22:39:23.307 -05 000000094 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111, Registering and Extracting C044 L002 T1113=================== 15-12-21 22:39:23.328 -05 000000038 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111=================== 15-12-21 22:39:23.395 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:23.406 -05 000000065 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111, Registering and Extracting C044 L002 T1114=================== 15-12-21 22:39:23.442 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:23.445 -05 000000080 INF: ===================Frame #42=================== 15-12-21 22:39:23.454 -05 000000078 INF: ===================Frame #43=================== 15-12-21 22:39:23.614 -05 000000078 INF: ===================Frame #55=================== 15-12-21 22:39:23.643 -05 000000011 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111=================== 15-12-21 22:39:23.677 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:23.701 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:23.706 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 60.416C:A1\r\n 15-12-21 22:39:23.706 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:23.715 -05 000000009 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111, Registering and Extracting C044 L002 T1115=================== 15-12-21 22:39:23.739 -05 000000080 INF: ===================Frame #65=================== 15-12-21 22:39:23.755 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:23.777 -05 000000078 INF: ===================Frame #68=================== 15-12-21 22:39:23.896 -05 000000080 INF: ===================Frame #78=================== 15-12-21 22:39:23.959 -05 000000066 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111=================== 15-12-21 22:39:24.005 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:24.016 -05 000000074 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111, Registering and Extracting C044 L002 T1116=================== 15-12-21 22:39:24.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:24.062 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:24.116 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:24.116 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:24.248 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:24.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:24.303 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:24.312 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:24.401 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:24.455 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:24.473 -05 000000080 INF: ===================Frame #123=================== 15-12-21 22:39:24.521 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:24.521 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:24.561 -05 000000078 INF: ===================Frame #130=================== 15-12-21 22:39:24.625 -05 000000080 INF: ===================Frame #135=================== 15-12-21 22:39:24.651 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:24.707 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:24.776 -05 000000080 INF: ===================Frame #147=================== 15-12-21 22:39:24.788 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:24.835 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.772C:A1\r\n 15-12-21 22:39:24.835 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:24.959 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:24.961 -05 000000080 INF: ===================Frame #162=================== 15-12-21 22:39:24.967 -05 000000078 INF: ===================Frame #162=================== 15-12-21 22:39:25.030 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:25.280 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:25.329 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:25.402 -05 000000078 INF: ===================Frame #197=================== 15-12-21 22:39:25.552 -05 000000078 INF: ===================Frame #209=================== 15-12-21 22:39:25.579 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:25.641 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:25.704 -05 000000078 INF: ===================Frame #221=================== 15-12-21 22:39:25.783 -05 000000080 INF: ===================Frame #227=================== 15-12-21 22:39:25.857 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:25.858 -05 000000078 INF: ===================Frame #233=================== 15-12-21 22:39:25.891 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:25.911 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:25.911 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:25.934 -05 000000080 INF: ===================Frame #239=================== 15-12-21 22:39:25.966 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:26.009 -05 000000078 INF: ===================Frame #245=================== 15-12-21 22:39:26.034 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:26.085 -05 000000080 INF: ===================Frame #251=================== 15-12-21 22:39:26.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:26.095 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:26.161 -05 000000078 INF: ===================Frame #257=================== 15-12-21 22:39:26.202 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:26.216 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:26.236 -05 000000080 INF: ===================Frame #263=================== 15-12-21 22:39:26.283 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:26.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:26.284 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:26.313 -05 000000078 INF: ===================Frame #269=================== 15-12-21 22:39:26.385 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:26.387 -05 000000080 INF: ===================Frame #275=================== 15-12-21 22:39:26.409 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.999C:A1\r\n 15-12-21 22:39:26.409 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:26.463 -05 000000078 INF: ===================Frame #281=================== 15-12-21 22:39:26.533 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:26.537 -05 000000080 INF: ===================Frame #287=================== 15-12-21 22:39:26.595 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:26.614 -05 000000078 INF: ===================Frame #293=================== 15-12-21 22:39:26.688 -05 000000080 INF: ===================Frame #298=================== 15-12-21 22:39:26.764 -05 000000078 INF: ===================Frame #305=================== 15-12-21 22:39:26.845 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:26.905 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:26.916 -05 000000078 INF: ===================Frame #316=================== 15-12-21 22:39:27.155 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:27.218 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:27.248 -05 000000080 INF: ===================Frame #343=================== 15-12-21 22:39:27.399 -05 000000080 INF: ===================Frame #355=================== 15-12-21 22:39:27.445 -05 000000060 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106, Registering and Extracting C044 L002 T1111=================== 15-12-21 22:39:27.468 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:27.506 -05 000000078 INF: ===================Frame #363=================== 15-12-21 22:39:27.512 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:27.531 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:27.550 -05 000000080 INF: ===================Frame #367=================== 15-12-21 22:39:27.585 -05 000000089 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105, Registering and Extracting C044 L002 T1106=================== 15-12-21 22:39:27.599 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:27.599 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:27.658 -05 000000078 INF: ===================Frame #375=================== 15-12-21 22:39:27.701 -05 000000080 INF: ===================Frame #379=================== 15-12-21 22:39:27.715 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:27.781 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:27.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:27.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:27.808 -05 000000078 INF: ===================Frame #387=================== 15-12-21 22:39:27.842 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:27.852 -05 000000080 INF: ===================Frame #390=================== 15-12-21 22:39:27.886 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:27.905 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:27.905 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:27.959 -05 000000078 INF: ===================Frame #399=================== 15-12-21 22:39:28.037 -05 000000094 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104, Registering and Extracting C044 L002 T1105=================== 15-12-21 22:39:28.092 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:28.111 -05 000000078 INF: ===================Frame #411=================== 15-12-21 22:39:28.154 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:28.162 -05 000000080 INF: ===================Frame #415=================== 15-12-21 22:39:28.261 -05 000000078 INF: ===================Frame #423=================== 15-12-21 22:39:28.312 -05 000000080 INF: ===================Frame #427=================== 15-12-21 22:39:28.404 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:28.413 -05 000000078 INF: ===================Frame #435=================== 15-12-21 22:39:28.463 -05 000000080 INF: ===================Frame #439=================== 15-12-21 22:39:28.464 -05 000000071 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103, Registering and Extracting C044 L002 T1104=================== 15-12-21 22:39:28.464 -05 000000075 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102, Registering and Extracting C044 L002 T1103=================== 15-12-21 22:39:28.465 -05 000000065 INF: ===================Registering and Extracting C044 L002 T1101, Registering and Extracting C044 L002 T1102=================== 15-12-21 22:39:28.467 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:28.563 -05 000000078 INF: ===================Frame #447=================== 15-12-21 22:39:28.614 -05 000000080 INF: ===================Frame #451=================== 15-12-21 22:39:28.713 -05 000000078 INF: ===================Frame #459=================== 15-12-21 22:39:28.717 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:28.724 -05 000000074 INF: ===================Registering and Extracting C044 L002 T1101=================== 15-12-21 22:39:28.734 -05 000000009 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:39:28.765 -05 000000080 INF: ===================Frame #463=================== 15-12-21 22:39:28.772 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:28.779 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:28.781 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:39:28.832 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:28.864 -05 000000078 INF: ===================Frame #471=================== 15-12-21 22:39:28.880 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:28.888 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:39:28.904 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 59.991C:A1\r\n 15-12-21 22:39:28.904 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:28.915 -05 000000080 INF: ===================Frame #475=================== 15-12-21 22:39:28.992 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:28.997 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:39:29.015 -05 000000078 INF: ===================Frame #482=================== 15-12-21 22:39:29.029 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:29.066 -05 000000080 INF: ===================Frame #487=================== 15-12-21 22:39:29.096 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:29.096 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent IMT (1)=================== 15-12-21 22:39:29.114 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:29.120 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:39:29.131 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:29.153 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:29.153 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:29.196 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:39:29.216 -05 000000080 INF: ===================Frame #498=================== 15-12-21 22:39:29.228 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:29.255 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:29.278 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 22:39:29.278 -05 000000062 INF: Current Position of Pump is: 21120 15-12-21 22:39:29.278 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:39:29.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:29.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:29.377 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:29.378 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:39:29.404 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:29.404 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:29.444 -05 000000078 INF: ===================Frame #516=================== 15-12-21 22:39:29.464 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:29.564 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:29.648 -05 000000080 INF: ===================Frame #533=================== 15-12-21 22:39:29.650 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:29.684 -05 000000078 INF: ===================Frame #535=================== 15-12-21 22:39:29.799 -05 000000080 INF: ===================Frame #544=================== 15-12-21 22:39:29.837 -05 000000078 INF: ===================Frame #547=================== 15-12-21 22:39:29.900 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:29.963 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:29.963 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:29.964 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:39:29.964 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:29.987 -05 000000078 INF: ===================Frame #559=================== 15-12-21 22:39:30.026 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:39:30.026 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:30.044 -05 000000080 INF: ===================Frame #564=================== 15-12-21 22:39:30.134 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:30.140 -05 000000078 INF: ===================Frame #571=================== 15-12-21 22:39:30.214 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.871C:A1\r\n 15-12-21 22:39:30.214 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:30.245 -05 000000080 INF: ===================Frame #580=================== 15-12-21 22:39:30.258 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:39:30.291 -05 000000078 INF: ===================Frame #583=================== 15-12-21 22:39:30.318 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:39:30.339 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:39:30.339 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:30.420 -05 000000080 INF: ===================Frame #594=================== 15-12-21 22:39:30.441 -05 000000078 INF: ===================Frame #595=================== 15-12-21 22:39:30.447 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:30.463 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:39:30.463 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:30.563 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:30.564 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:30.565 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:30.566 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:39:30.566 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:39:30.567 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°, FC temperature to 65°=================== 15-12-21 22:39:30.620 -05 000000080 INF: ===================Frame #608=================== 15-12-21 22:39:30.620 -05 000000078 INF: ===================Frame #607=================== 15-12-21 22:39:30.729 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:65.00\r 15-12-21 22:39:30.816 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:39:30.816 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:30.817 -05 000000078 INF: ===================Frame #625=================== 15-12-21 22:39:30.826 -05 000000080 INF: ===================Frame #626=================== 15-12-21 22:39:30.967 -05 000000078 INF: ===================Frame #637=================== 15-12-21 22:39:31.215 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:31.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:31.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:31.293 -05 000000078 INF: ===================Frame #663=================== 15-12-21 22:39:31.361 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 22:39:31.370 -05 000000080 INF: ===================Frame #669=================== 15-12-21 22:39:31.383 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:39:31.383 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:31.443 -05 000000078 INF: ===================Frame #674=================== 15-12-21 22:39:31.487 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:31.488 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:39:31.489 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:39:31.492 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:39:31.496 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 65°=================== 15-12-21 22:39:31.498 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:31.498 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:31.500 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:31.503 -05 000000062 INF: WaitCommand(25000) start 15-12-21 22:39:31.506 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 25 of 25 seconds left=================== 15-12-21 22:39:31.514 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:31.514 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:31.520 -05 000000080 INF: ===================Frame #681=================== 15-12-21 22:39:31.617 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:31.634 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:39:31.634 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:31.671 -05 000000080 INF: ===================Frame #692=================== 15-12-21 22:39:31.740 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:31.758 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:31.758 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:31.962 -05 000000078 INF: ===================Frame #715=================== 15-12-21 22:39:31.981 -05 000000080 INF: ===================Frame #717=================== 15-12-21 22:39:32.112 -05 000000078 INF: ===================Frame #727=================== 15-12-21 22:39:32.131 -05 000000080 INF: ===================Frame #729=================== 15-12-21 22:39:32.262 -05 000000078 INF: ===================Frame #739=================== 15-12-21 22:39:32.281 -05 000000080 INF: ===================Frame #741=================== 15-12-21 22:39:32.412 -05 000000078 INF: ===================Frame #751=================== 15-12-21 22:39:32.431 -05 000000080 INF: ===================Frame #753=================== 15-12-21 22:39:32.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:32.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 24 of 25 seconds left=================== 15-12-21 22:39:32.562 -05 000000078 INF: ===================Frame #763=================== 15-12-21 22:39:32.581 -05 000000080 INF: ===================Frame #764=================== 15-12-21 22:39:32.713 -05 000000078 INF: ===================Frame #775=================== 15-12-21 22:39:32.827 -05 000000080 INF: ===================Frame #784=================== 15-12-21 22:39:32.863 -05 000000078 INF: ===================Frame #787=================== 15-12-21 22:39:32.982 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:33.000 -05 000000080 INF: ===================Frame #798=================== 15-12-21 22:39:33.006 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:33.006 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:33.013 -05 000000078 INF: ===================Frame #799=================== 15-12-21 22:39:33.105 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:33.130 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:33.130 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:33.163 -05 000000078 INF: ===================Frame #810=================== 15-12-21 22:39:33.169 -05 000000080 INF: ===================Frame #811=================== 15-12-21 22:39:33.230 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:33.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:33.257 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:33.319 -05 000000080 INF: ===================Frame #823=================== 15-12-21 22:39:33.469 -05 000000080 INF: ===================Frame #835=================== 15-12-21 22:39:33.485 -05 000000078 INF: ===================Frame #836=================== 15-12-21 22:39:33.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:33.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 23 of 25 seconds left=================== 15-12-21 22:39:33.619 -05 000000080 INF: ===================Frame #846=================== 15-12-21 22:39:33.667 -05 000000078 INF: ===================Frame #850=================== 15-12-21 22:39:33.829 -05 000000080 INF: ===================Frame #863=================== 15-12-21 22:39:33.837 -05 000000078 INF: ===================Frame #864=================== 15-12-21 22:39:33.979 -05 000000080 INF: ===================Frame #875=================== 15-12-21 22:39:34.002 -05 000000078 INF: ===================Frame #877=================== 15-12-21 22:39:34.004 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:34.066 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 61.881C:A1\r\n 15-12-21 22:39:34.066 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:34.129 -05 000000080 INF: ===================Frame #887=================== 15-12-21 22:39:34.152 -05 000000078 INF: ===================Frame #889=================== 15-12-21 22:39:34.279 -05 000000080 INF: ===================Frame #899=================== 15-12-21 22:39:34.302 -05 000000078 INF: ===================Frame #900=================== 15-12-21 22:39:34.429 -05 000000080 INF: ===================Frame #911=================== 15-12-21 22:39:34.486 -05 000000078 INF: ===================Frame #915=================== 15-12-21 22:39:34.487 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:34.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:34.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 22 of 25 seconds left=================== 15-12-21 22:39:34.565 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:34.565 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:34.579 -05 000000080 INF: ===================Frame #922=================== 15-12-21 22:39:34.636 -05 000000078 INF: ===================Frame #927=================== 15-12-21 22:39:34.673 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:34.692 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:34.692 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:34.786 -05 000000078 INF: ===================Frame #939=================== 15-12-21 22:39:34.789 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:34.806 -05 000000080 INF: ===================Frame #940=================== 15-12-21 22:39:34.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:34.816 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:34.936 -05 000000078 INF: ===================Frame #951=================== 15-12-21 22:39:34.975 -05 000000080 INF: ===================Frame #954=================== 15-12-21 22:39:35.086 -05 000000078 INF: ===================Frame #962=================== 15-12-21 22:39:35.142 -05 000000080 INF: ===================Frame #967=================== 15-12-21 22:39:35.292 -05 000000080 INF: ===================Frame #979=================== 15-12-21 22:39:35.299 -05 000000078 INF: ===================Frame #979=================== 15-12-21 22:39:35.318 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:35.378 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.951C:A1\r\n 15-12-21 22:39:35.378 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:35.442 -05 000000080 INF: ===================Frame #991=================== 15-12-21 22:39:35.449 -05 000000078 INF: ===================Frame #991=================== 15-12-21 22:39:35.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:35.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 21 of 25 seconds left=================== 15-12-21 22:39:35.592 -05 000000080 INF: ===================Frame #1002=================== 15-12-21 22:39:35.599 -05 000000078 INF: ===================Frame #1003=================== 15-12-21 22:39:35.749 -05 000000078 INF: ===================Frame #1015=================== 15-12-21 22:39:35.791 -05 000000080 INF: ===================Frame #1018=================== 15-12-21 22:39:35.899 -05 000000078 INF: ===================Frame #1027=================== 15-12-21 22:39:35.957 -05 000000080 INF: ===================Frame #1031=================== 15-12-21 22:39:36.041 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:36.049 -05 000000078 INF: ===================Frame #1039=================== 15-12-21 22:39:36.063 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:36.063 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:36.108 -05 000000080 INF: ===================Frame #1043=================== 15-12-21 22:39:36.165 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:36.190 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:36.190 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:36.199 -05 000000078 INF: ===================Frame #1050=================== 15-12-21 22:39:36.258 -05 000000080 INF: ===================Frame #1055=================== 15-12-21 22:39:36.292 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:36.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:36.312 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:36.409 -05 000000080 INF: ===================Frame #1067=================== 15-12-21 22:39:36.437 -05 000000078 INF: ===================Frame #1069=================== 15-12-21 22:39:36.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:36.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 20 of 25 seconds left=================== 15-12-21 22:39:36.560 -05 000000080 INF: ===================Frame #1079=================== 15-12-21 22:39:36.587 -05 000000078 INF: ===================Frame #1081=================== 15-12-21 22:39:36.710 -05 000000080 INF: ===================Frame #1091=================== 15-12-21 22:39:36.737 -05 000000078 INF: ===================Frame #1093=================== 15-12-21 22:39:36.741 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:36.810 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 22:39:36.810 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:36.861 -05 000000080 INF: ===================Frame #1103=================== 15-12-21 22:39:36.887 -05 000000078 INF: ===================Frame #1105=================== 15-12-21 22:39:37.011 -05 000000080 INF: ===================Frame #1115=================== 15-12-21 22:39:37.037 -05 000000078 INF: ===================Frame #1117=================== 15-12-21 22:39:37.161 -05 000000080 INF: ===================Frame #1127=================== 15-12-21 22:39:37.189 -05 000000078 INF: ===================Frame #1129=================== 15-12-21 22:39:37.311 -05 000000080 INF: ===================Frame #1138=================== 15-12-21 22:39:37.339 -05 000000078 INF: ===================Frame #1141=================== 15-12-21 22:39:37.489 -05 000000078 INF: ===================Frame #1152=================== 15-12-21 22:39:37.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:37.509 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 19 of 25 seconds left=================== 15-12-21 22:39:37.539 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:37.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:37.561 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:37.575 -05 000000080 INF: ===================Frame #1159=================== 15-12-21 22:39:37.666 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:37.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:37.685 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:37.726 -05 000000080 INF: ===================Frame #1171=================== 15-12-21 22:39:37.745 -05 000000078 INF: ===================Frame #1173=================== 15-12-21 22:39:37.793 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:37.812 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:37.812 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:37.876 -05 000000080 INF: ===================Frame #1183=================== 15-12-21 22:39:37.895 -05 000000078 INF: ===================Frame #1185=================== 15-12-21 22:39:38.026 -05 000000080 INF: ===================Frame #1195=================== 15-12-21 22:39:38.045 -05 000000078 INF: ===================Frame #1196=================== 15-12-21 22:39:38.176 -05 000000080 INF: ===================Frame #1207=================== 15-12-21 22:39:38.238 -05 000000078 INF: ===================Frame #1212=================== 15-12-21 22:39:38.326 -05 000000080 INF: ===================Frame #1219=================== 15-12-21 22:39:38.404 -05 000000078 INF: ===================Frame #1225=================== 15-12-21 22:39:38.476 -05 000000080 INF: ===================Frame #1230=================== 15-12-21 22:39:38.510 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:38.510 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 18 of 25 seconds left=================== 15-12-21 22:39:38.554 -05 000000078 INF: ===================Frame #1237=================== 15-12-21 22:39:38.704 -05 000000078 INF: ===================Frame #1249=================== 15-12-21 22:39:38.716 -05 000000080 INF: ===================Frame #1249=================== 15-12-21 22:39:38.746 -05 000000022 INF: FPGA: Recv TDIYWAIT 15-12-21 22:39:38.747 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:39:38.753 -05 000000028 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:39:38.755 -05 000000023 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:39:38.755 -05 000000023 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:39:38.755 -05 000000023 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:39:38.755 -05 000000023 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:39:38.755 -05 000000023 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:39:38.755 -05 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:39:38.755 -05 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:39:38.756 -05 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:39:38.756 -05 000000090 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:39:38.762 -05 000000090 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:39:38.854 -05 000000078 INF: ===================Frame #1250=================== 15-12-21 22:39:38.866 -05 000000080 INF: ===================Frame #1250=================== 15-12-21 22:39:38.898 -05 000000080 INF: Camera complete - got 1250 frames. 15-12-21 22:39:38.900 -05 000000080 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:39:38.906 -05 000000078 INF: Camera complete - got 1250 frames. 15-12-21 22:39:38.908 -05 000000078 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:39:38.932 -05 000000063 INF: FPGA: Recv EX1MV 15-12-21 22:39:38.932 -05 000000023 INF: Excitation Filter 1: Moved 36 steps in 177.0106 ms 15-12-21 22:39:38.932 -05 000000023 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 177.0979 ms 15-12-21 22:39:38.932 -05 000000023 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 177.1719 ms 15-12-21 22:39:38.932 -05 000000023 INF: ====================================== 15-12-21 22:39:39.034 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:39.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:39.058 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:39.165 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:39.183 -05 000000082 INF: FPGA: Recv EX2MV 15-12-21 22:39:39.183 -05 000000090 INF: Excitation Filter 2: Moved 107 steps in 427.4164 ms 15-12-21 22:39:39.183 -05 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 427.5266 ms 15-12-21 22:39:39.183 -05 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 427.6194 ms 15-12-21 22:39:39.184 -05 000000090 INF: ====================================== 15-12-21 22:39:39.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:39.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:39.186 -05 000000028 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:39:39.189 -05 000000028 INF: ====================================== 15-12-21 22:39:39.245 -05 000000080 INF: ===================Camera TDI=================== 15-12-21 22:39:39.272 -05 000000080 INF: ====================================== 15-12-21 22:39:39.290 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:39.307 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.810C:A1\r\n 15-12-21 22:39:39.307 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:39.358 -05 000000078 INF: ===================Camera TDI=================== 15-12-21 22:39:39.378 -05 000000078 INF: ====================================== 15-12-21 22:39:39.380 -05 000000085 INF: ===================Camera TDI=================== 15-12-21 22:39:39.384 -05 000000085 INF: ====================================== 15-12-21 22:39:39.414 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:39.434 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:39.434 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:39.511 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:39.511 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 17 of 25 seconds left=================== 15-12-21 22:39:39.559 -05 000000068 INF: Y Motor: Moved to 9.0765 after 16973 ms 15-12-21 22:39:39.560 -05 000000068 INF: ====================================== 15-12-21 22:39:39.