Proteomics

November 24


Papers to discuss:
Functional genomics and proteomics of the cellular osmotic stress response in 'non-model' organisms.
J Exp Biol. 2007 May;210(Pt 9):1593-601.

Benninghoff.pdf
Toxicoproteomics - The Next Step in the Evolution of Environmental Biomarkers?
Toxicological Sciences 95(1), 1-4 (2007)

Provan et al.pdf
Mass spectrometric profiling - A diagnostic tool in fish?
Marine Environmental Research 62 (2006) S105-S108

Experimental Paper:

Proteome analysis regeneration cerebellum teleost.pdf
I know this is a long paper! If you're just getting around to reading it on Monday, focus on the methods; the discussion gets a bit long!

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Additional Papers on the Topic:
Proteomic identification and functional validation of activins and BMP-11 as candidate novel muscle mass regulators.
Mol Endocrinol. 2008 Oct 16. [Epub ahead of print]

Identification of quorum sensing-related regulons in Vibrio vulnificus by two-dimensional gel electrophoresis and differentially displayed reverse transcriptase PCR.
FEMS Immunol Med Microbiol. 2007 Jun;50(1):94-103.

Ong & Pandey.pdf
An evaluation of the use of two-dimensional gel electrophoresis in proteomics
Biomolecular Engineering 18 (2001) 195-206

Walker et al.pdf
A Proteomic (SELDI-TOF-MS) Approach to Estrogen Agonist Screening
Toxicological Sciences 95(1), 74-81 (2007)


[PDF] ►Oxidative stress and bivalves: a proteomic approach - Find UW Holdings
D Sheehan, B McDonagh - ISJ, 2008 - isj.unimo.it
... up to 70 % of ROS leading to complication of the ... there is growing interest in bivalve
genomics as a ... Several aspects of bivalve biology make oxidative stress of ...
View as HTML - Web Search

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Application of proteomics via presentation

proteomic results data starts on slide 21 - sr320 Nov 24, 2008

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Example of MS/MS output from 'spot' isolated from 2-D gel.

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more files - sr320 Feb 29, 2012

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Some real gels...

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