## High-throughput Sequencing Projects
---
### [LSU Oil Spill MBD BS-Seq](http://onsnetwork.org/kubu4/category/lsu-c-virginica-oil-spill-mbd-bs-sequencing/)
#### Tissue: gill
#### Illumina 100SE
#### Received: 20150209
2112_lane1_NoIndex_L001_R1_001.fastq.gz
2112_lane1_NoIndex_L001_R1_002.fastq.gz
2112_lane1_NoIndex_L001_R1_003.fastq.gz
2112_lane1_NoIndex_L001_R1_004.fastq.gz
2112_lane1_NoIndex_L001_R1_005.fastq.gz
2112_lane1_NoIndex_L001_R1_006.fastq.gz
2112_lane1_NoIndex_L001_R1_007.fastq.gz
2112_lane1_NoIndex_L001_R1_008.fastq.gz
2112_lane1_NoIndex_L001_R1_009.fastq.gz
2112_lane1_NoIndex_L001_R1_010.fastq.gz
2112_lane1_NoIndex_L001_R1_011.fastq.gz
2112_lane1_NoIndex_L001_R1_012.fastq.gz
2112_lane1_NoIndex_L001_R1_013.fastq.gz
2112_lane1_NoIndex_L001_R1_014.fastq.gz
2112_lane1_NoIndex_L001_R1_015.fastq.gz

---
### [LSU Oil Spill MBD BS-Seq](http://onsnetwork.org/kubu4/category/lsu-c-virginica-oil-spill-mbd-bs-sequencing/)
#### Tissue: gill
#### Illumina 100SE
#### Received: 20150413
##### These are demultiplexed versions of the same data received 20150209

2112_lane1_ACAGTG_L001_R1_001.fastq.gz
2112_lane1_ACAGTG_L001_R1_002.fastq.gz
2112_lane1_ATCACG_L001_R1_001.fastq.gz
2112_lane1_ATCACG_L001_R1_002.fastq.gz
2112_lane1_ATCACG_L001_R1_003.fastq.gz
2112_lane1_CAGATC_L001_R1_001.fastq.gz
2112_lane1_CAGATC_L001_R1_002.fastq.gz
2112_lane1_CAGATC_L001_R1_003.fastq.gz
2112_lane1_GCCAAT_L001_R1_001.fastq.gz
2112_lane1_GCCAAT_L001_R1_002.fastq.gz
2112_lane1_TGACCA_L001_R1_001.fastq.gz
2112_lane1_TTAGGC_L001_R1_001.fastq.gz
2112_lane1_TTAGGC_L001_R1_002.fastq.gz

---

### []()
#### Tissue: gonad
#### Illumina 100PE

zr2096_10_s1_R1.fastq.gz
zr2096_10_s1_R2.fastq.gz
zr2096_1_s1_R1.fastq.gz
zr2096_1_s1_R2.fastq.gz
zr2096_2_s1_R1.fastq.gz
zr2096_2_s1_R2.fastq.gz
zr2096_3_s1_R1.fastq.gz
zr2096_3_s1_R2.fastq.gz
zr2096_4_s1_R1.fastq.gz
zr2096_4_s1_R2.fastq.gz
zr2096_5_s1_R1.fastq.gz
zr2096_5_s1_R2.fastq.gz
zr2096_6_s1_R1.fastq.gz
zr2096_6_s1_R2.fastq.gz
zr2096_7_s1_R1.fastq.gz
zr2096_7_s1_R2.fastq.gz
zr2096_8_s1_R1.fastq.gz
zr2096_8_s1_R2.fastq.gz
zr2096_9_s1_R1.fastq.gz
zr2096_9_s1_R2.fastq.gz

---

### [Qiagen BS-seq Tests](http://onsnetwork.org/kubu4/2018/01/16/samples-submitted-c-virginica-gdna-mbd-and-mspi-to-qiagen/)
#### Tissue: mantle
#### MiSeq
#### Sequencing provided by Qiagen to test out new kit. Samples are a mix of whole genome BS-seq, RRBS, and MBD BS-seq. See notebook and nightingales spreadsheet for more info.

10_32_S32_L001_R1_001.fastq.gz
10_32_S32_L001_R2_001.fastq.gz
11_37_S37_L001_R1_001.fastq.gz
11_37_S37_L001_R2_001.fastq.gz
12_38_S38_L001_R1_001.fastq.gz
12_38_S38_L001_R2_001.fastq.gz
1_25_S25_L001_R1_001.fastq.gz
1_25_S25_L001_R2_001.fastq.gz
13_33_S33_L001_R1_001.fastq.gz
13_33_S33_L001_R2_001.fastq.gz
14_34_S34_L001_R1_001.fastq.gz
14_34_S34_L001_R2_001.fastq.gz
15_39_S39_L001_R1_001.fastq.gz
15_39_S39_L001_R2_001.fastq.gz
16_40_S40_L001_R1_001.fastq.gz
16_40_S40_L001_R2_001.fastq.gz
17_9_S9_L001_R1_001.fastq.gz
17_9_S9_L001_R2_001.fastq.gz
18_10_S10_L001_R1_001.fastq.gz
18_10_S10_L001_R2_001.fastq.gz
19_7_S7_L001_R1_001.fastq.gz
19_7_S7_L001_R2_001.fastq.gz
20_8_S8_L001_R1_001.fastq.gz
20_8_S8_L001_R2_001.fastq.gz
2_26_S26_L001_R1_001.fastq.gz
2_26_S26_L001_R2_001.fastq.gz
3_27_S27_L001_R1_001.fastq.gz
3_27_S27_L001_R2_001.fastq.gz
4_28_S28_L001_R1_001.fastq.gz
4_28_S28_L001_R2_001.fastq.gz
5_35_S35_L001_R1_001.fastq.gz
5_35_S35_L001_R2_001.fastq.gz
6_36_S36_L001_R1_001.fastq.gz
6_36_S36_L001_R2_001.fastq.gz
7_29_S29_L001_R1_001.fastq.gz
7_29_S29_L001_R2_001.fastq.gz
8_30_S30_L001_R1_001.fastq.gz
8_30_S30_L001_R2_001.fastq.gz
9_31_S31_L001_R1_001.fastq.gz
9_31_S31_L001_R2_001.fastq.gz

---

checksums.md5 - Checksums generated for sequencing files in this directory using md5 on OS X or md5sum on Ubuntu.