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:39.565 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:39.566 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:39.568 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:39:39.618 -05 000000095 INF: FPGA: Recv TDICLINES 11199 15-12-21 22:39:39.618 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:39:39.732 -05 000000082 INF: FPGA: Recv TDIYERD 907647 15-12-21 22:39:39.732 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:39:39.803 -05 000000024 INF: FPGA: Recv ZADCR 37675 15-12-21 22:39:39.810 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.144. Y moved -60.304 mm 15-12-21 22:39:39.819 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:39:39.851 -05 000000029 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:39:39.851 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:39:39.852 -05 000000057 INF: TDIScan finished after 22276.4611 ms 15-12-21 22:39:39.852 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:39:39.852 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:39:39.856 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:39.884 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.978 um 15-12-21 22:39:39.884 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:39.887 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:39.888 -05 000000085 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:39:39.888 -05 000000085 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:39:39.888 -05 000000024 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:39:39.888 -05 000000055 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:39:39.889 -05 000000024 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:39:39.889 -05 000000024 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:39:39.889 -05 000000056 INF: ===================Dither Clean Up Command=================== 15-12-21 22:39:39.891 -05 000000095 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:39:39.891 -05 000000078 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:39:39.891 -05 000000078 INF: ===================LFT:Extracting coords=================== 15-12-21 22:39:39.893 -05 000000095 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:39:39.916 -05 000000080 INF: FPGA: Recv ZSTEP 15-12-21 22:39:39.916 -05 000000080 INF: FPGA: Recv ZSEL 15-12-21 22:39:39.916 -05 000000095 INF: FPGA: Xmit ZDACW 42618\n 15-12-21 22:39:39.917 -05 000000085 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:39:39.918 -05 000000024 INF: ====================================== 15-12-21 22:39:39.918 -05 000000055 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:39:39.918 -05 000000085 INF: ====================================== 15-12-21 22:39:39.937 -05 000000078 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:39:39.939 -05 000000078 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:39:39.940 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:39.940 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:39.940 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:39.940 -05 000000068 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:39:39.941 -05 000000082 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:39:39.941 -05 000000029 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:39:39.942 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:39.943 -05 000000023 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:39:40.009 -05 000000080 INF: FPGA: Recv ZDACW 15-12-21 22:39:40.010 -05 000000055 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:39:40.010 -05 000000095 INF: ====================================== 15-12-21 22:39:40.013 -05 000000055 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:39:40.013 -05 000000055 INF: ====================================== 15-12-21 22:39:40.131 -05 000000082 INF: LFT found best fwhm score 2.907075 in 151 ms 15-12-21 22:39:40.131 -05 000000082 INF: LFT found good score at index 2353 with fwhm value 2.907075. Next cycle, cycle 45 starting Z position for top surface is at -0.165 mm FC:A, C:44,L:2,T 15-12-21 22:39:40.132 -05 000000082 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:40.132 -05 000000082 INF: ====================================== 15-12-21 22:39:40.139 -05 000000029 INF: LFT found best fwhm score 3.03315 in 158 ms 15-12-21 22:39:40.139 -05 000000029 INF: LFT found good score at index 8497 with fwhm value 3.03315. Next cycle, cycle 45 starting Z position for top surface is at -0.164 mm FC:A, C:44,L:2,T 15-12-21 22:39:40.140 -05 000000029 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:40.140 -05 000000029 INF: ====================================== 15-12-21 22:39:40.175 -05 000000023 INF: LFT found best fwhm score 2.877688 in 193 ms 15-12-21 22:39:40.175 -05 000000023 INF: LFT found good score at index 3517 with fwhm value 2.877688. Next cycle, cycle 45 starting Z position for top surface is at -0.165 mm FC:A, C:44,L:2,T 15-12-21 22:39:40.176 -05 000000023 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:40.176 -05 000000023 INF: ====================================== 15-12-21 22:39:40.177 -05 000000068 INF: LFT found best fwhm score 2.828165 in 196 ms 15-12-21 22:39:40.177 -05 000000068 INF: LFT found good score at index 5 with fwhm value 2.828165. Next cycle, cycle 45 starting Z position for top surface is at -0.166 mm FC:A, C:44,L:2,T 15-12-21 22:39:40.177 -05 000000068 INF: ===================LookupFocusTracking=================== 15-12-21 22:39:40.177 -05 000000068 INF: ====================================== 15-12-21 22:39:40.181 -05 000000078 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:39:40.182 -05 000000078 INF: LFT weighted average best Z for top surface is at -0.165mm FC:A, C:44,L:2,T 15-12-21 22:39:40.184 -05 000000078 INF: ====================================== 15-12-21 22:39:40.186 -05 000000056 INF: ====================================== 15-12-21 22:39:40.189 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:40.191 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:39:40.192 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:40.192 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:39:40.192 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:40.192 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:39:40.192 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:40.192 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:39:40.192 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:40.193 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:39:40.193 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:39:40.194 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:39:40.194 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:39:40.194 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 17 of 25 seconds left, Waiting for image analysis=================== 15-12-21 22:39:40.194 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 17 of 25 seconds left=================== 15-12-21 22:39:40.194 -05 000000057 INF: Waited 0 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 0, buffer wait time 0 15-12-21 22:39:40.194 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:39:40.195 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:40.195 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:39:40.196 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:39:40.196 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface, Lane 2=================== 15-12-21 22:39:40.200 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Top Surface=================== 15-12-21 22:39:40.200 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:39:40.200 -05 000000074 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204=================== 15-12-21 22:39:40.200 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface=================== 15-12-21 22:39:40.200 -05 000000094 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204=================== 15-12-21 22:39:40.200 -05 000000009 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204=================== 15-12-21 22:39:40.200 -05 000000071 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205=================== 15-12-21 22:39:40.200 -05 000000065 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204=================== 15-12-21 22:39:40.201 -05 000000075 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206=================== 15-12-21 22:39:40.201 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface=================== 15-12-21 22:39:40.211 -05 000000057 INF: Compensator: Moving OutOfPath 15-12-21 22:39:40.211 -05 000000057 INF: FPGA: Xmit MIOCOMPR\n 15-12-21 22:39:40.212 -05 000000089 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207, Registering and Extracting C044 L002 T1208=================== 15-12-21 22:39:40.213 -05 000000060 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207, Registering and Extracting C044 L002 T1208=================== 15-12-21 22:39:40.479 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:40.511 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.003C:A1\r\n 15-12-21 22:39:40.511 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:40.512 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:40.512 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 16 of 25 seconds left=================== 15-12-21 22:39:40.570 -05 000000024 INF: FPGA: Recv MIOCOMPR 15-12-21 22:39:40.570 -05 000000057 INF: Compensator: Moved OutOfPath in 359 ms 15-12-21 22:39:40.571 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface=================== 15-12-21 22:39:40.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:39:40.603 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:39:40.603 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:39:40.611 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:39:40.615 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:39:40.619 -05 000000057 INF: Compensator: Remaining OutOfPath 15-12-21 22:39:40.620 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:39:40.801 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:39:40.856 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:39:40.857 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:39:40.935 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:40.935 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:39:40.935 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:40.935 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -162.6 um, section = A_1 15-12-21 22:39:40.941 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:39:40.944 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:39:40.985 -05 000000024 INF: ===================MoveEmissionFilters=================== 15-12-21 22:39:40.986 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:39:40.986 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 22:39:40.987 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:39:40.987 -05 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:39:40.987 -05 000000028 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:39:40.987 -05 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:39:40.987 -05 000000028 INF: Z Motor: Moving to -0.1110 mm, started at -0.1626 mm 15-12-21 22:39:40.987 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:39:40.987 -05 000000028 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:39:40.987 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:39:40.987 -05 000000055 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:39:40.988 -05 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:39:40.989 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:39:40.989 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:39:40.989 -05 000000080 INF: ===================Move X Motor without settling=================== 15-12-21 22:39:40.989 -05 000000078 INF: ===================Move Y Motor without settling=================== 15-12-21 22:39:40.989 -05 000000080 INF: X Motor: Xmit PR VM\n 15-12-21 22:39:40.990 -05 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:39:40.990 -05 000000078 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:39:40.990 -05 000000078 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:39:40.990 -05 000000090 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:39:40.990 -05 000000056 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:39:40.990 -05 000000056 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:39:40.991 -05 000000095 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:39:40.991 -05 000000049 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:39:40.991 -05 000000068 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:39:40.991 -05 000000056 INF: ====================================== 15-12-21 22:39:40.991 -05 000000081 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:39:40.991 -05 000000049 INF: ====================================== 15-12-21 22:39:40.992 -05 000000078 INF: Y Motor: Xmit 1G\n 15-12-21 22:39:40.992 -05 000000081 INF: ====================================== 15-12-21 22:39:40.993 -05 000000090 INF: ====================================== 15-12-21 22:39:40.993 -05 000000095 INF: ====================================== 15-12-21 22:39:41.070 -05 000000068 INF: ====================================== 15-12-21 22:39:41.071 -05 000000049 INF: FPGA: Recv ZTRG 15-12-21 22:39:41.071 -05 000000028 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:39:41.071 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:39:41.072 -05 000000085 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:39:41.072 -05 000000049 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:39:41.073 -05 000000078 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:39:41.073 -05 000000023 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:39:41.124 -05 000000056 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:39:41.125 -05 000000078 INF: Y Motor: Recv 1G\r\n 15-12-21 22:39:41.125 -05 000000080 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:39:41.125 -05 000000080 INF: X Motor: Xmit PR VI\n 15-12-21 22:39:41.126 -05 000000049 INF: ====================================== 15-12-21 22:39:41.149 -05 000000081 INF: FPGA: Recv ZYT 15-12-21 22:39:41.149 -05 000000056 INF: ====================================== 15-12-21 22:39:41.149 -05 000000085 INF: ====================================== 15-12-21 22:39:41.149 -05 000000028 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:39:41.149 -05 000000028 INF: FPGA: Xmit ZMV 29105\n 15-12-21 22:39:41.149 -05 000000078 INF: Y Motor: Xmit 1D\n 15-12-21 22:39:41.150 -05 000000082 INF: ====================================== 15-12-21 22:39:41.188 -05 000000023 INF: ====================================== 15-12-21 22:39:41.235 -05 000000085 INF: FPGA: Recv ZMV 15-12-21 22:39:41.235 -05 000000028 INF: Z Motor: MoveAndTrigger 'ZMV' command took 85.5904 ms 15-12-21 22:39:41.235 -05 000000028 INF: FPGA: Xmit ZDACR\n 15-12-21 22:39:41.235 -05 000000029 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:39:41.236 -05 000000078 INF: Y Motor: Recv 1D\r\n 15-12-21 22:39:41.261 -05 000000080 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:39:41.261 -05 000000080 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:39:41.261 -05 000000078 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:39:41.261 -05 000000080 INF: X Motor: Moving to 12.8720 mm @15.000 mm/sec, started at 17.9380 mm 15-12-21 22:39:41.261 -05 000000080 INF: X Motor: Xmit MA -18894\n 15-12-21 22:39:41.268 -05 000000029 INF: ====================================== 15-12-21 22:39:41.268 -05 000000078 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:39:41.275 -05 000000024 INF: ====================================== 15-12-21 22:39:41.295 -05 000000081 INF: FPGA: Recv ZDACR 29105 15-12-21 22:39:41.296 -05 000000028 INF: Z Motor: MoveAndTrigger took 308.8956 ms w/comms 15-12-21 22:39:41.296 -05 000000028 INF: Z Motor: After move to -0.1110, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:39:41.298 -05 000000080 INF: X Motor: Recv MA -18894\r\n> 15-12-21 22:39:41.298 -05 000000028 INF: Z Motor: MoveAbsStepped took 308.9695 ms 15-12-21 22:39:41.298 -05 000000080 INF: X Motor: WaitUntilStopped 60338 15-12-21 22:39:41.310 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:39:41.327 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:39:41.328 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:41.343 -05 000000090 INF: ===================Camera Arm TDI=================== 15-12-21 22:39:41.343 -05 000000029 INF: ===================TDI Scan Setup=================== 15-12-21 22:39:41.375 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:41.375 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:41.428 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:41.507 -05 000000029 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:39:41.508 -05 000000029 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:39:41.538 -05 000000029 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:39:41.539 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:41.554 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 15 of 25 seconds left=================== 15-12-21 22:39:41.576 -05 000000082 INF: FPGA: Recv ZSEL 15-12-21 22:39:41.613 -05 000000029 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:39:41.614 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:41.732 -05 000000029 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:39:41.759 -05 000000029 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:39:41.759 -05 000000029 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:39:41.809 -05 000000056 INF: FPGA: Recv ZSTEP 15-12-21 22:39:41.815 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:41.849 -05 000000029 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:39:41.850 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:41.858 -05 000000029 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:39:41.859 -05 000000029 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:39:41.859 -05 000000029 INF: Z Motor: Arming to move to -0.0710 mm 15-12-21 22:39:41.859 -05 000000029 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:39:41.896 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:41.972 -05 000000081 INF: FPGA: Recv ZYT 15-12-21 22:39:41.972 -05 000000029 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1578411 enc / 15.784 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:39:41.972 -05 000000029 INF: FPGA: Xmit ZARM 18619\n 15-12-21 22:39:41.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:41.974 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:42.023 -05 000000068 INF: FPGA: Recv ZARM 15-12-21 22:39:42.023 -05 000000029 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 50.6273 ms 15-12-21 22:39:42.023 -05 000000029 INF: Z Motor: ArmAbsStepped took 164.1242 ms 15-12-21 22:39:42.024 -05 000000029 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:39:42.027 -05 000000029 INF: ===================TDI Scan Setup=================== 15-12-21 22:39:42.056 -05 000000029 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:39:42.072 -05 000000029 INF: ===================TDI Scan Setup=================== 15-12-21 22:39:42.076 -05 000000029 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:39:42.144 -05 000000029 INF: ===================TDI Scan Setup=================== 15-12-21 22:39:42.147 -05 000000029 INF: ====================================== 15-12-21 22:39:42.198 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:42.260 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:39:42.260 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:42.378 -05 000000080 INF: X Motor: Xmit PR ER\n 15-12-21 22:39:42.418 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:42.446 -05 000000080 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:39:42.446 -05 000000080 INF: X Motor: Moved to 12.8696 after 1148 ms 15-12-21 22:39:42.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:42.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:42.447 -05 000000080 INF: ====================================== 15-12-21 22:39:42.563 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:42.565 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 14 of 25 seconds left=================== 15-12-21 22:39:43.045 -05 000000090 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:39:43.045 -05 000000090 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:39:43.045 -05 000000090 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:39:43.565 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:43.565 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 13 of 25 seconds left=================== 15-12-21 22:39:43.754 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:43.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:43.770 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:43.874 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:43.894 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:43.894 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:43.999 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:44.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:44.018 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:44.414 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:44.433 -05 000000090 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:39:44.434 -05 000000090 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:39:44.434 -05 000000090 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:39:44.438 -05 000000090 INF: ====================================== 15-12-21 22:39:44.443 -05 000000028 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:39:44.445 -05 000000028 INF: ====================================== 15-12-21 22:39:44.461 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.835C:A1\r\n 15-12-21 22:39:44.461 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:44.566 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:44.566 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 12 of 25 seconds left=================== 15-12-21 22:39:44.851 -05 000000071 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207=================== 15-12-21 22:39:44.891 -05 000000011 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207, Registering and Extracting C044 L002 T1209=================== 15-12-21 22:39:44.912 -05 000000078 INF: Y Motor: Moved to 70.6885 after 3644 ms 15-12-21 22:39:44.913 -05 000000078 INF: ====================================== 15-12-21 22:39:44.916 -05 000000055 INF: ===================Move X,Y=================== 15-12-21 22:39:44.918 -05 000000055 INF: ====================================== 15-12-21 22:39:44.967 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:39:44.972 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:44.984 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:39:45.050 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:39:45.051 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:39:45.061 -05 000000085 INF: FPGA: Recv ZFREQCL 15-12-21 22:39:45.062 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:39:45.062 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:45.063 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:39:45.107 -05 000000094 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207=================== 15-12-21 22:39:45.127 -05 000000056 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:39:45.127 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:39:45.129 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:39:45.130 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:39:45.136 -05 000000080 INF: ===================TDI FPGA Arm=================== 15-12-21 22:39:45.136 -05 000000081 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:39:45.137 -05 000000081 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:39:45.141 -05 000000080 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:39:45.161 -05 000000080 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:39:45.162 -05 000000080 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:39:45.173 -05 000000081 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:39:45.174 -05 000000081 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:39:45.174 -05 000000081 INF: ====================================== 15-12-21 22:39:45.190 -05 000000066 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207, Registering and Extracting C044 L002 T1210=================== 15-12-21 22:39:45.225 -05 000000068 INF: FPGA: Recv TDIYPOS 15-12-21 22:39:45.226 -05 000000080 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:39:45.227 -05 000000075 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207=================== 15-12-21 22:39:45.264 -05 000000080 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:39:45.264 -05 000000080 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:39:45.291 -05 000000038 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207, Registering and Extracting C044 L002 T1211=================== 15-12-21 22:39:45.328 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:45.342 -05 000000079 INF: FPGA: Recv TDIYARM3 15-12-21 22:39:45.343 -05 000000080 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:39:45.345 -05 000000080 INF: ===================TDI FPGA Arm=================== 15-12-21 22:39:45.396 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:45.396 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:45.396 -05 000000080 INF: ====================================== 15-12-21 22:39:45.398 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:39:45.403 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:39:45.406 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:45.407 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:45.420 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:45.430 -05 000000028 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:39:45.430 -05 000000049 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:39:45.430 -05 000000028 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:39:45.430 -05 000000028 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:39:45.430 -05 000000028 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:39:45.430 -05 000000028 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:39:45.430 -05 000000049 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:39:45.430 -05 000000049 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:39:45.430 -05 000000049 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:39:45.437 -05 000000049 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:39:45.505 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:45.566 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:45.570 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:45.571 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:45.571 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 11 of 25 seconds left=================== 15-12-21 22:39:45.608 -05 000000056 INF: FPGA: Recv EX1MV 15-12-21 22:39:45.608 -05 000000028 INF: Excitation Filter 1: Moved -36 steps in 178.1439 ms 15-12-21 22:39:45.608 -05 000000028 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 178.2718 ms 15-12-21 22:39:45.609 -05 000000028 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 178.4438 ms 15-12-21 22:39:45.609 -05 000000028 INF: ====================================== 15-12-21 22:39:45.692 -05 000000065 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207=================== 15-12-21 22:39:45.694 -05 000000077 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207, Registering and Extracting C044 L002 T1212=================== 15-12-21 22:39:45.714 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:45.761 -05 000000089 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207=================== 15-12-21 22:39:45.766 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:45.766 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:45.794 -05 000000040 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207, Registering and Extracting C044 L002 T1213=================== 15-12-21 22:39:45.795 -05 000000074 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207=================== 15-12-21 22:39:45.800 -05 000000056 INF: FPGA: Recv EX2MV 15-12-21 22:39:45.800 -05 000000049 INF: Excitation Filter 2: Moved -107 steps in 369.9219 ms 15-12-21 22:39:45.800 -05 000000049 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 370.0506 ms 15-12-21 22:39:45.801 -05 000000049 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 370.1594 ms 15-12-21 22:39:45.802 -05 000000049 INF: ====================================== 15-12-21 22:39:45.804 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:45.893 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:39:45.909 -05 000000051 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207, Registering and Extracting C044 L002 T1214=================== 15-12-21 22:39:45.910 -05 000000095 INF: ===================Camera TDI=================== 15-12-21 22:39:45.910 -05 000000085 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:39:45.910 -05 000000028 INF: ===================FPGA Z Wait=================== 15-12-21 22:39:45.934 -05 000000028 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:39:45.957 -05 000000079 INF: ===================Move Y Motor without settling=================== 15-12-21 22:39:45.958 -05 000000079 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:39:45.958 -05 000000079 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:39:45.959 -05 000000079 INF: Y Motor: Xmit 1G\n 15-12-21 22:39:45.965 -05 000000085 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:39:45.965 -05 000000095 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:39:45.965 -05 000000085 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:39:45.971 -05 000000022 INF: ===================Camera TDI=================== 15-12-21 22:39:45.978 -05 000000082 INF: ===================Camera TDI=================== 15-12-21 22:39:46.020 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:46.023 -05 000000079 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:39:46.024 -05 000000079 INF: Y Motor: Recv 1G\r\n 15-12-21 22:39:46.025 -05 000000079 INF: Y Motor: Xmit 1D\n 15-12-21 22:39:46.049 -05 000000009 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1207=================== 15-12-21 22:39:46.079 -05 000000079 INF: Y Motor: Recv 1D\r\n 15-12-21 22:39:46.080 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.016C:A1\r\n 15-12-21 22:39:46.080 -05 000000079 INF: Y Motor: Recv *407662\r\n 15-12-21 22:39:46.080 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:46.081 -05 000000079 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:39:46.092 -05 000000060 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206=================== 15-12-21 22:39:46.096 -05 000000027 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1215=================== 15-12-21 22:39:46.096 -05 000000048 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1215, Registering and Extracting C044 L002 T1216=================== 15-12-21 22:39:46.280 -05 000000023 INF: FPGA: Recv ZWAIT 15-12-21 22:39:46.281 -05 000000028 INF: ====================================== 15-12-21 22:39:46.426 -05 000000022 INF: ===================Frame #1=================== 15-12-21 22:39:46.456 -05 000000082 INF: ===================Frame #4=================== 15-12-21 22:39:46.571 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:46.571 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 10 of 25 seconds left=================== 15-12-21 22:39:46.576 -05 000000022 INF: ===================Frame #13=================== 15-12-21 22:39:46.625 -05 000000082 INF: ===================Frame #17=================== 15-12-21 22:39:46.727 -05 000000022 INF: ===================Frame #25=================== 15-12-21 22:39:46.775 -05 000000082 INF: ===================Frame #29=================== 15-12-21 22:39:46.877 -05 000000022 INF: ===================Frame #37=================== 15-12-21 22:39:46.948 -05 000000082 INF: ===================Frame #43=================== 15-12-21 22:39:47.029 -05 000000022 INF: ===================Frame #49=================== 15-12-21 22:39:47.099 -05 000000082 INF: ===================Frame #55=================== 15-12-21 22:39:47.180 -05 000000022 INF: ===================Frame #61=================== 15-12-21 22:39:47.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:47.261 -05 000000082 INF: ===================Frame #67=================== 15-12-21 22:39:47.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:47.283 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:47.334 -05 000000022 INF: ===================Frame #73=================== 15-12-21 22:39:47.385 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:47.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:47.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:47.412 -05 000000082 INF: ===================Frame #79=================== 15-12-21 22:39:47.484 -05 000000022 INF: ===================Frame #85=================== 15-12-21 22:39:47.508 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:47.549 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.992C:A1\r\n 15-12-21 22:39:47.549 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:47.563 -05 000000082 INF: ===================Frame #91=================== 15-12-21 22:39:47.572 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:47.572 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 9 of 25 seconds left=================== 15-12-21 22:39:47.635 -05 000000022 INF: ===================Frame #97=================== 15-12-21 22:39:47.659 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:47.730 -05 000000082 INF: ===================Frame #105=================== 15-12-21 22:39:47.732 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:47.732 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:47.797 -05 000000022 INF: ===================Frame #110=================== 15-12-21 22:39:47.882 -05 000000082 INF: ===================Frame #116=================== 15-12-21 22:39:48.430 -05 000000011 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206, Registering and Extracting C044 L002 T1215=================== 15-12-21 22:39:48.497 -05 000000022 INF: ===================Frame #165=================== 15-12-21 22:39:48.568 -05 000000082 INF: ===================Frame #171=================== 15-12-21 22:39:48.572 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:48.572 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 8 of 25 seconds left=================== 15-12-21 22:39:48.647 -05 000000022 INF: ===================Frame #177=================== 15-12-21 22:39:48.720 -05 000000082 INF: ===================Frame #183=================== 15-12-21 22:39:48.799 -05 000000022 INF: ===================Frame #189=================== 15-12-21 22:39:48.873 -05 000000082 INF: ===================Frame #195=================== 15-12-21 22:39:48.949 -05 000000022 INF: ===================Frame #201=================== 15-12-21 22:39:49.020 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:49.024 -05 000000082 INF: ===================Frame #207=================== 15-12-21 22:39:49.041 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:49.041 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:49.102 -05 000000022 INF: ===================Frame #213=================== 15-12-21 22:39:49.125 -05 000000066 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205, Registering and Extracting C044 L002 T1206=================== 15-12-21 22:39:49.139 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:49.168 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:49.168 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:49.174 -05 000000082 INF: ===================Frame #219=================== 15-12-21 22:39:49.175 -05 000000038 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204, Registering and Extracting C044 L002 T1205=================== 15-12-21 22:39:49.256 -05 000000022 INF: ===================Frame #225=================== 15-12-21 22:39:49.281 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:49.325 -05 000000082 INF: ===================Frame #231=================== 15-12-21 22:39:49.353 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:49.353 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:49.407 -05 000000022 INF: ===================Frame #237=================== 15-12-21 22:39:49.476 -05 000000082 INF: ===================Frame #242=================== 15-12-21 22:39:49.558 -05 000000022 INF: ===================Frame #249=================== 15-12-21 22:39:49.572 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:49.573 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 7 of 25 seconds left=================== 15-12-21 22:39:49.585 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:49.665 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.791C:A1\r\n 15-12-21 22:39:49.665 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:49.712 -05 000000022 INF: ===================Frame #261=================== 15-12-21 22:39:49.863 -05 000000022 INF: ===================Frame #273=================== 15-12-21 22:39:49.864 -05 000000082 INF: ===================Frame #273=================== 15-12-21 22:39:50.014 -05 000000082 INF: ===================Frame #285=================== 15-12-21 22:39:50.015 -05 000000022 INF: ===================Frame #285=================== 15-12-21 22:39:50.041 -05 000000051 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203, Registering and Extracting C044 L002 T1204=================== 15-12-21 22:39:50.165 -05 000000082 INF: ===================Frame #297=================== 15-12-21 22:39:50.165 -05 000000022 INF: ===================Frame #297=================== 15-12-21 22:39:50.169 -05 000000077 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202, Registering and Extracting C044 L002 T1203=================== 15-12-21 22:39:50.315 -05 000000082 INF: ===================Frame #309=================== 15-12-21 22:39:50.315 -05 000000022 INF: ===================Frame #309=================== 15-12-21 22:39:50.316 -05 000000027 INF: ===================Registering and Extracting C044 L002 T1201, Registering and Extracting C044 L002 T1202=================== 15-12-21 22:39:50.375 -05 000000040 INF: ===================Registering and Extracting C044 L002 T1201=================== 15-12-21 22:39:50.425 -05 000000048 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:39:50.466 -05 000000082 INF: ===================Frame #321=================== 15-12-21 22:39:50.466 -05 000000022 INF: ===================Frame #321=================== 15-12-21 22:39:50.471 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:50.477 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:39:50.574 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:50.574 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 6 of 25 seconds left=================== 15-12-21 22:39:50.579 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:50.580 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:50.588 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:39:50.603 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:50.603 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:50.616 -05 000000082 INF: ===================Frame #333=================== 15-12-21 22:39:50.617 -05 000000022 INF: ===================Frame #333=================== 15-12-21 22:39:50.691 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:50.699 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:39:50.712 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:50.728 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:50.728 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:50.767 -05 000000082 INF: ===================Frame #345=================== 15-12-21 22:39:50.767 -05 000000022 INF: ===================Frame #345=================== 15-12-21 22:39:50.837 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:50.862 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:50.870 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:39:50.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:50.917 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:50.917 -05 000000082 INF: ===================Frame #356=================== 15-12-21 22:39:50.917 -05 000000022 INF: ===================Frame #356=================== 15-12-21 22:39:51.002 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:39:51.205 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:51.226 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.044C:A1\r\n 15-12-21 22:39:51.226 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:51.311 -05 000000082 INF: ===================Frame #388=================== 15-12-21 22:39:51.523 -05 000000082 INF: ===================Frame #404=================== 15-12-21 22:39:51.575 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:51.575 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 5 of 25 seconds left=================== 15-12-21 22:39:51.642 -05 000000022 INF: ===================Frame #414=================== 15-12-21 22:39:51.716 -05 000000082 INF: ===================Frame #420=================== 15-12-21 22:39:51.905 -05 000000082 INF: ===================Frame #435=================== 15-12-21 22:39:51.944 -05 000000022 INF: ===================Frame #438=================== 15-12-21 22:39:52.057 -05 000000082 INF: ===================Frame #447=================== 15-12-21 22:39:52.143 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:52.155 -05 000000022 INF: ===================Frame #454=================== 15-12-21 22:39:52.162 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:52.162 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:52.162 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:39:52.207 -05 000000082 INF: ===================Frame #458=================== 15-12-21 22:39:52.272 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:52.332 -05 000000022 INF: ===================Frame #468=================== 15-12-21 22:39:52.348 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:52.348 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:52.406 -05 000000082 INF: ===================Frame #474=================== 15-12-21 22:39:52.446 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:52.474 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:52.474 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:52.505 -05 000000022 INF: ===================Frame #482=================== 15-12-21 22:39:52.575 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:52.575 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 4 of 25 seconds left=================== 15-12-21 22:39:52.580 -05 000000082 INF: ===================Frame #488=================== 15-12-21 22:39:52.659 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:52.680 -05 000000022 INF: ===================Frame #496=================== 15-12-21 22:39:52.724 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.986C:A1\r\n 15-12-21 22:39:52.724 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:52.748 -05 000000082 INF: ===================Frame #501=================== 15-12-21 22:39:52.851 -05 000000022 INF: ===================Frame #509=================== 15-12-21 22:39:52.901 -05 000000082 INF: ===================Frame #513=================== 15-12-21 22:39:53.002 -05 000000022 INF: ===================Frame #521=================== 15-12-21 22:39:53.051 -05 000000082 INF: ===================Frame #525=================== 15-12-21 22:39:53.152 -05 000000022 INF: ===================Frame #533=================== 15-12-21 22:39:53.201 -05 000000082 INF: ===================Frame #537=================== 15-12-21 22:39:53.304 -05 000000022 INF: ===================Frame #545=================== 15-12-21 22:39:53.351 -05 000000082 INF: ===================Frame #549=================== 15-12-21 22:39:53.455 -05 000000022 INF: ===================Frame #557=================== 15-12-21 22:39:53.501 -05 000000082 INF: ===================Frame #561=================== 15-12-21 22:39:53.