FastQCFastQC Report
Tue 19 May 2026
lib_212414_sample_1703716_S112_L002_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filenamelib_212414_sample_1703716_S112_L002_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10501548
Total Bases1 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACACCTACATATCTCGT963820.9177885012761929TruSeq Adapter, Index 23 (97% over 37bp)
GCGAGACTTGCGTGATAAAAAGCCCAGAAGAAGCCCAAGAAGAAGAATAC117150.11155498217977006No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACACCTACATATCGCGT109850.10460362605589195TruSeq Adapter, Index 23 (97% over 37bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)