Basic Statistics
Measure | Value |
---|---|
Filename | 380824_S5_L001_R1_001.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 9956551 |
Sequences flagged as poor quality | 0 |
Sequence length | 101 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCAACCGAACATCTCGT | 26324 | 0.264388742647931 | TruSeq Adapter, Index 6 (97% over 37bp) |
GCTTCACAATTTACTCATGACTCAATAAAAACGTTTGAAAGCAGTGAAAG | 14739 | 0.14803318940464424 | No Hit |
GTGCTTCACAATTTACTCATGACTCAATAAAAACGTTTGAAAGCAGTGAA | 13231 | 0.13288738238773648 | No Hit |
CTCGGAACCACCGGTGAATCCAGGCAGGGTCTGGACTCCATGAAATCCAG | 13214 | 0.13271664053144508 | No Hit |
CTCGGCATTGCTCAGAATTCTGTCCGTGTAGCATGGCAGGTCCTTGTTAG | 12192 | 0.12245204187675028 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGCAACCGAACATCGCGT | 11497 | 0.11547171304601361 | TruSeq Adapter, Index 6 (97% over 37bp) |
CACCGGTGAATCCAGGCAGGGTCTGGACTCCTTGAAATCCAGGCTTGGTA | 9977 | 0.10020538236584135 | No Hit |