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:53.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 3 of 25 seconds left=================== 15-12-21 22:39:53.606 -05 000000022 INF: ===================Frame #569=================== 15-12-21 22:39:53.651 -05 000000082 INF: ===================Frame #573=================== 15-12-21 22:39:53.709 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:53.722 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:53.722 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:53.756 -05 000000022 INF: ===================Frame #581=================== 15-12-21 22:39:53.801 -05 000000082 INF: ===================Frame #584=================== 15-12-21 22:39:53.828 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:53.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:53.846 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:53.908 -05 000000022 INF: ===================Frame #593=================== 15-12-21 22:39:53.946 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:53.973 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:53.973 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:54.058 -05 000000022 INF: ===================Frame #605=================== 15-12-21 22:39:54.070 -05 000000082 INF: ===================Frame #606=================== 15-12-21 22:39:54.210 -05 000000022 INF: ===================Frame #617=================== 15-12-21 22:39:54.248 -05 000000082 INF: ===================Frame #620=================== 15-12-21 22:39:54.360 -05 000000022 INF: ===================Frame #629=================== 15-12-21 22:39:54.414 -05 000000082 INF: ===================Frame #633=================== 15-12-21 22:39:54.511 -05 000000022 INF: ===================Frame #641=================== 15-12-21 22:39:54.565 -05 000000082 INF: ===================Frame #645=================== 15-12-21 22:39:54.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:54.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 2 of 25 seconds left=================== 15-12-21 22:39:54.662 -05 000000022 INF: ===================Frame #653=================== 15-12-21 22:39:54.715 -05 000000082 INF: ===================Frame #657=================== 15-12-21 22:39:54.765 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:39:54.782 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.373C:A1\r\n 15-12-21 22:39:54.782 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:54.812 -05 000000022 INF: ===================Frame #664=================== 15-12-21 22:39:54.866 -05 000000082 INF: ===================Frame #669=================== 15-12-21 22:39:55.016 -05 000000082 INF: ===================Frame #681=================== 15-12-21 22:39:55.166 -05 000000082 INF: ===================Frame #692=================== 15-12-21 22:39:55.168 -05 000000022 INF: ===================Frame #693=================== 15-12-21 22:39:55.199 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:55.224 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:55.224 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:55.318 -05 000000022 INF: ===================Frame #704=================== 15-12-21 22:39:55.329 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:55.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:55.406 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:55.411 -05 000000082 INF: ===================Frame #712=================== 15-12-21 22:39:55.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:55.520 -05 000000022 INF: ===================Frame #720=================== 15-12-21 22:39:55.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:55.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:55.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:55.576 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 1 of 25 seconds left=================== 15-12-21 22:39:55.588 -05 000000082 INF: ===================Frame #726=================== 15-12-21 22:39:55.693 -05 000000022 INF: ===================Frame #734=================== 15-12-21 22:39:55.758 -05 000000082 INF: ===================Frame #739=================== 15-12-21 22:39:55.860 -05 000000022 INF: ===================Frame #747=================== 15-12-21 22:39:55.908 -05 000000082 INF: ===================Frame #751=================== 15-12-21 22:39:56.010 -05 000000022 INF: ===================Frame #759=================== 15-12-21 22:39:56.059 -05 000000082 INF: ===================Frame #763=================== 15-12-21 22:39:56.162 -05 000000022 INF: ===================Frame #771=================== 15-12-21 22:39:56.209 -05 000000082 INF: ===================Frame #775=================== 15-12-21 22:39:56.312 -05 000000022 INF: ===================Frame #783=================== 15-12-21 22:39:56.326 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:39:56.342 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.028C:A1\r\n 15-12-21 22:39:56.342 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:56.360 -05 000000082 INF: ===================Frame #787=================== 15-12-21 22:39:56.463 -05 000000022 INF: ===================Frame #795=================== 15-12-21 22:39:56.504 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:56.504 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:56.504 -05 000000062 INF: WaitCommand(25000) end 15-12-21 22:39:56.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:56.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:39:56.506 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:56.510 -05 000000082 INF: ===================Frame #799=================== 15-12-21 22:39:56.592 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:56.592 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 22:39:56.592 -05 000000062 INF: Valve B2: Go to position 5 15-12-21 22:39:56.592 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:39:56.613 -05 000000022 INF: ===================Frame #807=================== 15-12-21 22:39:56.654 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 1\r 15-12-21 22:39:56.654 -05 000000062 INF: Valve B2: 42.650 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:39:56.654 -05 000000062 INF: Valve B2: Taking shortest path 'CW' from 1 to 5 15-12-21 22:39:56.654 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CW5\r 15-12-21 22:39:56.655 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:39:56.655 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:39:56.660 -05 000000082 INF: ===================Frame #811=================== 15-12-21 22:39:56.763 -05 000000022 INF: ===================Frame #819=================== 15-12-21 22:39:56.810 -05 000000082 INF: ===================Frame #822=================== 15-12-21 22:39:56.820 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:56.842 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:56.842 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:56.915 -05 000000022 INF: ===================Frame #831=================== 15-12-21 22:39:56.948 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:56.966 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:56.966 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:57.065 -05 000000022 INF: ===================Frame #843=================== 15-12-21 22:39:57.072 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:57.082 -05 000000082 INF: ===================Frame #844=================== 15-12-21 22:39:57.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:57.155 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:57.216 -05 000000022 INF: ===================Frame #854=================== 15-12-21 22:39:57.261 -05 000000082 INF: ===================Frame #858=================== 15-12-21 22:39:57.437 -05 000000082 INF: ===================Frame #872=================== 15-12-21 22:39:57.544 -05 000000022 INF: ===================Frame #880=================== 15-12-21 22:39:57.591 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 22:39:57.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:57.591 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:39:57.591 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:57.606 -05 000000082 INF: ===================Frame #885=================== 15-12-21 22:39:57.654 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:39:57.654 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:57.725 -05 000000022 INF: ===================Frame #895=================== 15-12-21 22:39:57.756 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:39:57.756 -05 000000082 INF: ===================Frame #897=================== 15-12-21 22:39:57.778 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:39:57.778 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:57.876 -05 000000022 INF: ===================Frame #907=================== 15-12-21 22:39:57.884 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:39:57.902 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 22:39:57.902 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:57.906 -05 000000082 INF: ===================Frame #909=================== 15-12-21 22:39:58.006 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:39:58.026 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:39:58.026 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:58.028 -05 000000022 INF: ===================Frame #919=================== 15-12-21 22:39:58.056 -05 000000082 INF: ===================Frame #921=================== 15-12-21 22:39:58.132 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:39:58.132 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:39:58.133 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:58.178 -05 000000022 INF: ===================Frame #931=================== 15-12-21 22:39:58.206 -05 000000082 INF: ===================Frame #933=================== 15-12-21 22:39:58.214 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:39:58.223 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1000, dispense rate 2500, volume 24, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:39:58.315 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:39:58.329 -05 000000022 INF: ===================Frame #942=================== 15-12-21 22:39:58.357 -05 000000082 INF: ===================Frame #945=================== 15-12-21 22:39:58.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:58.400 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`21120 (0x03)\r\n(0xFF) 15-12-21 22:39:58.400 -05 000000062 INF: Current Position of Pump is: 21120 15-12-21 22:39:58.400 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:39:58.401 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:58.401 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:58.501 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V3200s231P4608R\r 15-12-21 22:39:58.507 -05 000000082 INF: ===================Frame #957=================== 15-12-21 22:39:58.510 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:39:58.527 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:58.527 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:58.564 -05 000000022 INF: ===================Frame #961=================== 15-12-21 22:39:58.588 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:58.633 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:39:58.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:39:58.651 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:58.657 -05 000000082 INF: ===================Frame #968=================== 15-12-21 22:39:58.688 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:58.715 -05 000000022 INF: ===================Frame #973=================== 15-12-21 22:39:58.774 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:58.865 -05 000000022 INF: ===================Frame #985=================== 15-12-21 22:39:58.929 -05 000000082 INF: ===================Frame #990=================== 15-12-21 22:39:59.016 -05 000000022 INF: ===================Frame #997=================== 15-12-21 22:39:59.024 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:59.087 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:59.105 -05 000000082 INF: ===================Frame #1004=================== 15-12-21 22:39:59.168 -05 000000022 INF: ===================Frame #1009=================== 15-12-21 22:39:59.271 -05 000000082 INF: ===================Frame #1017=================== 15-12-21 22:39:59.318 -05 000000022 INF: ===================Frame #1021=================== 15-12-21 22:39:59.337 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:59.401 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:59.421 -05 000000082 INF: ===================Frame #1029=================== 15-12-21 22:39:59.468 -05 000000022 INF: ===================Frame #1033=================== 15-12-21 22:39:59.571 -05 000000082 INF: ===================Frame #1041=================== 15-12-21 22:39:59.618 -05 000000022 INF: ===================Frame #1044=================== 15-12-21 22:39:59.651 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:39:59.713 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:39:59.721 -05 000000082 INF: ===================Frame #1053=================== 15-12-21 22:39:59.872 -05 000000082 INF: ===================Frame #1065=================== 15-12-21 22:39:59.881 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:39:59.900 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:39:59.900 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:39:59.900 -05 000000022 INF: ===================Frame #1067=================== 15-12-21 22:39:59.963 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:00.006 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:00.024 -05 000000082 INF: ===================Frame #1076=================== 15-12-21 22:40:00.024 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:00.025 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.037C:A1\r\n 15-12-21 22:40:00.025 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:00.051 -05 000000022 INF: ===================Frame #1079=================== 15-12-21 22:40:00.128 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:00.150 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:00.150 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:00.201 -05 000000022 INF: ===================Frame #1091=================== 15-12-21 22:40:00.251 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:00.261 -05 000000082 INF: ===================Frame #1095=================== 15-12-21 22:40:00.274 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:00.274 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:00.274 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:00.336 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:00.352 -05 000000022 INF: ===================Frame #1102=================== 15-12-21 22:40:00.411 -05 000000082 INF: ===================Frame #1107=================== 15-12-21 22:40:00.561 -05 000000082 INF: ===================Frame #1119=================== 15-12-21 22:40:00.573 -05 000000022 INF: ===================Frame #1120=================== 15-12-21 22:40:00.586 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:00.649 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:00.649 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:40:00.711 -05 000000082 INF: ===================Frame #1131=================== 15-12-21 22:40:00.745 -05 000000022 INF: ===================Frame #1134=================== 15-12-21 22:40:00.750 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:40:00.838 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 22:40:00.838 -05 000000062 INF: Current Position of Pump is: 25728 15-12-21 22:40:00.838 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:40:00.861 -05 000000082 INF: ===================Frame #1143=================== 15-12-21 22:40:00.911 -05 000000022 INF: ===================Frame #1147=================== 15-12-21 22:40:00.938 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:40:01.011 -05 000000082 INF: ===================Frame #1155=================== 15-12-21 22:40:01.020 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:01.061 -05 000000022 INF: ===================Frame #1159=================== 15-12-21 22:40:01.123 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:01.161 -05 000000082 INF: ===================Frame #1166=================== 15-12-21 22:40:01.209 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:01.211 -05 000000022 INF: ===================Frame #1170=================== 15-12-21 22:40:01.433 -05 000000022 INF: ===================Frame #1188=================== 15-12-21 22:40:01.447 -05 000000082 INF: ===================Frame #1189=================== 15-12-21 22:40:01.459 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:01.508 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:01.523 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:01.523 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:01.523 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:40:01.526 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.998C:A1\r\n 15-12-21 22:40:01.526 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:01.598 -05 000000082 INF: ===================Frame #1201=================== 15-12-21 22:40:01.610 -05 000000022 INF: ===================Frame #1202=================== 15-12-21 22:40:01.634 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:01.710 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:01.710 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:01.748 -05 000000082 INF: ===================Frame #1213=================== 15-12-21 22:40:01.776 -05 000000022 INF: ===================Frame #1215=================== 15-12-21 22:40:01.817 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:01.834 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:40:01.834 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:01.899 -05 000000082 INF: ===================Frame #1225=================== 15-12-21 22:40:01.927 -05 000000022 INF: ===================Frame #1227=================== 15-12-21 22:40:01.939 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:01.958 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:01.958 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:02.049 -05 000000082 INF: ===================Frame #1237=================== 15-12-21 22:40:02.069 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:40:02.077 -05 000000022 INF: ===================Frame #1239=================== 15-12-21 22:40:02.089 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:40:02.089 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:02.194 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:02.199 -05 000000082 INF: ===================Frame #1248=================== 15-12-21 22:40:02.228 -05 000000022 INF: ===================Frame #1250=================== 15-12-21 22:40:02.271 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:02.271 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:02.271 -05 000000034 INF: FPGA: Recv TDIYWAIT 15-12-21 22:40:02.272 -05 000000085 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:02.276 -05 000000085 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:40:02.279 -05 000000090 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:40:02.279 -05 000000068 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:40:02.282 -05 000000090 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:40:02.282 -05 000000090 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:40:02.282 -05 000000090 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:40:02.282 -05 000000068 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:40:02.282 -05 000000068 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:40:02.282 -05 000000068 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:40:02.282 -05 000000090 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:40:02.308 -05 000000068 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:40:02.328 -05 000000022 INF: Camera complete - got 1250 frames. 15-12-21 22:40:02.330 -05 000000022 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:40:02.372 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:02.395 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:40:02.395 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:02.455 -05 000000024 INF: FPGA: Recv EX1MV 15-12-21 22:40:02.456 -05 000000090 INF: Excitation Filter 1: Moved 36 steps in 173.4595 ms 15-12-21 22:40:02.456 -05 000000090 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 173.5997 ms 15-12-21 22:40:02.456 -05 000000090 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 173.6721 ms 15-12-21 22:40:02.457 -05 000000090 INF: ====================================== 15-12-21 22:40:02.501 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:02.501 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:02.502 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:02.502 -05 000000062 INF: WaitCommand(5000) start 15-12-21 22:40:02.502 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 22:40:02.678 -05 000000082 INF: ===================Frame #1250=================== 15-12-21 22:40:02.678 -05 000000022 INF: ===================Camera TDI=================== 15-12-21 22:40:02.681 -05 000000082 INF: Camera complete - got 1250 frames. 15-12-21 22:40:02.682 -05 000000082 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:40:02.699 -05 000000022 INF: ====================================== 15-12-21 22:40:02.706 -05 000000087 INF: FPGA: Recv EX2MV 15-12-21 22:40:02.706 -05 000000068 INF: Excitation Filter 2: Moved 107 steps in 424.0249 ms 15-12-21 22:40:02.706 -05 000000068 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 424.1175 ms 15-12-21 22:40:02.706 -05 000000068 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 424.2167 ms 15-12-21 22:40:02.707 -05 000000068 INF: ====================================== 15-12-21 22:40:02.709 -05 000000079 INF: Y Motor: Moved to 9.0765 after 16629 ms 15-12-21 22:40:02.711 -05 000000085 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:02.711 -05 000000079 INF: ====================================== 15-12-21 22:40:02.712 -05 000000085 INF: ====================================== 15-12-21 22:40:02.788 -05 000000082 INF: ===================Camera TDI=================== 15-12-21 22:40:02.809 -05 000000082 INF: ====================================== 15-12-21 22:40:02.814 -05 000000095 INF: ===================Camera TDI=================== 15-12-21 22:40:02.817 -05 000000095 INF: ====================================== 15-12-21 22:40:02.820 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:02.823 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:02.826 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:02.826 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:40:02.895 -05 000000095 INF: FPGA: Recv TDICLINES 11283 15-12-21 22:40:02.895 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:40:02.954 -05 000000085 INF: FPGA: Recv TDIYERD 907644 15-12-21 22:40:02.954 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:40:03.018 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:03.070 -05 000000024 INF: FPGA: Recv ZADCR 24118 15-12-21 22:40:03.071 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.092. Y moved -60.304 mm 15-12-21 22:40:03.071 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:40:03.200 -05 000000082 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:40:03.217 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:40:03.260 -05 000000057 INF: TDIScan finished after 22403.1242 ms 15-12-21 22:40:03.285 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:40:03.302 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:40:03.302 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:03.311 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:40:03.468 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.502 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.062 um 15-12-21 22:40:03.503 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.503 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:03.503 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:40:03.509 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.511 -05 000000023 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:40:03.511 -05 000000049 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:40:03.511 -05 000000081 INF: ===================Dither Clean Up Command=================== 15-12-21 22:40:03.511 -05 000000023 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:40:03.511 -05 000000023 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:40:03.511 -05 000000049 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:40:03.512 -05 000000024 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:40:03.513 -05 000000054 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:03.513 -05 000000037 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:40:03.513 -05 000000037 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:40:03.515 -05 000000054 INF: ===================LFT:Extracting coords=================== 15-12-21 22:40:03.543 -05 000000049 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:40:03.544 -05 000000049 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:40:03.544 -05 000000024 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:40:03.545 -05 000000049 INF: ====================================== 15-12-21 22:40:03.559 -05 000000054 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:03.564 -05 000000078 INF: FPGA: Recv ZSTEP 15-12-21 22:40:03.564 -05 000000078 INF: FPGA: Recv ZSEL 15-12-21 22:40:03.564 -05 000000037 INF: FPGA: Xmit ZDACW 29105\n 15-12-21 22:40:03.564 -05 000000054 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:40:03.564 -05 000000023 INF: ====================================== 15-12-21 22:40:03.566 -05 000000033 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:03.566 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:03.566 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:03.567 -05 000000033 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:03.567 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:03.567 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:03.567 -05 000000022 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:03.568 -05 000000056 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:03.625 -05 000000024 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:40:03.627 -05 000000024 INF: ====================================== 15-12-21 22:40:03.628 -05 000000034 INF: FPGA: Recv ZDACW 15-12-21 22:40:03.629 -05 000000037 INF: ====================================== 15-12-21 22:40:03.694 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:03.753 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:03.753 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:03.758 -05 000000033 INF: LFT found best fwhm score 2.547049 in 130 ms 15-12-21 22:40:03.758 -05 000000033 INF: LFT found good score at index 6849 with fwhm value 2.547049. Next cycle, cycle 45 starting Z position for bottom surface is at -0.091 mm FC:A, C:44,L:1,B 15-12-21 22:40:03.759 -05 000000022 INF: LFT found best fwhm score 2.453915 in 131 ms 15-12-21 22:40:03.759 -05 000000022 INF: LFT found good score at index 6765 with fwhm value 2.453915. Next cycle, cycle 45 starting Z position for bottom surface is at -0.091 mm FC:A, C:44,L:1,B 15-12-21 22:40:03.759 -05 000000033 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:03.759 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:03.759 -05 000000033 INF: ====================================== 15-12-21 22:40:03.760 -05 000000022 INF: ====================================== 15-12-21 22:40:03.760 -05 000000056 INF: LFT found best fwhm score 2.719356 in 130 ms 15-12-21 22:40:03.760 -05 000000056 INF: LFT found good score at index 5985 with fwhm value 2.719356. Next cycle, cycle 45 starting Z position for bottom surface is at -0.091 mm FC:A, C:44,L:1,B 15-12-21 22:40:03.760 -05 000000056 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:03.761 -05 000000056 INF: ====================================== 15-12-21 22:40:03.765 -05 000000090 INF: LFT found best fwhm score 2.617321 in 137 ms 15-12-21 22:40:03.766 -05 000000090 INF: LFT found good score at index 6509 with fwhm value 2.617321. Next cycle, cycle 45 starting Z position for bottom surface is at -0.091 mm FC:A, C:44,L:1,B 15-12-21 22:40:03.766 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:03.767 -05 000000090 INF: ====================================== 15-12-21 22:40:03.769 -05 000000054 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:03.771 -05 000000054 INF: LFT weighted average best Z for bottom surface is at -0.091mm FC:A, C:44,L:1,B 15-12-21 22:40:03.771 -05 000000054 INF: ====================================== 15-12-21 22:40:03.776 -05 000000081 INF: ====================================== 15-12-21 22:40:03.777 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.779 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:40:03.780 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.780 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:40:03.780 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.780 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:40:03.784 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.785 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:40:03.785 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.787 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:40:03.787 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:40:03.788 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:40:03.789 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 1 - X = 12.872 Y = 39.38=================== 15-12-21 22:40:03.789 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left, Waiting for image analysis=================== 15-12-21 22:40:03.789 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:40:03.789 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:40:03.789 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:40:03.789 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:40:03.790 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:03.790 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:40:03.790 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:40:03.792 -05 000000048 INF: ===================Registering and Extracting C044 L001 T2101=================== 15-12-21 22:40:03.792 -05 000000027 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102=================== 15-12-21 22:40:03.792 -05 000000051 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103=================== 15-12-21 22:40:03.792 -05 000000040 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104=================== 15-12-21 22:40:03.792 -05 000000077 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105=================== 15-12-21 22:40:03.793 -05 000000038 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106=================== 15-12-21 22:40:03.794 -05 000000011 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2108, Registering and Extracting C044 L001 T2107=================== 15-12-21 22:40:03.794 -05 000000066 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2108, Registering and Extracting C044 L001 T2107=================== 15-12-21 22:40:03.844 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.844 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:40:03.845 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:03.845 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -111.0 um, section = A_1 15-12-21 22:40:03.849 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:03.850 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:03.851 -05 000000028 INF: ===================MoveEmissionFilters=================== 15-12-21 22:40:03.852 -05 000000049 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:03.852 -05 000000054 INF: ===================Move X,Y=================== 15-12-21 22:40:03.853 -05 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:40:03.853 -05 000000024 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:40:03.853 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:40:03.853 -05 000000054 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:40:03.854 -05 000000049 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:40:03.854 -05 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:40:03.854 -05 000000049 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:40:03.856 -05 000000058 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:40:03.856 -05 000000024 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:40:03.856 -05 000000085 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:40:03.856 -05 000000049 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:03.856 -05 000000058 INF: ====================================== 15-12-21 22:40:03.865 -05 000000085 INF: ====================================== 15-12-21 22:40:03.865 -05 000000055 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:40:03.865 -05 000000036 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:40:03.866 -05 000000055 INF: ====================================== 15-12-21 22:40:03.866 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:40:03.866 -05 000000056 INF: ===================Move X Motor without settling=================== 15-12-21 22:40:03.866 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:40:03.866 -05 000000049 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:40:03.866 -05 000000033 INF: ===================Move Y Motor without settling=================== 15-12-21 22:40:03.866 -05 000000036 INF: ====================================== 15-12-21 22:40:03.867 -05 000000056 INF: X Motor: Xmit PR VM\n 15-12-21 22:40:03.867 -05 000000034 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:40:03.868 -05 000000078 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:03.868 -05 000000068 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:40:03.868 -05 000000022 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:40:03.868 -05 000000033 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0765 mm 15-12-21 22:40:03.868 -05 000000024 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:40:03.869 -05 000000033 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:40:03.869 -05 000000068 INF: ====================================== 15-12-21 22:40:03.869 -05 000000078 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:03.869 -05 000000022 INF: ====================================== 15-12-21 22:40:03.870 -05 000000082 INF: ===================Camera Arm TDI=================== 15-12-21 22:40:03.870 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:40:03.871 -05 000000034 INF: ====================================== 15-12-21 22:40:03.871 -05 000000024 INF: ====================================== 15-12-21 22:40:03.872 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:40:03.887 -05 000000063 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:40:03.887 -05 000000047 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:40:03.888 -05 000000063 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:40:03.888 -05 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:40:03.888 -05 000000063 INF: ====================================== 15-12-21 22:40:03.889 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:03.889 -05 000000078 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:40:03.891 -05 000000033 INF: Y Motor: Xmit 1G\n 15-12-21 22:40:03.906 -05 000000078 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:40:03.953 -05 000000079 INF: FPGA: Recv ZSEL 15-12-21 22:40:03.954 -05 000000078 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:40:03.954 -05 000000047 INF: ====================================== 15-12-21 22:40:03.955 -05 000000033 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:40:03.955 -05 000000078 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:03.955 -05 000000087 INF: ====================================== 15-12-21 22:40:03.956 -05 000000056 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:40:03.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:03.956 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:03.956 -05 000000056 INF: X Motor: Xmit PR VI\n 15-12-21 22:40:03.958 -05 000000078 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:40:03.958 -05 000000078 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:40:03.958 -05 000000078 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:40:03.964 -05 000000081 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:40:03.969 -05 000000081 INF: ====================================== 15-12-21 22:40:03.970 -05 000000028 INF: ====================================== 15-12-21 22:40:04.015 -05 000000024 INF: FPGA: Recv ZSTEP 15-12-21 22:40:04.016 -05 000000033 INF: Y Motor: Recv 1G\r\n 15-12-21 22:40:04.016 -05 000000078 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:04.017 -05 000000056 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:40:04.017 -05 000000056 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:40:04.017 -05 000000033 INF: Y Motor: Xmit 1D\n 15-12-21 22:40:04.017 -05 000000056 INF: X Motor: Moving to 13.6440 mm @15.000 mm/sec, started at 12.8696 mm 15-12-21 22:40:04.017 -05 000000056 INF: X Motor: Xmit MA -18578\n 15-12-21 22:40:04.024 -05 000000078 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:40:04.028 -05 000000078 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:04.042 -05 000000078 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:40:04.042 -05 000000078 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:40:04.042 -05 000000078 INF: Z Motor: Arming to move to -0.0710 mm 15-12-21 22:40:04.042 -05 000000078 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:40:04.074 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:04.077 -05 000000068 INF: FPGA: Recv ZYT 15-12-21 22:40:04.077 -05 000000078 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907647 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:40:04.078 -05 000000078 INF: FPGA: Xmit ZARM 18619\n 15-12-21 22:40:04.078 -05 000000033 INF: Y Motor: Recv 1D\r\n 15-12-21 22:40:04.079 -05 000000056 INF: X Motor: Recv MA -18578\r\n> 15-12-21 22:40:04.079 -05 000000033 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:40:04.079 -05 000000056 INF: X Motor: WaitUntilStopped 60052 15-12-21 22:40:04.080 -05 000000033 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:40:04.139 -05 000000024 INF: FPGA: Recv ZARM 15-12-21 22:40:04.139 -05 000000078 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 61.2872 ms 15-12-21 22:40:04.139 -05 000000078 INF: Z Motor: ArmAbsStepped took 96.9034 ms 15-12-21 22:40:04.140 -05 000000078 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:04.141 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:04.141 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:04.143 -05 000000078 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:04.146 -05 000000078 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:40:04.147 -05 000000078 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:04.150 -05 000000078 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:40:04.150 -05 000000078 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:04.153 -05 000000078 INF: ====================================== 15-12-21 22:40:04.565 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:04.566 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 22:40:04.567 -05 000000056 INF: X Motor: Xmit PR ER\n 15-12-21 22:40:04.649 -05 000000056 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:40:04.649 -05 000000056 INF: X Motor: Moved to 13.6436 after 570 ms 15-12-21 22:40:04.652 -05 000000056 INF: ====================================== 15-12-21 22:40:05.155 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:05.287 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.793C:A1\r\n 15-12-21 22:40:05.287 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:05.551 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:05.566 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:05.567 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 22:40:05.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:05.619 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:05.723 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:05.734 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:05.734 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:05.741 -05 000000082 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:40:05.741 -05 000000082 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:40:05.741 -05 000000082 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:40:05.862 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:05.970 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:05.970 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:06.567 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:06.568 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 22:40:06.650 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:06.702 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.983C:A1\r\n 15-12-21 22:40:06.702 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:07.240 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:07.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:07.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:07.366 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:07.388 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:07.388 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:07.400 -05 000000082 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:40:07.401 -05 000000082 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:40:07.401 -05 000000082 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:40:07.403 -05 000000082 INF: ====================================== 15-12-21 22:40:07.405 -05 000000049 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:07.412 -05 000000049 INF: ====================================== 15-12-21 22:40:07.484 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:07.504 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:07.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:07.505 -05 000000062 INF: WaitCommand(5000) end 15-12-21 22:40:07.505 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:07.507 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:07.511 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:07.514 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:07.514 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:07.515 -05 000000047 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:40:07.515 -05 000000037 INF: ===================WaitCommand=================== 15-12-21 22:40:07.515 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:07.516 -05 000000037 INF: WaitCommand(15000) start 15-12-21 22:40:07.521 -05 000000037 INF: ===================Delay 15 of 15 seconds left=================== 15-12-21 22:40:07.572 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:07.674 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:07.761 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:07.829 -05 000000033 INF: Y Motor: Moved to 70.6885 after 3750 ms 15-12-21 22:40:07.830 -05 000000033 INF: ====================================== 15-12-21 22:40:07.832 -05 000000054 INF: ===================Move X,Y=================== 15-12-21 22:40:07.841 -05 000000054 INF: ====================================== 15-12-21 22:40:07.843 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:07.852 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:07.853 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:40:07.861 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:40:07.884 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:40:07.885 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:40:07.947 -05 000000049 INF: FPGA: Recv ZFREQCL 15-12-21 22:40:07.948 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0`25728 (0x03)\r\n(0xFF) 15-12-21 22:40:07.948 -05 000000047 INF: Current Position of Pump is: 25728 15-12-21 22:40:07.948 -05 000000047 INF: Dispense Steps 48000 is greater than steps to home syringe 25728, reducing number of steps to 25728 15-12-21 22:40:07.948 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:40:07.948 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:07.948 -05 000000047 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:40:07.949 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:40:08.009 -05 000000058 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:40:08.009 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:40:08.010 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:08.011 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:08.018 -05 000000088 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:40:08.021 -05 000000063 INF: ===================TDI FPGA Arm=================== 15-12-21 22:40:08.021 -05 000000088 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:40:08.026 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:08.031 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:40:08.031 -05 000000063 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:40:08.048 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD25728R\r 15-12-21 22:40:08.071 -05 000000049 INF: FPGA: Recv TDIYPOS 15-12-21 22:40:08.072 -05 000000088 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:40:08.072 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:08.073 -05 000000088 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:40:08.073 -05 000000088 INF: ====================================== 15-12-21 22:40:08.079 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:40:08.082 -05 000000063 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:40:08.135 -05 000000078 INF: FPGA: Recv TDIYARM3 15-12-21 22:40:08.136 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:08.136 -05 000000063 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:08.138 -05 000000063 INF: ===================TDI FPGA Arm=================== 15-12-21 22:40:08.140 -05 000000063 INF: ====================================== 15-12-21 22:40:08.150 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:08.152 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:08.152 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:08.157 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:08.162 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:08.164 -05 000000055 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:40:08.167 -05 000000055 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:40:08.167 -05 000000055 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:40:08.167 -05 000000055 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:40:08.168 -05 000000055 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:40:08.168 -05 000000033 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:40:08.171 -05 000000033 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:40:08.171 -05 000000033 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:40:08.171 -05 000000033 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:40:08.172 -05 000000033 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:40:08.236 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:08.320 -05 000000023 INF: FPGA: Recv EX1MV 15-12-21 22:40:08.320 -05 000000033 INF: Excitation Filter 1: Moved -36 steps in 149.0235 ms 15-12-21 22:40:08.320 -05 000000033 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 149.1774 ms 15-12-21 22:40:08.320 -05 000000033 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 149.2777 ms 15-12-21 22:40:08.321 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:08.321 -05 000000033 INF: ====================================== 15-12-21 22:40:08.521 -05 000000037 INF: ===================Delay 14 of 15 seconds left=================== 15-12-21 22:40:08.541 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:08.573 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:08.575 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 22:40:08.575 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:08.575 -05 000000068 INF: FPGA: Recv EX2MV 15-12-21 22:40:08.575 -05 000000055 INF: Excitation Filter 2: Moved -107 steps in 407.4311 ms 15-12-21 22:40:08.575 -05 000000055 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 407.6106 ms 15-12-21 22:40:08.575 -05 000000055 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 407.69 ms 15-12-21 22:40:08.576 -05 000000055 INF: ====================================== 15-12-21 22:40:08.579 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:08.585 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:08.612 -05 000000022 INF: ===================FPGA Z Wait=================== 15-12-21 22:40:08.617 -05 000000022 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:40:08.654 -05 000000058 INF: ===================Camera TDI=================== 15-12-21 22:40:08.656 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:08.656 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:08.657 -05 000000033 INF: ===================Move Y Motor without settling=================== 15-12-21 22:40:08.657 -05 000000033 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:40:08.658 -05 000000033 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:40:08.659 -05 000000058 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:40:08.660 -05 000000033 INF: Y Motor: Xmit 1G\n 15-12-21 22:40:08.661 -05 000000049 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:40:08.661 -05 000000049 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:40:08.661 -05 000000068 INF: ===================Camera TDI=================== 15-12-21 22:40:08.663 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 22:40:08.712 -05 000000033 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:40:08.713 -05 000000033 INF: Y Motor: Recv 1G\r\n 15-12-21 22:40:08.728 -05 000000033 INF: Y Motor: Xmit 1D\n 15-12-21 22:40:08.776 -05 000000033 INF: Y Motor: Recv 1D\r\n 15-12-21 22:40:08.784 -05 000000033 INF: Y Motor: Recv *407662\r\n 15-12-21 22:40:08.785 -05 000000033 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:40:08.907 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:08.941 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:08.961 -05 000000085 INF: FPGA: Recv ZWAIT 15-12-21 22:40:08.962 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:08.962 -05 000000022 INF: ====================================== 15-12-21 22:40:08.963 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:08.963 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:09.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:09.089 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:09.089 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:09.143 -05 000000023 INF: ===================Frame #3=================== 15-12-21 22:40:09.144 -05 000000068 INF: ===================Frame #3=================== 15-12-21 22:40:09.185 -05 000000077 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2108=================== 15-12-21 22:40:09.208 -05 000000038 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106=================== 15-12-21 22:40:09.212 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:09.238 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:09.245 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:09.246 -05 000000060 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109, Registering and Extracting C044 L001 T2110=================== 15-12-21 22:40:09.246 -05 000000089 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109, Registering and Extracting C044 L001 T2110=================== 15-12-21 22:40:09.291 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:09.291 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:09.295 -05 000000068 INF: ===================Frame #15=================== 15-12-21 22:40:09.298 -05 000000023 INF: ===================Frame #15=================== 15-12-21 22:40:09.383 -05 000000040 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109=================== 15-12-21 22:40:09.446 -05 000000068 INF: ===================Frame #27=================== 15-12-21 22:40:09.447 -05 000000075 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109, Registering and Extracting C044 L001 T2111=================== 15-12-21 22:40:09.449 -05 000000023 INF: ===================Frame #27=================== 15-12-21 22:40:09.529 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:09.530 -05 000000037 INF: ===================Delay 13 of 15 seconds left=================== 15-12-21 22:40:09.561 -05 000000051 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109=================== 15-12-21 22:40:09.596 -05 000000068 INF: ===================Frame #39=================== 15-12-21 22:40:09.603 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:09.603 -05 000000023 INF: ===================Frame #39=================== 15-12-21 22:40:09.647 -05 000000071 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109, Registering and Extracting C044 L001 T2112=================== 15-12-21 22:40:09.747 -05 000000068 INF: ===================Frame #50=================== 15-12-21 22:40:09.753 -05 000000023 INF: ===================Frame #51=================== 15-12-21 22:40:09.790 -05 000000048 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109=================== 15-12-21 22:40:09.846 -05 000000094 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109, Registering and Extracting C044 L001 T2113=================== 15-12-21 22:40:09.853 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:09.904 -05 000000023 INF: ===================Frame #63=================== 15-12-21 22:40:09.914 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:10.011 -05 000000027 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109=================== 15-12-21 22:40:10.046 -05 000000065 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109, Registering and Extracting C044 L001 T2114=================== 15-12-21 22:40:10.055 -05 000000023 INF: ===================Frame #75=================== 15-12-21 22:40:10.164 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:10.204 -05 000000068 INF: ===================Frame #87=================== 15-12-21 22:40:10.205 -05 000000023 INF: ===================Frame #87=================== 15-12-21 22:40:10.225 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:10.337 -05 000000066 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109=================== 15-12-21 22:40:10.346 -05 000000009 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109, Registering and Extracting C044 L001 T2115=================== 15-12-21 22:40:10.355 -05 000000023 INF: ===================Frame #99=================== 15-12-21 22:40:10.355 -05 000000068 INF: ===================Frame #98=================== 15-12-21 22:40:10.384 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:10.403 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.888C:A1\r\n 15-12-21 22:40:10.403 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:10.497 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:10.506 -05 000000023 INF: ===================Frame #110=================== 15-12-21 22:40:10.525 -05 000000011 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109=================== 15-12-21 22:40:10.530 -05 000000037 INF: ===================Delay 12 of 15 seconds left=================== 15-12-21 22:40:10.573 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:10.575 -05 000000074 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109, Registering and Extracting C044 L001 T2116=================== 15-12-21 22:40:10.711 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:10.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:10.775 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:10.823 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:10.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:10.882 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:10.961 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:10.961 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:10.982 -05 000000068 INF: ===================Frame #148=================== 15-12-21 22:40:11.066 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:11.135 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:11.135 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:11.136 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:11.262 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:11.512 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:11.530 -05 000000037 INF: ===================Delay 11 of 15 seconds left=================== 15-12-21 22:40:11.583 -05 000000068 INF: ===================Frame #196=================== 15-12-21 22:40:11.584 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:11.590 -05 000000023 INF: ===================Frame #196=================== 15-12-21 22:40:11.821 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:11.834 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:11.853 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.992C:A1\r\n 15-12-21 22:40:11.853 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:11.938 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:11.938 -05 000000047 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:40:11.939 -05 000000047 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:40:12.038 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:40:12.111 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:12.211 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:12.336 -05 000000068 INF: ===================Frame #255=================== 15-12-21 22:40:12.342 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:12.488 -05 000000068 INF: ===================Frame #267=================== 15-12-21 22:40:12.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:12.531 -05 000000037 INF: ===================Delay 10 of 15 seconds left=================== 15-12-21 22:40:12.580 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:12.580 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:12.592 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:12.640 -05 000000068 INF: ===================Frame #279=================== 15-12-21 22:40:12.644 -05 000000047 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:12.644 -05 000000047 INF: ====================================== 15-12-21 22:40:12.700 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:12.728 -05 000000023 INF: ===================Frame #286=================== 15-12-21 22:40:12.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:12.768 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:12.791 -05 000000068 INF: ===================Frame #291=================== 15-12-21 22:40:12.880 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:12.942 -05 000000068 INF: ===================Frame #303=================== 15-12-21 22:40:12.957 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:12.957 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:13.093 -05 000000068 INF: ===================Frame #315=================== 15-12-21 22:40:13.244 -05 000000068 INF: ===================Frame #327=================== 15-12-21 22:40:13.347 -05 000000023 INF: ===================Frame #335=================== 15-12-21 22:40:13.394 -05 000000068 INF: ===================Frame #339=================== 15-12-21 22:40:13.499 -05 000000023 INF: ===================Frame #347=================== 15-12-21 22:40:13.531 -05 000000037 INF: ===================Delay 9 of 15 seconds left=================== 15-12-21 22:40:13.545 -05 000000068 INF: ===================Frame #351=================== 15-12-21 22:40:13.651 -05 000000023 INF: ===================Frame #359=================== 15-12-21 22:40:13.696 -05 000000068 INF: ===================Frame #363=================== 15-12-21 22:40:13.756 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:13.784 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 22:40:13.784 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:13.801 -05 000000023 INF: ===================Frame #371=================== 15-12-21 22:40:13.846 -05 000000068 INF: ===================Frame #375=================== 15-12-21 22:40:13.952 -05 000000023 INF: ===================Frame #383=================== 15-12-21 22:40:14.003 -05 000000068 INF: ===================Frame #387=================== 15-12-21 22:40:14.103 -05 000000023 INF: ===================Frame #395=================== 15-12-21 22:40:14.153 -05 000000068 INF: ===================Frame #399=================== 15-12-21 22:40:14.202 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:14.221 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:14.221 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:14.221 -05 000000089 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106, Registering and Extracting C044 L001 T2109=================== 15-12-21 22:40:14.256 -05 000000023 INF: ===================Frame #407=================== 15-12-21 22:40:14.304 -05 000000068 INF: ===================Frame #411=================== 15-12-21 22:40:14.331 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:14.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:14.407 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:14.408 -05 000000023 INF: ===================Frame #419=================== 15-12-21 22:40:14.455 -05 000000068 INF: ===================Frame #423=================== 15-12-21 22:40:14.509 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:14.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:14.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:14.532 -05 000000037 INF: ===================Delay 8 of 15 seconds left=================== 15-12-21 22:40:14.559 -05 000000023 INF: ===================Frame #431=================== 15-12-21 22:40:14.566 -05 000000075 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105, Registering and Extracting C044 L001 T2106=================== 15-12-21 22:40:14.605 -05 000000068 INF: ===================Frame #435=================== 15-12-21 22:40:14.709 -05 000000023 INF: ===================Frame #443=================== 15-12-21 22:40:14.756 -05 000000068 INF: ===================Frame #446=================== 15-12-21 22:40:14.860 -05 000000023 INF: ===================Frame #455=================== 15-12-21 22:40:14.892 -05 000000060 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104, Registering and Extracting C044 L001 T2105=================== 15-12-21 22:40:14.991 -05 000000071 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103, Registering and Extracting C044 L001 T2104=================== 15-12-21 22:40:15.011 -05 000000023 INF: ===================Frame #467=================== 15-12-21 22:40:15.059 -05 000000094 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102, Registering and Extracting C044 L001 T2103=================== 15-12-21 22:40:15.163 -05 000000023 INF: ===================Frame #479=================== 15-12-21 22:40:15.313 -05 000000023 INF: ===================Frame #491=================== 15-12-21 22:40:15.406 -05 000000068 INF: ===================Frame #498=================== 15-12-21 22:40:15.463 -05 000000023 INF: ===================Frame #502=================== 15-12-21 22:40:15.531 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:15.533 -05 000000037 INF: ===================Delay 7 of 15 seconds left=================== 15-12-21 22:40:15.592 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.998C:A1\r\n 15-12-21 22:40:15.592 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:15.625 -05 000000068 INF: ===================Frame #515=================== 15-12-21 22:40:15.779 -05 000000068 INF: ===================Frame #527=================== 15-12-21 22:40:15.820 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:15.843 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:15.843 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:15.878 -05 000000065 INF: ===================Registering and Extracting C044 L001 T2101, Registering and Extracting C044 L001 T2102=================== 15-12-21 22:40:15.909 -05 000000023 INF: ===================Frame #538=================== 15-12-21 22:40:15.930 -05 000000068 INF: ===================Frame #539=================== 15-12-21 22:40:15.947 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:15.967 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:15.967 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:16.070 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:16.080 -05 000000068 INF: ===================Frame #551=================== 15-12-21 22:40:16.092 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:16.092 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:16.100 -05 000000074 INF: ===================Registering and Extracting C044 L001 T2101=================== 15-12-21 22:40:16.104 -05 000000023 INF: ===================Frame #553=================== 15-12-21 22:40:16.121 -05 000000009 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:40:16.161 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:16.170 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:40:16.231 -05 000000068 INF: ===================Frame #563=================== 15-12-21 22:40:16.254 -05 000000023 INF: ===================Frame #565=================== 15-12-21 22:40:16.298 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:16.304 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:40:16.382 -05 000000068 INF: ===================Frame #575=================== 15-12-21 22:40:16.389 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:16.397 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:40:16.404 -05 000000023 INF: ===================Frame #577=================== 15-12-21 22:40:16.500 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:16.505 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:40:16.533 -05 000000037 INF: ===================Delay 6 of 15 seconds left=================== 15-12-21 22:40:16.533 -05 000000068 INF: ===================Frame #587=================== 15-12-21 22:40:16.554 -05 000000023 INF: ===================Frame #589=================== 15-12-21 22:40:16.602 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:16.683 -05 000000068 INF: ===================Frame #599=================== 15-12-21 22:40:16.704 -05 000000023 INF: ===================Frame #600=================== 15-12-21 22:40:16.834 -05 000000068 INF: ===================Frame #611=================== 15-12-21 22:40:16.981 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:16.984 -05 000000068 INF: ===================Frame #623=================== 15-12-21 22:40:17.002 -05 000000023 INF: ===================Frame #624=================== 15-12-21 22:40:17.026 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.022C:A1\r\n 15-12-21 22:40:17.026 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:17.135 -05 000000068 INF: ===================Frame #635=================== 15-12-21 22:40:17.215 -05 000000023 INF: ===================Frame #641=================== 15-12-21 22:40:17.285 -05 000000068 INF: ===================Frame #646=================== 15-12-21 22:40:17.318 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:17.339 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:17.339 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:17.366 -05 000000023 INF: ===================Frame #653=================== 15-12-21 22:40:17.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:17.465 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:17.465 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:17.468 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:40:17.516 -05 000000023 INF: ===================Frame #665=================== 15-12-21 22:40:17.533 -05 000000037 INF: ===================Delay 5 of 15 seconds left=================== 15-12-21 22:40:17.575 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:17.588 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:17.588 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:17.666 -05 000000023 INF: ===================Frame #677=================== 15-12-21 22:40:17.667 -05 000000068 INF: ===================Frame #677=================== 15-12-21 22:40:17.816 -05 000000023 INF: ===================Frame #688=================== 15-12-21 22:40:17.817 -05 000000068 INF: ===================Frame #688=================== 15-12-21 22:40:18.049 -05 000000068 INF: ===================Frame #707=================== 15-12-21 22:40:18.079 -05 000000023 INF: ===================Frame #709=================== 15-12-21 22:40:18.199 -05 000000068 INF: ===================Frame #719=================== 15-12-21 22:40:18.229 -05 000000023 INF: ===================Frame #721=================== 15-12-21 22:40:18.349 -05 000000068 INF: ===================Frame #731=================== 15-12-21 22:40:18.379 -05 000000023 INF: ===================Frame #733=================== 15-12-21 22:40:18.499 -05 000000068 INF: ===================Frame #742=================== 15-12-21 22:40:18.530 -05 000000023 INF: ===================Frame #745=================== 15-12-21 22:40:18.533 -05 000000037 INF: ===================Delay 4 of 15 seconds left=================== 15-12-21 22:40:18.680 -05 000000023 INF: ===================Frame #757=================== 15-12-21 22:40:18.710 -05 000000068 INF: ===================Frame #759=================== 15-12-21 22:40:18.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:18.830 -05 000000023 INF: ===================Frame #769=================== 15-12-21 22:40:18.836 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:18.836 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:18.860 -05 000000068 INF: ===================Frame #771=================== 15-12-21 22:40:18.941 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:18.963 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 22:40:18.963 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:18.985 -05 000000023 INF: ===================Frame #780=================== 15-12-21 22:40:19.010 -05 000000068 INF: ===================Frame #783=================== 15-12-21 22:40:19.075 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:19.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:19.087 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:19.160 -05 000000068 INF: ===================Frame #795=================== 15-12-21 22:40:19.193 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:19.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:19.275 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:19.293 -05 000000023 INF: ===================Frame #805=================== 15-12-21 22:40:19.310 -05 000000068 INF: ===================Frame #807=================== 15-12-21 22:40:19.443 -05 000000023 INF: ===================Frame #817=================== 15-12-21 22:40:19.460 -05 000000068 INF: ===================Frame #818=================== 15-12-21 22:40:19.533 -05 000000037 INF: ===================Delay 3 of 15 seconds left=================== 15-12-21 22:40:19.594 -05 000000023 INF: ===================Frame #829=================== 15-12-21 22:40:19.728 -05 000000068 INF: ===================Frame #840=================== 15-12-21 22:40:19.746 -05 000000023 INF: ===================Frame #841=================== 15-12-21 22:40:19.896 -05 000000023 INF: ===================Frame #853=================== 15-12-21 22:40:19.910 -05 000000068 INF: ===================Frame #854=================== 15-12-21 22:40:20.046 -05 000000023 INF: ===================Frame #865=================== 15-12-21 22:40:20.078 -05 000000068 INF: ===================Frame #867=================== 15-12-21 22:40:20.196 -05 000000023 INF: ===================Frame #877=================== 15-12-21 22:40:20.228 -05 000000068 INF: ===================Frame #879=================== 15-12-21 22:40:20.346 -05 000000023 INF: ===================Frame #888=================== 15-12-21 22:40:20.378 -05 000000068 INF: ===================Frame #891=================== 15-12-21 22:40:20.504 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:20.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:20.520 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:20.528 -05 000000068 INF: ===================Frame #903=================== 15-12-21 22:40:20.533 -05 000000037 INF: ===================Delay 2 of 15 seconds left=================== 15-12-21 22:40:20.628 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:20.632 -05 000000023 INF: ===================Frame #911=================== 15-12-21 22:40:20.647 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:20.647 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:20.678 -05 000000068 INF: ===================Frame #915=================== 15-12-21 22:40:20.753 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:20.772 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.020C:A1\r\n 15-12-21 22:40:20.772 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:20.782 -05 000000023 INF: ===================Frame #923=================== 15-12-21 22:40:20.828 -05 000000068 INF: ===================Frame #927=================== 15-12-21 22:40:20.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:20.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:20.895 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:20.932 -05 000000023 INF: ===================Frame #935=================== 15-12-21 22:40:20.978 -05 000000068 INF: ===================Frame #938=================== 15-12-21 22:40:21.082 -05 000000023 INF: ===================Frame #947=================== 15-12-21 22:40:21.232 -05 000000023 INF: ===================Frame #958=================== 15-12-21 22:40:21.251 -05 000000068 INF: ===================Frame #960=================== 15-12-21 22:40:21.441 -05 000000068 INF: ===================Frame #975=================== 15-12-21 22:40:21.482 -05 000000023 INF: ===================Frame #978=================== 15-12-21 22:40:21.533 -05 000000037 INF: ===================Delay 1 of 15 seconds left=================== 15-12-21 22:40:21.593 -05 000000068 INF: ===================Frame #987=================== 15-12-21 22:40:21.660 -05 000000023 INF: ===================Frame #992=================== 15-12-21 22:40:21.743 -05 000000068 INF: ===================Frame #999=================== 15-12-21 22:40:21.827 -05 000000023 INF: ===================Frame #1006=================== 15-12-21 22:40:21.893 -05 000000068 INF: ===================Frame #1011=================== 15-12-21 22:40:21.999 -05 000000023 INF: ===================Frame #1019=================== 15-12-21 22:40:22.043 -05 000000068 INF: ===================Frame #1023=================== 15-12-21 22:40:22.120 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:22.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:22.145 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:22.149 -05 000000023 INF: ===================Frame #1031=================== 15-12-21 22:40:22.193 -05 000000068 INF: ===================Frame #1034=================== 15-12-21 22:40:22.249 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:22.269 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.992C:A1\r\n 15-12-21 22:40:22.269 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:22.299 -05 000000023 INF: ===================Frame #1043=================== 15-12-21 22:40:22.374 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:22.393 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:22.393 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:22.450 -05 000000068 INF: ===================Frame #1055=================== 15-12-21 22:40:22.450 -05 000000023 INF: ===================Frame #1055=================== 15-12-21 22:40:22.499 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:22.516 -05 000000037 INF: ===================WaitCommand=================== 15-12-21 22:40:22.516 -05 000000037 INF: WaitCommand(15000) end 15-12-21 22:40:22.516 -05 000000037 INF: ====================================== 15-12-21 22:40:22.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:22.517 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:22.519 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:22.522 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:22.525 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:22.525 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:22.599 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:22.601 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Selecting Reagent USB (5)=================== 15-12-21 22:40:22.602 -05 000000068 INF: ===================Frame #1067=================== 15-12-21 22:40:22.604 -05 000000023 INF: ===================Frame #1067=================== 15-12-21 22:40:22.605 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:22.607 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:40:22.677 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:22.786 -05 000000068 INF: ===================Frame #1081=================== 15-12-21 22:40:22.787 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:40:22.787 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:22.788 -05 000000023 INF: ===================Frame #1081=================== 15-12-21 22:40:22.956 -05 000000023 INF: ===================Frame #1093=================== 15-12-21 22:40:22.956 -05 000000068 INF: ===================Frame #1093=================== 15-12-21 22:40:23.203 -05 000000068 INF: ===================Frame #1110=================== 15-12-21 22:40:23.214 -05 000000023 INF: ===================Frame #1110=================== 15-12-21 22:40:23.300 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:40:23.363 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:40:23.363 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:23.480 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:23.547 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:40:23.547 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:23.656 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:23.656 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:40:23.658 -05 000000068 INF: ===================Frame #1150=================== 15-12-21 22:40:23.696 -05 000000023 INF: ===================Frame #1153=================== 15-12-21 22:40:23.701 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:23.733 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:23.748 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 5, aspirate port PortB, aspiration rate 1500, dispense rate 2500, volume 120, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:40:23.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:23.833 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:40:23.847 -05 000000023 INF: ===================Frame #1165=================== 15-12-21 22:40:23.854 -05 000000068 INF: ===================Frame #1166=================== 15-12-21 22:40:23.860 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:23.860 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:23.922 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`0 (0x03)\r\n(0xFF) 15-12-21 22:40:23.922 -05 000000062 INF: Current Position of Pump is: 0 15-12-21 22:40:23.923 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:40:23.962 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:23.986 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:23.986 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:23.997 -05 000000023 INF: ===================Frame #1177=================== 15-12-21 22:40:24.022 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V4800s231P23040R\r 15-12-21 22:40:24.026 -05 000000068 INF: ===================Frame #1179=================== 15-12-21 22:40:24.095 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:24.108 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:24.109 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:40:24.109 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:24.149 -05 000000023 INF: ===================Frame #1189=================== 15-12-21 22:40:24.176 -05 000000068 INF: ===================Frame #1191=================== 15-12-21 22:40:24.208 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:24.212 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:24.234 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:24.234 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:24.295 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:24.299 -05 000000023 INF: ===================Frame #1201=================== 15-12-21 22:40:24.326 -05 000000068 INF: ===================Frame #1203=================== 15-12-21 22:40:24.449 -05 000000023 INF: ===================Frame #1213=================== 15-12-21 22:40:24.477 -05 000000068 INF: ===================Frame #1215=================== 15-12-21 22:40:24.545 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:24.600 -05 000000023 INF: ===================Frame #1225=================== 15-12-21 22:40:24.609 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:24.627 -05 000000068 INF: ===================Frame #1227=================== 15-12-21 22:40:24.750 -05 000000023 INF: ===================Frame #1237=================== 15-12-21 22:40:24.777 -05 000000068 INF: ===================Frame #1239=================== 15-12-21 22:40:24.859 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:24.900 -05 000000023 INF: ===================Frame #1248=================== 15-12-21 22:40:24.919 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:24.927 -05 000000068 INF: ===================Frame #1250=================== 15-12-21 22:40:24.964 -05 000000036 INF: FPGA: Recv TDIYWAIT 15-12-21 22:40:24.965 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:24.969 -05 000000049 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:40:24.978 -05 000000088 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:40:24.978 -05 000000095 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:40:24.980 -05 000000088 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:40:24.980 -05 000000088 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:40:24.980 -05 000000088 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:40:24.980 -05 000000088 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:40:24.984 -05 000000095 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:40:24.984 -05 000000095 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:40:24.984 -05 000000095 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:40:24.986 -05 000000095 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:40:25.129 -05 000000079 INF: FPGA: Recv EX1MV 15-12-21 22:40:25.130 -05 000000088 INF: Excitation Filter 1: Moved 36 steps in 149.6156 ms 15-12-21 22:40:25.130 -05 000000088 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 149.7272 ms 15-12-21 22:40:25.130 -05 000000088 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 149.8115 ms 15-12-21 22:40:25.131 -05 000000088 INF: ====================================== 15-12-21 22:40:25.176 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:25.223 -05 000000068 INF: Camera complete - got 1250 frames. 15-12-21 22:40:25.224 -05 000000068 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:40:25.248 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:25.359 -05 000000068 INF: ===================Camera TDI=================== 15-12-21 22:40:25.371 -05 000000028 INF: FPGA: Recv EX2MV 15-12-21 22:40:25.371 -05 000000095 INF: Excitation Filter 2: Moved 107 steps in 386.6579 ms 15-12-21 22:40:25.371 -05 000000095 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 387.0061 ms 15-12-21 22:40:25.371 -05 000000095 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 390.5731 ms 15-12-21 22:40:25.371 -05 000000095 INF: ====================================== 15-12-21 22:40:25.374 -05 000000049 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:25.378 -05 000000049 INF: ====================================== 15-12-21 22:40:25.388 -05 000000068 INF: ====================================== 15-12-21 22:40:25.428 -05 000000023 INF: ===================Frame #1250=================== 15-12-21 22:40:25.431 -05 000000023 INF: Camera complete - got 1250 frames. 15-12-21 22:40:25.432 -05 000000023 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:40:25.517 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:25.518 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:25.576 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:25.577 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:25.577 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:25.617 -05 000000023 INF: ===================Camera TDI=================== 15-12-21 22:40:25.640 -05 000000023 INF: ====================================== 15-12-21 22:40:25.643 -05 000000058 INF: ===================Camera TDI=================== 15-12-21 22:40:25.648 -05 000000058 INF: ====================================== 15-12-21 22:40:25.683 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:25.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:25.701 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:25.702 -05 000000033 INF: Y Motor: Moved to 9.0764 after 16917 ms 15-12-21 22:40:25.702 -05 000000033 INF: ====================================== 15-12-21 22:40:25.706 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:25.707 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:25.708 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:25.709 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:40:25.782 -05 000000087 INF: FPGA: Recv TDICLINES 10137 15-12-21 22:40:25.782 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:40:25.826 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:25.849 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:25.851 -05 000000058 INF: FPGA: Recv TDIYERD 907646 15-12-21 22:40:25.851 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:40:25.902 -05 000000024 INF: FPGA: Recv ZADCR 24107 15-12-21 22:40:25.902 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.092. Y moved -60.304 mm 15-12-21 22:40:25.902 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:40:25.903 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:25.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:25.904 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:25.963 -05 000000054 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:40:25.963 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:40:25.963 -05 000000057 INF: TDIScan finished after 22174.1611 ms 15-12-21 22:40:25.963 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:40:25.963 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:40:25.965 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:25.995 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.119 um 15-12-21 22:40:25.996 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.005 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:26.005 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.011 -05 000000036 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:40:26.014 -05 000000082 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:40:26.015 -05 000000036 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:40:26.015 -05 000000028 INF: ===================Dither Clean Up Command=================== 15-12-21 22:40:26.015 -05 000000023 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:40:26.015 -05 000000023 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:40:26.015 -05 000000023 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:40:26.019 -05 000000079 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:40:26.021 -05 000000037 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:26.021 -05 000000079 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:40:26.024 -05 000000037 INF: ===================LFT:Extracting coords=================== 15-12-21 22:40:26.027 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 65.034C:A1\r\n 15-12-21 22:40:26.027 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:26.053 -05 000000037 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:26.054 -05 000000037 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:40:26.061 -05 000000080 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:26.061 -05 000000047 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:26.063 -05 000000087 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:26.063 -05 000000080 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:26.063 -05 000000047 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:26.063 -05 000000087 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:26.068 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:26.069 -05 000000090 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:26.087 -05 000000022 INF: FPGA: Recv ZSTEP 15-12-21 22:40:26.087 -05 000000022 INF: FPGA: Recv ZSEL 15-12-21 22:40:26.087 -05 000000079 INF: FPGA: Xmit ZDACW 29105\n 15-12-21 22:40:26.088 -05 000000036 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:40:26.088 -05 000000023 INF: ====================================== 15-12-21 22:40:26.089 -05 000000036 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:40:26.089 -05 000000082 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:40:26.089 -05 000000036 INF: ====================================== 15-12-21 22:40:26.151 -05 000000055 INF: FPGA: Recv ZDACW 15-12-21 22:40:26.152 -05 000000082 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:40:26.152 -05 000000079 INF: ====================================== 15-12-21 22:40:26.153 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:26.153 -05 000000082 INF: ====================================== 15-12-21 22:40:26.214 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:26.243 -05 000000047 INF: LFT found best fwhm score 2.652647 in 128 ms 15-12-21 22:40:26.243 -05 000000087 INF: LFT found best fwhm score 2.749335 in 128 ms 15-12-21 22:40:26.243 -05 000000087 INF: LFT found good score at index 5581 with fwhm value 2.749335. Next cycle, cycle 45 starting Z position for bottom surface is at -0.092 mm FC:A, C:44,L:1,B 15-12-21 22:40:26.243 -05 000000047 INF: LFT found good score at index 1521 with fwhm value 2.652647. Next cycle, cycle 45 starting Z position for bottom surface is at -0.093 mm FC:A, C:44,L:1,B 15-12-21 22:40:26.244 -05 000000080 INF: LFT found best fwhm score 2.510578 in 128 ms 15-12-21 22:40:26.244 -05 000000080 INF: LFT found good score at index 1085 with fwhm value 2.510578. Next cycle, cycle 45 starting Z position for bottom surface is at -0.093 mm FC:A, C:44,L:1,B 15-12-21 22:40:26.244 -05 000000087 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:26.244 -05 000000047 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:26.244 -05 000000080 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:26.244 -05 000000087 INF: ====================================== 15-12-21 22:40:26.244 -05 000000080 INF: ====================================== 15-12-21 22:40:26.244 -05 000000047 INF: ====================================== 15-12-21 22:40:26.261 -05 000000090 INF: LFT found best fwhm score 2.604607 in 143 ms 15-12-21 22:40:26.261 -05 000000090 INF: LFT found good score at index 1253 with fwhm value 2.604607. Next cycle, cycle 45 starting Z position for bottom surface is at -0.093 mm FC:A, C:44,L:1,B 15-12-21 22:40:26.262 -05 000000090 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:26.263 -05 000000090 INF: ====================================== 15-12-21 22:40:26.269 -05 000000037 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:26.270 -05 000000037 INF: LFT weighted average best Z for bottom surface is at -0.092mm FC:A, C:44,L:1,B 15-12-21 22:40:26.274 -05 000000037 INF: ====================================== 15-12-21 22:40:26.276 -05 000000028 INF: ====================================== 15-12-21 22:40:26.279 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.280 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:40:26.282 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.282 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:40:26.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:40:26.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:40:26.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.283 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:40:26.284 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:40:26.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:40:26.285 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1, Swath 2 - X = 13.644 Y = 39.38=================== 15-12-21 22:40:26.285 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB, Waiting for image analysis=================== 15-12-21 22:40:26.285 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5), Aspirating port PortB=================== 15-12-21 22:40:26.285 -05 000000057 INF: Waited 1 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 1, buffer wait time 0 15-12-21 22:40:26.287 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:40:26.288 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:26.288 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:40:26.289 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:40:26.289 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 1=================== 15-12-21 22:40:26.293 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface=================== 15-12-21 22:40:26.293 -05 000000065 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204=================== 15-12-21 22:40:26.293 -05 000000074 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205=================== 15-12-21 22:40:26.293 -05 000000009 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205=================== 15-12-21 22:40:26.293 -05 000000071 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205=================== 15-12-21 22:40:26.293 -05 000000075 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206=================== 15-12-21 22:40:26.294 -05 000000094 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205=================== 15-12-21 22:40:26.298 -05 000000089 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:26.304 -05 000000060 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2208=================== 15-12-21 22:40:26.324 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:40:26.325 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:40:26.325 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:40:26.333 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:40:26.338 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:40:26.341 -05 000000057 INF: Compensator: Remaining OutOfPath 15-12-21 22:40:26.344 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:40:26.348 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:40:26.512 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:26.519 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:40:26.520 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:40:26.558 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.559 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:40:26.559 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:26.559 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -111.0 um, section = B_1 15-12-21 22:40:26.562 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:26.563 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:26.565 -05 000000047 INF: ===================MoveEmissionFilters=================== 15-12-21 22:40:26.565 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:26.565 -05 000000078 INF: ===================Move X,Y=================== 15-12-21 22:40:26.570 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:40:26.570 -05 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:40:26.570 -05 000000078 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:40:26.570 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:40:26.570 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:40:26.570 -05 000000024 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:40:26.574 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:40:26.574 -05 000000024 INF: Z Motor: Moving to -0.1082 mm, started at -0.1110 mm 15-12-21 22:40:26.574 -05 000000024 INF: FPGA: Xmit ZTRG 0\n 15-12-21 22:40:26.575 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:26.575 -05 000000058 INF: ===================Move Y Motor without settling=================== 15-12-21 22:40:26.575 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:40:26.575 -05 000000058 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:40:26.575 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:40:26.575 -05 000000022 INF: ===================Move X Motor without settling=================== 15-12-21 22:40:26.580 -05 000000022 INF: X Motor: Xmit PR VM\n 15-12-21 22:40:26.580 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:40:26.582 -05 000000058 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:40:26.583 -05 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:40:26.583 -05 000000058 INF: Y Motor: Xmit 1G\n 15-12-21 22:40:26.583 -05 000000063 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:40:26.583 -05 000000034 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:40:26.584 -05 000000033 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:40:26.584 -05 000000090 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:40:26.584 -05 000000085 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:40:26.584 -05 000000034 INF: ====================================== 15-12-21 22:40:26.592 -05 000000028 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:40:26.592 -05 000000085 INF: ====================================== 15-12-21 22:40:26.592 -05 000000028 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:40:26.592 -05 000000063 INF: ====================================== 15-12-21 22:40:26.592 -05 000000029 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:40:26.592 -05 000000055 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:40:26.602 -05 000000028 INF: ====================================== 15-12-21 22:40:26.602 -05 000000033 INF: ====================================== 15-12-21 22:40:26.603 -05 000000055 INF: ====================================== 15-12-21 22:40:26.606 -05 000000029 INF: ====================================== 15-12-21 22:40:26.606 -05 000000082 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:40:26.606 -05 000000090 INF: ====================================== 15-12-21 22:40:26.607 -05 000000079 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:40:26.614 -05 000000081 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:40:26.617 -05 000000082 INF: ====================================== 15-12-21 22:40:26.623 -05 000000087 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:40:26.629 -05 000000079 INF: ====================================== 15-12-21 22:40:26.632 -05 000000081 INF: ====================================== 15-12-21 22:40:26.635 -05 000000028 INF: FPGA: Recv ZTRG 15-12-21 22:40:26.635 -05 000000024 INF: FPGA: Xmit ZYT 0 3\n 15-12-21 22:40:26.635 -05 000000087 INF: ====================================== 15-12-21 22:40:26.643 -05 000000022 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:40:26.643 -05 000000022 INF: X Motor: Xmit PR VI\n 15-12-21 22:40:26.643 -05 000000058 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:40:26.645 -05 000000047 INF: ====================================== 15-12-21 22:40:26.646 -05 000000058 INF: Y Motor: Recv 1G\r\n 15-12-21 22:40:26.647 -05 000000058 INF: Y Motor: Xmit 1D\n 15-12-21 22:40:26.703 -05 000000023 INF: FPGA: Recv ZYT 15-12-21 22:40:26.703 -05 000000024 INF: Z Motor: ZMV will trigger camera immediately and ramp is HW controlled 15-12-21 22:40:26.703 -05 000000024 INF: FPGA: Xmit ZMV 28369\n 15-12-21 22:40:26.704 -05 000000022 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:40:26.704 -05 000000022 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:40:26.704 -05 000000022 INF: X Motor: Moving to 17.1670 mm @15.000 mm/sec, started at 13.6436 mm 15-12-21 22:40:26.704 -05 000000022 INF: X Motor: Xmit MA -17135\n 15-12-21 22:40:26.704 -05 000000058 INF: Y Motor: Recv 1D\r\n 15-12-21 22:40:26.724 -05 000000058 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:40:26.748 -05 000000058 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:40:26.762 -05 000000063 INF: FPGA: Recv ZMV 15-12-21 22:40:26.762 -05 000000024 INF: Z Motor: MoveAndTrigger 'ZMV' command took 59.1703 ms 15-12-21 22:40:26.776 -05 000000024 INF: FPGA: Xmit ZDACR\n 15-12-21 22:40:26.777 -05 000000022 INF: X Motor: Recv MA -17135\r\n> 15-12-21 22:40:26.777 -05 000000022 INF: X Motor: WaitUntilStopped 60235 15-12-21 22:40:26.823 -05 000000090 INF: FPGA: Recv ZDACR 28369 15-12-21 22:40:26.824 -05 000000024 INF: Z Motor: MoveAndTrigger took 250.474 ms w/comms 15-12-21 22:40:26.824 -05 000000024 INF: Z Motor: After move to -0.1082, error = 0.0000, min/max error = 0.0000/0.0000, tolerance = 0.0010 mm, Keep Motor On = False. Keep Brake Off = False 15-12-21 22:40:26.824 -05 000000024 INF: Z Motor: MoveAbsStepped took 250.6109 ms 15-12-21 22:40:26.825 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:26.825 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:26.850 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:40:26.893 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:26.893 -05 000000029 INF: ===================Camera Arm TDI=================== 15-12-21 22:40:26.897 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:26.918 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:26.919 -05 000000079 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:40:26.920 -05 000000079 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:40:26.920 -05 000000079 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:40:26.947 -05 000000034 INF: FPGA: Recv ZSEL 15-12-21 22:40:26.947 -05 000000079 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:40:26.948 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:26.953 -05 000000079 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:40:26.953 -05 000000079 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:40:26.953 -05 000000079 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:40:27.008 -05 000000037 INF: FPGA: Recv ZSTEP 15-12-21 22:40:27.009 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:27.019 -05 000000079 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:40:27.019 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:27.023 -05 000000079 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:40:27.024 -05 000000079 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:40:27.024 -05 000000079 INF: Z Motor: Arming to move to -0.0682 mm 15-12-21 22:40:27.024 -05 000000079 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:40:27.101 -05 000000037 INF: FPGA: Recv ZYT 15-12-21 22:40:27.101 -05 000000079 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 1011359 enc / 10.114 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:40:27.101 -05 000000079 INF: FPGA: Xmit ZARM 17884\n 15-12-21 22:40:27.178 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:27.197 -05 000000056 INF: FPGA: Recv ZARM 15-12-21 22:40:27.197 -05 000000079 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 95.863 ms 15-12-21 22:40:27.197 -05 000000079 INF: Z Motor: ArmAbsStepped took 173.2751 ms 15-12-21 22:40:27.198 -05 000000079 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:27.239 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:27.272 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:27.272 -05 000000079 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:40:27.277 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:27.280 -05 000000079 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:40:27.281 -05 000000079 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:27.283 -05 000000079 INF: ====================================== 15-12-21 22:40:27.325 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:27.385 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:27.385 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:27.510 -05 000000022 INF: X Motor: Xmit PR ER\n 15-12-21 22:40:27.522 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:27.526 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:27.599 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:27.600 -05 000000022 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:40:27.600 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.975C:A1\r\n 15-12-21 22:40:27.600 -05 000000022 INF: X Motor: Moved to 17.1665 after 822 ms 15-12-21 22:40:27.600 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:27.601 -05 000000022 INF: ====================================== 15-12-21 22:40:27.733 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:27.820 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:27.820 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:27.849 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:27.957 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:28.000 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:28.013 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:28.013 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:28.207 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:28.273 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:28.523 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:28.565 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:28.630 -05 000000029 INF: Camera AttachBuffer (imageDataPtr = 8187678768 imgPtr = 8841990192 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:40:28.630 -05 000000029 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:40:28.631 -05 000000029 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:40:28.815 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:28.867 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:29.128 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:29.194 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:29.308 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:29.349 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.994C:A1\r\n 15-12-21 22:40:29.349 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:29.444 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:29.452 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:29.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:29.524 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:29.524 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:29.525 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USB (5)=================== 15-12-21 22:40:29.624 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:40:29.633 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:29.646 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:29.646 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:29.709 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 22:40:29.709 -05 000000062 INF: Current Position of Pump is: 23040 15-12-21 22:40:29.709 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:40:29.756 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:29.772 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:29.772 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:29.809 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:40:29.897 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:29.997 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:30.083 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:30.172 -05 000000029 INF: Camera AttachBuffer (imageDataPtr = 9647296560 imgPtr = 10301607984 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:40:30.172 -05 000000029 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:40:30.172 -05 000000029 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:40:30.174 -05 000000029 INF: ====================================== 15-12-21 22:40:30.181 -05 000000024 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:30.187 -05 000000024 INF: ====================================== 15-12-21 22:40:30.333 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:30.396 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:30.396 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:30.397 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:40:30.397 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:30.459 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:40:30.459 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:30.568 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:40:30.586 -05 000000058 INF: Y Motor: Moved to 70.6885 after 3850 ms 15-12-21 22:40:30.587 -05 000000058 INF: ====================================== 15-12-21 22:40:30.589 -05 000000078 INF: ===================Move X,Y=================== 15-12-21 22:40:30.595 -05 000000078 INF: ====================================== 15-12-21 22:40:30.601 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:30.605 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:30.605 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:40:30.662 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:40:30.667 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:40:30.670 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:40:30.670 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:30.711 -05 000000028 INF: FPGA: Recv ZFREQCL 15-12-21 22:40:30.716 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:40:30.716 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:30.716 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:40:30.767 -05 000000029 INF: FPGA: Recv TDIYERD 7068850 15-12-21 22:40:30.767 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068850 counts (70.689 mm) 15-12-21 22:40:30.768 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:30.769 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:30.770 -05 000000028 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:40:30.770 -05 000000068 INF: ===================TDI FPGA Arm=================== 15-12-21 22:40:30.770 -05 000000028 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:40:30.771 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:30.773 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:40:30.773 -05 000000068 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:40:30.811 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:30.856 -05 000000028 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:40:30.856 -05 000000078 INF: FPGA: Recv TDIYPOS 15-12-21 22:40:30.857 -05 000000028 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:40:30.858 -05 000000028 INF: ====================================== 15-12-21 22:40:30.858 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:30.862 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:40:30.864 -05 000000068 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:40:30.910 -05 000000029 INF: FPGA: Recv TDIYARM3 15-12-21 22:40:30.911 -05 000000068 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:30.913 -05 000000068 INF: ===================TDI FPGA Arm=================== 15-12-21 22:40:30.932 -05 000000068 INF: ====================================== 15-12-21 22:40:30.935 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:30.936 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:30.939 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:30.942 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:30.943 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:30.948 -05 000000063 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:40:30.948 -05 000000023 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:40:30.949 -05 000000063 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:40:30.949 -05 000000063 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:40:30.949 -05 000000063 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:40:30.949 -05 000000063 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:40:30.983 -05 000000023 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:40:30.983 -05 000000023 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:40:30.983 -05 000000023 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:40:30.985 -05 000000023 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:40:31.162 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:31.163 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:31.164 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:31.164 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:31.165 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:31.166 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, FC temperature to 20°=================== 15-12-21 22:40:31.190 -05 000000058 INF: FPGA: Recv EX1MV 15-12-21 22:40:31.190 -05 000000023 INF: Excitation Filter 1: Moved -36 steps in 206.7841 ms 15-12-21 22:40:31.190 -05 000000023 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 206.9368 ms 15-12-21 22:40:31.190 -05 000000023 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 207.1625 ms 15-12-21 22:40:31.191 -05 000000023 INF: ====================================== 15-12-21 22:40:31.363 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:31.392 -05 000000023 INF: FPGA: Recv EX2MV 15-12-21 22:40:31.392 -05 000000063 INF: Excitation Filter 2: Moved -107 steps in 443.2185 ms 15-12-21 22:40:31.392 -05 000000063 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 443.3565 ms 15-12-21 22:40:31.392 -05 000000063 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 443.4579 ms 15-12-21 22:40:31.393 -05 000000063 INF: ====================================== 15-12-21 22:40:31.395 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:31.403 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:31.416 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 64.519C:A1\r\n 15-12-21 22:40:31.417 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:31.418 -05 000000037 INF: ===================FPGA Z Wait=================== 15-12-21 22:40:31.419 -05 000000082 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:31.420 -05 000000037 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:40:31.420 -05 000000058 INF: ===================Camera TDI=================== 15-12-21 22:40:31.420 -05 000000049 INF: ===================Move Y Motor without settling=================== 15-12-21 22:40:31.458 -05 000000049 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6885 mm 15-12-21 22:40:31.459 -05 000000049 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:40:31.461 -05 000000082 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:40:31.461 -05 000000082 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:40:31.463 -05 000000058 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:40:31.468 -05 000000068 INF: ===================Camera TDI=================== 15-12-21 22:40:31.469 -05 000000054 INF: ===================Camera TDI=================== 15-12-21 22:40:31.492 -05 000000049 INF: Y Motor: Xmit 1G\n 15-12-21 22:40:31.571 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEMP:1:20.00\r 15-12-21 22:40:31.584 -05 000000049 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:40:31.639 -05 000000049 INF: Y Motor: Recv 1G\r\n 15-12-21 22:40:31.640 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:40:31.640 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:31.640 -05 000000049 INF: Y Motor: Xmit 1D\n 15-12-21 22:40:31.691 -05 000000049 INF: Y Motor: Recv 1D\r\n 15-12-21 22:40:31.692 -05 000000049 INF: Y Motor: Recv *407662\r\n 15-12-21 22:40:31.693 -05 000000049 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:40:31.757 -05 000000094 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:31.782 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:31.814 -05 000000079 INF: FPGA: Recv ZWAIT 15-12-21 22:40:31.815 -05 000000037 INF: ====================================== 15-12-21 22:40:31.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:31.819 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:31.857 -05 000000011 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2209=================== 15-12-21 22:40:31.937 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit FCTEC:1:1\r 15-12-21 22:40:32.002 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:40:32.002 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:32.054 -05 000000071 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:32.056 -05 000000066 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2210=================== 15-12-21 22:40:32.065 -05 000000065 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:32.088 -05 000000054 INF: ===================Frame #12=================== 15-12-21 22:40:32.090 -05 000000068 INF: ===================Frame #12=================== 15-12-21 22:40:32.109 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:32.109 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:32.110 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:32.112 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:32.113 -05 000000062 INF: WaitCommand(15000) start 15-12-21 22:40:32.113 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 15 of 15 seconds left=================== 15-12-21 22:40:32.126 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:32.126 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:32.157 -05 000000038 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2211=================== 15-12-21 22:40:32.210 -05 000000075 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:32.241 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:32.262 -05 000000077 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2212=================== 15-12-21 22:40:32.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:32.263 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:32.283 -05 000000054 INF: ===================Frame #27=================== 15-12-21 22:40:32.287 -05 000000068 INF: ===================Frame #27=================== 15-12-21 22:40:32.433 -05 000000054 INF: ===================Frame #39=================== 15-12-21 22:40:32.437 -05 000000068 INF: ===================Frame #39=================== 15-12-21 22:40:32.439 -05 000000074 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:32.485 -05 000000040 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2213=================== 15-12-21 22:40:32.521 -05 000000009 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:32.583 -05 000000054 INF: ===================Frame #51=================== 15-12-21 22:40:32.585 -05 000000051 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2214=================== 15-12-21 22:40:32.587 -05 000000068 INF: ===================Frame #51=================== 15-12-21 22:40:32.733 -05 000000089 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:32.734 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:32.734 -05 000000054 INF: ===================Frame #63=================== 15-12-21 22:40:32.773 -05 000000068 INF: ===================Frame #66=================== 15-12-21 22:40:32.774 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.990C:A1\r\n 15-12-21 22:40:32.776 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:32.786 -05 000000027 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2215=================== 15-12-21 22:40:32.787 -05 000000060 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:32.885 -05 000000054 INF: ===================Frame #75=================== 15-12-21 22:40:32.888 -05 000000048 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207, Registering and Extracting C044 L001 T2216=================== 15-12-21 22:40:33.036 -05 000000054 INF: ===================Frame #86=================== 15-12-21 22:40:33.118 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:33.118 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 14 of 15 seconds left=================== 15-12-21 22:40:33.463 -05 000000068 INF: ===================Frame #120=================== 15-12-21 22:40:33.575 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:33.620 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:33.620 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:33.732 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:33.797 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:33.797 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:33.835 -05 000000054 INF: ===================Frame #150=================== 15-12-21 22:40:33.952 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:33.983 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:33.983 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:33.997 -05 000000068 INF: ===================Frame #162=================== 15-12-21 22:40:34.119 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:34.120 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 13 of 15 seconds left=================== 15-12-21 22:40:34.452 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:34.466 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.986C:A1\r\n 15-12-21 22:40:34.466 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:34.522 -05 000000068 INF: ===================Frame #204=================== 15-12-21 22:40:34.568 -05 000000054 INF: ===================Frame #208=================== 15-12-21 22:40:34.943 -05 000000068 INF: ===================Frame #237=================== 15-12-21 22:40:35.094 -05 000000068 INF: ===================Frame #249=================== 15-12-21 22:40:35.120 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:35.120 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 12 of 15 seconds left=================== 15-12-21 22:40:35.134 -05 000000054 INF: ===================Frame #252=================== 15-12-21 22:40:35.244 -05 000000068 INF: ===================Frame #261=================== 15-12-21 22:40:35.255 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:35.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:35.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:35.393 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:35.395 -05 000000068 INF: ===================Frame #273=================== 15-12-21 22:40:35.403 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:35.403 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:35.464 -05 000000054 INF: ===================Frame #278=================== 15-12-21 22:40:35.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:35.546 -05 000000068 INF: ===================Frame #285=================== 15-12-21 22:40:35.589 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:35.589 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:35.701 -05 000000068 INF: ===================Frame #297=================== 15-12-21 22:40:35.723 -05 000000054 INF: ===================Frame #299=================== 15-12-21 22:40:35.851 -05 000000068 INF: ===================Frame #309=================== 15-12-21 22:40:35.873 -05 000000054 INF: ===================Frame #311=================== 15-12-21 22:40:36.002 -05 000000068 INF: ===================Frame #321=================== 15-12-21 22:40:36.024 -05 000000054 INF: ===================Frame #323=================== 15-12-21 22:40:36.095 -05 000000011 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206, Registering and Extracting C044 L001 T2207=================== 15-12-21 22:40:36.120 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:36.120 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 11 of 15 seconds left=================== 15-12-21 22:40:36.152 -05 000000068 INF: ===================Frame #333=================== 15-12-21 22:40:36.174 -05 000000054 INF: ===================Frame #335=================== 15-12-21 22:40:36.302 -05 000000068 INF: ===================Frame #345=================== 15-12-21 22:40:36.324 -05 000000054 INF: ===================Frame #346=================== 15-12-21 22:40:36.453 -05 000000068 INF: ===================Frame #357=================== 15-12-21 22:40:36.571 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:36.589 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 58.986C:A1\r\n 15-12-21 22:40:36.589 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:36.604 -05 000000068 INF: ===================Frame #369=================== 15-12-21 22:40:36.624 -05 000000054 INF: ===================Frame #370=================== 15-12-21 22:40:36.735 -05 000000066 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205, Registering and Extracting C044 L001 T2206=================== 15-12-21 22:40:36.754 -05 000000068 INF: ===================Frame #381=================== 15-12-21 22:40:36.820 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:36.821 -05 000000054 INF: ===================Frame #386=================== 15-12-21 22:40:36.903 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:36.903 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:36.904 -05 000000068 INF: ===================Frame #392=================== 15-12-21 22:40:36.919 -05 000000038 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204, Registering and Extracting C044 L001 T2205=================== 15-12-21 22:40:37.005 -05 000000054 INF: ===================Frame #400=================== 15-12-21 22:40:37.006 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:37.025 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:37.025 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:37.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:37.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 10 of 15 seconds left=================== 15-12-21 22:40:37.132 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:37.149 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:37.149 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:37.202 -05 000000054 INF: ===================Frame #416=================== 15-12-21 22:40:37.230 -05 000000077 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203, Registering and Extracting C044 L001 T2204=================== 15-12-21 22:40:37.389 -05 000000040 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202, Registering and Extracting C044 L001 T2203=================== 15-12-21 22:40:37.394 -05 000000054 INF: ===================Frame #431=================== 15-12-21 22:40:37.430 -05 000000051 INF: ===================Registering and Extracting C044 L001 T2201, Registering and Extracting C044 L001 T2202=================== 15-12-21 22:40:37.468 -05 000000068 INF: ===================Frame #437=================== 15-12-21 22:40:37.544 -05 000000054 INF: ===================Frame #443=================== 15-12-21 22:40:37.618 -05 000000068 INF: ===================Frame #449=================== 15-12-21 22:40:37.668 -05 000000027 INF: ===================Registering and Extracting C044 L001 T2201=================== 15-12-21 22:40:37.694 -05 000000054 INF: ===================Frame #455=================== 15-12-21 22:40:37.768 -05 000000068 INF: ===================Frame #461=================== 15-12-21 22:40:37.786 -05 000000048 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:40:37.844 -05 000000054 INF: ===================Frame #467=================== 15-12-21 22:40:37.875 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:37.882 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:40:37.883 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:37.898 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.028C:A1\r\n 15-12-21 22:40:37.898 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:37.918 -05 000000068 INF: ===================Frame #473=================== 15-12-21 22:40:37.978 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:37.983 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:40:38.002 -05 000000054 INF: ===================Frame #479=================== 15-12-21 22:40:38.068 -05 000000068 INF: ===================Frame #484=================== 15-12-21 22:40:38.087 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:38.093 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:40:38.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:38.124 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 9 of 15 seconds left=================== 15-12-21 22:40:38.152 -05 000000054 INF: ===================Frame #491=================== 15-12-21 22:40:38.212 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:38.217 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:40:38.302 -05 000000054 INF: ===================Frame #503=================== 15-12-21 22:40:38.303 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:38.344 -05 000000068 INF: ===================Frame #506=================== 15-12-21 22:40:38.382 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:38.399 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:38.399 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:38.452 -05 000000054 INF: ===================Frame #515=================== 15-12-21 22:40:38.503 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:38.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:38.523 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:38.544 -05 000000068 INF: ===================Frame #522=================== 15-12-21 22:40:38.604 -05 000000054 INF: ===================Frame #527=================== 15-12-21 22:40:38.626 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:38.647 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:38.647 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:38.729 -05 000000068 INF: ===================Frame #537=================== 15-12-21 22:40:38.755 -05 000000054 INF: ===================Frame #539=================== 15-12-21 22:40:38.879 -05 000000068 INF: ===================Frame #548=================== 15-12-21 22:40:38.905 -05 000000054 INF: ===================Frame #551=================== 15-12-21 22:40:39.055 -05 000000054 INF: ===================Frame #562=================== 15-12-21 22:40:39.071 -05 000000068 INF: ===================Frame #564=================== 15-12-21 22:40:39.125 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:39.125 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 8 of 15 seconds left=================== 15-12-21 22:40:39.143 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:40:39.260 -05 000000068 INF: ===================Frame #579=================== 15-12-21 22:40:39.411 -05 000000068 INF: ===================Frame #591=================== 15-12-21 22:40:39.415 -05 000000054 INF: ===================Frame #591=================== 15-12-21 22:40:39.561 -05 000000068 INF: ===================Frame #602=================== 15-12-21 22:40:39.565 -05 000000054 INF: ===================Frame #603=================== 15-12-21 22:40:39.578 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:39.646 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.988C:A1\r\n 15-12-21 22:40:39.646 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:39.715 -05 000000054 INF: ===================Frame #615=================== 15-12-21 22:40:39.761 -05 000000068 INF: ===================Frame #618=================== 15-12-21 22:40:39.866 -05 000000054 INF: ===================Frame #627=================== 15-12-21 22:40:39.878 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:39.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:39.897 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:39.931 -05 000000068 INF: ===================Frame #632=================== 15-12-21 22:40:40.004 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:40.016 -05 000000054 INF: ===================Frame #638=================== 15-12-21 22:40:40.083 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:40.083 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:40.098 -05 000000068 INF: ===================Frame #645=================== 15-12-21 22:40:40.125 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:40.125 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 7 of 15 seconds left=================== 15-12-21 22:40:40.185 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:40.207 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:40.207 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:40.248 -05 000000068 INF: ===================Frame #657=================== 15-12-21 22:40:40.267 -05 000000054 INF: ===================Frame #658=================== 15-12-21 22:40:40.398 -05 000000068 INF: ===================Frame #669=================== 15-12-21 22:40:40.442 -05 000000054 INF: ===================Frame #672=================== 15-12-21 22:40:40.548 -05 000000068 INF: ===================Frame #680=================== 15-12-21 22:40:40.620 -05 000000054 INF: ===================Frame #686=================== 15-12-21 22:40:40.758 -05 000000068 INF: ===================Frame #697=================== 15-12-21 22:40:40.788 -05 000000054 INF: ===================Frame #699=================== 15-12-21 22:40:40.908 -05 000000068 INF: ===================Frame #709=================== 15-12-21 22:40:40.938 -05 000000054 INF: ===================Frame #711=================== 15-12-21 22:40:41.058 -05 000000068 INF: ===================Frame #721=================== 15-12-21 22:40:41.089 -05 000000054 INF: ===================Frame #723=================== 15-12-21 22:40:41.126 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:41.127 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 6 of 15 seconds left=================== 15-12-21 22:40:41.208 -05 000000068 INF: ===================Frame #733=================== 15-12-21 22:40:41.239 -05 000000054 INF: ===================Frame #735=================== 15-12-21 22:40:41.358 -05 000000068 INF: ===================Frame #745=================== 15-12-21 22:40:41.389 -05 000000054 INF: ===================Frame #747=================== 15-12-21 22:40:41.437 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:41.456 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:41.456 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:41.508 -05 000000068 INF: ===================Frame #756=================== 15-12-21 22:40:41.539 -05 000000054 INF: ===================Frame #759=================== 15-12-21 22:40:41.565 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:41.580 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:41.580 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:41.684 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:41.690 -05 000000054 INF: ===================Frame #771=================== 15-12-21 22:40:41.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:41.704 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:41.765 -05 000000068 INF: ===================Frame #777=================== 15-12-21 22:40:41.810 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:41.831 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 53.959C:A1\r\n 15-12-21 22:40:41.831 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:41.840 -05 000000054 INF: ===================Frame #783=================== 15-12-21 22:40:41.915 -05 000000068 INF: ===================Frame #789=================== 15-12-21 22:40:41.990 -05 000000054 INF: ===================Frame #794=================== 15-12-21 22:40:42.065 -05 000000068 INF: ===================Frame #800=================== 15-12-21 22:40:42.127 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:42.127 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 5 of 15 seconds left=================== 15-12-21 22:40:42.334 -05 000000068 INF: ===================Frame #822=================== 15-12-21 22:40:42.365 -05 000000054 INF: ===================Frame #824=================== 15-12-21 22:40:42.514 -05 000000068 INF: ===================Frame #836=================== 15-12-21 22:40:42.564 -05 000000054 INF: ===================Frame #840=================== 15-12-21 22:40:42.686 -05 000000068 INF: ===================Frame #850=================== 15-12-21 22:40:42.738 -05 000000054 INF: ===================Frame #854=================== 15-12-21 22:40:42.853 -05 000000068 INF: ===================Frame #863=================== 15-12-21 22:40:42.906 -05 000000054 INF: ===================Frame #867=================== 15-12-21 22:40:42.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:42.954 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:42.954 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:43.005 -05 000000068 INF: ===================Frame #875=================== 15-12-21 22:40:43.056 -05 000000054 INF: ===================Frame #879=================== 15-12-21 22:40:43.056 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:43.079 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.048C:A1\r\n 15-12-21 22:40:43.079 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:43.128 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:43.128 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 4 of 15 seconds left=================== 15-12-21 22:40:43.155 -05 000000068 INF: ===================Frame #887=================== 15-12-21 22:40:43.191 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:43.206 -05 000000054 INF: ===================Frame #891=================== 15-12-21 22:40:43.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:43.264 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:43.305 -05 000000068 INF: ===================Frame #898=================== 15-12-21 22:40:43.356 -05 000000054 INF: ===================Frame #902=================== 15-12-21 22:40:43.371 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:43.391 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:43.391 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:43.535 -05 000000068 INF: ===================Frame #917=================== 15-12-21 22:40:43.584 -05 000000054 INF: ===================Frame #920=================== 15-12-21 22:40:43.685 -05 000000068 INF: ===================Frame #929=================== 15-12-21 22:40:43.752 -05 000000054 INF: ===================Frame #934=================== 15-12-21 22:40:43.835 -05 000000068 INF: ===================Frame #940=================== 15-12-21 22:40:43.918 -05 000000054 INF: ===================Frame #947=================== 15-12-21 22:40:44.030 -05 000000068 INF: ===================Frame #956=================== 15-12-21 22:40:44.068 -05 000000054 INF: ===================Frame #959=================== 15-12-21 22:40:44.129 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:44.129 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 3 of 15 seconds left=================== 15-12-21 22:40:44.201 -05 000000068 INF: ===================Frame #969=================== 15-12-21 22:40:44.218 -05 000000054 INF: ===================Frame #971=================== 15-12-21 22:40:44.351 -05 000000068 INF: ===================Frame #981=================== 15-12-21 22:40:44.368 -05 000000054 INF: ===================Frame #982=================== 15-12-21 22:40:44.501 -05 000000068 INF: ===================Frame #993=================== 15-12-21 22:40:44.585 -05 000000054 INF: ===================Frame #1000=================== 15-12-21 22:40:44.616 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:44.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:44.639 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:44.651 -05 000000068 INF: ===================Frame #1005=================== 15-12-21 22:40:44.744 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:44.762 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:44.762 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:44.763 -05 000000054 INF: ===================Frame #1014=================== 15-12-21 22:40:44.801 -05 000000068 INF: ===================Frame #1017=================== 15-12-21 22:40:44.864 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:44.888 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.980C:A1\r\n 15-12-21 22:40:44.888 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:44.931 -05 000000054 INF: ===================Frame #1027=================== 15-12-21 22:40:44.951 -05 000000068 INF: ===================Frame #1029=================== 15-12-21 22:40:44.995 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:45.015 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:45.015 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:45.081 -05 000000054 INF: ===================Frame #1039=================== 15-12-21 22:40:45.101 -05 000000068 INF: ===================Frame #1040=================== 15-12-21 22:40:45.130 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:45.130 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 2 of 15 seconds left=================== 15-12-21 22:40:45.231 -05 000000054 INF: ===================Frame #1051=================== 15-12-21 22:40:45.355 -05 000000068 INF: ===================Frame #1061=================== 15-12-21 22:40:45.381 -05 000000054 INF: ===================Frame #1063=================== 15-12-21 22:40:45.505 -05 000000068 INF: ===================Frame #1072=================== 15-12-21 22:40:45.531 -05 000000054 INF: ===================Frame #1074=================== 15-12-21 22:40:45.707 -05 000000068 INF: ===================Frame #1088=================== 15-12-21 22:40:45.773 -05 000000054 INF: ===================Frame #1094=================== 15-12-21 22:40:45.875 -05 000000068 INF: ===================Frame #1102=================== 15-12-21 22:40:45.948 -05 000000054 INF: ===================Frame #1107=================== 15-12-21 22:40:46.043 -05 000000068 INF: ===================Frame #1115=================== 15-12-21 22:40:46.098 -05 000000054 INF: ===================Frame #1119=================== 15-12-21 22:40:46.131 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:46.131 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°, Delay 1 of 15 seconds left=================== 15-12-21 22:40:46.193 -05 000000068 INF: ===================Frame #1127=================== 15-12-21 22:40:46.237 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:46.248 -05 000000054 INF: ===================Frame #1131=================== 15-12-21 22:40:46.260 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:46.260 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:46.343 -05 000000068 INF: ===================Frame #1139=================== 15-12-21 22:40:46.363 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:46.386 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:46.386 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:46.398 -05 000000054 INF: ===================Frame #1143=================== 15-12-21 22:40:46.492 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:46.493 -05 000000068 INF: ===================Frame #1150=================== 15-12-21 22:40:46.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:46.511 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:46.548 -05 000000054 INF: ===================Frame #1155=================== 15-12-21 22:40:46.698 -05 000000054 INF: ===================Frame #1167=================== 15-12-21 22:40:46.699 -05 000000068 INF: ===================Frame #1167=================== 15-12-21 22:40:46.848 -05 000000054 INF: ===================Frame #1179=================== 15-12-21 22:40:46.849 -05 000000068 INF: ===================Frame #1179=================== 15-12-21 22:40:46.934 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:46.999 -05 000000068 INF: ===================Frame #1190=================== 15-12-21 22:40:46.999 -05 000000054 INF: ===================Frame #1190=================== 15-12-21 22:40:47.008 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 49.562C:A1\r\n 15-12-21 22:40:47.008 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:47.113 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:47.114 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:47.114 -05 000000062 INF: WaitCommand(15000) end 15-12-21 22:40:47.114 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Flowcell Temp 20°=================== 15-12-21 22:40:47.115 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:47.116 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:47.117 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:40:47.118 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:47.195 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:47.195 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Selecting Reagent USM (3)=================== 15-12-21 22:40:47.195 -05 000000062 INF: Valve B2: Go to position 3 15-12-21 22:40:47.195 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:40:47.252 -05 000000068 INF: ===================Frame #1211=================== 15-12-21 22:40:47.257 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 5\r 15-12-21 22:40:47.257 -05 000000062 INF: Valve B2: 50.605 seconds since last move, > 5.000 seconds required between moves 15-12-21 22:40:47.257 -05 000000062 INF: Valve B2: Taking shortest path 'CC' from 5 to 3 15-12-21 22:40:47.257 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CC3\r 15-12-21 22:40:47.258 -05 000000062 INF: SerialPort B2 (VICIB2): Recv (discarded) 15-12-21 22:40:47.258 -05 000000062 INF: SerialPort B2 (VICIB2): Xmit CP\r 15-12-21 22:40:47.333 -05 000000054 INF: ===================Frame #1217=================== 15-12-21 22:40:47.402 -05 000000068 INF: ===================Frame #1222=================== 15-12-21 22:40:47.483 -05 000000054 INF: ===================Frame #1229=================== 15-12-21 22:40:47.596 -05 000000068 INF: ===================Frame #1238=================== 15-12-21 22:40:47.633 -05 000000054 INF: ===================Frame #1241=================== 15-12-21 22:40:47.739 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:47.757 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:47.757 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:47.764 -05 000000068 INF: ===================Frame #1250=================== 15-12-21 22:40:47.776 -05 000000068 INF: Camera complete - got 1250 frames. 15-12-21 22:40:47.778 -05 000000068 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:40:47.818 -05 000000078 INF: FPGA: Recv TDIYWAIT 15-12-21 22:40:47.818 -05 000000082 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:47.823 -05 000000082 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:40:47.826 -05 000000088 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:40:47.827 -05 000000088 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:40:47.827 -05 000000088 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:40:47.827 -05 000000088 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:40:47.827 -05 000000090 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:40:47.827 -05 000000088 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:40:47.827 -05 000000090 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:40:47.827 -05 000000090 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:40:47.827 -05 000000090 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:40:47.834 -05 000000090 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:40:47.874 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:47.882 -05 000000062 INF: SerialPort B2 (VICIB2): Recv Position is = 3\r 15-12-21 22:40:47.882 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:47.882 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Opening shutoff valve=================== 15-12-21 22:40:47.945 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:47.945 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:48.004 -05 000000022 INF: FPGA: Recv EX1MV 15-12-21 22:40:48.004 -05 000000088 INF: Excitation Filter 1: Moved 36 steps in 177.3044 ms 15-12-21 22:40:48.004 -05 000000088 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 177.3996 ms 15-12-21 22:40:48.004 -05 000000088 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 177.4912 ms 15-12-21 22:40:48.005 -05 000000088 INF: ====================================== 15-12-21 22:40:48.051 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:48.073 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:40:48.073 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:48.130 -05 000000054 INF: ===================Frame #1250=================== 15-12-21 22:40:48.130 -05 000000068 INF: ===================Camera TDI=================== 15-12-21 22:40:48.167 -05 000000068 INF: ====================================== 15-12-21 22:40:48.178 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:48.193 -05 000000022 INF: FPGA: Recv EX2MV 15-12-21 22:40:48.193 -05 000000090 INF: Excitation Filter 2: Moved 107 steps in 366.0226 ms 15-12-21 22:40:48.193 -05 000000090 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 366.1346 ms 15-12-21 22:40:48.193 -05 000000090 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 366.3573 ms 15-12-21 22:40:48.194 -05 000000090 INF: ====================================== 15-12-21 22:40:48.198 -05 000000082 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:48.204 -05 000000082 INF: ====================================== 15-12-21 22:40:48.262 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:48.262 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:48.327 -05 000000054 INF: Camera complete - got 1250 frames. 15-12-21 22:40:48.331 -05 000000054 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:40:48.381 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:1\r 15-12-21 22:40:48.385 -05 000000049 INF: Y Motor: Moved to 9.0764 after 16693 ms 15-12-21 22:40:48.386 -05 000000049 INF: ====================================== 15-12-21 22:40:48.472 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:40:48.472 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:48.946 -05 000000054 INF: ===================Camera TDI=================== 15-12-21 22:40:48.964 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:48.969 -05 000000054 INF: ====================================== 15-12-21 22:40:48.970 -05 000000058 INF: ===================Camera TDI=================== 15-12-21 22:40:48.981 -05 000000058 INF: ====================================== 15-12-21 22:40:48.984 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:48.989 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:48.993 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:48.994 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:40:49.034 -05 000000047 INF: FPGA: Recv TDICLINES 10648 15-12-21 22:40:49.034 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:40:49.036 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.065C:A1\r\n 15-12-21 22:40:49.036 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:49.120 -05 000000058 INF: FPGA: Recv TDIYERD 907662 15-12-21 22:40:49.120 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:40:49.189 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:49.190 -05 000000055 INF: FPGA: Recv ZADCR 23345 15-12-21 22:40:49.190 -05 000000057 INF: At scan end Y pos = 9.077 and Z pos = -0.089. Y moved -60.303 mm 15-12-21 22:40:49.190 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:40:49.254 -05 000000090 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:40:49.254 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:40:49.254 -05 000000057 INF: TDIScan finished after 22735.1666 ms 15-12-21 22:40:49.254 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:40:49.254 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:40:49.256 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:40:49.256 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:49.258 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.285 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 1.062 um 15-12-21 22:40:49.286 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.288 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.290 -05 000000068 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:40:49.290 -05 000000033 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:40:49.290 -05 000000068 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:40:49.290 -05 000000058 INF: ===================Dither Clean Up Command=================== 15-12-21 22:40:49.292 -05 000000047 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:40:49.292 -05 000000047 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:40:49.292 -05 000000095 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:40:49.292 -05 000000047 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:40:49.292 -05 000000088 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:49.293 -05 000000088 INF: ===================LFT:Extracting coords=================== 15-12-21 22:40:49.302 -05 000000095 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:40:49.315 -05 000000034 INF: FPGA: Recv ZSTEP 15-12-21 22:40:49.315 -05 000000034 INF: FPGA: Recv ZSEL 15-12-21 22:40:49.315 -05 000000095 INF: FPGA: Xmit ZDACW 28369\n 15-12-21 22:40:49.316 -05 000000068 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:40:49.316 -05 000000047 INF: ====================================== 15-12-21 22:40:49.317 -05 000000068 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:40:49.317 -05 000000033 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:40:49.317 -05 000000068 INF: ====================================== 15-12-21 22:40:49.338 -05 000000088 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:49.340 -05 000000088 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:40:49.341 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:49.347 -05 000000063 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:49.347 -05 000000087 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:49.347 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:49.347 -05 000000087 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:49.348 -05 000000022 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:49.348 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:49.348 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:40:49.406 -05 000000028 INF: FPGA: Recv ZDACW 15-12-21 22:40:49.407 -05 000000033 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:40:49.407 -05 000000095 INF: ====================================== 15-12-21 22:40:49.408 -05 000000033 INF: ====================================== 15-12-21 22:40:49.408 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:49.408 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:40:49.408 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:49.456 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:49.466 -05 000000062 INF: KloehnPump B (KLOEHNB): Pumping from 3, aspirate port PortB, aspiration rate 750, dispense rate 2500, volume 75, calling command "Pumping to Flowcell #2 pump index #0", State=Running, Depth=2, Children=0, Thread="Run", Parent="Incorporation", Type=SameThreadBlocking, solution delay 2000 15-12-21 22:40:49.535 -05 000000087 INF: LFT found best fwhm score 2.917778 in 129 ms 15-12-21 22:40:49.535 -05 000000087 INF: LFT found good score at index 2733 with fwhm value 2.917778. Next cycle, cycle 45 starting Z position for bottom surface is at -0.092 mm FC:A, C:44,L:2,B 15-12-21 22:40:49.536 -05 000000087 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:49.536 -05 000000087 INF: ====================================== 15-12-21 22:40:49.537 -05 000000078 INF: LFT found best fwhm score 2.760876 in 130 ms 15-12-21 22:40:49.537 -05 000000078 INF: LFT found good score at index 8869 with fwhm value 2.760876. Next cycle, cycle 45 starting Z position for bottom surface is at -0.091 mm FC:A, C:44,L:2,B 15-12-21 22:40:49.537 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:49.537 -05 000000078 INF: ====================================== 15-12-21 22:40:49.546 -05 000000063 INF: LFT found best fwhm score 2.788537 in 140 ms 15-12-21 22:40:49.546 -05 000000063 INF: LFT found good score at index 889 with fwhm value 2.788537. Next cycle, cycle 45 starting Z position for bottom surface is at -0.093 mm FC:A, C:44,L:2,B 15-12-21 22:40:49.546 -05 000000063 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:49.547 -05 000000063 INF: ====================================== 15-12-21 22:40:49.551 -05 000000022 INF: LFT found best fwhm score 2.741238 in 145 ms 15-12-21 22:40:49.551 -05 000000022 INF: LFT found good score at index 3229 with fwhm value 2.741238. Next cycle, cycle 45 starting Z position for bottom surface is at -0.092 mm FC:A, C:44,L:2,B 15-12-21 22:40:49.552 -05 000000022 INF: ===================LookupFocusTracking=================== 15-12-21 22:40:49.552 -05 000000022 INF: ====================================== 15-12-21 22:40:49.556 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:40:49.559 -05 000000088 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:40:49.562 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:49.563 -05 000000088 INF: LFT weighted average best Z for bottom surface is at -0.092mm FC:A, C:44,L:2,B 15-12-21 22:40:49.566 -05 000000088 INF: ====================================== 15-12-21 22:40:49.569 -05 000000058 INF: ====================================== 15-12-21 22:40:49.574 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.577 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:40:49.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:40:49.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:40:49.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:40:49.578 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.579 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:40:49.579 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:40:49.580 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:40:49.580 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 1 - X = 17.167 Y = 39.38=================== 15-12-21 22:40:49.580 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Waiting for image analysis=================== 15-12-21 22:40:49.580 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:40:49.582 -05 000000057 INF: Waited 2 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 2, buffer wait time 0 15-12-21 22:40:49.584 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:40:49.585 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:49.585 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:49.585 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:40:49.585 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:40:49.585 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:40:49.585 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:40:49.588 -05 000000048 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104=================== 15-12-21 22:40:49.588 -05 000000051 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105=================== 15-12-21 22:40:49.588 -05 000000077 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105=================== 15-12-21 22:40:49.588 -05 000000040 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104=================== 15-12-21 22:40:49.588 -05 000000038 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106=================== 15-12-21 22:40:49.594 -05 000000027 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104=================== 15-12-21 22:40:49.595 -05 000000066 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2107, Registering and Extracting C044 L002 T2108=================== 15-12-21 22:40:49.595 -05 000000011 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2107, Registering and Extracting C044 L002 T2108=================== 15-12-21 22:40:49.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Populating image tags=================== 15-12-21 22:40:49.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:49.603 -05 000000057 INF: TDIScan start: HighRes1x1, velocity = 3.75 mm/sec, clearing lines = 259, image lines = 160000, channels = A, G, T, C, TDI Z = -108.2 um, section = B_1 15-12-21 22:40:49.623 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:49.624 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:49.628 -05 000000079 INF: ===================MoveEmissionFilters=================== 15-12-21 22:40:49.628 -05 000000037 INF: ===================Move X,Y=================== 15-12-21 22:40:49.628 -05 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:49.632 -05 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, Move Z Motor=================== 15-12-21 22:40:49.632 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:40:49.632 -05 000000034 INF: Z Motor: Entering MoveAbsStepped 15-12-21 22:40:49.632 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:40:49.632 -05 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:40:49.636 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:40:49.638 -05 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:49.638 -05 000000037 INF: ===================Move X,Y, Parallel=================== 15-12-21 22:40:49.639 -05 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:40:49.639 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:40:49.639 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2', MoveEmissionFilterSet=================== 15-12-21 22:40:49.639 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1', MoveEmissionFilterSet=================== 15-12-21 22:40:49.645 -05 000000081 INF: ===================Move Emission Filter 21(sim) to IntoPath=================== 15-12-21 22:40:49.645 -05 000000082 INF: ===================Move X Motor without settling=================== 15-12-21 22:40:49.648 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`23040 (0x03)\r\n(0xFF) 15-12-21 22:40:49.648 -05 000000062 INF: Current Position of Pump is: 23040 15-12-21 22:40:49.649 -05 000000082 INF: X Motor: Xmit PR VM\n 15-12-21 22:40:49.649 -05 000000081 INF: ====================================== 15-12-21 22:40:49.649 -05 000000055 INF: ===================Move Y Motor without settling=================== 15-12-21 22:40:49.649 -05 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA, TDI Scan Setup and Camera Arm=================== 15-12-21 22:40:49.649 -05 000000022 INF: ===================Move Emission Filter 22(sim) to OutOfPath=================== 15-12-21 22:40:49.649 -05 000000068 INF: ===================Move Emission Filter 11(sim) to OutOfPath=================== 15-12-21 22:40:49.649 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3), Aspirating port PortB=================== 15-12-21 22:40:49.649 -05 000000055 INF: Y Motor: Moving to 70.6885 mm @24.993 mm/sec, started at 9.0764 mm 15-12-21 22:40:49.649 -05 000000054 INF: ===================Move Emission Filter 12 to IntoPath=================== 15-12-21 22:40:49.649 -05 000000029 INF: ===================Move Emission Filter 31(sim) to OutOfPath=================== 15-12-21 22:40:49.649 -05 000000024 INF: ===================Move Emission Filter 42(sim) to OutOfPath=================== 15-12-21 22:40:49.649 -05 000000087 INF: ===================Move Emission Filter 41(sim) to IntoPath=================== 15-12-21 22:40:49.649 -05 000000036 INF: ===================Move Emission Filter 32(sim) to IntoPath=================== 15-12-21 22:40:49.650 -05 000000024 INF: ====================================== 15-12-21 22:40:49.650 -05 000000087 INF: ====================================== 15-12-21 22:40:49.650 -05 000000022 INF: ====================================== 15-12-21 22:40:49.657 -05 000000036 INF: ====================================== 15-12-21 22:40:49.657 -05 000000095 INF: ===================Move EmissionFilterSet2(sim) ('G') to 'Bandpass1'=================== 15-12-21 22:40:49.658 -05 000000055 INF: Y Motor: Xmit 1D6568846\n 15-12-21 22:40:49.658 -05 000000029 INF: ====================================== 15-12-21 22:40:49.662 -05 000000055 INF: Y Motor: Xmit 1G\n 15-12-21 22:40:49.662 -05 000000056 INF: ===================Move EmissionFilterSet4(sim) ('C') to 'Bandpass1'=================== 15-12-21 22:40:49.662 -05 000000054 INF: Emission Filter 12: Remaining IntoPath 15-12-21 22:40:49.662 -05 000000088 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:49.662 -05 000000047 INF: ===================Camera Arm TDI=================== 15-12-21 22:40:49.662 -05 000000068 INF: ====================================== 15-12-21 22:40:49.669 -05 000000054 INF: ====================================== 15-12-21 22:40:49.670 -05 000000088 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:49.670 -05 000000095 INF: ====================================== 15-12-21 22:40:49.670 -05 000000056 INF: ====================================== 15-12-21 22:40:49.670 -05 000000049 INF: ===================Move EmissionFilterSet3(sim) ('T') to 'Bandpass2'=================== 15-12-21 22:40:49.675 -05 000000088 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:40:49.680 -05 000000063 INF: ===================Move EmissionFilterSet1(sim) ('A') to 'Bandpass2'=================== 15-12-21 22:40:49.680 -05 000000088 INF: ===================Initializing FPGA for ITF Focus=================== 15-12-21 22:40:49.680 -05 000000088 INF: FPGA: Xmit ZSEL 3\n 15-12-21 22:40:49.686 -05 000000049 INF: ====================================== 15-12-21 22:40:49.689 -05 000000063 INF: ====================================== 15-12-21 22:40:49.700 -05 000000079 INF: ====================================== 15-12-21 22:40:49.708 -05 000000036 INF: FPGA: Recv ZSEL 15-12-21 22:40:49.712 -05 000000055 INF: Y Motor: Recv 1D6568846\r\n 15-12-21 22:40:49.712 -05 000000088 INF: ===================TDI Scan Setup, Serial, ITFSwathPreFocus=================== 15-12-21 22:40:49.712 -05 000000088 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:49.713 -05 000000055 INF: Y Motor: Recv 1G\r\n 15-12-21 22:40:49.715 -05 000000082 INF: X Motor: Recv PR VM\r\n6144\r\n> 15-12-21 22:40:49.715 -05 000000082 INF: X Motor: Xmit PR VI\n 15-12-21 22:40:49.715 -05 000000055 INF: Y Motor: Xmit 1D\n 15-12-21 22:40:49.725 -05 000000088 INF: ===================TDI Scan Setup, Serial, SetVelocity Z Motor=================== 15-12-21 22:40:49.726 -05 000000088 INF: Z Motor: Set Z velocity to 0.263 mm/s / 338868 16.16 format 15-12-21 22:40:49.726 -05 000000088 INF: FPGA: Xmit ZSTEP 338868\n 15-12-21 22:40:49.747 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:49.748 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V2400s231P14400R\r 15-12-21 22:40:49.767 -05 000000049 INF: FPGA: Recv ZSTEP 15-12-21 22:40:49.768 -05 000000088 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:49.769 -05 000000082 INF: X Motor: Recv PR VI\r\n410\r\n> 15-12-21 22:40:49.769 -05 000000082 INF: X Motor: Before MoveAbsStepped, VM = 6144 (15 mm/sec), VI = 410 (1.0009765625 mm/sec), 'Velocity' property = 15 mm/sec 15-12-21 22:40:49.769 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:49.769 -05 000000082 INF: X Motor: Moving to 17.9390 mm @15.000 mm/sec, started at 17.1665 mm 15-12-21 22:40:49.769 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:49.769 -05 000000082 INF: X Motor: Xmit MA -16819\n 15-12-21 22:40:49.770 -05 000000055 INF: Y Motor: Recv 1D\r\n 15-12-21 22:40:49.771 -05 000000055 INF: Y Motor: Recv *6568846\r\n 15-12-21 22:40:49.772 -05 000000088 INF: ===================TDI Scan Setup, Serial, Delay Next Z Move Until Y=================== 15-12-21 22:40:49.773 -05 000000088 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:49.774 -05 000000055 INF: Y Motor: WaitUntilStopped 62465 15-12-21 22:40:49.777 -05 000000088 INF: ===================TDI Scan Setup, Serial, Arm Z Motor=================== 15-12-21 22:40:49.777 -05 000000088 INF: Z Motor: Entering ArmAbsStepped 15-12-21 22:40:49.777 -05 000000088 INF: Z Motor: Arming to move to -0.0682 mm 15-12-21 22:40:49.777 -05 000000088 INF: FPGA: Xmit ZYT 7052534 4\n 15-12-21 22:40:49.845 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:49.846 -05 000000068 INF: FPGA: Recv ZYT 15-12-21 22:40:49.846 -05 000000088 INF: Z Motor: ZARM will arm Z motor and start the ramp when Y (currently 907641 enc / 9.076 mm / ) = 7052534 enc / 70.525 mm 15-12-21 22:40:49.846 -05 000000088 INF: FPGA: Xmit ZARM 17884\n 15-12-21 22:40:49.847 -05 000000082 INF: X Motor: Recv MA -16819\r\n> 15-12-21 22:40:49.866 -05 000000082 INF: X Motor: WaitUntilStopped 60051 15-12-21 22:40:49.925 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:49.946 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:49.948 -05 000000081 INF: FPGA: Recv ZARM 15-12-21 22:40:49.948 -05 000000088 INF: Z Motor: ArmAndSetTriggerMode 'ZARM' command took 101.9215 ms 15-12-21 22:40:49.948 -05 000000088 INF: Z Motor: ArmAbsStepped took 171.1372 ms 15-12-21 22:40:49.950 -05 000000088 INF: ===================TDI Scan Setup, Serial=================== 15-12-21 22:40:49.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:49.951 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:49.955 -05 000000088 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:49.958 -05 000000088 INF: ===================TDI Scan Setup, FPGA Set Image Mode=================== 15-12-21 22:40:49.959 -05 000000088 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:49.962 -05 000000088 INF: ===================TDI Scan Setup, Set FPGA Camera Trigger=================== 15-12-21 22:40:49.962 -05 000000088 INF: ===================TDI Scan Setup=================== 15-12-21 22:40:49.987 -05 000000088 INF: ====================================== 15-12-21 22:40:50.006 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:50.077 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:50.145 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.990C:A1\r\n 15-12-21 22:40:50.145 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:50.315 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:50.390 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:50.392 -05 000000082 INF: X Motor: Xmit PR ER\n 15-12-21 22:40:50.441 -05 000000082 INF: X Motor: Recv PR ER\r\n0\r\n> 15-12-21 22:40:50.441 -05 000000082 INF: X Motor: Moved to 17.9380 after 575 ms 15-12-21 22:40:50.442 -05 000000082 INF: ====================================== 15-12-21 22:40:50.640 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:50.689 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:50.939 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:51.019 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:51.277 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:51.279 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:51.327 -05 000000047 INF: Camera AttachBuffer (imageDataPtr = 13092589616 imgPtr = 13746901040 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:40:51.327 -05 000000047 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:40:51.327 -05 000000047 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 2048, VertSize = 128) 15-12-21 22:40:51.328 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:51.329 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:51.329 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:51.460 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:51.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:51.516 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:51.592 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:51.654 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:51.656 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:51.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:51.721 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:51.906 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:51.990 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:52.115 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:52.199 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 45.456C:A1\r\n 15-12-21 22:40:52.199 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:52.240 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:52.325 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:52.580 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:52.655 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:52.859 -05 000000047 INF: Camera AttachBuffer (imageDataPtr = 14434766896 imgPtr = 15089078320 , attachBufferNumFrames = 1250 , frameSize = 524288, 15-12-21 22:40:52.859 -05 000000047 INF: CameraArmTDI (TDI_1x1, NumClearing = 0 + ImageLines 160000 = 160000 TotalLines, 15-12-21 22:40:52.859 -05 000000047 INF: CameraArmTDI ... SensorModeLineBundleHeight = 128, SubArrayMode = Off, HorPos = 0, VertPos = 0, HorSize = 4096, VertSize = 128) 15-12-21 22:40:52.860 -05 000000047 INF: ====================================== 15-12-21 22:40:52.862 -05 000000034 INF: ===================MoveZMotorToStartPositionAndArmCameraAndFPGA=================== 15-12-21 22:40:52.872 -05 000000034 INF: ====================================== 15-12-21 22:40:52.905 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:52.969 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:53.008 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:53.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:53.030 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:53.133 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:53.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:53.156 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:53.219 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:53.259 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:53.278 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:53.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:53.279 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:53.342 -05 000000055 INF: Y Motor: Moved to 70.6886 after 3568 ms 15-12-21 22:40:53.343 -05 000000055 INF: ====================================== 15-12-21 22:40:53.346 -05 000000037 INF: ===================Move X,Y=================== 15-12-21 22:40:53.351 -05 000000037 INF: ====================================== 15-12-21 22:40:53.356 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Moving motors=================== 15-12-21 22:40:53.361 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:53.361 -05 000000057 INF: Y Motor: Xmit 1V0.28800\n 15-12-21 22:40:53.405 -05 000000057 INF: Y Motor: Recv 1V0.28800\r\n 15-12-21 22:40:53.406 -05 000000057 INF: FPGA: Xmit ZFREQCL 4000\n 15-12-21 22:40:53.465 -05 000000047 INF: FPGA: Recv ZFREQCL 15-12-21 22:40:53.466 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Reporting Motor Positions=================== 15-12-21 22:40:53.466 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:53.466 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:40:53.527 -05 000000029 INF: FPGA: Recv TDIYERD 7068853 15-12-21 22:40:53.527 -05 000000057 INF: Before scan, Y encoder from FPGA = 7068853 counts (70.689 mm) 15-12-21 22:40:53.528 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:53.529 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:53.530 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:53.534 -05 000000049 INF: ===================Set YMotor gains for scans=================== 15-12-21 22:40:53.534 -05 000000037 INF: ===================TDI FPGA Arm=================== 15-12-21 22:40:53.535 -05 000000049 INF: Y Motor: Xmit 1W(GP,6)\n 15-12-21 22:40:53.541 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:53.543 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA, Set Y starting position for the TDIYARM2 command=================== 15-12-21 22:40:53.543 -05 000000037 INF: FPGA: Xmit TDIYPOS 6938000\n 15-12-21 22:40:53.590 -05 000000081 INF: FPGA: Recv TDIYPOS 15-12-21 22:40:53.591 -05 000000049 INF: Y Motor: Recv 1W(GP,6)\r\n 15-12-21 22:40:53.591 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:53.591 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:53.592 -05 000000049 INF: Y Motor: Gains are set for Scanning: GP=6.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:40:53.592 -05 000000049 INF: ====================================== 15-12-21 22:40:53.600 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA, FPGA Arm TDI=================== 15-12-21 22:40:53.601 -05 000000037 INF: FPGA: Xmit TDIYARM3 160000 7052534 1\n 15-12-21 22:40:53.663 -05 000000054 INF: FPGA: Recv TDIYARM3 15-12-21 22:40:53.665 -05 000000037 INF: ===================TDI FPGA Arm, Arm FPGA=================== 15-12-21 22:40:53.675 -05 000000037 INF: ===================TDI FPGA Arm=================== 15-12-21 22:40:53.676 -05 000000037 INF: ====================================== 15-12-21 22:40:53.678 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Arm Scan and Set YMotor Gain=================== 15-12-21 22:40:53.680 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:40:53.682 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:53.683 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:53.684 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:53.686 -05 000000033 INF: ===================Move Excitation Filter 2 (A) to 'OD0.2'=================== 15-12-21 22:40:53.686 -05 000000090 INF: ===================Move Excitation Filter 1 (G) to 'OD0.6'=================== 15-12-21 22:40:53.686 -05 000000033 INF: Excitation Filter 2: Moving 'A' to index 5 (OD0.2) 15-12-21 22:40:53.686 -05 000000033 INF: Excitation Filter 2: Moving to 225.0000 degrees 15-12-21 22:40:53.686 -05 000000033 INF: Excitation Filter 2: Moving -107 steps 15-12-21 22:40:53.686 -05 000000033 INF: FPGA: Xmit EX2MV -107\n 15-12-21 22:40:53.687 -05 000000090 INF: Excitation Filter 1: Moving 'G' to index 7 (OD0.6) 15-12-21 22:40:53.687 -05 000000090 INF: Excitation Filter 1: Moving to 315.0000 degrees 15-12-21 22:40:53.687 -05 000000090 INF: Excitation Filter 1: Moving -36 steps 15-12-21 22:40:53.692 -05 000000090 INF: FPGA: Xmit EX1MV -36\n 15-12-21 22:40:53.849 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:53.851 -05 000000063 INF: FPGA: Recv EX1MV 15-12-21 22:40:53.851 -05 000000090 INF: Excitation Filter 1: Moved -36 steps in 164.2559 ms 15-12-21 22:40:53.852 -05 000000090 INF: Excitation Filter 1: Moved to 314.4849 degrees (target was 315.0000) in 164.6 ms 15-12-21 22:40:53.852 -05 000000090 INF: Excitation Filter 1: Moved 'G' to index 7 (OD0.6) in 165.2095 ms 15-12-21 22:40:53.853 -05 000000090 INF: ====================================== 15-12-21 22:40:53.916 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:54.089 -05 000000081 INF: FPGA: Recv EX2MV 15-12-21 22:40:54.089 -05 000000033 INF: Excitation Filter 2: Moved -107 steps in 402.9702 ms 15-12-21 22:40:54.089 -05 000000033 INF: Excitation Filter 2: Moved to 224.7190 degrees (target was 225.0000) in 403.19 ms 15-12-21 22:40:54.090 -05 000000033 INF: Excitation Filter 2: Moved 'A' to index 5 (OD0.2) in 403.3216 ms 15-12-21 22:40:54.091 -05 000000033 INF: ====================================== 15-12-21 22:40:54.105 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:54.109 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:40:54.115 -05 000000082 INF: ===================Move Y Motor without settling=================== 15-12-21 22:40:54.115 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:40:54.119 -05 000000078 INF: ===================FPGA Z Wait=================== 15-12-21 22:40:54.119 -05 000000082 INF: Y Motor: Moving to 9.0766 mm @3.745 mm/sec, started at 70.6886 mm 15-12-21 22:40:54.119 -05 000000047 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:40:54.119 -05 000000078 INF: FPGA: Xmit ZWAIT\n 15-12-21 22:40:54.120 -05 000000082 INF: Y Motor: Xmit 1D407662\n 15-12-21 22:40:54.123 -05 000000082 INF: Y Motor: Xmit 1G\n 15-12-21 22:40:54.141 -05 000000028 INF: ===================Camera TDI, Parallel=================== 15-12-21 22:40:54.141 -05 000000047 INF: ===================Wait for frames then close excitation filters, FPGA Wait TDI=================== 15-12-21 22:40:54.148 -05 000000047 INF: FPGA: Xmit TDIYWAIT\n 15-12-21 22:40:54.150 -05 000000088 INF: ===================Camera TDI=================== 15-12-21 22:40:54.150 -05 000000034 INF: ===================Camera TDI=================== 15-12-21 22:40:54.151 -05 000000082 INF: Y Motor: Recv 1D407662\r\n 15-12-21 22:40:54.152 -05 000000082 INF: Y Motor: Recv 1G\r\n 15-12-21 22:40:54.158 -05 000000082 INF: Y Motor: Xmit 1D\n 15-12-21 22:40:54.166 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:54.189 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:54.222 -05 000000082 INF: Y Motor: Recv 1D\r\n 15-12-21 22:40:54.222 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:54.223 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.052C:A1\r\n 15-12-21 22:40:54.223 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:54.223 -05 000000082 INF: Y Motor: Recv *407662\r\n 15-12-21 22:40:54.224 -05 000000082 INF: Y Motor: WaitUntilStopped 76451 15-12-21 22:40:54.444 -05 000000051 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2107=================== 15-12-21 22:40:54.463 -05 000000080 INF: FPGA: Recv ZWAIT 15-12-21 22:40:54.467 -05 000000078 INF: ====================================== 15-12-21 22:40:54.469 -05 000000038 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106=================== 15-12-21 22:40:54.481 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:54.533 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:54.535 -05 000000060 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2110, Registering and Extracting C044 L002 T2109=================== 15-12-21 22:40:54.536 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:54.536 -05 000000089 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2110, Registering and Extracting C044 L002 T2109=================== 15-12-21 22:40:54.593 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:54.593 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:54.618 -05 000000034 INF: ===================Frame #4=================== 15-12-21 22:40:54.618 -05 000000088 INF: ===================Frame #4=================== 15-12-21 22:40:54.706 -05 000000040 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2110=================== 15-12-21 22:40:54.772 -05 000000075 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2110, Registering and Extracting C044 L002 T2111=================== 15-12-21 22:40:54.786 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:54.803 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:54.824 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:54.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:54.825 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:54.839 -05 000000077 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2110=================== 15-12-21 22:40:54.851 -05 000000071 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2110, Registering and Extracting C044 L002 T2112=================== 15-12-21 22:40:54.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:54.948 -05 000000034 INF: ===================Frame #30=================== 15-12-21 22:40:54.948 -05 000000088 INF: ===================Frame #30=================== 15-12-21 22:40:54.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:54.950 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:54.970 -05 000000048 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2110=================== 15-12-21 22:40:54.989 -05 000000027 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106=================== 15-12-21 22:40:55.052 -05 000000094 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2113, Registering and Extracting C044 L002 T2114=================== 15-12-21 22:40:55.052 -05 000000065 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2113, Registering and Extracting C044 L002 T2114=================== 15-12-21 22:40:55.072 -05 000000066 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2113=================== 15-12-21 22:40:55.074 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:55.162 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:55.162 -05 000000009 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2113, Registering and Extracting C044 L002 T2115=================== 15-12-21 22:40:55.285 -05 000000088 INF: ===================Frame #56=================== 15-12-21 22:40:55.285 -05 000000034 INF: ===================Frame #56=================== 15-12-21 22:40:55.398 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:40:55.412 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:55.462 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:55.463 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.998C:A1\r\n 15-12-21 22:40:55.463 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:55.579 -05 000000011 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2113=================== 15-12-21 22:40:55.598 -05 000000074 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2113, Registering and Extracting C044 L002 T2116=================== 15-12-21 22:40:55.693 -05 000000034 INF: ===================Frame #89=================== 15-12-21 22:40:55.696 -05 000000088 INF: ===================Frame #89=================== 15-12-21 22:40:55.712 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:55.776 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:55.844 -05 000000034 INF: ===================Frame #101=================== 15-12-21 22:40:55.846 -05 000000088 INF: ===================Frame #101=================== 15-12-21 22:40:55.995 -05 000000034 INF: ===================Frame #112=================== 15-12-21 22:40:55.996 -05 000000088 INF: ===================Frame #113=================== 15-12-21 22:40:56.026 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:56.088 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:56.195 -05 000000088 INF: ===================Frame #128=================== 15-12-21 22:40:56.258 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:56.322 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:56.322 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:56.338 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:56.384 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:56.429 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:56.447 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:56.447 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:56.548 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:56.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:56.571 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:56.634 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:56.689 -05 000000034 INF: ===================Frame #167=================== 15-12-21 22:40:56.695 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:56.695 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Pumping Reagent USM (3)=================== 15-12-21 22:40:56.795 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:40:56.841 -05 000000034 INF: ===================Frame #179=================== 15-12-21 22:40:56.881 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 22:40:56.881 -05 000000062 INF: Current Position of Pump is: 37440 15-12-21 22:40:56.881 -05 000000062 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after PumpSolution 15-12-21 22:40:56.981 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:40:56.992 -05 000000034 INF: ===================Frame #191=================== 15-12-21 22:40:56.992 -05 000000088 INF: ===================Frame #191=================== 15-12-21 22:40:57.080 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:57.143 -05 000000088 INF: ===================Frame #203=================== 15-12-21 22:40:57.143 -05 000000034 INF: ===================Frame #203=================== 15-12-21 22:40:57.194 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:57.257 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:40:57.294 -05 000000034 INF: ===================Frame #215=================== 15-12-21 22:40:57.294 -05 000000088 INF: ===================Frame #215=================== 15-12-21 22:40:57.330 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:40:57.399 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 41.453C:A1\r\n 15-12-21 22:40:57.399 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:57.444 -05 000000088 INF: ===================Frame #227=================== 15-12-21 22:40:57.444 -05 000000034 INF: ===================Frame #227=================== 15-12-21 22:40:57.508 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:40:57.568 -05 000000062 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:40:57.568 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:57.569 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Closing shutoff valve=================== 15-12-21 22:40:57.569 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:57.598 -05 000000088 INF: ===================Frame #239=================== 15-12-21 22:40:57.598 -05 000000034 INF: ===================Frame #239=================== 15-12-21 22:40:57.649 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 1:A1\r\n 15-12-21 22:40:57.649 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:57.748 -05 000000034 INF: ===================Frame #251=================== 15-12-21 22:40:57.749 -05 000000088 INF: ===================Frame #251=================== 15-12-21 22:40:57.873 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit asyphon:1:0\r 15-12-21 22:40:57.898 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv A1\r\n 15-12-21 22:40:57.898 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:57.900 -05 000000088 INF: ===================Frame #263=================== 15-12-21 22:40:57.900 -05 000000034 INF: ===================Frame #263=================== 15-12-21 22:40:58.006 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:58.023 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:58.023 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:58.050 -05 000000034 INF: ===================Frame #275=================== 15-12-21 22:40:58.050 -05 000000088 INF: ===================Frame #275=================== 15-12-21 22:40:58.133 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?asyphon:1\r 15-12-21 22:40:58.200 -05 000000034 INF: ===================Frame #287=================== 15-12-21 22:40:58.200 -05 000000088 INF: ===================Frame #287=================== 15-12-21 22:40:58.208 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 0:A1\r\n 15-12-21 22:40:58.208 -05 000000062 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:58.315 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:58.316 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:58.316 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:58.318 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:58.318 -05 000000062 INF: WaitCommand(5000) start 15-12-21 22:40:58.318 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 5 of 5 seconds left=================== 15-12-21 22:40:58.334 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:58.334 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:58.351 -05 000000034 INF: ===================Frame #299=================== 15-12-21 22:40:58.351 -05 000000088 INF: ===================Frame #299=================== 15-12-21 22:40:58.439 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:58.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:58.458 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:58.502 -05 000000088 INF: ===================Frame #311=================== 15-12-21 22:40:58.502 -05 000000034 INF: ===================Frame #311=================== 15-12-21 22:40:58.654 -05 000000088 INF: ===================Frame #323=================== 15-12-21 22:40:58.654 -05 000000034 INF: ===================Frame #323=================== 15-12-21 22:40:58.807 -05 000000088 INF: ===================Frame #335=================== 15-12-21 22:40:58.808 -05 000000034 INF: ===================Frame #335=================== 15-12-21 22:40:58.908 -05 000000060 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106, Registering and Extracting C044 L002 T2113=================== 15-12-21 22:40:58.958 -05 000000088 INF: ===================Frame #347=================== 15-12-21 22:40:58.959 -05 000000034 INF: ===================Frame #347=================== 15-12-21 22:40:58.971 -05 000000089 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105, Registering and Extracting C044 L002 T2106=================== 15-12-21 22:40:59.109 -05 000000034 INF: ===================Frame #359=================== 15-12-21 22:40:59.110 -05 000000088 INF: ===================Frame #359=================== 15-12-21 22:40:59.223 -05 000000075 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104, Registering and Extracting C044 L002 T2105=================== 15-12-21 22:40:59.260 -05 000000088 INF: ===================Frame #371=================== 15-12-21 22:40:59.260 -05 000000034 INF: ===================Frame #371=================== 15-12-21 22:40:59.310 -05 000000071 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102, Registering and Extracting C044 L002 T2103, Registering and Extracting C044 L002 T2104=================== 15-12-21 22:40:59.322 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:40:59.323 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 4 of 5 seconds left=================== 15-12-21 22:40:59.363 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:40:59.395 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.050C:A1\r\n 15-12-21 22:40:59.395 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:59.410 -05 000000034 INF: ===================Frame #383=================== 15-12-21 22:40:59.410 -05 000000088 INF: ===================Frame #383=================== 15-12-21 22:40:59.560 -05 000000088 INF: ===================Frame #394=================== 15-12-21 22:40:59.560 -05 000000034 INF: ===================Frame #394=================== 15-12-21 22:40:59.680 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:40:59.710 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:40:59.710 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:59.719 -05 000000094 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102=================== 15-12-21 22:40:59.719 -05 000000065 INF: ===================Registering and Extracting C044 L002 T2101, Registering and Extracting C044 L002 T2102=================== 15-12-21 22:40:59.811 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:40:59.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:59.832 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:40:59.938 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:40:59.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:40:59.955 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:00.030 -05 000000009 INF: ===================Registering and Extracting C044 L002 T2101=================== 15-12-21 22:41:00.195 -05 000000088 INF: ===================Frame #445=================== 15-12-21 22:41:00.226 -05 000000034 INF: ===================Frame #447=================== 15-12-21 22:41:00.297 -05 000000074 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:41:00.309 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:41:00.315 -05 000000053 INF: ===================Saving Thumbnail Image Channel A=================== 15-12-21 22:41:00.323 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:41:00.323 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 3 of 5 seconds left=================== 15-12-21 22:41:00.346 -05 000000088 INF: ===================Frame #457=================== 15-12-21 22:41:00.376 -05 000000034 INF: ===================Frame #459=================== 15-12-21 22:41:00.407 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:41:00.412 -05 000000053 INF: ===================Saving Thumbnail Image Channel T=================== 15-12-21 22:41:00.496 -05 000000088 INF: ===================Frame #468=================== 15-12-21 22:41:00.505 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:41:00.511 -05 000000053 INF: ===================Saving Thumbnail Image Channel C=================== 15-12-21 22:41:00.527 -05 000000034 INF: ===================Frame #471=================== 15-12-21 22:41:00.570 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:41:00.581 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3.996C:A1\r\n 15-12-21 22:41:00.581 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:00.625 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:41:00.630 -05 000000053 INF: ===================Saving Thumbnail Image Channel G=================== 15-12-21 22:41:00.677 -05 000000034 INF: ===================Frame #483=================== 15-12-21 22:41:00.733 -05 000000088 INF: ===================Frame #487=================== 15-12-21 22:41:00.777 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:41:00.828 -05 000000034 INF: ===================Frame #495=================== 15-12-21 22:41:00.883 -05 000000088 INF: ===================Frame #499=================== 15-12-21 22:41:00.980 -05 000000034 INF: ===================Frame #507=================== 15-12-21 22:41:01.034 -05 000000088 INF: ===================Frame #511=================== 15-12-21 22:41:01.130 -05 000000034 INF: ===================Frame #519=================== 15-12-21 22:41:01.184 -05 000000088 INF: ===================Frame #523=================== 15-12-21 22:41:01.187 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:41:01.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:41:01.204 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:01.281 -05 000000034 INF: ===================Frame #530=================== 15-12-21 22:41:01.311 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:41:01.324 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:41:01.325 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 2 of 5 seconds left=================== 15-12-21 22:41:01.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:01.330 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:01.334 -05 000000088 INF: ===================Frame #535=================== 15-12-21 22:41:01.443 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:41:01.484 -05 000000088 INF: ===================Frame #547=================== 15-12-21 22:41:01.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:01.515 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:01.635 -05 000000088 INF: ===================Frame #558=================== 15-12-21 22:41:01.680 -05 000000034 INF: ===================Frame #562=================== 15-12-21 22:41:01.751 -05 000000053 INF: ===================Image Analysis Flow Cell A 01=================== 15-12-21 22:41:01.931 -05 000000034 INF: ===================Frame #582=================== 15-12-21 22:41:01.963 -05 000000088 INF: ===================Frame #584=================== 15-12-21 22:41:02.109 -05 000000034 INF: ===================Frame #596=================== 15-12-21 22:41:02.166 -05 000000088 INF: ===================Frame #600=================== 15-12-21 22:41:02.279 -05 000000034 INF: ===================Frame #609=================== 15-12-21 22:41:02.325 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:41:02.325 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 1 of 5 seconds left=================== 15-12-21 22:41:02.340 -05 000000088 INF: ===================Frame #614=================== 15-12-21 22:41:02.429 -05 000000034 INF: ===================Frame #621=================== 15-12-21 22:41:02.503 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:41:02.505 -05 000000088 INF: ===================Frame #627=================== 15-12-21 22:41:02.515 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 37.828C:A1\r\n 15-12-21 22:41:02.515 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:02.579 -05 000000034 INF: ===================Frame #633=================== 15-12-21 22:41:02.655 -05 000000088 INF: ===================Frame #639=================== 15-12-21 22:41:02.729 -05 000000034 INF: ===================Frame #645=================== 15-12-21 22:41:02.805 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:41:02.805 -05 000000088 INF: ===================Frame #651=================== 15-12-21 22:41:02.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:41:02.826 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:02.880 -05 000000034 INF: ===================Frame #657=================== 15-12-21 22:41:02.929 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:41:02.953 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:02.953 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:02.956 -05 000000088 INF: ===================Frame #663=================== 15-12-21 22:41:03.032 -05 000000034 INF: ===================Frame #669=================== 15-12-21 22:41:03.059 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:41:03.076 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:03.076 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:03.107 -05 000000088 INF: ===================Frame #675=================== 15-12-21 22:41:03.183 -05 000000034 INF: ===================Frame #681=================== 15-12-21 22:41:03.257 -05 000000088 INF: ===================Frame #687=================== 15-12-21 22:41:03.319 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:41:03.320 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:41:03.320 -05 000000062 INF: WaitCommand(5000) end 15-12-21 22:41:03.320 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:41:03.321 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:41:03.326 -05 000000062 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation=================== 15-12-21 22:41:03.328 -05 000000095 INF: ===================WaitCommand=================== 15-12-21 22:41:03.329 -05 000000068 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:41:03.329 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:03.330 -05 000000095 INF: WaitCommand(10000) start 15-12-21 22:41:03.330 -05 000000095 INF: ===================Delay 10 of 10 seconds left=================== 15-12-21 22:41:03.340 -05 000000034 INF: ===================Frame #693=================== 15-12-21 22:41:03.377 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:41:03.408 -05 000000088 INF: ===================Frame #699=================== 15-12-21 22:41:03.478 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:03.546 -05 000000034 INF: ===================Frame #708=================== 15-12-21 22:41:03.547 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:41:03.560 -05 000000088 INF: ===================Frame #711=================== 15-12-21 22:41:03.650 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1?\r 15-12-21 22:41:03.880 -05 000000088 INF: ===================Frame #723=================== 15-12-21 22:41:03.886 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0`37440 (0x03)\r\n(0xFF) 15-12-21 22:41:03.886 -05 000000068 INF: Current Position of Pump is: 37440 15-12-21 22:41:03.886 -05 000000068 INF: Dispense Steps 48000 is greater than steps to home syringe 37440, reducing number of steps to 37440 15-12-21 22:41:03.886 -05 000000068 INF: ===================Dispensing port PortC=================== 1-01-01 00:00:00.000 -05 000000000 INF: AsyncDelayTimer did not wait because wait time had elapsed 15-12-21 22:41:03.987 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1V8000OD37440R\r 15-12-21 22:41:04.031 -05 000000088 INF: ===================Frame #748=================== 15-12-21 22:41:04.062 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:04.162 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:04.246 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:04.260 -05 000000034 INF: ===================Frame #766=================== 15-12-21 22:41:04.330 -05 000000095 INF: ===================Delay 9 of 10 seconds left=================== 15-12-21 22:41:04.358 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:41:04.371 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:41:04.371 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:04.395 -05 000000088 INF: ===================Frame #777=================== 15-12-21 22:41:04.478 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:41:04.489 -05 000000034 INF: ===================Frame #784=================== 15-12-21 22:41:04.496 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:04.547 -05 000000088 INF: ===================Frame #789=================== 15-12-21 22:41:04.556 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:04.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:04.557 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:04.663 -05 000000034 INF: ===================Frame #798=================== 15-12-21 22:41:04.664 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:41:04.684 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 20.033C:A1\r\n 15-12-21 22:41:04.684 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:04.697 -05 000000088 INF: ===================Frame #801=================== 15-12-21 22:41:04.787 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:41:04.806 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:04.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:04.809 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:04.834 -05 000000034 INF: ===================Frame #811=================== 15-12-21 22:41:04.847 -05 000000088 INF: ===================Frame #812=================== 15-12-21 22:41:04.869 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:04.985 -05 000000034 INF: ===================Frame #823=================== 15-12-21 22:41:05.067 -05 000000088 INF: ===================Frame #830=================== 15-12-21 22:41:05.119 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:05.144 -05 000000034 INF: ===================Frame #836=================== 15-12-21 22:41:05.182 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:05.236 -05 000000088 INF: ===================Frame #843=================== 15-12-21 22:41:05.330 -05 000000095 INF: ===================Delay 8 of 10 seconds left=================== 15-12-21 22:41:05.336 -05 000000034 INF: ===================Frame #851=================== 15-12-21 22:41:05.386 -05 000000088 INF: ===================Frame #855=================== 15-12-21 22:41:05.432 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:05.488 -05 000000034 INF: ===================Frame #863=================== 15-12-21 22:41:05.492 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:05.536 -05 000000088 INF: ===================Frame #867=================== 15-12-21 22:41:05.638 -05 000000034 INF: ===================Frame #875=================== 15-12-21 22:41:05.684 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:41:05.686 -05 000000088 INF: ===================Frame #879=================== 15-12-21 22:41:05.742 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:05.744 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.003C:A1\r\n 15-12-21 22:41:05.744 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:05.788 -05 000000034 INF: ===================Frame #887=================== 15-12-21 22:41:05.805 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:05.837 -05 000000088 INF: ===================Frame #891=================== 15-12-21 22:41:05.938 -05 000000034 INF: ===================Frame #899=================== 15-12-21 22:41:05.987 -05 000000088 INF: ===================Frame #903=================== 15-12-21 22:41:06.040 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:41:06.055 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:06.057 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:41:06.057 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:06.089 -05 000000034 INF: ===================Frame #911=================== 15-12-21 22:41:06.118 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:06.137 -05 000000088 INF: ===================Frame #914=================== 15-12-21 22:41:06.164 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:41:06.181 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:06.181 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:06.239 -05 000000034 INF: ===================Frame #922=================== 15-12-21 22:41:06.288 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:41:06.305 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:06.305 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:06.330 -05 000000095 INF: ===================Delay 7 of 10 seconds left=================== 15-12-21 22:41:06.368 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:06.380 -05 000000088 INF: ===================Frame #934=================== 15-12-21 22:41:06.428 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:06.486 -05 000000034 INF: ===================Frame #942=================== 15-12-21 22:41:06.552 -05 000000088 INF: ===================Frame #947=================== 15-12-21 22:41:06.657 -05 000000034 INF: ===================Frame #956=================== 15-12-21 22:41:06.678 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:06.702 -05 000000088 INF: ===================Frame #959=================== 15-12-21 22:41:06.742 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:06.820 -05 000000034 INF: ===================Frame #968=================== 15-12-21 22:41:06.852 -05 000000088 INF: ===================Frame #971=================== 15-12-21 22:41:06.985 -05 000000034 INF: ===================Frame #981=================== 15-12-21 22:41:06.992 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:07.002 -05 000000088 INF: ===================Frame #983=================== 15-12-21 22:41:07.053 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:07.136 -05 000000034 INF: ===================Frame #993=================== 15-12-21 22:41:07.152 -05 000000088 INF: ===================Frame #995=================== 15-12-21 22:41:07.286 -05 000000034 INF: ===================Frame #1005=================== 15-12-21 22:41:07.302 -05 000000088 INF: ===================Frame #1007=================== 15-12-21 22:41:07.303 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:07.330 -05 000000095 INF: ===================Delay 6 of 10 seconds left=================== 15-12-21 22:41:07.367 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:07.437 -05 000000034 INF: ===================Frame #1017=================== 15-12-21 22:41:07.453 -05 000000088 INF: ===================Frame #1018=================== 15-12-21 22:41:07.531 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:41:07.554 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:41:07.554 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:07.588 -05 000000034 INF: ===================Frame #1029=================== 15-12-21 22:41:07.617 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:07.653 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:1\r 15-12-21 22:41:07.679 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:07.680 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 34.599C:A1\r\n 15-12-21 22:41:07.680 -05 000000013 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:07.686 -05 000000088 INF: ===================Frame #1037=================== 15-12-21 22:41:07.739 -05 000000034 INF: ===================Frame #1041=================== 15-12-21 22:41:07.780 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:41:07.802 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:07.802 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:07.836 -05 000000088 INF: ===================Frame #1049=================== 15-12-21 22:41:07.889 -05 000000034 INF: ===================Frame #1053=================== 15-12-21 22:41:07.906 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:41:07.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:07.926 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:07.929 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:07.987 -05 000000088 INF: ===================Frame #1061=================== 15-12-21 22:41:07.991 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:08.039 -05 000000034 INF: ===================Frame #1065=================== 15-12-21 22:41:08.138 -05 000000088 INF: ===================Frame #1073=================== 15-12-21 22:41:08.190 -05 000000034 INF: ===================Frame #1077=================== 15-12-21 22:41:08.241 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:08.288 -05 000000088 INF: ===================Frame #1084=================== 15-12-21 22:41:08.301 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:08.331 -05 000000095 INF: ===================Delay 5 of 10 seconds left=================== 15-12-21 22:41:08.340 -05 000000034 INF: ===================Frame #1089=================== 15-12-21 22:41:08.490 -05 000000034 INF: ===================Frame #1100=================== 15-12-21 22:41:08.505 -05 000000088 INF: ===================Frame #1102=================== 15-12-21 22:41:08.551 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:08.613 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:08.684 -05 000000088 INF: ===================Frame #1116=================== 15-12-21 22:41:08.786 -05 000000034 INF: ===================Frame #1124=================== 15-12-21 22:41:08.850 -05 000000088 INF: ===================Frame #1129=================== 15-12-21 22:41:08.863 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:08.927 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:08.959 -05 000000034 INF: ===================Frame #1138=================== 15-12-21 22:41:09.000 -05 000000088 INF: ===================Frame #1141=================== 15-12-21 22:41:09.122 -05 000000034 INF: ===================Frame #1150=================== 15-12-21 22:41:09.150 -05 000000088 INF: ===================Frame #1153=================== 15-12-21 22:41:09.154 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:41:09.175 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:41:09.175 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:09.177 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:09.240 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:41:09.240 -05 000000068 INF: ===================Dispensing Flowcell #2 pump index #0 volume 0 at the rate of 0 to waste=================== 15-12-21 22:41:09.240 -05 000000068 INF: KloehnPump B (KLOEHNB): Waiting 0 ms before setting solenoid valve back to 'aspirate' position after DispenseSolution 15-12-21 22:41:09.282 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:41:09.284 -05 000000034 INF: ===================Frame #1163=================== 15-12-21 22:41:09.300 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:09.300 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:09.300 -05 000000088 INF: ===================Frame #1165=================== 15-12-21 22:41:09.331 -05 000000095 INF: ===================Delay 4 of 10 seconds left=================== 15-12-21 22:41:09.340 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1IR\r 15-12-21 22:41:09.410 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:41:09.424 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:09.425 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:09.425 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:09.434 -05 000000034 INF: ===================Frame #1175=================== 15-12-21 22:41:09.450 -05 000000088 INF: ===================Frame #1176=================== 15-12-21 22:41:09.524 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:09.586 -05 000000034 INF: ===================Frame #1187=================== 15-12-21 22:41:09.610 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0@(0x03)\r\n(0xFF) 15-12-21 22:41:09.658 -05 000000088 INF: ===================Frame #1193=================== 15-12-21 22:41:09.737 -05 000000034 INF: ===================Frame #1199=================== 15-12-21 22:41:09.787 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?FCTEMP:0\r 15-12-21 22:41:09.808 -05 000000088 INF: ===================Frame #1205=================== 15-12-21 22:41:09.860 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Xmit /1\r 15-12-21 22:41:09.864 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 19.996C:A1\r\n 15-12-21 22:41:09.864 -05 000000012 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:09.887 -05 000000034 INF: ===================Frame #1211=================== 15-12-21 22:41:09.922 -05 000000068 INF: KloehnSerialPort B (KLOEHNB): Recv /0`(0x03)\r\n(0xFF) 15-12-21 22:41:09.922 -05 000000068 INF: ====================================== 15-12-21 22:41:09.959 -05 000000088 INF: ===================Frame #1217=================== 15-12-21 22:41:10.037 -05 000000034 INF: ===================Frame #1223=================== 15-12-21 22:41:10.109 -05 000000088 INF: ===================Frame #1228=================== 15-12-21 22:41:10.188 -05 000000034 INF: ===================Frame #1235=================== 15-12-21 22:41:10.312 -05 000000088 INF: ===================Frame #1245=================== 15-12-21 22:41:10.331 -05 000000095 INF: ===================Delay 3 of 10 seconds left=================== 15-12-21 22:41:10.338 -05 000000034 INF: ===================Frame #1247=================== 15-12-21 22:41:10.421 -05 000000078 INF: FPGA: Recv TDIYWAIT 15-12-21 22:41:10.422 -05 000000047 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:41:10.425 -05 000000047 INF: ===================Wait for frames then close excitation filters, Close excitation filters=================== 15-12-21 22:41:10.433 -05 000000024 INF: ===================Move Excitation Filter 2 to 'BlockPosition'=================== 15-12-21 22:41:10.433 -05 000000049 INF: ===================Move Excitation Filter 1 to 'BlockPosition'=================== 15-12-21 22:41:10.434 -05 000000024 INF: Excitation Filter 2: Moving 'Excitation Filter 2' to index 0 (BlockPosition) 15-12-21 22:41:10.435 -05 000000024 INF: Excitation Filter 2: Moving to 0.0000 degrees 15-12-21 22:41:10.436 -05 000000024 INF: Excitation Filter 2: Moving 107 steps 15-12-21 22:41:10.436 -05 000000024 INF: FPGA: Xmit EX2MV 107\n 15-12-21 22:41:10.436 -05 000000049 INF: Excitation Filter 1: Moving 'Excitation Filter 1' to index 0 (BlockPosition) 15-12-21 22:41:10.436 -05 000000049 INF: Excitation Filter 1: Moving to 0.0000 degrees 15-12-21 22:41:10.437 -05 000000049 INF: Excitation Filter 1: Moving 36 steps 15-12-21 22:41:10.439 -05 000000049 INF: FPGA: Xmit EX1MV 36\n 15-12-21 22:41:10.468 -05 000000088 INF: ===================Frame #1250=================== 15-12-21 22:41:10.488 -05 000000034 INF: ===================Frame #1250=================== 15-12-21 22:41:10.504 -05 000000088 INF: Camera complete - got 1250 frames. 15-12-21 22:41:10.505 -05 000000088 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:41:10.616 -05 000000081 INF: FPGA: Recv EX1MV 15-12-21 22:41:10.616 -05 000000049 INF: Excitation Filter 1: Moved 36 steps in 179.0935 ms 15-12-21 22:41:10.616 -05 000000049 INF: Excitation Filter 1: Moved to 0.0000 degrees (target was 0.0000) in 179.7552 ms 15-12-21 22:41:10.616 -05 000000049 INF: Excitation Filter 1: Moved 'Excitation Filter 1' to index 0 (BlockPosition) in 179.9188 ms 15-12-21 22:41:10.617 -05 000000049 INF: ====================================== 15-12-21 22:41:10.688 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSTAT\r 15-12-21 22:41:10.736 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 3:A1\r\n 15-12-21 22:41:10.736 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:10.794 -05 000000088 INF: ===================Camera TDI=================== 15-12-21 22:41:10.805 -05 000000034 INF: Camera complete - got 1250 frames. 15-12-21 22:41:10.806 -05 000000034 INF: ===================CameraTDI Cleanup=================== 15-12-21 22:41:10.819 -05 000000088 INF: ====================================== 15-12-21 22:41:10.842 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:0\r 15-12-21 22:41:10.844 -05 000000079 INF: FPGA: Recv EX2MV 15-12-21 22:41:10.844 -05 000000024 INF: Excitation Filter 2: Moved 107 steps in 408.2071 ms 15-12-21 22:41:10.844 -05 000000024 INF: Excitation Filter 2: Moved to 0.0000 degrees (target was 0.0000) in 408.4517 ms 15-12-21 22:41:10.844 -05 000000024 INF: Excitation Filter 2: Moved 'Excitation Filter 2' to index 0 (BlockPosition) in 410.2907 ms 15-12-21 22:41:10.844 -05 000000024 INF: ====================================== 15-12-21 22:41:10.849 -05 000000047 INF: ===================Wait for frames then close excitation filters=================== 15-12-21 22:41:10.850 -05 000000047 INF: ====================================== 15-12-21 22:41:10.862 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:10.862 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:10.998 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?PRETMP\r 15-12-21 22:41:10.999 -05 000000034 INF: ===================Camera TDI=================== 15-12-21 22:41:11.003 -05 000000082 INF: Y Motor: Moved to 9.0764 after 16780 ms 15-12-21 22:41:11.003 -05 000000082 INF: ====================================== 15-12-21 22:41:11.015 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Recv 4.001C:A1\r\n 15-12-21 22:41:11.015 -05 000000014 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:11.026 -05 000000034 INF: ====================================== 15-12-21 22:41:11.033 -05 000000028 INF: ===================Camera TDI=================== 15-12-21 22:41:11.035 -05 000000028 INF: ====================================== 15-12-21 22:41:11.036 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:41:11.038 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, Scanning=================== 15-12-21 22:41:11.043 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.043 -05 000000057 INF: FPGA: Xmit TDICLINES\n 15-12-21 22:41:11.060 -05 000000047 INF: FPGA: Recv TDICLINES 9556 15-12-21 22:41:11.060 -05 000000057 INF: FPGA: Xmit TDIYERD\n 15-12-21 22:41:11.115 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Xmit ?VSENSE:1\r 15-12-21 22:41:11.124 -05 000000022 INF: FPGA: Recv TDIYERD 907645 15-12-21 22:41:11.124 -05 000000057 INF: FPGA: Xmit ZADCR\n 15-12-21 22:41:11.141 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Recv b:A1\r\n 15-12-21 22:41:11.141 -05 000000015 INF: ARM9BoardSerialPort (ARM9CHEM): Slow Flush 15-12-21 22:41:11.186 -05 000000080 INF: FPGA: Recv ZADCR 22310 15-12-21 22:41:11.186 -05 000000057 INF: At scan end Y pos = 9.076 and Z pos = -0.085. Y moved -60.304 mm 15-12-21 22:41:11.186 -05 000000057 INF: FPGA: Xmit TDIPULSES\n 15-12-21 22:41:11.247 -05 000000022 INF: FPGA: Recv TDIPULSES 160001 15-12-21 22:41:11.247 -05 000000057 INF: The FPGA sent 160000 triggers to the camera; expected 160000 15-12-21 22:41:11.247 -05 000000057 INF: TDIScan finished after 21661.1347 ms 15-12-21 22:41:11.247 -05 000000057 INF: Image[0]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:41:11.247 -05 000000057 INF: Image[2]: Y should trigger at 69.380 mm, 2nd row was at 69.369 mm (error = -0.011 mm) 15-12-21 22:41:11.251 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.277 -05 000000057 INF: Z jump check: There were 0/160000 lines (retry if > 900) at which Delta Z >= 10 um; span = 1000 lines. Largest delta = 0.989 um 15-12-21 22:41:11.278 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.280 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.285 -05 000000068 INF: ===================Dither Clean Up Command=================== 15-12-21 22:41:11.285 -05 000000047 INF: ===================Set Y Motor Motor Velocity=================== 15-12-21 22:41:11.285 -05 000000037 INF: ===================Set Z Motor Motor Velocity=================== 15-12-21 22:41:11.286 -05 000000047 INF: Y Motor: Xmit 1V1.92200\n 15-12-21 22:41:11.286 -05 000000080 INF: ===================Set YMotor gains for fast moves=================== 15-12-21 22:41:11.286 -05 000000037 INF: Z Motor: Set Z velocity to 1.000 mm/s / 1288471 16.16 format 15-12-21 22:41:11.286 -05 000000037 INF: FPGA: Xmit ZSTEP 1288471\n 15-12-21 22:41:11.290 -05 000000063 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:41:11.290 -05 000000024 INF: ===================DitherPostSwathFocusCleanup=================== 15-12-21 22:41:11.294 -05 000000063 INF: ===================LFT:Extracting coords=================== 15-12-21 22:41:11.296 -05 000000024 INF: FPGA: Xmit ZSEL 0\n 15-12-21 22:41:11.309 -05 000000085 INF: FPGA: Recv ZSTEP 15-12-21 22:41:11.310 -05 000000037 INF: ====================================== 15-12-21 22:41:11.310 -05 000000047 INF: Y Motor: Recv 1V1.92200\r\n 15-12-21 22:41:11.311 -05 000000080 INF: Y Motor: Xmit 1W(GP,7)\n 15-12-21 22:41:11.311 -05 000000047 INF: ====================================== 15-12-21 22:41:11.330 -05 000000063 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:41:11.331 -05 000000095 INF: ===================Delay 2 of 10 seconds left=================== 15-12-21 22:41:11.331 -05 000000063 INF: ===================LookupFocusTrackingCleanup, LookupFocusTrackingCleanupCommand=================== 15-12-21 22:41:11.337 -05 000000079 INF: ===================LookupFocusTracking=================== 15-12-21 22:41:11.337 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 22:41:11.337 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:41:11.337 -05 000000034 INF: ===================LookupFocusTracking=================== 15-12-21 22:41:11.337 -05 000000079 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:41:11.341 -05 000000078 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:41:11.341 -05 000000034 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:41:11.348 -05 000000037 INF: ===================Lookup Focus Tracking=================== 15-12-21 22:41:11.374 -05 000000029 INF: FPGA: Recv ZSEL 15-12-21 22:41:11.374 -05 000000024 INF: FPGA: Xmit ZDACW 28369\n 15-12-21 22:41:11.375 -05 000000080 INF: Y Motor: Recv 1W(GP,7)\r\n 15-12-21 22:41:11.376 -05 000000080 INF: Y Motor: Gains are set for FastMove: GP=7.00, GI=10.00, GV(D)=1.50, GF=5.00 15-12-21 22:41:11.376 -05 000000080 INF: ====================================== 15-12-21 22:41:11.435 -05 000000022 INF: FPGA: Recv ZDACW 15-12-21 22:41:11.436 -05 000000024 INF: ====================================== 15-12-21 22:41:11.514 -05 000000079 INF: LFT found best fwhm score 2.7264 in 127 ms 15-12-21 22:41:11.514 -05 000000079 INF: LFT found good score at index 8189 with fwhm value 2.7264. Next cycle, cycle 45 starting Z position for bottom surface is at -0.087 mm FC:A, C:44,L:2,B 15-12-21 22:41:11.514 -05 000000034 INF: LFT found best fwhm score 2.77573 in 127 ms 15-12-21 22:41:11.514 -05 000000034 INF: LFT found good score at index 5961 with fwhm value 2.77573. Next cycle, cycle 45 starting Z position for bottom surface is at -0.088 mm FC:A, C:44,L:2,B 15-12-21 22:41:11.515 -05 000000034 INF: ===================LookupFocusTracking=================== 15-12-21 22:41:11.515 -05 000000079 INF: ===================LookupFocusTracking=================== 15-12-21 22:41:11.515 -05 000000034 INF: ====================================== 15-12-21 22:41:11.515 -05 000000079 INF: ====================================== 15-12-21 22:41:11.576 -05 000000078 INF: LFT found best fwhm score 2.895742 in 191 ms 15-12-21 22:41:11.576 -05 000000078 INF: LFT found good score at index 5933 with fwhm value 2.895742. Next cycle, cycle 45 starting Z position for bottom surface is at -0.088 mm FC:A, C:44,L:2,B 15-12-21 22:41:11.577 -05 000000078 INF: ===================LookupFocusTracking=================== 15-12-21 22:41:11.577 -05 000000078 INF: ====================================== 15-12-21 22:41:11.577 -05 000000037 INF: LFT found best fwhm score 2.751502 in 191 ms 15-12-21 22:41:11.577 -05 000000037 INF: LFT found good score at index 1453 with fwhm value 2.751502. Next cycle, cycle 45 starting Z position for bottom surface is at -0.089 mm FC:A, C:44,L:2,B 15-12-21 22:41:11.578 -05 000000037 INF: ===================LookupFocusTracking=================== 15-12-21 22:41:11.578 -05 000000037 INF: ====================================== 15-12-21 22:41:11.587 -05 000000063 INF: ===================LookupFocusTrackingCleanup=================== 15-12-21 22:41:11.591 -05 000000063 INF: LFT weighted average best Z for bottom surface is at -0.088mm FC:A, C:44,L:2,B 15-12-21 22:41:11.592 -05 000000063 INF: ====================================== 15-12-21 22:41:11.595 -05 000000068 INF: ====================================== 15-12-21 22:41:11.600 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.601 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(A)=================== 15-12-21 22:41:11.601 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.601 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(G)=================== 15-12-21 22:41:11.601 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.601 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(T)=================== 15-12-21 22:41:11.601 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C, HandleImage(C)=================== 15-12-21 22:41:11.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Channels A, G, T, C=================== 15-12-21 22:41:11.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:41:11.602 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:41:11.603 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38, Waiting for image analysis=================== 15-12-21 22:41:11.605 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2, Swath 2 - X = 17.939 Y = 39.38=================== 15-12-21 22:41:11.605 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Waiting for image analysis, Delay 2 of 10 seconds left=================== 15-12-21 22:41:11.605 -05 000000057 INF: ===================Flow Cell B (HHKV7BCXX), Cycle #41, Chemistry CompleteCycle, Incorporation, Delay 2 of 10 seconds left=================== 15-12-21 22:41:11.605 -05 000000057 INF: Waited 2 ms to submit image to image processing queue. Lock wait time: 0, thread wait time 2, buffer wait time 0 15-12-21 22:41:11.605 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:41:11.606 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:41:11.606 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing=================== 15-12-21 22:41:11.608 -05 000000053 INF: ===================Image Analysis Flow Cell A 01, ImageProcessing, ProcessLateCycleAnalysis=================== 15-12-21 22:41:11.608 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface, Lane 2=================== 15-12-21 22:41:11.610 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging, Bottom Surface=================== 15-12-21 22:41:11.611 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:41:11.611 -05 000000074 INF: ===================Registering and Extracting C044 L002 T2201, Registering and Extracting C044 L002 T2202, Registering and Extracting C044 L002 T2203=================== 15-12-21 22:41:11.611 -05 000000094 INF: ===================Registering and Extracting C044 L002 T2201, Registering and Extracting C044 L002 T2202, Registering and Extracting C044 L002 T2203, Registering and Extracting C044 L002 T2204=================== 15-12-21 22:41:11.611 -05 000000065 INF: ===================Registering and Extracting C044 L002 T2201, Registering and Extracting C044 L002 T2202, Registering and Extracting C044 L002 T2203, Registering and Extracting C044 L002 T2204=================== 15-12-21 22:41:11.611 -05 000000009 INF: ===================Registering and Extracting C044 L002 T2201, Registering and Extracting C044 L002 T2202, Registering and Extracting C044 L002 T2203, Registering and Extracting C044 L002 T2204, Registering and Extracting C044 L002 T2205=================== 15-12-21 22:41:11.611 -05 000000071 INF: ===================Registering and Extracting C044 L002 T2201, Registering and Extracting C044 L002 T2202, Registering and Extracting C044 L002 T2203, Registering and Extracting C044 L002 T2204, Registering and Extracting C044 L002 T2205=================== 15-12-21 22:41:11.611 -05 000000075 INF: ===================Registering and Extracting C044 L002 T2201, Registering and Extracting C044 L002 T2202, Registering and Extracting C044 L002 T2203, Registering and Extracting C044 L002 T2204, Registering and Extracting C044 L002 T2205, Registering and Extracting C044 L002 T2206=================== 15-12-21 22:41:11.611 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:41:11.612 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:41:11.621 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44, Imaging=================== 15-12-21 22:41:11.630 -05 000000089 INF: ===================Registering and Extracting C044 L002 T2201, Registering and Extracting C044 L002 T2202, Registering and Extracting C044 L002 T2203, Registering and Extracting C044 L002 T2204, Registering and Extracting C044 L002 T2205, Registering and Extracting C044 L002 T2206, Registering and Extracting C044 L002 T2207, Registering and Extracting C044 L002 T2208=================== 15-12-21 22:41:11.630 -05 000000060 INF: ===================Registering and Extracting C044 L002 T2201, Registering and Extracting C044 L002 T2202, Registering and Extracting C044 L002 T2203, Registering and Extracting C044 L002 T2204, Registering and Extracting C044 L002 T2205, Registering and Extracting C044 L002 T2206, Registering and Extracting C044 L002 T2207, Registering and Extracting C044 L002 T2208=================== 15-12-21 22:41:11.632 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX), Cycle #44=================== 15-12-21 22:41:11.634 -05 000000057 INF: ===================Flow Cell A (HCTV7BCXX)===================